Miyakogusa Predicted Gene

Lj3g3v0420640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420640.1 Non Chatacterized Hit- tr|G7I8Y6|G7I8Y6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,48.76,0.00000000005,seg,NULL,
NODE_67318_length_710_cov_28.715492.path2.1
         (208 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1JTY5_SOYBN (tr|I1JTY5) Uncharacterized protein OS=Glycine max ...    57   4e-06

>I1JTY5_SOYBN (tr|I1JTY5) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 166

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 2/50 (4%)

Query: 30 KSIFSCIFQVVFMGLALLATVTSEDNKVEAPSTSSSLWCITECGTCPLIC 79
          K +FS I +  FMGLAL ATVTS + KVE P  SS L+CI++C  CP+IC
Sbjct: 8  KILFSWILKACFMGLALFATVTSSEEKVEDP--SSGLFCISDCAKCPVIC 55