Miyakogusa Predicted Gene

Lj3g3v0017520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0017520.1 tr|G7JFP1|G7JFP1_MEDTR DNA-directed RNA
polymerase OS=Medicago truncatula GN=MTR_4g009200 PE=3
SV=1,38.5,0.000000000000001,seg,NULL,CUFF.40203.1
         (156 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SLN0_MEDTR (tr|I3SLN0) Uncharacterized protein OS=Medicago tru...    92   9e-17
I1M5X8_SOYBN (tr|I1M5X8) Uncharacterized protein OS=Glycine max ...    90   3e-16
I1MCC1_SOYBN (tr|I1MCC1) Uncharacterized protein OS=Glycine max ...    87   2e-15

>I3SLN0_MEDTR (tr|I3SLN0) Uncharacterized protein OS=Medicago truncatula PE=2
           SV=1
          Length = 196

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 88/177 (49%), Gaps = 35/177 (19%)

Query: 1   MCDHDDWVNLAMADDSTVAGX---XXXXXXXXXXXXXWTVRQRRSTHKXXXXXXXXXXXX 57
           MCD+D WVNLAMA+DS VA                  WT+RQ RS               
Sbjct: 1   MCDYD-WVNLAMANDSIVANLLLHFNNPPPPPSLQLHWTIRQPRSRSIPKSESSIR---- 55

Query: 58  XLSWSGAATSVSCGANNVDSHEEESSHLTKHAG--ASRSDKVANPSETVTTKKARRKK-- 113
               +   T ++C  +   S  EES+  TK     +SRS  +ANP ETV T+  +RKK  
Sbjct: 56  ----ASPTTPLACSWSATTSASEESNLPTKLITKTSSRSKVIANPKETVITRNPKRKKTL 111

Query: 114 -------------------ELASLRITVDQQIATNESLKKMKLDLDLRQNSNTTTTS 151
                              ELASLR++V+++ ATNESLK+MKLDL+ +QNS+T+  S
Sbjct: 112 AELKEEESLLLKERINLKNELASLRLSVEKERATNESLKRMKLDLESQQNSSTSNAS 168


>I1M5X8_SOYBN (tr|I1M5X8) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 238

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 96/183 (52%), Gaps = 37/183 (20%)

Query: 1   MCDHDDWVNLAMADDSTVAGXX----XXXXXXXXXXXXWTVRQRRS-THKXXXXXXXXXX 55
           MCD D WV +AMADDS V                    WTVRQRRS +            
Sbjct: 1   MCD-DHWVKVAMADDSLVVDLLLRLHRSPPPPPCLNLHWTVRQRRSRSAHNKAESTRASP 59

Query: 56  XXXLSWSGAATSVSCGANNVDSHEEESSHLTKHAGASRSDKVANPSETVTTKKA------ 109
              LSWSGA TS S G  N+D +EE     +K +  SRS KVANPSET TT+K       
Sbjct: 60  TTPLSWSGA-TSASGG--NLDGYEE-----SKPSQTSRS-KVANPSETATTRKTRRKKTL 110

Query: 110 -------------RR--KKELASLRITVDQQIATNESLKKMKLDLDLRQNSN-TTTTSEV 153
                        RR  +KELASLR+T+ +  ATNES+K++KLD + RQNS+   T SEV
Sbjct: 111 TELKEEEDLLLKERRNLEKELASLRLTIQKHRATNESIKRLKLDFESRQNSSAAATASEV 170

Query: 154 SGK 156
           SGK
Sbjct: 171 SGK 173


>I1MCC1_SOYBN (tr|I1MCC1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 248

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 92/180 (51%), Gaps = 33/180 (18%)

Query: 5   DDWVNLAMADDSTVA-----GXXXXXXXXXXXXXXWTVRQRRS-THKXXXXXXXXXXXXX 58
           D W+ +AMADDS V                     WTVRQRRS +               
Sbjct: 4   DHWIKVAMADDSLVVDLLLRLHRPPPPPPPCLNLHWTVRQRRSRSAHNKAESTRASPTTP 63

Query: 59  LSWSGAATSVSCGANNVDSHEEESSHLTKHAGASRSDKVANPSETVTTK----------- 107
           LSWSGA TS S G  N+D +EE  S  +K    SRS KVANPSET TT+           
Sbjct: 64  LSWSGA-TSASGG--NLDGYEE-YSRPSKPTQTSRS-KVANPSETTTTRKTRRKKTLAEL 118

Query: 108 --------KARR--KKELASLRITVDQQIATNESLKKMKLDLDLRQNSN-TTTTSEVSGK 156
                   K RR  KKELA LR+TV++  ATNES+K+ KLD + RQNS+   T SEVSGK
Sbjct: 119 KAEEDLLLKERRNLKKELAFLRLTVEKHRATNESIKRKKLDFESRQNSSAAATASEVSGK 178