Miyakogusa Predicted Gene

Lj2g3v3339380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339380.1 gi|2367428|gb|AF000402.1|.path1.1
         (192 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

O22306_LOTJA (tr|O22306) Nlj21 OS=Lotus japonicus GN=LjNOD21 PE=...   140   2e-31

>O22306_LOTJA (tr|O22306) Nlj21 OS=Lotus japonicus GN=LjNOD21 PE=2 SV=1
          Length = 192

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/174 (51%), Positives = 90/174 (51%)

Query: 1   MATAQVASANSALHDDTTKASLKDHXXXXXXXXXXXXXXXXXXXSEKTKEEDSAVTEASE 60
           MATAQVASANSALHDDTTKASLKDH                   SEKTKEEDSAVTEASE
Sbjct: 1   MATAQVASANSALHDDTTKASLKDHEEKTTEQVVETQTPEPEPVSEKTKEEDSAVTEASE 60

Query: 61  PEPTEDNPSIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADPVEVQ 120
           PEPTEDNPSIEA                                        SADPVEVQ
Sbjct: 61  PEPTEDNPSIEAETTEVVEEVVTVTVTDEPKVEEKTDGEAKKEATETKETKESADPVEVQ 120

Query: 121 APEAGEEPETVTLKEDXXXXXXXXXXXXXXXXXXNTEAPDXXXXXXXLDTEGSD 174
           APEAGEEPETVTLKED                  NTEAPD       LDTEGSD
Sbjct: 121 APEAGEEPETVTLKEDASKEEEKVAEPEAKEEVVNTEAPDEKKEEEKLDTEGSD 174