Miyakogusa Predicted Gene
- Lj2g3v2599880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2599880.1 Non Chatacterized Hit- tr|K2GZJ7|K2GZJ7_9BACT
Uncharacterized protein OS=uncultured bacterium
(gcode,30.4,5e-19,FtsJ,Ribosomal RNA methyltransferase FtsJ domain;
S-adenosyl-L-methionine-dependent methyltransferas,CUFF.39135.1
(241 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7KBS2_MEDTR (tr|G7KBS2) Ribosomal RNA large subunit methyltrans... 362 8e-98
I1M849_SOYBN (tr|I1M849) Uncharacterized protein OS=Glycine max ... 337 3e-90
B9HTH2_POPTR (tr|B9HTH2) Predicted protein OS=Populus trichocarp... 335 7e-90
B9T000_RICCO (tr|B9T000) Ftsj, putative OS=Ricinus communis GN=R... 333 2e-89
M5XDC4_PRUPE (tr|M5XDC4) Uncharacterized protein OS=Prunus persi... 325 8e-87
D7TLR9_VITVI (tr|D7TLR9) Putative uncharacterized protein OS=Vit... 323 4e-86
R0GWX7_9BRAS (tr|R0GWX7) Uncharacterized protein OS=Capsella rub... 322 5e-86
Q9SXH3_ARATH (tr|Q9SXH3) FtsJ OS=Arabidopsis thaliana GN=ftsJ PE... 317 2e-84
D7M5X0_ARALL (tr|D7M5X0) Putative uncharacterized protein OS=Ara... 316 4e-84
M4CX51_BRARP (tr|M4CX51) Uncharacterized protein OS=Brassica rap... 306 3e-81
I1GLI3_BRADI (tr|I1GLI3) Uncharacterized protein OS=Brachypodium... 304 2e-80
M0TX46_MUSAM (tr|M0TX46) Uncharacterized protein OS=Musa acumina... 301 1e-79
Q10BD5_ORYSJ (tr|Q10BD5) FtsJ-like methyltransferase family prot... 276 6e-72
B8AMC5_ORYSI (tr|B8AMC5) Putative uncharacterized protein OS=Ory... 276 6e-72
M0VZG9_HORVD (tr|M0VZG9) Uncharacterized protein OS=Hordeum vulg... 272 6e-71
Q852A4_ORYSJ (tr|Q852A4) Putative FtsJ cell division protein OS=... 270 2e-70
M0VZH0_HORVD (tr|M0VZH0) Uncharacterized protein OS=Hordeum vulg... 269 5e-70
J3LU94_ORYBR (tr|J3LU94) Uncharacterized protein OS=Oryza brachy... 261 1e-67
I1PGV4_ORYGL (tr|I1PGV4) Uncharacterized protein OS=Oryza glaber... 259 4e-67
C5WUZ9_SORBI (tr|C5WUZ9) Putative uncharacterized protein Sb01g0... 259 5e-67
A9SP40_PHYPA (tr|A9SP40) Predicted protein OS=Physcomitrella pat... 251 2e-64
D8RR67_SELML (tr|D8RR67) Putative uncharacterized protein OS=Sel... 233 3e-59
M0VZH2_HORVD (tr|M0VZH2) Uncharacterized protein OS=Hordeum vulg... 227 3e-57
N1QVU4_AEGTA (tr|N1QVU4) Ribosomal RNA large subunit methyltrans... 188 1e-45
I3SG66_MEDTR (tr|I3SG66) Uncharacterized protein OS=Medicago tru... 187 2e-45
A8INI6_CHLRE (tr|A8INI6) Predicted protein OS=Chlamydomonas rein... 169 8e-40
E1Z372_CHLVA (tr|E1Z372) Putative uncharacterized protein (Fragm... 163 6e-38
C1N352_MICPC (tr|C1N352) Predicted protein OS=Micromonas pusilla... 162 6e-38
I0Z088_9CHLO (tr|I0Z088) 23S ribosomal RNA methyltransferase OS=... 162 1e-37
D3TIB9_MANIN (tr|D3TIB9) Methyl transferase (Fragment) OS=Mangif... 155 1e-35
C1E350_MICSR (tr|C1E350) Predicted protein (Fragment) OS=Micromo... 153 4e-35
B7E4J1_ORYSJ (tr|B7E4J1) cDNA clone:006-305-A03, full insert seq... 146 5e-33
M0VZH1_HORVD (tr|M0VZH1) Uncharacterized protein OS=Hordeum vulg... 146 7e-33
Q01CK1_OSTTA (tr|Q01CK1) Elongation factor P (ISS) OS=Ostreococc... 143 4e-32
L9X2B9_9EURY (tr|L9X2B9) Ribosomal RNA large subunit methyltrans... 124 2e-26
M1WJM4_DESPC (tr|M1WJM4) Ribosomal RNA large subunit methyltrans... 122 8e-26
L9WEP4_9EURY (tr|L9WEP4) Ribosomal RNA large subunit methyltrans... 122 1e-25
F8D3F4_HALXS (tr|F8D3F4) Ribosomal RNA large subunit methyltrans... 121 2e-25
M0PJN4_9EURY (tr|M0PJN4) Ribosomal RNA large subunit methyltrans... 120 3e-25
L9WHL7_9EURY (tr|L9WHL7) Ribosomal RNA large subunit methyltrans... 120 5e-25
D2RTM3_HALTV (tr|D2RTM3) Ribosomal RNA large subunit methyltrans... 118 1e-24
M0CJQ7_9EURY (tr|M0CJQ7) Ribosomal RNA large subunit methyltrans... 118 1e-24
M0DNJ5_9EURY (tr|M0DNJ5) Ribosomal RNA large subunit methyltrans... 118 2e-24
L0AFW7_NATGS (tr|L0AFW7) Ribosomal RNA large subunit methyltrans... 118 2e-24
I7BST0_NATSJ (tr|I7BST0) Ribosomal RNA large subunit methyltrans... 117 2e-24
L0K4X2_9EURY (tr|L0K4X2) Ribosomal RNA large subunit methyltrans... 116 7e-24
M0NV44_9EURY (tr|M0NV44) Ribosomal RNA large subunit methyltrans... 116 7e-24
L9YZ98_9EURY (tr|L9YZ98) Ribosomal RNA large subunit methyltrans... 116 7e-24
D3TAK8_ACIB4 (tr|D3TAK8) Ribosomal RNA large subunit methyltrans... 116 7e-24
M0LW67_9EURY (tr|M0LW67) Ribosomal RNA large subunit methyltrans... 116 7e-24
M0NXP8_9EURY (tr|M0NXP8) Ribosomal RNA large subunit methyltrans... 116 8e-24
E6VW50_DESAO (tr|E6VW50) Ribosomal RNA large subunit methyltrans... 115 9e-24
F7PK64_9EURY (tr|F7PK64) Ribosomal RNA large subunit methyltrans... 115 1e-23
F0JBC1_DESDE (tr|F0JBC1) Ribosomal RNA large subunit methyltrans... 115 1e-23
C7P5L8_METFA (tr|C7P5L8) Ribosomal RNA large subunit methyltrans... 115 1e-23
D3S884_METSF (tr|D3S884) Ribosomal RNA large subunit methyltrans... 115 1e-23
L9ZGP1_9EURY (tr|L9ZGP1) Ribosomal RNA large subunit methyltrans... 115 2e-23
L9VG57_9EURY (tr|L9VG57) Ribosomal RNA large subunit methyltrans... 114 2e-23
M0AGG8_NATA1 (tr|M0AGG8) Ribosomal RNA large subunit methyltrans... 114 3e-23
L9ZT46_9EURY (tr|L9ZT46) Ribosomal RNA large subunit methyltrans... 114 3e-23
L9XYL9_9EURY (tr|L9XYL9) Ribosomal RNA large subunit methyltrans... 113 5e-23
M0NTZ4_9EURY (tr|M0NTZ4) Ribosomal RNA large subunit methyltrans... 113 5e-23
M0F6C1_9EURY (tr|M0F6C1) Ribosomal RNA large subunit methyltrans... 113 5e-23
M0EJJ1_9EURY (tr|M0EJJ1) Ribosomal RNA large subunit methyltrans... 113 5e-23
M0LM50_9EURY (tr|M0LM50) Ribosomal RNA large subunit methyltrans... 113 5e-23
M0PRC0_9EURY (tr|M0PRC0) Ribosomal RNA large subunit methyltrans... 113 6e-23
L9YWG8_9EURY (tr|L9YWG8) Ribosomal RNA large subunit methyltrans... 112 7e-23
L0JGV1_NATP1 (tr|L0JGV1) Ribosomal RNA large subunit methyltrans... 112 8e-23
M0B844_9EURY (tr|M0B844) Ribosomal RNA large subunit methyltrans... 112 8e-23
L9XF06_9EURY (tr|L9XF06) Ribosomal RNA large subunit methyltrans... 112 9e-23
M5PV51_DESAF (tr|M5PV51) 23S rRNA 2'-O-methyltransferase OS=Desu... 112 1e-22
M0DHT4_9EURY (tr|M0DHT4) Ribosomal RNA large subunit methyltrans... 112 1e-22
L9XTT0_9EURY (tr|L9XTT0) Ribosomal RNA large subunit methyltrans... 112 1e-22
M0C1D5_9EURY (tr|M0C1D5) Ribosomal RNA large subunit methyltrans... 112 2e-22
L0HPX9_ACIS0 (tr|L0HPX9) Ribosomal RNA large subunit methyltrans... 111 2e-22
C7NRM8_HALUD (tr|C7NRM8) Ribosomal RNA large subunit methyltrans... 111 2e-22
M0IED3_9EURY (tr|M0IED3) Ribosomal RNA large subunit methyltrans... 111 2e-22
M0GVV9_9EURY (tr|M0GVV9) Ribosomal RNA large subunit methyltrans... 111 2e-22
F8C2F7_THESO (tr|F8C2F7) Ribosomal RNA large subunit methyltrans... 110 3e-22
L0IF14_HALRX (tr|L0IF14) Ribosomal RNA large subunit methyltrans... 110 3e-22
G0LFR1_HALWC (tr|G0LFR1) Ribosomal RNA large subunit methyltrans... 110 3e-22
M0BHM9_9EURY (tr|M0BHM9) Ribosomal RNA large subunit methyltrans... 110 5e-22
D8F3Q4_9DELT (tr|D8F3Q4) Ribosomal RNA large subunit methyltrans... 110 5e-22
F3YV56_DESAF (tr|F3YV56) Ribosomal RNA large subunit methyltrans... 110 5e-22
I3R109_HALMT (tr|I3R109) Ribosomal RNA large subunit methyltrans... 109 9e-22
G4IBS6_9EURY (tr|G4IBS6) Ribosomal RNA large subunit methyltrans... 109 1e-21
M0CBB8_9EURY (tr|M0CBB8) Ribosomal RNA large subunit methyltrans... 108 1e-21
M0MGA2_9EURY (tr|M0MGA2) Ribosomal RNA large subunit methyltrans... 108 2e-21
C9RGY4_METVM (tr|C9RGY4) Ribosomal RNA large subunit methyltrans... 108 2e-21
E1QM08_DESB2 (tr|E1QM08) Ribosomal RNA large subunit methyltrans... 108 2e-21
M0HW13_9EURY (tr|M0HW13) Ribosomal RNA large subunit methyltrans... 108 2e-21
F2KNN6_ARCVS (tr|F2KNN6) Ribosomal RNA large subunit methyltrans... 108 2e-21
D6SRF7_9DELT (tr|D6SRF7) Ribosomal RNA large subunit methyltrans... 107 2e-21
L0GWY0_9GAMM (tr|L0GWY0) Ribosomal RNA large subunit methyltrans... 107 3e-21
E8RD49_DESPD (tr|E8RD49) Ribosomal RNA large subunit methyltrans... 107 3e-21
D2RI97_ARCPA (tr|D2RI97) Ribosomal RNA large subunit methyltrans... 107 5e-21
D3RZF4_FERPA (tr|D3RZF4) Ribosomal RNA large subunit methyltrans... 106 7e-21
L0RF48_9DELT (tr|L0RF48) Ribosomal RNA large subunit methyltrans... 106 7e-21
E7QN38_9EURY (tr|E7QN38) Ribosomal RNA large subunit methyltrans... 106 8e-21
M0DA32_9EURY (tr|M0DA32) Ribosomal RNA large subunit methyltrans... 105 1e-20
L9ZUZ6_9EURY (tr|L9ZUZ6) Ribosomal RNA large subunit methyltrans... 105 1e-20
I5AZJ9_9DELT (tr|I5AZJ9) Ribosomal RNA large subunit methyltrans... 105 2e-20
M0GNW7_9EURY (tr|M0GNW7) Ribosomal RNA large subunit methyltrans... 105 2e-20
R4W7M8_9EURY (tr|R4W7M8) 23S rRNA methyltransferase J OS=Salinar... 105 2e-20
D3SVL0_NATMM (tr|D3SVL0) Ribosomal RNA large subunit methyltrans... 104 2e-20
H6Q585_WIGGL (tr|H6Q585) Ribosomal RNA large subunit methyltrans... 104 2e-20
E4TJU0_CALNY (tr|E4TJU0) Ribosomal RNA large subunit methyltrans... 104 3e-20
M0FZT1_9EURY (tr|M0FZT1) Ribosomal RNA large subunit methyltrans... 104 3e-20
M0FV29_9EURY (tr|M0FV29) Ribosomal RNA large subunit methyltrans... 104 3e-20
M0FH68_9EURY (tr|M0FH68) Ribosomal RNA large subunit methyltrans... 104 3e-20
M0M844_9EURY (tr|M0M844) Ribosomal RNA large subunit methyltrans... 103 3e-20
M0HHF1_9EURY (tr|M0HHF1) Ribosomal RNA large subunit methyltrans... 103 3e-20
G7WPQ5_METH6 (tr|G7WPQ5) Ribosomal RNA large subunit methyltrans... 103 4e-20
M4YQ38_9EURY (tr|M4YQ38) 23S rRNA Um-2552 2'-O-methyltransferase... 103 4e-20
M0N598_9EURY (tr|M0N598) Ribosomal RNA large subunit methyltrans... 103 4e-20
M0J9T5_9EURY (tr|M0J9T5) Ribosomal RNA large subunit methyltrans... 103 4e-20
M0I5L2_9EURY (tr|M0I5L2) Ribosomal RNA large subunit methyltrans... 103 4e-20
M0GF30_HALL2 (tr|M0GF30) Ribosomal RNA large subunit methyltrans... 103 4e-20
L5NUU3_9EURY (tr|L5NUU3) Ribosomal RNA large subunit methyltrans... 103 4e-20
M0B7G4_9EURY (tr|M0B7G4) Ribosomal RNA large subunit methyltrans... 103 4e-20
G2MN58_9ARCH (tr|G2MN58) Ribosomal RNA large subunit methyltrans... 103 4e-20
E4NRH2_HALBP (tr|E4NRH2) Ribosomal RNA large subunit methyltrans... 103 4e-20
M0I0S7_9EURY (tr|M0I0S7) Ribosomal RNA large subunit methyltrans... 103 5e-20
M0DSJ1_9EURY (tr|M0DSJ1) Ribosomal RNA large subunit methyltrans... 103 5e-20
E1YIH9_9DELT (tr|E1YIH9) Ribosomal RNA large subunit methyltrans... 103 6e-20
H1L056_9EURY (tr|H1L056) Ribosomal RNA large subunit methyltrans... 103 6e-20
K0IMJ8_NITGG (tr|K0IMJ8) Ribosomal RNA large subunit methyltrans... 103 7e-20
J1APN2_9EURY (tr|J1APN2) Ribosomal RNA large subunit methyltrans... 103 7e-20
M0NBC1_9EURY (tr|M0NBC1) Ribosomal RNA large subunit methyltrans... 102 8e-20
M0FG20_9EURY (tr|M0FG20) Ribosomal RNA large subunit methyltrans... 102 8e-20
L9K9K5_9DELT (tr|L9K9K5) Ribosomal RNA large subunit methyltrans... 102 8e-20
J3EXE4_9EURY (tr|J3EXE4) Ribosomal RNA large subunit methyltrans... 102 1e-19
A4A9Y2_9GAMM (tr|A4A9Y2) Ribosomal RNA large subunit methyltrans... 102 1e-19
K0NFN1_DESTT (tr|K0NFN1) Ribosomal RNA large subunit methyltrans... 102 2e-19
D4GZC4_HALVD (tr|D4GZC4) Ribosomal RNA large subunit methyltrans... 101 2e-19
D5VAK5_MORCR (tr|D5VAK5) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1XE17_MORCA (tr|F1XE17) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1XA93_MORCA (tr|F1XA93) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1X5M6_MORCA (tr|F1X5M6) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1WYN4_MORCA (tr|F1WYN4) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1WRJ6_MORCA (tr|F1WRJ6) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1WMN2_MORCA (tr|F1WMN2) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1WHY9_MORCA (tr|F1WHY9) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1WBF9_MORCA (tr|F1WBF9) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1W869_MORCA (tr|F1W869) Ribosomal RNA large subunit methyltrans... 101 2e-19
F1VPC7_MORCA (tr|F1VPC7) Ribosomal RNA large subunit methyltrans... 101 2e-19
A6G3Z4_9DELT (tr|A6G3Z4) Ribosomal RNA large subunit methyltrans... 101 2e-19
M4V980_9DELT (tr|M4V980) Cell division protein FtsJ OS=Bdellovib... 101 2e-19
C7LQQ5_DESBD (tr|C7LQQ5) Ribosomal RNA large subunit methyltrans... 101 2e-19
M0D370_9EURY (tr|M0D370) Ribosomal RNA large subunit methyltrans... 101 2e-19
D5VRJ2_METIM (tr|D5VRJ2) Ribosomal RNA large subunit methyltrans... 101 2e-19
Q1NVI8_9DELT (tr|Q1NVI8) Ribosomal RNA large subunit methyltrans... 101 2e-19
C6YSA5_9GAMM (tr|C6YSA5) Ribosomal RNA large subunit methyltrans... 100 3e-19
M0ESR5_9EURY (tr|M0ESR5) Ribosomal RNA large subunit methyltrans... 100 3e-19
M0EA89_9EURY (tr|M0EA89) Ribosomal RNA large subunit methyltrans... 100 4e-19
F7XPT7_METZD (tr|F7XPT7) Ribosomal RNA large subunit methyltrans... 100 4e-19
B6WY74_9DELT (tr|B6WY74) Ribosomal RNA large subunit methyltrans... 100 4e-19
K6GES9_9DELT (tr|K6GES9) Ribosomal RNA large subunit methyltrans... 100 5e-19
K2B5B6_9BACT (tr|K2B5B6) Ribosomal RNA large subunit methyltrans... 100 5e-19
K2GZJ7_9BACT (tr|K2GZJ7) Ribosomal RNA large subunit methyltrans... 100 5e-19
D7DSH4_METV3 (tr|D7DSH4) Ribosomal RNA large subunit methyltrans... 100 6e-19
M0MHN0_HALMO (tr|M0MHN0) Ribosomal RNA large subunit methyltrans... 100 6e-19
D8J5Y9_HALJB (tr|D8J5Y9) Ribosomal RNA large subunit methyltrans... 100 6e-19
K1ZMF3_9BACT (tr|K1ZMF3) Ribosomal RNA large subunit methyltrans... 100 7e-19
F6BBX8_METIK (tr|F6BBX8) Ribosomal RNA large subunit methyltrans... 100 7e-19
K2FTP1_9BACT (tr|K2FTP1) Ribosomal RNA large subunit methyltrans... 100 7e-19
N6Z6R5_9RHOO (tr|N6Z6R5) 23S rRNA methyltransferase J OS=Thauera... 100 8e-19
M4K9R5_9PSED (tr|M4K9R5) 23S rRNA methyltransferase J OS=Pseudom... 99 8e-19
L7HDL1_PSEFL (tr|L7HDL1) Ribosomal RNA large subunit methyltrans... 99 8e-19
D0LT48_HALO1 (tr|D0LT48) Ribosomal RNA large subunit methyltrans... 99 1e-18
I2BW22_PSEFL (tr|I2BW22) Ribosomal RNA large subunit methyltrans... 99 1e-18
B7S0C3_9GAMM (tr|B7S0C3) Ribosomal RNA large subunit methyltrans... 99 2e-18
F8ANX3_METOI (tr|F8ANX3) Ribosomal RNA large subunit methyltrans... 98 2e-18
K2GWA3_9BACT (tr|K2GWA3) Ribosomal RNA large subunit methyltrans... 98 2e-18
G0HQX2_HALHT (tr|G0HQX2) Ribosomal RNA large subunit methyltrans... 98 2e-18
G0H4D7_METMI (tr|G0H4D7) Ribosomal RNA large subunit methyltrans... 98 2e-18
I4L3P6_9PSED (tr|I4L3P6) Ribosomal RNA large subunit methyltrans... 98 2e-18
I4K879_PSEFL (tr|I4K879) Ribosomal RNA large subunit methyltrans... 98 2e-18
R9DXI6_PISSA (tr|R9DXI6) FtsJ-like methyltransferase family prot... 98 2e-18
M0L0L3_9EURY (tr|M0L0L3) Ribosomal RNA large subunit methyltrans... 98 3e-18
M0LSH4_HALJP (tr|M0LSH4) Ribosomal RNA large subunit methyltrans... 98 3e-18
M0KWZ1_9EURY (tr|M0KWZ1) Ribosomal RNA large subunit methyltrans... 98 3e-18
M0JP44_HALVA (tr|M0JP44) Ribosomal RNA large subunit methyltrans... 97 4e-18
G2FGC7_9GAMM (tr|G2FGC7) Ribosomal RNA large subunit methyltrans... 97 4e-18
G2DDC1_9GAMM (tr|G2DDC1) Ribosomal RNA large subunit methyltrans... 97 4e-18
E1K1V8_DESFR (tr|E1K1V8) Ribosomal RNA large subunit methyltrans... 97 4e-18
M0K3I7_9EURY (tr|M0K3I7) Ribosomal RNA large subunit methyltrans... 97 5e-18
I7J8G6_METBM (tr|I7J8G6) Ribosomal RNA large subunit methyltrans... 97 5e-18
F4BXV5_METCG (tr|F4BXV5) Ribosomal RNA large subunit methyltrans... 97 5e-18
R5ZTR9_9PROT (tr|R5ZTR9) Ribosomal RNA large subunit methyltrans... 97 5e-18
F3QH33_9BURK (tr|F3QH33) Ribosomal RNA large subunit methyltrans... 97 5e-18
D9Y392_9BURK (tr|D9Y392) Ribosomal RNA large subunit methyltrans... 97 5e-18
H5SGR6_9GAMM (tr|H5SGR6) Ribosomal RNA large subunit methyltrans... 97 6e-18
C4ZKH1_THASP (tr|C4ZKH1) Ribosomal RNA large subunit methyltrans... 97 6e-18
N6Y4C5_9RHOO (tr|N6Y4C5) 23S rRNA methyltransferase J OS=Thauera... 97 6e-18
I2JIW1_9GAMM (tr|I2JIW1) Ribosomal RNA large subunit methyltrans... 97 7e-18
F8CK38_MYXFH (tr|F8CK38) Ribosomal RNA large subunit methyltrans... 96 7e-18
K2AFR6_9BACT (tr|K2AFR6) Ribosomal RNA large subunit methyltrans... 96 7e-18
C8X3N6_DESRD (tr|C8X3N6) Ribosomal RNA large subunit methyltrans... 96 7e-18
H8I669_METCZ (tr|H8I669) Ribosomal RNA large subunit methyltrans... 96 8e-18
M9SLU0_9EURY (tr|M9SLU0) Cell division protein FtsJ / Ribosomal ... 96 1e-17
N6ZF04_9RHOO (tr|N6ZF04) 23S rRNA methyltransferase J OS=Thauera... 96 1e-17
N6Y1T1_9RHOO (tr|N6Y1T1) 23S rRNA methyltransferase J OS=Thauera... 96 1e-17
N6ZQY6_9RHOO (tr|N6ZQY6) 23S rRNA methyltransferase J OS=Thauera... 96 1e-17
N6YID8_9RHOO (tr|N6YID8) 23S rRNA methyltransferase J OS=Thauera... 96 1e-17
M5GFL5_DACSP (tr|M5GFL5) 23S ribosomal RNA methyltransferase OS=... 96 1e-17
F8GJL8_NITSI (tr|F8GJL8) Ribosomal RNA large subunit methyltrans... 96 1e-17
R7Q1M1_9EURY (tr|R7Q1M1) Ribosomal RNA large subunit methyltrans... 96 1e-17
B8KN15_9GAMM (tr|B8KN15) Ribosomal RNA large subunit methyltrans... 96 1e-17
L8DBM8_9GAMM (tr|L8DBM8) Ribosomal RNA large subunit methyltrans... 96 1e-17
K7Z995_BDEBC (tr|K7Z995) Ribosomal RNA large subunit methyltrans... 96 1e-17
D6Z2Y2_DESAT (tr|D6Z2Y2) Ribosomal RNA large subunit methyltrans... 95 2e-17
B6JWE6_SCHJY (tr|B6JWE6) AdoMet-dependent rRNA methyltransferase... 95 2e-17
F2NI71_DESAR (tr|F2NI71) Ribosomal RNA large subunit methyltrans... 95 2e-17
I3Y7K6_THIV6 (tr|I3Y7K6) Ribosomal RNA large subunit methyltrans... 95 2e-17
I1XMQ6_METNJ (tr|I1XMQ6) Ribosomal RNA large subunit methyltrans... 95 2e-17
E3FIB6_STIAD (tr|E3FIB6) Ribosomal RNA large subunit methyltrans... 95 2e-17
D7E8N8_METEZ (tr|D7E8N8) Ribosomal RNA large subunit methyltrans... 95 2e-17
G4TLZ7_PIRID (tr|G4TLZ7) Probable SPB1-required for ribosome syn... 95 2e-17
D8MB46_BLAHO (tr|D8MB46) Singapore isolate B (sub-type 7) whole ... 95 2e-17
A0Z551_9GAMM (tr|A0Z551) Ribosomal RNA large subunit methyltrans... 95 3e-17
F9UBY5_9GAMM (tr|F9UBY5) Ribosomal RNA large subunit methyltrans... 94 3e-17
K2RRP1_METFO (tr|K2RRP1) Ribosomal RNA large subunit methyltrans... 94 3e-17
L9PSM0_9BURK (tr|L9PSM0) Ribosomal RNA large subunit methyltrans... 94 3e-17
M7WQD5_RHOTO (tr|M7WQD5) AdoMet-dependent rRNA methyltransferase... 94 3e-17
C8PXU6_9GAMM (tr|C8PXU6) Ribosomal RNA large subunit methyltrans... 94 4e-17
D2ZMV8_METSM (tr|D2ZMV8) Ribosomal RNA large subunit methyltrans... 94 4e-17
D1JE10_9ARCH (tr|D1JE10) Ribosomal RNA large subunit methyltrans... 94 4e-17
G8QQW6_SPHPG (tr|G8QQW6) Ribosomal RNA large subunit methyltrans... 94 5e-17
K1YVP7_9BACT (tr|K1YVP7) Ribosomal RNA large subunit methyltrans... 94 5e-17
M5FW47_DACSP (tr|M5FW47) FtsJ-domain-containing protein OS=Dacry... 94 5e-17
D3E1N3_METRM (tr|D3E1N3) Ribosomal RNA large subunit methyltrans... 94 5e-17
D1YZT5_METPS (tr|D1YZT5) Ribosomal RNA large subunit methyltrans... 94 6e-17
L0KTW2_METHD (tr|L0KTW2) Ribosomal RNA large subunit methyltrans... 93 6e-17
L7UA33_MYXSD (tr|L7UA33) Ribosomal RNA large subunit methyltrans... 93 7e-17
M2Y4K0_GALSU (tr|M2Y4K0) FtsJ-like methyltransferase family prot... 93 7e-17
F5R828_9RHOO (tr|F5R828) Ribosomal RNA large subunit methyltrans... 93 8e-17
E3GY92_METFV (tr|E3GY92) Ribosomal RNA large subunit methyltrans... 93 8e-17
C7P1D9_HALMD (tr|C7P1D9) Ribosomal RNA large subunit methyltrans... 93 8e-17
F4DVW2_PSEMN (tr|F4DVW2) Ribosomal RNA large subunit methyltrans... 93 8e-17
G7DT39_MIXOS (tr|G7DT39) Uncharacterized protein OS=Mixia osmund... 93 9e-17
K6TXS0_9EURY (tr|K6TXS0) Ribosomal RNA large subunit methyltrans... 92 1e-16
C4XIK2_DESMR (tr|C4XIK2) Ribosomal RNA large subunit methyltrans... 92 1e-16
F9ZF04_9PROT (tr|F9ZF04) Ribosomal RNA large subunit methyltrans... 92 1e-16
H0PW39_9RHOO (tr|H0PW39) Ribosomal RNA large subunit methyltrans... 92 1e-16
M7NZL1_9GAMM (tr|M7NZL1) Cell division protein FtsJ / Ribosomal ... 92 2e-16
H8GR70_METAL (tr|H8GR70) Ribosomal RNA large subunit methyltrans... 92 2e-16
M1T2T5_9PROT (tr|M1T2T5) Ribosomal RNA large subunit methyltrans... 92 2e-16
D9PUQ3_METTM (tr|D9PUQ3) Ribosomal RNA large subunit methyltrans... 91 2e-16
E4PGS0_MARAH (tr|E4PGS0) Ribosomal RNA large subunit methyltrans... 91 2e-16
B9AGS7_METSM (tr|B9AGS7) Ribosomal RNA large subunit methyltrans... 91 2e-16
J2KCD2_9DELT (tr|J2KCD2) Ribosomal RNA large subunit methyltrans... 91 3e-16
G6YSN2_9ALTE (tr|G6YSN2) Ribosomal RNA large subunit methyltrans... 91 3e-16
R7PXI3_9EURY (tr|R7PXI3) Ribosomal RNA large subunit methyltrans... 91 3e-16
C4GGL6_9NEIS (tr|C4GGL6) Ribosomal RNA large subunit methyltrans... 91 4e-16
K3WH48_PYTUL (tr|K3WH48) Uncharacterized protein OS=Pythium ulti... 91 4e-16
I0DVA6_PROSM (tr|I0DVA6) Ribosomal RNA large subunit methyltrans... 91 4e-16
B2Q4V8_PROST (tr|B2Q4V8) Ribosomal RNA large subunit methyltrans... 91 4e-16
N9NDZ2_9GAMM (tr|N9NDZ2) Ribosomal RNA large subunit methyltrans... 91 4e-16
I4ZRS8_9GAMM (tr|I4ZRS8) Ribosomal RNA large subunit methyltrans... 91 4e-16
A0E834_PARTE (tr|A0E834) Chromosome undetermined scaffold_82, wh... 90 5e-16
D8M3B6_BLAHO (tr|D8M3B6) Singapore isolate B (sub-type 7) whole ... 90 5e-16
L5UZP9_NEIME (tr|L5UZP9) Ribosomal RNA large subunit methyltrans... 90 6e-16
I3I7B6_9GAMM (tr|I3I7B6) Ribosomal RNA large subunit methyltrans... 90 6e-16
K4MLZ4_9EURY (tr|K4MLZ4) Ribosomal RNA large subunit methyltrans... 90 6e-16
D0W4T2_NEICI (tr|D0W4T2) Ribosomal RNA large subunit methyltrans... 90 6e-16
E2PDP8_NEIPO (tr|E2PDP8) Ribosomal RNA large subunit methyltrans... 90 7e-16
F3KVQ8_9BURK (tr|F3KVQ8) Ribosomal RNA large subunit methyltrans... 90 7e-16
C6NUK9_9GAMM (tr|C6NUK9) Ribosomal RNA large subunit methyltrans... 90 8e-16
M5DPN8_9PROT (tr|M5DPN8) Cell division protein FtsJ / Ribosomal ... 90 8e-16
I4E6Q8_NEIME (tr|I4E6Q8) Ribosomal RNA large subunit methyltrans... 90 8e-16
H3NS24_9GAMM (tr|H3NS24) Ribosomal RNA large subunit methyltrans... 89 8e-16
N9MEN8_9GAMM (tr|N9MEN8) Ribosomal RNA large subunit methyltrans... 89 9e-16
N8WSP7_9GAMM (tr|N8WSP7) Ribosomal RNA large subunit methyltrans... 89 9e-16
C3X1N9_OXAFO (tr|C3X1N9) Ribosomal RNA large subunit methyltrans... 89 9e-16
D8PQQ8_SCHCM (tr|D8PQQ8) Putative uncharacterized protein OS=Sch... 89 9e-16
M7WG90_RHOTO (tr|M7WG90) Ribosomal RNA assembly protein mis3 OS=... 89 9e-16
F9ZSU2_ACICS (tr|F9ZSU2) Ribosomal RNA large subunit methyltrans... 89 1e-15
N8Z5P0_9GAMM (tr|N8Z5P0) Ribosomal RNA large subunit methyltrans... 89 1e-15
A8N1R5_COPC7 (tr|A8N1R5) RNA methyltransferase OS=Coprinopsis ci... 89 1e-15
F0EW67_9NEIS (tr|F0EW67) Ribosomal RNA large subunit methyltrans... 89 1e-15
C0B0H0_9ENTR (tr|C0B0H0) Ribosomal RNA large subunit methyltrans... 89 1e-15
K8X9Z9_9ENTR (tr|K8X9Z9) Ribosomal RNA large subunit methyltrans... 89 2e-15
B6XCI8_9ENTR (tr|B6XCI8) Ribosomal RNA large subunit methyltrans... 89 2e-15
N8WLW7_9GAMM (tr|N8WLW7) Ribosomal RNA large subunit methyltrans... 89 2e-15
F2K059_MARM1 (tr|F2K059) Ribosomal RNA large subunit methyltrans... 89 2e-15
K7Z602_9PROT (tr|K7Z602) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1P2P0_9ENTR (tr|D1P2P0) Ribosomal RNA large subunit methyltrans... 88 2e-15
E1VHZ8_9GAMM (tr|E1VHZ8) Ribosomal RNA large subunit methyltrans... 88 2e-15
F8A834_THEID (tr|F8A834) Ribosomal RNA large subunit methyltrans... 88 2e-15
K8WRE1_PRORE (tr|K8WRE1) Ribosomal RNA large subunit methyltrans... 88 2e-15
D4C3R3_PRORE (tr|D4C3R3) Ribosomal RNA large subunit methyltrans... 88 2e-15
E8SM32_NEIGO (tr|E8SM32) Ribosomal RNA large subunit methyltrans... 88 2e-15
D6H9A5_NEIGO (tr|D6H9A5) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1EE85_NEIGO (tr|D1EE85) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1E7U2_NEIGO (tr|D1E7U2) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1E1G5_NEIGO (tr|D1E1G5) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1DN51_NEIGO (tr|D1DN51) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1DBN5_NEIGO (tr|D1DBN5) Ribosomal RNA large subunit methyltrans... 88 2e-15
D1D4Q4_NEIGO (tr|D1D4Q4) Ribosomal RNA large subunit methyltrans... 88 2e-15
C1HWE5_NEIGO (tr|C1HWE5) Ribosomal RNA large subunit methyltrans... 88 2e-15
K1GSP0_PROMI (tr|K1GSP0) Ribosomal RNA large subunit methyltrans... 88 3e-15
K1GP78_PROMI (tr|K1GP78) Ribosomal RNA large subunit methyltrans... 88 3e-15
C2LKF3_PROMI (tr|C2LKF3) Ribosomal RNA large subunit methyltrans... 88 3e-15
B8JFS7_ANAD2 (tr|B8JFS7) Ribosomal RNA large subunit methyltrans... 88 3e-15
B4UGQ7_ANASK (tr|B4UGQ7) Ribosomal RNA large subunit methyltrans... 88 3e-15
M1GCV5_LAWIN (tr|M1GCV5) Ribosomal RNA large subunit methyltrans... 87 3e-15
C3XAB0_OXAFO (tr|C3XAB0) Ribosomal RNA large subunit methyltrans... 87 4e-15
G2IZD6_PSEUL (tr|G2IZD6) Ribosomal RNA large subunit methyltrans... 87 4e-15
C9YA68_9BURK (tr|C9YA68) Ribosomal RNA large subunit methyltrans... 87 4e-15
B9YZE0_9NEIS (tr|B9YZE0) Ribosomal RNA large subunit methyltrans... 87 4e-15
D6CU31_THIS3 (tr|D6CU31) Ribosomal RNA large subunit methyltrans... 87 4e-15
F4RPE0_MELLP (tr|F4RPE0) Putative uncharacterized protein OS=Mel... 87 4e-15
F8Q2T7_SERL3 (tr|F8Q2T7) Putative uncharacterized protein OS=Ser... 87 5e-15
N8TX51_9GAMM (tr|N8TX51) Ribosomal RNA large subunit methyltrans... 87 5e-15
M3A6Y3_9PROT (tr|M3A6Y3) Ribosomal RNA large subunit methyltrans... 87 5e-15
F0N625_NEIMN (tr|F0N625) Ribosomal RNA large subunit methyltrans... 87 6e-15
F0N2Z6_NEIMO (tr|F0N2Z6) Ribosomal RNA large subunit methyltrans... 87 6e-15
F0MT00_NEIMM (tr|F0MT00) Ribosomal RNA large subunit methyltrans... 87 6e-15
F0MGS1_NEIMG (tr|F0MGS1) Ribosomal RNA large subunit methyltrans... 87 6e-15
E7BG75_NEIMW (tr|E7BG75) Ribosomal RNA large subunit methyltrans... 87 6e-15
E6N0E1_NEIMH (tr|E6N0E1) Ribosomal RNA large subunit methyltrans... 87 6e-15
E3D3F7_NEIM7 (tr|E3D3F7) Ribosomal RNA large subunit methyltrans... 87 6e-15
C9X0B7_NEIM8 (tr|C9X0B7) Ribosomal RNA large subunit methyltrans... 87 6e-15
R0YP78_NEIME (tr|R0YP78) FtsJ-like methyltransferase family prot... 87 6e-15
R0YIN3_NEIME (tr|R0YIN3) FtsJ-like methyltransferase family prot... 87 6e-15
R0XLF8_NEIME (tr|R0XLF8) FtsJ-like methyltransferase family prot... 87 6e-15
R0WII0_NEIME (tr|R0WII0) FtsJ-like methyltransferase family prot... 87 6e-15
R0VZK8_NEIME (tr|R0VZK8) FtsJ-like methyltransferase family prot... 87 6e-15
R0VVU8_NEIME (tr|R0VVU8) FtsJ-like methyltransferase family prot... 87 6e-15
R0VDC2_NEIME (tr|R0VDC2) FtsJ-like methyltransferase family prot... 87 6e-15
R0U6S0_NEIME (tr|R0U6S0) FtsJ-like methyltransferase family prot... 87 6e-15
R0TLY0_NEIME (tr|R0TLY0) FtsJ-like methyltransferase family prot... 87 6e-15
R0TC91_NEIME (tr|R0TC91) FtsJ-like methyltransferase family prot... 87 6e-15
R0TBF0_NEIME (tr|R0TBF0) FtsJ-like methyltransferase family prot... 87 6e-15
R0SM87_NEIME (tr|R0SM87) FtsJ-like methyltransferase family prot... 87 6e-15
R0SBU6_NEIME (tr|R0SBU6) FtsJ-like methyltransferase family prot... 87 6e-15
R0S5N2_NEIME (tr|R0S5N2) FtsJ-like methyltransferase family prot... 87 6e-15
R0S2I9_NEIME (tr|R0S2I9) FtsJ-like methyltransferase family prot... 87 6e-15
R0RGY1_NEIME (tr|R0RGY1) FtsJ-like methyltransferase family prot... 87 6e-15
R0RDE1_NEIME (tr|R0RDE1) FtsJ-like methyltransferase family prot... 87 6e-15
R0RCM8_NEIME (tr|R0RCM8) FtsJ-like methyltransferase family prot... 87 6e-15
R0R7A7_NEIME (tr|R0R7A7) FtsJ-like methyltransferase family prot... 87 6e-15
R0R5U6_NEIME (tr|R0R5U6) FtsJ-like methyltransferase family prot... 87 6e-15
R0QWF1_NEIME (tr|R0QWF1) FtsJ-like methyltransferase family prot... 87 6e-15
R0QVV3_NEIME (tr|R0QVV3) FtsJ-like methyltransferase family prot... 87 6e-15
R0QPA3_NEIME (tr|R0QPA3) FtsJ-like methyltransferase family prot... 87 6e-15
R0QBR3_NEIME (tr|R0QBR3) FtsJ-like methyltransferase family prot... 87 6e-15
R0Q8H2_NEIME (tr|R0Q8H2) FtsJ-like methyltransferase family prot... 87 6e-15
R0Q5N5_NEIME (tr|R0Q5N5) FtsJ-like methyltransferase family prot... 87 6e-15
R0Q4T6_NEIME (tr|R0Q4T6) FtsJ-like methyltransferase family prot... 87 6e-15
R0PWE9_NEIME (tr|R0PWE9) FtsJ-like methyltransferase family prot... 87 6e-15
R0PS77_NEIME (tr|R0PS77) FtsJ-like methyltransferase family prot... 87 6e-15
R0PKE6_NEIME (tr|R0PKE6) FtsJ-like methyltransferase family prot... 87 6e-15
R0P6G7_NEIME (tr|R0P6G7) FtsJ-like methyltransferase family prot... 87 6e-15
R0NPK6_NEIME (tr|R0NPK6) FtsJ-like methyltransferase family prot... 87 6e-15
R0N907_NEIME (tr|R0N907) FtsJ-like methyltransferase family prot... 87 6e-15
L5V9T6_NEIME (tr|L5V9T6) Ribosomal RNA large subunit methyltrans... 87 6e-15
L5V0C7_NEIME (tr|L5V0C7) Ribosomal RNA large subunit methyltrans... 87 6e-15
L5UUK1_NEIME (tr|L5UUK1) Ribosomal RNA large subunit methyltrans... 87 6e-15
L5UH32_NEIME (tr|L5UH32) Ribosomal RNA large subunit methyltrans... 87 6e-15
L5UGE4_NEIME (tr|L5UGE4) Ribosomal RNA large subunit methyltrans... 87 6e-15
K6ZL18_9ALTE (tr|K6ZL18) Ribosomal RNA large subunit methyltrans... 87 6e-15
I1E237_9GAMM (tr|I1E237) Ribosomal RNA large subunit methyltrans... 87 6e-15
M2RSW1_CERSU (tr|M2RSW1) Uncharacterized protein OS=Ceriporiopsi... 87 7e-15
N9MUT1_9GAMM (tr|N9MUT1) Ribosomal RNA large subunit methyltrans... 86 7e-15
N9PRX4_9GAMM (tr|N9PRX4) Ribosomal RNA large subunit methyltrans... 86 8e-15
N8ZC88_9GAMM (tr|N8ZC88) Ribosomal RNA large subunit methyltrans... 86 8e-15
A8PPF9_9COXI (tr|A8PPF9) Ribosomal RNA large subunit methyltrans... 86 9e-15
N9Q1B5_9GAMM (tr|N9Q1B5) Ribosomal RNA large subunit methyltrans... 86 1e-14
N8WAI6_9GAMM (tr|N8WAI6) Ribosomal RNA large subunit methyltrans... 86 1e-14
G8QHK1_AZOSU (tr|G8QHK1) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9C6R0_ACIJU (tr|N9C6R0) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9B0T2_ACIJU (tr|N9B0T2) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9AP24_ACIJU (tr|N9AP24) Ribosomal RNA large subunit methyltrans... 86 1e-14
D0SM10_ACIJU (tr|D0SM10) Ribosomal RNA large subunit methyltrans... 86 1e-14
K5WA83_AGABU (tr|K5WA83) Uncharacterized protein OS=Agaricus bis... 86 1e-14
M1FJE4_9ALTE (tr|M1FJE4) Ribosomal RNA large subunit methyltrans... 86 1e-14
K9HZ58_AGABB (tr|K9HZ58) AdoMet-dependent rRNA methyltransferase... 86 1e-14
N9G850_ACIHA (tr|N9G850) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9FGB4_ACIHA (tr|N9FGB4) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9NGP0_9GAMM (tr|N9NGP0) Ribosomal RNA large subunit methyltrans... 86 1e-14
K9BEE4_ACIBA (tr|K9BEE4) Ribosomal RNA large subunit methyltrans... 86 1e-14
N9RC59_9GAMM (tr|N9RC59) Ribosomal RNA large subunit methyltrans... 86 1e-14
K8WZA2_9ENTR (tr|K8WZA2) Ribosomal RNA large subunit methyltrans... 86 1e-14
A3J7Q8_9ALTE (tr|A3J7Q8) Ribosomal RNA large subunit methyltrans... 86 2e-14
K5WP26_PHACS (tr|K5WP26) Uncharacterized protein OS=Phanerochaet... 86 2e-14
R8Y678_ACICA (tr|R8Y678) Ribosomal RNA large subunit methyltrans... 85 2e-14
D4XSM4_ACIHA (tr|D4XSM4) Ribosomal RNA large subunit methyltrans... 85 2e-14
C0VGU4_9GAMM (tr|C0VGU4) Ribosomal RNA large subunit methyltrans... 85 2e-14
R9B4U4_9GAMM (tr|R9B4U4) Ribosomal RNA large subunit methyltrans... 85 2e-14
N9NEW2_9GAMM (tr|N9NEW2) Ribosomal RNA large subunit methyltrans... 85 2e-14
N9K7Y9_9GAMM (tr|N9K7Y9) Ribosomal RNA large subunit methyltrans... 85 2e-14
N8XQV8_9GAMM (tr|N8XQV8) Ribosomal RNA large subunit methyltrans... 85 2e-14
N8PMN3_9GAMM (tr|N8PMN3) Ribosomal RNA large subunit methyltrans... 85 2e-14
D5X1V0_THIK1 (tr|D5X1V0) Ribosomal RNA large subunit methyltrans... 85 2e-14
D5CQR2_SIDLE (tr|D5CQR2) Ribosomal RNA large subunit methyltrans... 85 2e-14
N9FEG8_9GAMM (tr|N9FEG8) Ribosomal RNA large subunit methyltrans... 85 2e-14
K0CHP0_ALCDB (tr|K0CHP0) Ribosomal RNA large subunit methyltrans... 85 2e-14
M7CC85_MORMO (tr|M7CC85) Cell division protein FtsJ OS=Morganell... 85 2e-14
J7TT22_MORMO (tr|J7TT22) Ribosomal RNA large subunit methyltrans... 85 2e-14
K7RTE4_ALTMA (tr|K7RTE4) Ribosomal RNA large subunit methyltrans... 84 3e-14
R7X441_9BURK (tr|R7X441) 23S rRNA methyltransferase J OS=Pandora... 84 3e-14
G5A5F7_PHYSP (tr|G5A5F7) Putative uncharacterized protein OS=Phy... 84 3e-14
D8JDM6_ACISD (tr|D8JDM6) Ribosomal RNA large subunit methyltrans... 84 3e-14
K0EFD0_ALTMB (tr|K0EFD0) Ribosomal RNA large subunit methyltrans... 84 3e-14
K0D3G9_ALTMS (tr|K0D3G9) Ribosomal RNA large subunit methyltrans... 84 3e-14
K0CLV5_ALTME (tr|K0CLV5) Ribosomal RNA large subunit methyltrans... 84 3e-14
J9YBG8_ALTMA (tr|J9YBG8) Ribosomal RNA large subunit methyltrans... 84 3e-14
N9QE97_9GAMM (tr|N9QE97) Ribosomal RNA large subunit methyltrans... 84 3e-14
N8X4F8_9GAMM (tr|N8X4F8) Ribosomal RNA large subunit methyltrans... 84 3e-14
K9A4K7_ACIBA (tr|K9A4K7) Ribosomal RNA large subunit methyltrans... 84 3e-14
N9TG07_9GAMM (tr|N9TG07) Ribosomal RNA large subunit methyltrans... 84 3e-14
N9RL05_9GAMM (tr|N9RL05) Ribosomal RNA large subunit methyltrans... 84 3e-14
N9E6L6_ACIRA (tr|N9E6L6) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9CLY8_ACIRA (tr|N9CLY8) Ribosomal RNA large subunit methyltrans... 84 4e-14
N8YLS1_9GAMM (tr|N8YLS1) Ribosomal RNA large subunit methyltrans... 84 4e-14
G7GGT7_9GAMM (tr|G7GGT7) Ribosomal RNA large subunit methyltrans... 84 4e-14
D0T304_ACIRA (tr|D0T304) Ribosomal RNA large subunit methyltrans... 84 4e-14
C6RLR0_ACIRA (tr|C6RLR0) Ribosomal RNA large subunit methyltrans... 84 4e-14
K8WY63_9ENTR (tr|K8WY63) Ribosomal RNA large subunit methyltrans... 84 4e-14
N8QQ14_9GAMM (tr|N8QQ14) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9SQ00_9GAMM (tr|N9SQ00) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9RDR7_9GAMM (tr|N9RDR7) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9LN37_9GAMM (tr|N9LN37) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9LG61_9GAMM (tr|N9LG61) Ribosomal RNA large subunit methyltrans... 84 4e-14
N9C2A8_9GAMM (tr|N9C2A8) Ribosomal RNA large subunit methyltrans... 84 5e-14
B3L783_PLAKH (tr|B3L783) Methyltransferase, putative OS=Plasmodi... 84 5e-14
N9MK02_9GAMM (tr|N9MK02) Ribosomal RNA large subunit methyltrans... 84 5e-14
N9TEC5_9GAMM (tr|N9TEC5) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8X825_9GAMM (tr|N8X825) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8WM79_9GAMM (tr|N8WM79) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8W0F0_9GAMM (tr|N8W0F0) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8VJQ5_9GAMM (tr|N8VJQ5) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8UEE6_9GAMM (tr|N8UEE6) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8QB76_9GAMM (tr|N8QB76) Ribosomal RNA large subunit methyltrans... 84 5e-14
N8Q751_9GAMM (tr|N8Q751) Ribosomal RNA large subunit methyltrans... 84 5e-14
N9QU74_9GAMM (tr|N9QU74) Ribosomal RNA large subunit methyltrans... 84 6e-14
N9D623_9GAMM (tr|N9D623) Ribosomal RNA large subunit methyltrans... 84 6e-14
K2EXL9_9BACT (tr|K2EXL9) Ribosomal RNA large subunit methyltrans... 83 6e-14
C5AE50_BURGB (tr|C5AE50) Ribosomal RNA large subunit methyltrans... 83 7e-14
J4I889_FIBRA (tr|J4I889) Uncharacterized protein OS=Fibroporia r... 83 7e-14
N9N0I0_9GAMM (tr|N9N0I0) Ribosomal RNA large subunit methyltrans... 83 7e-14
N8RCJ2_9GAMM (tr|N8RCJ2) Ribosomal RNA large subunit methyltrans... 83 7e-14
H9JC35_BOMMO (tr|H9JC35) Uncharacterized protein OS=Bombyx mori ... 83 7e-14
R8YR92_ACIG3 (tr|R8YR92) Ribosomal RNA large subunit methyltrans... 83 7e-14
N9HWZ8_ACIBA (tr|N9HWZ8) Ribosomal RNA large subunit methyltrans... 83 8e-14
D0NBK4_PHYIT (tr|D0NBK4) Ribosomal RNA large subunit methyltrans... 83 8e-14
J4Z993_ACIRA (tr|J4Z993) Ribosomal RNA large subunit methyltrans... 83 8e-14
G8WJ36_KLEOK (tr|G8WJ36) Ribosomal RNA large subunit methyltrans... 83 9e-14
M9WC51_KLEOR (tr|M9WC51) 23S rRNA methyltransferase J OS=Raoulte... 83 9e-14
K6KFR0_KLEOX (tr|K6KFR0) Ribosomal RNA large subunit methyltrans... 83 9e-14
J6IYK9_9ENTR (tr|J6IYK9) Ribosomal RNA large subunit methyltrans... 83 9e-14
I6HG51_SHIFL (tr|I6HG51) Ribosomal RNA large subunit methyltrans... 83 9e-14
H3N3F0_KLEOX (tr|H3N3F0) Ribosomal RNA large subunit methyltrans... 83 9e-14
H3MSZ7_KLEOX (tr|H3MSZ7) Ribosomal RNA large subunit methyltrans... 83 9e-14
H3MBF2_KLEOX (tr|H3MBF2) Ribosomal RNA large subunit methyltrans... 83 9e-14
H3LUA7_KLEOX (tr|H3LUA7) Ribosomal RNA large subunit methyltrans... 83 9e-14
H3LDM7_KLEOX (tr|H3LDM7) Ribosomal RNA large subunit methyltrans... 83 9e-14
D4BKA4_9ENTR (tr|D4BKA4) Ribosomal RNA large subunit methyltrans... 83 9e-14
A5K2F1_PLAVS (tr|A5K2F1) FtsJ-like methyltransferase, putative O... 83 9e-14
G9Y8Y9_HAFAL (tr|G9Y8Y9) Ribosomal RNA large subunit methyltrans... 83 9e-14
E5YJU4_9ENTR (tr|E5YJU4) Ribosomal RNA large subunit methyltrans... 82 1e-13
R8WM76_9ENTR (tr|R8WM76) Ribosomal RNA large subunit methyltrans... 82 1e-13
R8V434_9ENTR (tr|R8V434) Ribosomal RNA large subunit methyltrans... 82 1e-13
R8US01_9ENTR (tr|R8US01) Ribosomal RNA large subunit methyltrans... 82 1e-13
R1HL40_CITFR (tr|R1HL40) 23S rRNA methyltransferase J OS=Citroba... 82 1e-13
M3CI54_CITFR (tr|M3CI54) Ribosomal RNA large subunit methyltrans... 82 1e-13
K8ZCE3_9ENTR (tr|K8ZCE3) Ribosomal RNA large subunit methyltrans... 82 1e-13
K8QZV0_CITFR (tr|K8QZV0) Ribosomal RNA large subunit methyltrans... 82 1e-13
J1G5X0_9ENTR (tr|J1G5X0) Ribosomal RNA large subunit methyltrans... 82 1e-13
G9SD59_CITFR (tr|G9SD59) Ribosomal RNA large subunit methyltrans... 82 1e-13
C1M9Y2_9ENTR (tr|C1M9Y2) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9B582_ACIBI (tr|N9B582) Ribosomal RNA large subunit methyltrans... 82 1e-13
D6JT66_ACIG3 (tr|D6JT66) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9EP01_ACICA (tr|N9EP01) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9F6B9_ACICA (tr|N9F6B9) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8N073_ACICA (tr|N8N073) Ribosomal RNA large subunit methyltrans... 82 1e-13
D0S0Z9_ACICA (tr|D0S0Z9) Ribosomal RNA large subunit methyltrans... 82 1e-13
F0QES8_ACIBD (tr|F0QES8) Ribosomal RNA large subunit methyltrans... 82 1e-13
F0KLV5_ACICP (tr|F0KLV5) Ribosomal RNA large subunit methyltrans... 82 1e-13
E8PAJ0_ACIB1 (tr|E8PAJ0) Ribosomal RNA large subunit methyltrans... 82 1e-13
R8YNH7_ACIG3 (tr|R8YNH7) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9L672_ACIBA (tr|N9L672) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9KJ75_ACIBA (tr|N9KJ75) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9KEP5_ACIBA (tr|N9KEP5) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9K802_ACIBA (tr|N9K802) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9JW37_ACIBA (tr|N9JW37) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9JAK2_ACIBA (tr|N9JAK2) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9IWX5_ACIBA (tr|N9IWX5) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9I5G6_ACIBA (tr|N9I5G6) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9I292_ACIBA (tr|N9I292) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9G7G9_ACIG3 (tr|N9G7G9) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9G0C3_ACIG3 (tr|N9G0C3) Ribosomal RNA large subunit methyltrans... 82 1e-13
N9AAN0_9GAMM (tr|N9AAN0) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8ZBU8_ACIBA (tr|N8ZBU8) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8Z4Z1_ACIBA (tr|N8Z4Z1) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8URQ0_ACIBA (tr|N8URQ0) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8U8T5_ACIBA (tr|N8U8T5) Ribosomal RNA large subunit methyltrans... 82 1e-13
N8TQ71_ACIBA (tr|N8TQ71) Ribosomal RNA large subunit methyltrans... 82 1e-13
>G7KBS2_MEDTR (tr|G7KBS2) Ribosomal RNA large subunit methyltransferase E
OS=Medicago truncatula GN=MTR_5g080020 PE=4 SV=1
Length = 238
Score = 362 bits (928), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 182/240 (75%), Positives = 198/240 (82%), Gaps = 3/240 (1%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M SGAPDF+YKEAQRLGYVARSAFKL+QIQK +IK GSSVLDLGCAPGSWLQVACQS
Sbjct: 1 MAKSGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGP +GGSVLGID KKVKVP HCDSRV T+AADVMTL K QLR LSPKQKGFSVILSD
Sbjct: 61 LGPFHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP VSG+TTKDAALS ELGMRALDLAVG ++E DPSG+DD
Sbjct: 121 MCPLVSGITTKDAALSFELGMRALDLAVGKVASVCNSDGDNLDEVKERC---DPSGADDG 177
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
G+LRVGG+L++KLLESED+KEI+QICKPLF KS WLRPKATRPSSREIYLICQGLK + K
Sbjct: 178 GLLRVGGHLVVKLLESEDAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGLKSEIK 237
>I1M849_SOYBN (tr|I1M849) Uncharacterized protein OS=Glycine max PE=3 SV=1
Length = 221
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/241 (71%), Positives = 190/241 (78%), Gaps = 20/241 (8%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M G DF+YKEAQRLGYVARSAFKLLQIQ II GSS+LDLGCAPG WLQVACQS
Sbjct: 1 MVVGGTADFFYKEAQRLGYVARSAFKLLQIQNQHKIISPGSSILDLGCAPGGWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGP + GGSVLG+D KKVKVPP+HCDSRV TI+ADV TL +L+ALSPK+KGFSVILSD
Sbjct: 61 LGPFRGGGSVLGVDTKKVKVPPLHCDSRVQTISADVTTLPHQRLKALSPKEKGFSVILSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP VSG+TTKDAALS ELGMRALDLA+G I E SD
Sbjct: 121 MCPLVSGITTKDAALSFELGMRALDLALGSR-------------IHLEP-------SDCV 160
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
GVL+VGG+L+IKLLESED+KEI+QI KPLFRK+SWLRPKATRPSSREIYLICQGLKPDA
Sbjct: 161 GVLKVGGHLVIKLLESEDAKEINQISKPLFRKTSWLRPKATRPSSREIYLICQGLKPDAM 220
Query: 241 T 241
T
Sbjct: 221 T 221
>B9HTH2_POPTR (tr|B9HTH2) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_822470 PE=3 SV=1
Length = 232
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 164/236 (69%), Positives = 196/236 (83%), Gaps = 7/236 (2%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGYVARSAFKLLQIQK +I GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL++GG+V+GID+KKVKVPP++CDSRV T+ ADVM L K+Q+RALSP+QKGFSV+LSD
Sbjct: 61 LGPLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDP-SGSDD 179
MCP VSG+TT+DAALS ELGM+AL LAVG IR ++ ++D +DD
Sbjct: 121 MCPLVSGITTRDAALSAELGMQALGLAVGRAATAHLDE------IRTDRLLNDSVCTADD 174
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G+L+ GG+L+IKLLESED+KE S+ICKPLFRK+SWLRPKATR SSREIYLICQGL
Sbjct: 175 NGILQPGGHLVIKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230
>B9T000_RICCO (tr|B9T000) Ftsj, putative OS=Ricinus communis GN=RCOM_0039930 PE=3
SV=1
Length = 228
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/236 (69%), Positives = 193/236 (81%), Gaps = 8/236 (3%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +GAPDF+Y+EAQRLGYVARSAFKLLQIQK +I GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL++GGSV+GID+KKVKVP +CD+RV T+ ADVM L + Q+RALS +QKGFSV+LSD
Sbjct: 61 LGPLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP VSG+TTKDAALS+ELGM+ALD+A+G E Q+ D SG +D
Sbjct: 121 MCPPVSGITTKDAALSMELGMQALDIAIGGAASAHPDD--------ENQNDDSTSGENDN 172
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVL+ GG+L+IKLLESED +E ++ICKPLFRK+SWLRPKATR SSREIYLICQGLK
Sbjct: 173 GVLQAGGHLVIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228
>M5XDC4_PRUPE (tr|M5XDC4) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa010774mg PE=4 SV=1
Length = 237
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 166/241 (68%), Positives = 191/241 (79%), Gaps = 6/241 (2%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGYVARSAFKLLQIQK +I GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGKPDFFYREAQRLGYVARSAFKLLQIQKQYKLITPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGP++ GG V+GID+KKVKVP HCDSRV T+ ADVM L K Q+R LSP+QKGFSVILSD
Sbjct: 61 LGPVKSGGLVVGIDLKKVKVPAAHCDSRVQTVCADVMKLPKAQVRELSPQQKGFSVILSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDP-SGSDD 179
MCP VSG+T+KDAALS+ELG +ALDLAVG I+ E S D + SD
Sbjct: 121 MCPLVSGITSKDAALSLELGRQALDLAVGGAALAHPKNE-----IQMEASNDGAITSSDV 175
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDA 239
GVLR GG+L+IKLLESED +E S+ICKPLFRK+S LRPKATRPSSREIY+ICQGL+ A
Sbjct: 176 NGVLRRGGHLVIKLLESEDVQEFSRICKPLFRKASLLRPKATRPSSREIYVICQGLQSQA 235
Query: 240 K 240
K
Sbjct: 236 K 236
>D7TLR9_VITVI (tr|D7TLR9) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_13s0019g01820 PE=4 SV=1
Length = 233
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/237 (67%), Positives = 188/237 (79%), Gaps = 4/237 (1%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGY ARSAFKLLQ+QK +IK GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL++GG V+GID+KKVKVP +HCDSRV T+ ADVM L K ++RA SP++KGFSVILSD
Sbjct: 61 LGPLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP VSG+TTKDA LS ELGM+AL LAV + E D SG DD
Sbjct: 121 MCPLVSGITTKDAVLSAELGMQALHLAV----RGPALAPSGDEIQKGEHHDDSTSGPDDD 176
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKP 237
G+L+ GG+L+IKLLESED++ S+ICKPLFRK+SWLRPKATR SSREIYLICQGL+P
Sbjct: 177 GILQPGGHLVIKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLRP 233
>R0GWX7_9BRAS (tr|R0GWX7) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10001777mg PE=4 SV=1
Length = 255
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 192/244 (78%), Gaps = 23/244 (9%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +GAPDF+Y+EAQRLGYVARSAFKLLQIQK +IK GSSVLDLGCAPG+WLQVACQS
Sbjct: 27 MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 86
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL++GG+V+G+D+KKVKVPP CDSRV TI+ADV+ + ++R LSP+Q GFSV+LSD
Sbjct: 87 LGPLKNGGNVVGMDIKKVKVPP-QCDSRVQTISADVLNFPRQKIRELSPQQMGFSVVLSD 145
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCPSVSG+TT+DAALS ELGMRAL+LAVG QS+DD + DK
Sbjct: 146 MCPSVSGITTRDAALSAELGMRALNLAVGQAAI--------------SQSLDDDNDGGDK 191
Query: 181 --------GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
GVLR GG+L+IKLLESED+++ ++ICKP+F K+SWLRPKATR SSREIYLIC
Sbjct: 192 VSSNETSRGVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRSSSREIYLIC 251
Query: 233 QGLK 236
QG +
Sbjct: 252 QGFR 255
>Q9SXH3_ARATH (tr|Q9SXH3) FtsJ OS=Arabidopsis thaliana GN=ftsJ PE=3 SV=1
Length = 224
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 188/239 (78%), Gaps = 18/239 (7%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGYVARSAFKLLQIQK +IK GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL+ GG V+G+D+KKVKVPP CDSRV TIAADV+ + ++R LSP+Q GFSVILSD
Sbjct: 61 LGPLRSGGIVVGMDIKKVKVPP-QCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 119
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MC SVSG+TT+DAALS ELGMRALDLAVG QS +D G ++
Sbjct: 120 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI--------------SQSPNDDDGGPNE 165
Query: 181 ---GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVLR GG+L+IKLLESED+++ ++ICKP+F K+SWLRPKATRPSSREIYLICQG +
Sbjct: 166 SRPGVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224
>D7M5X0_ARALL (tr|D7M5X0) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_325857 PE=3 SV=1
Length = 229
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/244 (65%), Positives = 186/244 (76%), Gaps = 23/244 (9%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGYVARSAFKLLQIQK +IK GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL+ GG V+G+D+KKVKVPP CDSRV TIAADV+ + +R LSP+Q GFSVILSD
Sbjct: 61 LGPLKSGGIVVGMDIKKVKVPP-QCDSRVQTIAADVLNFPRQTIRELSPQQLGFSVILSD 119
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDD------- 173
MC SVSG+TT+DAALS ELGMRALDLAVG QS DD
Sbjct: 120 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI--------------SQSPDDDNDGGDE 165
Query: 174 -PSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
PS +GVLR GG+L+IKLLESED+++ ++ICKP+F K+SWLRPKATR SSREIYLIC
Sbjct: 166 VPSNESRRGVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRSSSREIYLIC 225
Query: 233 QGLK 236
QG +
Sbjct: 226 QGFR 229
>M4CX51_BRARP (tr|M4CX51) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra008798 PE=3 SV=1
Length = 227
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/236 (63%), Positives = 185/236 (78%), Gaps = 10/236 (4%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +G PDF+Y+EAQRLGYVARSAFKLLQIQK +IK GSSVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LGPL+ GG+V+G+D+KKVKVPP+ CD+RV TI+ADV+ + ++R LSP+ GFSV+LSD
Sbjct: 61 LGPLRSGGNVVGMDIKKVKVPPL-CDARVQTISADVLNFPRQKIRELSPQHMGFSVVLSD 119
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MC SV+G+T++DAALS ELGMRAL+LAVG EE V
Sbjct: 120 MCHSVTGITSRDAALSAELGMRALNLAVGQAAISKSLDDDDDEGGDEESRV--------- 170
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVLR GG+L+IKLLESED+++ ++ICKP+F K+SWLRPKATRPSSREIYLICQG +
Sbjct: 171 GVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 226
>I1GLI3_BRADI (tr|I1GLI3) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI1G03600 PE=4 SV=1
Length = 234
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/235 (62%), Positives = 177/235 (75%), Gaps = 3/235 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA+G DF+Y+EAQRLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GATGTADFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG V+G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGVVIGLDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TTKD A+S ELGMRAL LA+G + + DP D+ G
Sbjct: 123 CPVVSGITTKDEAISCELGMRALSLAIGKIKLKESADYSITMEKFQSSTGPDP---DEDG 179
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
VLR GGNL+IK LE+ED S+ CK F+K S LRPKATR SSREIYLIC+GL+
Sbjct: 180 VLRRGGNLVIKFLENEDVPGFSRFCKEKFKKVSLLRPKATRSSSREIYLICEGLR 234
>M0TX46_MUSAM (tr|M0TX46) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 232
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/236 (62%), Positives = 178/236 (75%), Gaps = 4/236 (1%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M +GAPDF+Y+EAQRLGYVARSAFKLLQ+QK +I G+SVLDLGCAPG+WLQVACQS
Sbjct: 1 MSGAGAPDFFYREAQRLGYVARSAFKLLQMQKQHKLITPGASVLDLGCAPGAWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
LG L+ GG+V+GID+KK+K P HCDSRV T+ ADVM+L K Q+RA+SP+++GFSVILSD
Sbjct: 61 LGALEKGGAVVGIDLKKMKAPSSHCDSRVRTVCADVMSLLKEQVRAMSPQERGFSVILSD 120
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP+VSG+T KD ALS +LGMRAL LAVG +D +++
Sbjct: 121 MCPTVSGITAKDTALSCQLGMRALSLAVGKVPLPCSAGDSNTELHLNSTGLD----ANEV 176
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVLR GGNL+IKLLESE++ + CK F K SWLRPKATR SREIYLICQGL+
Sbjct: 177 GVLRRGGNLVIKLLESEENAGFMKFCKRRFTKVSWLRPKATRSCSREIYLICQGLR 232
>Q10BD5_ORYSJ (tr|Q10BD5) FtsJ-like methyltransferase family protein, putative,
expressed OS=Oryza sativa subsp. japonica
GN=Os03g0822300 PE=4 SV=1
Length = 233
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/235 (61%), Positives = 178/235 (75%), Gaps = 4/235 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA G DF+Y+EAQRLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GAGGTADFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG ++G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGVIVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TTKDAA+S ELGMRAL LAVG + + QS +P D+ G
Sbjct: 123 CPVVSGITTKDAAISCELGMRALSLAVG---KMKAKDSDCIAILEKFQSSTEPD-PDEDG 178
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+LR GG+L+IK LE+ED + CK F+K S LRPKATR SSREI+++C+GL+
Sbjct: 179 ILRRGGSLVIKFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEGLR 233
>B8AMC5_ORYSI (tr|B8AMC5) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_14112 PE=2 SV=1
Length = 233
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/235 (61%), Positives = 178/235 (75%), Gaps = 4/235 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA G DF+Y+EAQRLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GAGGTADFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG ++G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGVIVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TTKDAA+S ELGMRAL LAVG + + QS +P D+ G
Sbjct: 123 CPVVSGITTKDAAISCELGMRALSLAVG---KMKAKDSDCIAILEKFQSSTEPD-PDEDG 178
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+LR GG+L+IK LE+ED + CK F+K S LRPKATR SSREI+++C+GL+
Sbjct: 179 ILRRGGSLVIKFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEGLR 233
>M0VZG9_HORVD (tr|M0VZG9) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 234
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/235 (61%), Positives = 175/235 (74%), Gaps = 3/235 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA+G DF+Y+EA RLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GATGTADFFYREALRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG V+G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGLVVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TT+D A+S ELGMRAL LAVG + DP D+ G
Sbjct: 123 CPVVSGITTRDEAISCELGMRALSLAVGKIKLKESADYSVTMERFQSSMGPDP---DEDG 179
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
VLR GG+L+IK LE+ED ++ CK F+K S LRPKATR SSREIY+IC+GL+
Sbjct: 180 VLRRGGSLVIKFLENEDIPGFNKFCKEKFKKVSLLRPKATRSSSREIYMICEGLR 234
>Q852A4_ORYSJ (tr|Q852A4) Putative FtsJ cell division protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0081B07.21 PE=2 SV=1
Length = 403
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 176/233 (75%), Gaps = 4/233 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA G DF+Y+EAQRLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GAGGTADFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG ++G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGVIVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TTKDAA+S ELGMRAL LAVG + + QS +P D+ G
Sbjct: 123 CPVVSGITTKDAAISCELGMRALSLAVG---KMKAKDSDCIAILEKFQSSTEPD-PDEDG 178
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+LR GG+L+IK LE+ED + CK F+K S LRPKATR SSREI+++C+G
Sbjct: 179 ILRRGGSLVIKFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEG 231
>M0VZH0_HORVD (tr|M0VZH0) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 235
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/236 (61%), Positives = 175/236 (74%), Gaps = 4/236 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA+G DF+Y+EA RLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GATGTADFFYREALRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQ-KGFSVILSD 120
GPL+ GG V+G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+Q +GFSVILSD
Sbjct: 63 GPLEKGGLVVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQQERGFSVILSD 122
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
MCP VSG+TT+D A+S ELGMRAL LAVG + DP D+
Sbjct: 123 MCPVVSGITTRDEAISCELGMRALSLAVGKIKLKESADYSVTMERFQSSMGPDP---DED 179
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVLR GG+L+IK LE+ED ++ CK F+K S LRPKATR SSREIY+IC+GL+
Sbjct: 180 GVLRRGGSLVIKFLENEDIPGFNKFCKEKFKKVSLLRPKATRSSSREIYMICEGLR 235
>J3LU94_ORYBR (tr|J3LU94) Uncharacterized protein OS=Oryza brachyantha
GN=OB03G46200 PE=4 SV=1
Length = 270
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 179/272 (65%), Gaps = 41/272 (15%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFK----------------------------------- 26
GA+G DF+Y+EAQRL YVARSAFK
Sbjct: 3 GAAGTADFFYREAQRLSYVARSAFKVCVGALLFLPPTLVRITSFVHVSREPHAVPGCLLP 62
Query: 27 --LLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSVLGIDVKKVKVPPVH 84
L+QIQK +I G++VLDLGCAPG+WLQVACQ+LGPL+ GG ++G+DVKKVKVP H
Sbjct: 63 SQLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVIVGVDVKKVKVPSAH 122
Query: 85 CDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTTKDAALSVELGMRAL 144
CDSRV T+ ADVM L K Q RA+SP+++GFSV+LSDMCP VSG+TTKDAA+S ELGMRAL
Sbjct: 123 CDSRVRTVCADVMALMKQQARAMSPQERGFSVVLSDMCPVVSGITTKDAAISCELGMRAL 182
Query: 145 DLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQ 204
LAVG + + QS +P D+ G+LR GG+L+IK LE+ED +
Sbjct: 183 SLAVG---KMKAKDSDCNTILEKFQSSTEPD-PDEDGILRRGGSLVIKFLENEDIPGFGK 238
Query: 205 ICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
CK F+K SWLRPKATR SSREIYLIC+GL+
Sbjct: 239 FCKEKFKKVSWLRPKATRSSSREIYLICEGLR 270
>I1PGV4_ORYGL (tr|I1PGV4) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 263
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/265 (54%), Positives = 178/265 (67%), Gaps = 34/265 (12%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFK------------------------------LLQIQ 31
GA G DF+Y+EAQRLGYVARSAFK L+QIQ
Sbjct: 3 GAGGTADFFYREAQRLGYVARSAFKVSAFLLTPLARTVCQLLPSHARSRLLCPSQLIQIQ 62
Query: 32 KHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSVLGIDVKKVKVPPVHCDSRVHT 91
K +I G++VLDLGCAPG+WLQVACQ+LGPL+ GG ++G+DVKKVKVP HCDSRV T
Sbjct: 63 KQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGVIVGVDVKKVKVPSAHCDSRVRT 122
Query: 92 IAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXX 151
+ ADVM L K Q RA+SP+++GFSVILSDMCP VSG+TTKDAA+S ELGMRAL LAVG
Sbjct: 123 VCADVMALMKQQARAMSPQERGFSVILSDMCPVVSGITTKDAAISCELGMRALSLAVG-- 180
Query: 152 XXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFR 211
+ + QS +P D+ G+LR GG+L+IK LE+ED + CK F+
Sbjct: 181 -KMKAKDSDCIAILEKFQSSTEPD-PDEDGILRRGGSLVIKFLENEDIPGFGKFCKEKFK 238
Query: 212 KSSWLRPKATRPSSREIYLICQGLK 236
K S LRPKATR SSREI+++C+GL+
Sbjct: 239 KVSLLRPKATRSSSREIFMVCEGLR 263
>C5WUZ9_SORBI (tr|C5WUZ9) Putative uncharacterized protein Sb01g003090 OS=Sorghum
bicolor GN=Sb01g003090 PE=4 SV=1
Length = 233
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/237 (60%), Positives = 175/237 (73%), Gaps = 5/237 (2%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M A G DF+Y+E+ RLGYVARSAFKL+Q+QK +I G++VLDLGCAPG+WLQVACQ+
Sbjct: 1 MAAGGTADFFYRESLRLGYVARSAFKLIQMQKQHKLIAPGAAVLDLGCAPGAWLQVACQN 60
Query: 61 LGPLQHGGSVLGIDV-KKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILS 119
LGPL+ GG V+G+DV +KVKVP HCDSRV T+ ADVMT+ K Q RA+SP+++GFSVILS
Sbjct: 61 LGPLEKGGVVVGVDVHQKVKVPSAHCDSRVRTVRADVMTMMKQQARAMSPQERGFSVILS 120
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DMCP VSG+TTKD A+S ELGMRAL LAVG I E+ D+
Sbjct: 121 DMCPPVSGITTKDGAISCELGMRALSLAVGKIKLKESDYSE----ILEKYLSSTEPDPDE 176
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GVLR GGNL++K LE+ED + CK F+K S LRPKATRPSSREIY+IC+GL+
Sbjct: 177 DGVLRRGGNLVMKFLENEDISGFGKFCKVKFKKVSLLRPKATRPSSREIYMICEGLR 233
>A9SP40_PHYPA (tr|A9SP40) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_58334 PE=3 SV=1
Length = 225
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/229 (56%), Positives = 163/229 (71%), Gaps = 19/229 (8%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
+ G DF+Y+EA+RL YVARSAFKLL+IQK II+ G+SVLDLGCAPG++LQVACQ+LG
Sbjct: 2 SGGTADFFYREARRLKYVARSAFKLLEIQKKHRIIRPGASVLDLGCAPGAFLQVACQNLG 61
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMC 122
P + GG V+G+D+KKVKVP HCD RV TIA+DVM +S L + S KG+SV++SDMC
Sbjct: 62 PPEKGGVVVGVDIKKVKVPADHCDHRVRTIASDVMQMSHAALASFSASGKGYSVLISDMC 121
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
PSVSGV +KDAALS ELGM AL LA+G QS D S + G+
Sbjct: 122 PSVSGVGSKDAALSAELGMCALHLALG-------------------QSEVDDSIPETGGI 162
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
L GG+++IKLLE EDS+ ++CK F++ WLRPKATR +SREIY I
Sbjct: 163 LLPGGSIVIKLLEGEDSQGFLKLCKGRFQQLHWLRPKATRSTSREIYFI 211
>D8RR67_SELML (tr|D8RR67) Putative uncharacterized protein OS=Selaginella
moellendorffii GN=SELMODRAFT_104009 PE=3 SV=1
Length = 223
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 155/235 (65%), Gaps = 22/235 (9%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
AS PDF+YKEA RL YVARSAFKL++IQ+ I+K G+++LDLGCAPG+WLQVACQ+LG
Sbjct: 2 ASHVPDFFYKEALRLRYVARSAFKLVEIQEKHRILKPGAAILDLGCAPGAWLQVACQNLG 61
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQK-GFSVILSDM 121
GG V+G+D KK+ VP H D RV IAADVM + L A++P+ K ++VILSDM
Sbjct: 62 TRDQGGVVVGVDTKKINVPGDHTDHRVKAIAADVMKIKPETLAAMTPEVKITYNVILSDM 121
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK- 180
CPSVSG+ KDA LS ELG RAL+LA+G DD S K
Sbjct: 122 CPSVSGIGFKDATLSAELGSRALELALGFHP-------------------DDERDSTKKV 162
Query: 181 -GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+L G+L+IKLLE E+S+ C FR SWLRPKA+R +SREIYLI +G
Sbjct: 163 NGLLVPSGSLVIKLLEGEESQGFPDYCNKYFRSVSWLRPKASRSTSREIYLIAKG 217
>M0VZH2_HORVD (tr|M0VZH2) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 217
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Query: 2 GASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSL 61
GA+G DF+Y+EA RLGYVARSAFKL+QIQK +I G++VLDLGCAPG+WLQVACQ+L
Sbjct: 3 GATGTADFFYREALRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 62
Query: 62 GPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
GPL+ GG V+G+DVKKVKVP HCDSRV T+ ADVM L K Q RA+SP+++GFSVILSDM
Sbjct: 63 GPLEKGGLVVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDM 122
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
CP VSG+TT+D A+S ELGMRAL LAVG + DP D+ G
Sbjct: 123 CPVVSGITTRDEAISCELGMRALSLAVGKIKLKESADYSVTMERFQSSMGPDP---DEDG 179
Query: 182 VLRVGGNLIIKLLESED 198
VLR GG+L+IK LE+ED
Sbjct: 180 VLRRGGSLVIKFLENED 196
>N1QVU4_AEGTA (tr|N1QVU4) Ribosomal RNA large subunit methyltransferase J
OS=Aegilops tauschii GN=F775_00865 PE=4 SV=1
Length = 237
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 27 LLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSVLGIDVKKVKVPPVHCD 86
L+QIQK +I G++VLDLGCAPG+WLQVACQ+LGPL+ GG V+G+DVK + D
Sbjct: 8 LIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKGGLVVGVDVKVRQSADCVID 67
Query: 87 SR-------VHTIAADVMTLSKH------------QLRALSPK----QKGFSVILSDMCP 123
R + +++S H ++ P+ ++GFSVILSDMCP
Sbjct: 68 GRGVGSDFGARLLQNRSLSISHHIWCITDGKTHTYKVEQYLPENEASERGFSVILSDMCP 127
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
VSG+TT+D A+S ELGMRAL LAVG + + DP D+ GVL
Sbjct: 128 VVSGITTRDEAISCELGMRALSLAVGKIKVKESADYRETMERFQTSTGPDP---DEDGVL 184
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+L+IK LE+ED ++ CK F+K S LRPKATR SSREIY+IC+GL+
Sbjct: 185 RRGGSLVIKFLENEDIPGFNKFCKEKFKKVSLLRPKATRSSSREIYMICEGLR 237
>I3SG66_MEDTR (tr|I3SG66) Uncharacterized protein OS=Medicago truncatula PE=2
SV=1
Length = 130
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/112 (82%), Positives = 97/112 (86%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M SGAPDF+YKEAQRLGYVARSAFKL+QIQK +IK GSSVLDLGCAPGSWLQVACQS
Sbjct: 1 MAKSGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQS 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQK 112
LGP +GGSVLGID KKVKVP HCDSRV T+AADVMTL K QLR LSPKQK
Sbjct: 61 LGPFHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQK 112
>A8INI6_CHLRE (tr|A8INI6) Predicted protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_183158 PE=3 SV=1
Length = 254
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 130/233 (55%), Gaps = 16/233 (6%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+KEA++ GYV+R+A+KLL+IQ IIK G +VLDLGC+PG+WLQVACQ +GP + G
Sbjct: 35 DHYFKEAKKAGYVSRAAYKLLEIQDKHKIIKQGGTVLDLGCSPGAWLQVACQQIGPRERG 94
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+VLG+D++ V VP CD+RV + AD TL L +P GF +LSDM SG
Sbjct: 95 GTVLGVDIQPVTVPERFCDARVRVMQADARTLPPSLLAEYAP--GGFDTVLSDMLQFTSG 152
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V D LS+EL AL +A G Y+++ G G LR GG
Sbjct: 153 VN--DVELSLELAGTALHIATG-----YHFDVYGEAYVQQ-------VGFRHTGFLRPGG 198
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
L++K+ E E + + F K +R A+R SRE Y + G KP K
Sbjct: 199 ALVMKVYEGTGVTEFVRDMQRYFTKVVRMRVDASRSMSREFYAVGLGRKPPPK 251
>E1Z372_CHLVA (tr|E1Z372) Putative uncharacterized protein (Fragment)
OS=Chlorella variabilis GN=CHLNCDRAFT_18395 PE=4 SV=1
Length = 205
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 27/229 (11%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D ++K+A+ GYVARSA+KLL+IQ+ +I G +LDLGC PG+WLQVAC+SLGP G
Sbjct: 2 DTFFKKAKASGYVARSAYKLLEIQQKHKLIPQGGQILDLGCHPGAWLQVACESLGPPSRG 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G +LGID+++ P CD RV + AD L + +P G+ +LSDMC G
Sbjct: 62 GRILGIDMQR----PAKCDERVTIVQADATLLPPEFWQEQAP--DGYDAVLSDMCHFTLG 115
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ DA S+EL A +A G P+ + +GVLR GG
Sbjct: 116 NSMADAYKSLELARTAWAIATGGEAAY-------------------PNATLSRGVLRPGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L++KLL+ ++E + + F K +W RPKATR S+E++L+ GLK
Sbjct: 157 TLLMKLLQGPGTQEFAAELRRDFAKVAWHRPKATRSESKEVFLL--GLK 203
>C1N352_MICPC (tr|C1N352) Predicted protein OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_21305 PE=3 SV=1
Length = 231
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 135/254 (53%), Gaps = 53/254 (20%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G DFY KEA+RLGYVARSAFKLL++ I++ G+ VLDLGC PG+W QVAC++LG
Sbjct: 9 GLTDFYAKEAKRLGYVARSAFKLLELSDRFGILRKGAHVLDLGCHPGAWTQVACRALGHP 68
Query: 65 QHGGSVLGIDVKKVKVPPV-HCDSRVHTIAADVMTLSKHQLRALSP-------------- 109
GG VLG+D+++ ++ + H D R AD TL + +LRAL
Sbjct: 69 DEGGGVLGVDLRETELGTLRHVDRRARFAVADATTLCEKRLRALRGGDGDGDGDGDGDES 128
Query: 110 -----KQKGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXY 164
+ + F+V+LSDM PS +G DAA S EL A+ +A+G
Sbjct: 129 IATRRRTRPFTVVLSDMAPSTTGAADVDAARSYELAEAAVRIALG--------------- 173
Query: 165 IREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDS--KEISQICKPLFRKSSWLRPKATR 222
E+++D GG+L++KLLE ++ +C F + W RP+ATR
Sbjct: 174 ---ERALD-------------GGSLVVKLLEGPGGGKADLQAVCARAFDRVRWYRPRATR 217
Query: 223 PSSREIYLICQGLK 236
S E++L+ +G +
Sbjct: 218 RDSSEVFLVARGRR 231
>I0Z088_9CHLO (tr|I0Z088) 23S ribosomal RNA methyltransferase OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_53206 PE=3 SV=1
Length = 236
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 130/232 (56%), Gaps = 17/232 (7%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + + A+ GYVARS+FKLL+IQ+ +++ G+ VLDLGCAPG+WLQVACQSLG +
Sbjct: 8 DHFSRLAKAKGYVARSSFKLLEIQERFRVVRPGAHVLDLGCAPGAWLQVACQSLG--KKS 65
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTL------SKHQLR--ALSPKQKGFSVILS 119
G VLG+D++ VP CD RV + AD L S H + A S GF +LS
Sbjct: 66 GFVLGLDIQACPVPRSFCDDRVRILQADARELRPVDLVSMHSVHSAAASSWSGGFHAVLS 125
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DMC S G + D S+EL A +AVG EE P+G
Sbjct: 126 DMCHSTVGNSAADVLRSLELAQTAAAIAVGDREERDKKASL------EEMYSTGPAGG-R 178
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
GVL GG+ ++KLL+ S+E +Q + F K +W++P ATR SRE+YL+
Sbjct: 179 PGVLLPGGHFVVKLLQGSGSQEFAQELRQHFAKVTWVQPAATRQESREMYLV 230
>D3TIB9_MANIN (tr|D3TIB9) Methyl transferase (Fragment) OS=Mangifera indica PE=2
SV=1
Length = 115
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 91/119 (76%), Gaps = 5/119 (4%)
Query: 115 SVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDP 174
SVILSDMCPSVSG+TTKDAALS ELGMRALDLAVG ++ + S DP
Sbjct: 1 SVILSDMCPSVSGITTKDAALSAELGMRALDLAVGCAASPHPVGDQGERHLNDSNS--DP 58
Query: 175 SGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
D+ GVL+ GG+L+IKLLESED KE SQICKPLFRK+SWLRPKATR SSREIYLICQ
Sbjct: 59 ---DENGVLKPGGHLVIKLLESEDVKEFSQICKPLFRKASWLRPKATRSSSREIYLICQ 114
>C1E350_MICSR (tr|C1E350) Predicted protein (Fragment) OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_80991 PE=4 SV=1
Length = 238
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 135/244 (55%), Gaps = 19/244 (7%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
MG+ DF+ +EA++LGY ARSA KL +IQ +++ G +VLDLGC PG+W QVA +
Sbjct: 1 MGSRKTADFFAREAKKLGYAARSALKLKEIQDRFGVMRPGDAVLDLGCHPGAWTQVASE- 59
Query: 61 LGPLQHGGSVLGIDVKKVKVPPV--HCDSRVHTIA-ADVMTLSKHQLRAL------SP-- 109
+ GSV+G+D+ + + D R T+ ADV L LRAL SP
Sbjct: 60 ----RGAGSVVGVDLTTTRSDALGPRVDPRRTTLTVADVFDLDPPALRALCGSGGASPAS 115
Query: 110 KQKGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQ 169
+ + F+ +LSDM PS SG KDAALS EL +A+ LA+G ++
Sbjct: 116 RSRPFAAVLSDMAPSTSGDGVKDAALSYELAEQAVRLALGARALAVLDGDDDDDDREGDR 175
Query: 170 SVDDPSGSDDKGVLRVGGNLIIKLLESEDS--KEISQICKPLFRKSSWLRPKATRPSSRE 227
D D GVLR GG+L++KLLE ++ ++CKP F W RP+ATR SRE
Sbjct: 176 DGDG-HLEHDPGVLRKGGSLVVKLLEGPGGGRDDLQRVCKPQFESVKWFRPRATRRESRE 234
Query: 228 IYLI 231
++L+
Sbjct: 235 VFLV 238
>B7E4J1_ORYSJ (tr|B7E4J1) cDNA clone:006-305-A03, full insert sequence OS=Oryza
sativa subsp. japonica PE=2 SV=1
Length = 136
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 97 MTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXX 156
M L K Q RA+SP+++GFSVILSDMCP VSG+TTKDAA+S ELGMRAL LAVG
Sbjct: 1 MALMKQQARAMSPQERGFSVILSDMCPVVSGITTKDAAISCELGMRALSLAVG---KMKA 57
Query: 157 XXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWL 216
+ + QS +P D+ G+LR GG+L+IK LE+ED + CK F+K S L
Sbjct: 58 KDSDCIAILEKFQSSTEPD-PDEDGILRRGGSLVIKFLENEDIPGFGKFCKEKFKKVSLL 116
Query: 217 RPKATRPSSREIYLICQGLK 236
RPKATR SSREI+++C+GL+
Sbjct: 117 RPKATRSSSREIFMVCEGLR 136
>M0VZH1_HORVD (tr|M0VZH1) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 137
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 97 MTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXX 156
M L K Q RA+SP+++GFSVILSDMCP VSG+TT+D A+S ELGMRAL LAVG
Sbjct: 1 MALMKQQARAMSPQERGFSVILSDMCPVVSGITTRDEAISCELGMRALSLAVGKIKLKES 60
Query: 157 XXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWL 216
+ DP D+ GVLR GG+L+IK LE+ED ++ CK F+K S L
Sbjct: 61 ADYSVTMERFQSSMGPDP---DEDGVLRRGGSLVIKFLENEDIPGFNKFCKEKFKKVSLL 117
Query: 217 RPKATRPSSREIYLICQGLK 236
RPKATR SSREIY+IC+GL+
Sbjct: 118 RPKATRSSSREIYMICEGLR 137
>Q01CK1_OSTTA (tr|Q01CK1) Elongation factor P (ISS) OS=Ostreococcus tauri
GN=Ot03g03010 PE=3 SV=1
Length = 475
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 128/229 (55%), Gaps = 34/229 (14%)
Query: 12 KEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGS-- 69
+EA+RLGYVARSA KL+Q+ + ++++ SVLDLGCAPG+W+QV + + GG+
Sbjct: 274 REAKRLGYVARSALKLVQLDEKFRLLRNKRSVLDLGCAPGAWIQVVHER--TRRQGGTCA 331
Query: 70 -VLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSGV 128
VLGID+K++ + V A MTL + RA + F +LSDM + G+
Sbjct: 332 RVLGIDLKEIDRGTLAGLRHVDAARASTMTLDATEARASDLGVETFDAVLSDMMVNTRGL 391
Query: 129 TTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGN 188
+ DAA S+EL A+DLAV +R D GVL G+
Sbjct: 392 ASVDAAASLELAECAVDLAV----------------VR------------DGGVLAARGD 423
Query: 189 LIIKLLESEDS-KEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L++K+LE S +E+++ CKP F K +W +P ATR SREIYL+ +G K
Sbjct: 424 LVVKILEGSGSVEELAKHCKPHFDKVNWFKPNATRSESREIYLVARGRK 472
>L9X2B9_9EURY (tr|L9X2B9) Ribosomal RNA large subunit methyltransferase E
OS=Natronolimnobius innermongolicus JCM 12255 GN=rrmJ
PE=3 SV=1
Length = 260
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 36/227 (15%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY +R+A+KL Q+ N+I G +V+DLG APG WLQVA + +GP
Sbjct: 5 DDYYNRAKQEGYRSRAAYKLKQLDDLENVINGGDTVVDLGAAPGGWLQVAAEKVGPR--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D++++K D RV TI D MT + + R + ++SDM P++SG
Sbjct: 62 GNVIGVDLQRIKDLEGTIDERVETIRGD-MTEDRTRERVIDAAGGEVDAVVSDMAPNMSG 120
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L GG
Sbjct: 121 EYSLDQARSLYLARQAFETAL--------------------------------ELLDTGG 148
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
N ++K+ E D ++ F+ PKA+R S EIYLI +G
Sbjct: 149 NFVVKVFEGPDVDDLRADLDDEFQYVRATAPKASRDESSEIYLIGKG 195
>M1WJM4_DESPC (tr|M1WJM4) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio piezophilus (strain DSM 21447 / JCM
15486 / C1TLV30) GN=rlmE PE=3 SV=1
Length = 199
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K A++ Y ARS +KL ++ K + K G +VLDLG APGSW Q A + +G H
Sbjct: 6 DKYFKRAKKENYAARSVYKLKEMDKRFKLFKPGQTVLDLGAAPGSWTQFAGERVGKTGH- 64
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
VLG+D+++ K + + ADV + + L A+ P + F +I+SDM P +G
Sbjct: 65 --VLGVDIQETK---HSFPENITFLQADVFSDAPELLEAMEP-LRPFDLIISDMAPKTTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL RA ++A+ L+ GG
Sbjct: 119 IKFADQANSLELCERAFEVAL--------------------------------KYLKTGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ +K+ ES D+K+ +P F K +P ++R S+EI+++ G K
Sbjct: 147 HFTVKIFESGDTKDFRDALRPYFGKIKNFKPYSSRSESKEIFIVALGFK 195
>L9WEP4_9EURY (tr|L9WEP4) Ribosomal RNA large subunit methyltransferase E
OS=Natronorubrum sulfidifaciens JCM 14089 GN=rrmJ PE=3
SV=1
Length = 261
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 37/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY ++++ GY +R+A+KL Q+ N+I G++V+DLG APG WLQVA + +GP
Sbjct: 5 DQYYNKSKQEGYRSRAAYKLKQLDNLENVISGGNTVVDLGAAPGGWLQVAAEKVGPP--- 61
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
GSV+G+D++++K + D RV T+ D MT K + R + ++SDM P++S
Sbjct: 62 GSVIGVDLQRIKDLEDATLDERVETLRGD-MTEDKTRERVIDAAGGPVDAVVSDMAPNMS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A + A+ +L G
Sbjct: 121 GEYSLDQARSLYLARQAFETAL--------------------------------ELLDTG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GN ++K+ E D + + F+ PKA+R S EIY I +G
Sbjct: 149 GNFVVKVFEGPDVDDFRADIEDEFQYVRATSPKASREESSEIYFIAKG 196
>F8D3F4_HALXS (tr|F8D3F4) Ribosomal RNA large subunit methyltransferase E
OS=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 /
SH-6) GN=rlmE PE=3 SV=1
Length = 260
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 36/227 (15%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY ++++ GY +R+A+KL Q+ N+I G +V+DLG APG WLQVA + +GP
Sbjct: 5 DHYYNKSKQEGYRSRAAYKLKQLDDLENVIDRGDAVVDLGAAPGGWLQVAAEKVGPE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++K + RV TI D MT + + R + + ++SDM P++SG
Sbjct: 62 GRVVGVDLQRIKPFDDDINERVETIRGD-MTEERTRDRVIDAAEGKVDAVVSDMAPNMSG 120
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L GG
Sbjct: 121 EYSLDQARSLHLARQAFETAL--------------------------------ELLDTGG 148
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S E+Y I +G
Sbjct: 149 DFVVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEVYFIAKG 195
>M0PJN4_9EURY (tr|M0PJN4) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum aidingense JCM 13560 GN=rrmJ PE=3 SV=1
Length = 263
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 120/229 (52%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL Q+ + +++ SG +V+DLG APG WLQ+A + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLFDSGDTVVDLGAAPGGWLQIAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADV-MTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ D V TI D+ ++H LR + ++G V++SDM P+++
Sbjct: 62 GTVVGVDLQRID---DFDDHDVETIRGDMTQERTRHYLRE-AIGERGADVVISDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A D+A + +L G
Sbjct: 118 GEYSLDHARSVHLARQAFDVA--------------------------------EELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G+ ++K+ + ED + + F+ + P A+R SS E+YL+ +GL
Sbjct: 146 GDFVVKVFQGEDLDAFREDVRDEFQYLRTVSPPASRDSSSEVYLVAKGL 194
>L9WHL7_9EURY (tr|L9WHL7) Ribosomal RNA large subunit methyltransferase E
OS=Natronorubrum bangense JCM 10635 GN=rrmJ PE=3 SV=1
Length = 261
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 37/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY ++++ GY +R+A+KL Q+ N+I G +V+DLG APG WLQVA + +GP
Sbjct: 5 DQYYNKSKQEGYRSRAAYKLKQLDDLENVISGGDTVVDLGAAPGGWLQVAAEKVGPP--- 61
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
GSV+G+D++++K + + RV T+ D MT K + R + ++SDM P++S
Sbjct: 62 GSVIGVDLQRIKDLEDSTLNDRVETLRGD-MTEDKTRERVIDAAGGPVDAVVSDMAPNMS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A + A+ +L G
Sbjct: 121 GEYSLDQARSLYLARQAFETAL--------------------------------EILDTG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GN ++K+ E D + + F+ PKA+R S EIY I +G
Sbjct: 149 GNFVVKIFEGPDVDDFRADVEDEFQYVRVTSPKASREESSEIYFIAKG 196
>D2RTM3_HALTV (tr|D2RTM3) Ribosomal RNA large subunit methyltransferase E
OS=Haloterrigena turkmenica (strain ATCC 51198 / DSM
5511 / NCIMB 13204 / VKM B-1734) GN=rlmE PE=3 SV=1
Length = 261
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 37/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY +R+A+KL Q+ N+I +V+DLG APG WLQVA + +GP
Sbjct: 5 DDYYNRAKQQGYRSRAAYKLKQLDDLENVISGHDTVVDLGAAPGGWLQVAAEKVGPQ--- 61
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++K + + RV TI D MT K + R V++SDM P++S
Sbjct: 62 GTVIGVDLQRIKDLEDETLNERVETIRGD-MTEEKTRDRVTDAAGGSVDVVVSDMAPNMS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A + A+ +L G
Sbjct: 121 GEYSLDQARSLYLARQAFETAL--------------------------------ELLESG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GN ++K+ E D ++ F+ PKA+R S EIYLI +G
Sbjct: 149 GNFVVKVFEGPDVDDLRADIDDEFQYVRATAPKASREESSEIYLIGKG 196
>M0CJQ7_9EURY (tr|M0CJQ7) Ribosomal RNA large subunit methyltransferase E
OS=Haloterrigena salina JCM 13891 GN=rrmJ PE=3 SV=1
Length = 260
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 37/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY +R+A+KL Q+ N+I +V+DLG APG WLQVA + +GP
Sbjct: 5 DDYYNRAKQQGYRSRAAYKLKQLDDLENVISGHDTVVDLGAAPGGWLQVAAEKVGPQ--- 61
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++K + + RV TI D MT K + R V++SDM P++S
Sbjct: 62 GTVIGVDLQRIKDLEDETLNERVETIRGD-MTEEKTRDRVTDAAGGSVDVVVSDMAPNMS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A + A+ +L G
Sbjct: 121 GEYSLDQARSLYLARQAFETAL--------------------------------ELLESG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GN ++K+ E D ++ F+ PKA+R S EIYLI +G
Sbjct: 149 GNFVVKVFEGPDVDDLRADIDDEFQYVRATAPKASREESSEIYLIGKG 196
>M0DNJ5_9EURY (tr|M0DNJ5) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum tebenquichense DSM 14210 GN=rrmJ PE=3 SV=1
Length = 260
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI + +++ + G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIDEEADLFERGDTVVDLGAAPGGWLQVAAEEVG---EA 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + ++G V++SDM P+++
Sbjct: 62 GTVVGVDLQRIDDLDDHD---VETIRGDMTEERTRHYLRE-AVDEEGADVVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G T D A SV L +A D A +L G
Sbjct: 118 GEYTLDHARSVHLARQAFDAA--------------------------------DELLASG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G+ ++K+ + +D F+ + P A+R SS E+YL+ +G
Sbjct: 146 GDFVVKVFQGDDLDAFRDDVSEAFQYVRTVSPPASRDSSSEVYLVGKGY 194
>L0AFW7_NATGS (tr|L0AFW7) Ribosomal RNA large subunit methyltransferase E
OS=Natronobacterium gregoryi (strain ATCC 43098 / CCM
3738 / NCIMB 2189 / SP2) GN=rrmJ PE=3 SV=1
Length = 260
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 36/227 (15%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + ++I G +V+DLG APG WLQVA +++G
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELEDVISRGDTVVDLGAAPGGWLQVAAEAVGSE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++K D R+ T+ D MT + + R + V++SDM P++SG
Sbjct: 62 GQVIGVDLQRIKGFDDEIDDRIETLRGD-MTEERTRERVVDAAGGTVDVVVSDMAPNMSG 120
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A +L GG
Sbjct: 121 EYSLDQARSLHLARQAYETAT--------------------------------ELLDTGG 148
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ P+A+R S E+Y I +G
Sbjct: 149 DFVVKIFEGPDVDDFKDEIEEEFQYVRVTNPEASRKESSEVYFIAKG 195
>I7BST0_NATSJ (tr|I7BST0) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema sp. (strain J7-2) GN=rlmE PE=3 SV=1
Length = 257
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA + +GP
Sbjct: 4 DHYYNKAKQEGYRSRAAYKLKQLDRLENVIDRGDTVVDLGAAPGGWLEVAAEEVGPE--- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++ H V T+ D MT K + R + ++SDM P++SG
Sbjct: 61 GNVIGVDFQRIDDFEDH--DNVETLRGD-MTEDKTRKRVVDAADGSVDAVISDMAPNMSG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + AV +L GG
Sbjct: 118 EYSLDQARSLHLARQAFETAV--------------------------------ELLDSGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S E+Y I +G
Sbjct: 146 DFVVKVFEGPDVDDFRADAEAEFQYVRATSPKASRDESSEVYFIGKG 192
>L0K4X2_9EURY (tr|L0K4X2) Ribosomal RNA large subunit methyltransferase E
OS=Natronococcus occultus SP4 GN=rlmE PE=3 SV=1
Length = 261
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ N+I G +V+DLG APG WL+VA + +GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDDLENVISGGDTVVDLGAAPGGWLEVAAERVGPQ--- 61
Query: 68 GSVLGIDVKKVK--VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G V+G+D++++K P D RV TI D MT + + R V++SDM P++
Sbjct: 62 GRVVGVDLQRIKDLELPGGTD-RVETIRGD-MTEDRTRDRVTDAADGEVDVVISDMAPNM 119
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L +A + A+ +L
Sbjct: 120 SGEYSLDQARSLHLARQAFETAL--------------------------------ELLGS 147
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GGNL++K+ E D ++ + F+ P A+R SS E+Y + +G
Sbjct: 148 GGNLVVKVFEGPDVDDLRADIEDEFQYVRATAPDASRESSSELYFVAKG 196
>M0NV44_9EURY (tr|M0NV44) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum kocurii JCM 14978 GN=rrmJ PE=3 SV=1
Length = 265
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 40/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY +R+++KL QI + S + + G +V+DLG APG WLQVA + +G
Sbjct: 5 DEYYNRSKQQGYRSRASYKLKQIDEESALFERGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + ++G ++SDM P+++
Sbjct: 62 GTVVGVDLQRIDDFEEHD---VETIRGDMTEERTRHYLRE-AVGERGADAVISDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +A D+A + +L G
Sbjct: 118 GEYALDHARSVHLARQAFDVA--------------------------------EELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ ++K+ + ED + + F + P A+R SS E+YL+ +GL
Sbjct: 146 GDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGLN 195
>L9YZ98_9EURY (tr|L9YZ98) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema gari JCM 14663 GN=rrmJ PE=3 SV=1
Length = 257
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA + +GP
Sbjct: 4 DHYYNKAKQEGYRSRAAYKLKQLDRLENVIDRGDTVVDLGAAPGGWLEVAAEEVGPE--- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++ H V T+ D MT K + R + ++SDM P++SG
Sbjct: 61 GNVIGVDFQRIDDFEDH--DNVETLRGD-MTEDKTRKRVVDAADGSVDAVISDMAPNMSG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A +L GG
Sbjct: 118 EYSLDQARSLHLARQAFETA--------------------------------DELLDSGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S E+Y I +G
Sbjct: 146 DFVVKVFEGPDVDDFRADAEAEFQYVRATSPKASRDESSEVYFIGKG 192
>D3TAK8_ACIB4 (tr|D3TAK8) Ribosomal RNA large subunit methyltransferase E
OS=Aciduliprofundum boonei (strain DSM 19572 / T469)
GN=rlmE PE=3 SV=1
Length = 195
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 43/229 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+YY EA++ GY +R++FKLLQI +I+ G +VLDLG APG W QVA + +G
Sbjct: 5 DYYYWEAKKRGYKSRASFKLLQINDRFYLIRKGYTVLDLGAAPGGWSQVALKIVG---RE 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ +D+K VK+ V I DV S L+ + + + V+LSDM P +SG
Sbjct: 62 GRVIAVDIKPVKLRD------VEYIRGDVY--SDETLKRIKERAEKVDVVLSDMSPKISG 113
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+++ D A S++L RAL +A + VLR G
Sbjct: 114 ISSWDHARSIDLAERALFIA--------------------------------ENVLRERG 141
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ ++K+ + + + C+ F +PKA+ S EIY++C+ K
Sbjct: 142 HFVVKIFQGDMLNAYLKKCRDRFDMVKVHKPKASNRESPEIYVVCKRFK 190
>M0LW67_9EURY (tr|M0LW67) Ribosomal RNA large subunit methyltransferase E
OS=Halobiforma nitratireducens JCM 10879 GN=rrmJ PE=3
SV=1
Length = 258
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WLQVA + +GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELENVIDRGDTVVDLGAAPGGWLQVAAERVGP---D 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D++++ H V TI D MT + + R + ++SDM P++SG
Sbjct: 62 GTVIGVDLQRIDDLADH--DNVETIRGD-MTEERTRERVVDAADGTVDAVVSDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L GG
Sbjct: 119 EYSLDQARSLHLARQAFETAL--------------------------------ELLDTGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ P A+R S E+Y I +G
Sbjct: 147 DFVVKVFEGPDVDDFRADVEEEFQYVRATNPNASRDESSEVYFIGKG 193
>M0NXP8_9EURY (tr|M0NXP8) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum lipolyticum DSM 21995 GN=rrmJ PE=3 SV=1
Length = 265
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 118/230 (51%), Gaps = 40/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY +R+++KL Q+ + +++ + G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRSRASYKLKQLDEEADLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V T+ D+ ++H LR + ++G V++SDM P+++
Sbjct: 62 GTVIGVDLQRIDDLEEHD---VQTLRGDMTEERTRHYLRE-AVGERGADVVISDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +A D+A + +L G
Sbjct: 118 GEYALDHARSVHLARQAFDVA--------------------------------EELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ ++K+ + ED + + F + P A+R SS E+YL+ +GL
Sbjct: 146 GDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGLN 195
>E6VW50_DESAO (tr|E6VW50) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM
10631 / Aspo-2) GN=rlmE PE=3 SV=1
Length = 199
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 39/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K A++ Y ARS +KL ++ K + K G +VLDLG APGSW Q A + +GP H
Sbjct: 6 DKYFKRAKKENYAARSVYKLKEMDKRFGLFKKGQTVLDLGAAPGSWTQYAGERVGPEGH- 64
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
VL +D++ K + V + ADV + S L A+ P F +++SDM P +G
Sbjct: 65 --VLAVDIQDTKHT---FAANVTFLQADVFSDSPELLAAMEPLAP-FDLVISDMAPKTTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL RA ++A L+ GG
Sbjct: 119 IKFADQANSLELCERAFEVAAKR--------------------------------LKRGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
+ +K+ ES ++K + +P F K +P ++R S+EI+++ G
Sbjct: 147 HFAVKIFESGETKAYTDSLRPHFEKIKHFKPYSSRSESKEIFIVALGF 194
>F7PK64_9EURY (tr|F7PK64) Ribosomal RNA large subunit methyltransferase E
OS=Halorhabdus tiamatea SARL4B GN=rlmE PE=3 SV=1
Length = 256
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 38/226 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSAFKL Q+ + ++++ + +V+DLG APG WLQVA + LG G
Sbjct: 5 DKYYNRAKQQGYRARSAFKLRQLDETADLLGAERTVVDLGAAPGGWLQVAAERLG---DG 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D +++ P D V TI D+ S + A++ +++LSDM P+V+G
Sbjct: 62 GRVVGVDRQRID-PLEDTDVPVETIRGDITDEST--VEAITDAVGEANLVLSDMAPNVTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D A SV L +A ++A+ VL GG
Sbjct: 119 EYDLDHARSVHLARQAFEVAL--------------------------------DVLGAGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L++K+ + D +++ + F +RP A+R +S E+YL+ +
Sbjct: 147 DLVVKVFDGRDLEDLKADIEDEFEYVREVRPDASRDASSELYLVAK 192
>F0JBC1_DESDE (tr|F0JBC1) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio desulfuricans ND132 GN=rlmE PE=3 SV=1
Length = 199
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 111/230 (48%), Gaps = 41/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K A++ Y ARS +KL ++ K I K G +VLDLG APGSW Q A + +GP H
Sbjct: 6 DKYFKRAKKENYAARSVYKLKEMDKRFQIFKKGQTVLDLGAAPGSWSQFAGERVGPEGH- 64
Query: 68 GSVLGIDVKKVKVPPVHCDS-RVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
VLG+D++ K H + + + ADV + S L A+ P F VI+SDM P +
Sbjct: 65 --VLGVDLQTTK----HSFAGNITFLQADVFSDSPELLAAVEPLAP-FDVIISDMAPKTT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D A S+EL RA ++A+ L+ G
Sbjct: 118 GIKFADQANSLELCERAFEVAL--------------------------------KYLKKG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ +K+ E + + +P F + +P ++R S+EI+++ G K
Sbjct: 146 GSFAVKIFEGGEINDYRDAIRPYFARIKNFKPYSSRSESKEIFIVALGFK 195
>C7P5L8_METFA (tr|C7P5L8) Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus fervens (strain DSM 4213 / JCM
157852 / AG86) GN=rlmE PE=3 SV=1
Length = 246
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 42/229 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYYK A++L Y +R++FKL+Q+ + N+IK G VLDLGCAPG W+QVA + +G
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGRIVLDLGCAPGGWMQVAREIVG---DK 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK--HQLRALSP-KQKGFSVILSDMCPS 124
G V+GID++ VK P D+ V I D TL + +++R L P ++K V++SD P+
Sbjct: 72 GFVIGIDLQPVK--PFEYDN-VRAIKGD-FTLEENLNKIRELIPNEEKKVDVVISDASPN 127
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SG D A S++L AL +A +L+
Sbjct: 128 ISGYWDVDHARSIDLVTTALQIAT--------------------------------EMLK 155
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GN + K+ + ++ K F K +P+A+R S E+Y+I +
Sbjct: 156 ERGNFVAKVFYGNMIDDYVKLVKKYFEKVYITKPQASRKESAEVYVIAK 204
>D3S884_METSF (tr|D3S884) Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus sp. (strain FS406-22) GN=rlmE PE=3
SV=1
Length = 246
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYYK A++L Y +R++FKL+Q+ + N+IK G VLDLGCAPG W+QVA + +G
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSP-KQKGFSVILSDMCPSVS 126
G ++GID++ VK P D+ V + S +++R L P ++K V++SD P++S
Sbjct: 72 GFIIGIDLQPVK--PFEYDNVVAIKGDFTLEESLNKIRELIPNEEKKVDVVISDASPNIS 129
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A S++L AL +A +L+
Sbjct: 130 GYWDIDHARSIDLVTTALQIAT--------------------------------EMLKER 157
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GN + K+ + + + K F K +P+A+R S E+Y+I +
Sbjct: 158 GNFVAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204
>L9ZGP1_9EURY (tr|L9ZGP1) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema altunense JCM 12890 GN=rrmJ PE=3 SV=1
Length = 257
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA + +GP
Sbjct: 4 DHYYNKAKQEGYRSRAAYKLKQLDQLENVIDRGDTVVDLGAAPGGWLEVAAEEVGPE--- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++ H V T+ D MT K + R + ++SDM P++SG
Sbjct: 61 GNVIGVDFQRIDDFADH--DTVETLRGD-MTEDKTRKRVVDAADGSVDAVISDMAPNMSG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L GG
Sbjct: 118 EYSLDQARSLHLARQAFETAL--------------------------------ELLDSGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S E+Y I +G
Sbjct: 146 DFVVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEVYFIGKG 192
>L9VG57_9EURY (tr|L9VG57) Ribosomal RNA large subunit methyltransferase E
OS=Natronorubrum tibetense GA33 GN=rrmJ PE=3 SV=1
Length = 261
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY +R+A+KL Q+ N+I+ +V+DLG APG WLQVA + +GP
Sbjct: 5 DDYYNRAKQQGYRSRAAYKLKQLDDLENVIEGRDTVVDLGAAPGGWLQVAAEKVGPQ--- 61
Query: 68 GSVLGIDVKKVK--VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G+V+G+D++++K P D +V T+ D MT K + R + ++SDM P++
Sbjct: 62 GTVIGVDLQRIKDLEDPALVD-QVETLRGD-MTEEKTRERVVEAAGGKVDAVVSDMAPNM 119
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L +A + A+ +L
Sbjct: 120 SGEYSLDQARSLYLARQAFETAL--------------------------------ELLDT 147
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GGN ++K+ E D E + F+ PKA+R S EI+ I +G
Sbjct: 148 GGNFVVKVFEGPDVDEFRADVEEEFQYVRVTSPKASREESSEIFFIAKG 196
>M0AGG8_NATA1 (tr|M0AGG8) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba asiatica (strain ATCC 700177 / DSM 12278 /
JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) GN=rrmJ
PE=3 SV=1
Length = 258
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N++ G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELENVLSRGDTVVDLGAAPGGWLEVAAEAVGP---D 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++K H + TI D MT + + R + +LSDM P++SG
Sbjct: 62 GQVIGVDLQRIKDIEDH--DTIETIRGD-MTEERTRDRVIDAAGGEVDAVLSDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L G
Sbjct: 119 EYSLDQARSLHLARQAFETAL--------------------------------ELLDTDG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D E + F+ PKA+R S E+Y I +G
Sbjct: 147 DFVVKIFEGPDVDEFRADVEEEFQYVRATSPKASRDESSELYFIGKG 193
>L9ZT46_9EURY (tr|L9ZT46) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba taiwanensis DSM 12281 GN=rrmJ PE=3 SV=1
Length = 258
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N++ G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELENVLSRGDTVVDLGAAPGGWLEVAAEAVGP---D 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++K H + TI D MT + + R + +LSDM P++SG
Sbjct: 62 GQVIGVDLQRIKDIEGH--DTIETIRGD-MTEERTRDRVIDAAGGEVDAVLSDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L G
Sbjct: 119 EYSLDQARSLHLARQAFETAL--------------------------------ELLDTDG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D E + F+ PKA+R S E+Y I +G
Sbjct: 147 DFVVKIFEGPDVDEFRADVEEEFQYVRATSPKASRDESSELYFIGKG 193
>L9XYL9_9EURY (tr|L9XYL9) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema versiforme JCM 10478 GN=rrmJ PE=3 SV=1
Length = 258
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + ++I G +V+DLG APG WL+VA + +GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDQLEDVIDRGDTVVDLGAAPGGWLEVAAEEVGPE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++K H V T+ D MT K + R + V++SDM P++SG
Sbjct: 62 GNVIGVDFQRIKEFDDH--DNVETLRGD-MTEEKTRDRVIDAAGGPVDVVISDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L G
Sbjct: 119 EYSLDQARSLHLARQAFETAI--------------------------------ELLDNDG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S E+Y I +G
Sbjct: 147 DFVVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEVYFIGKG 193
>M0NTZ4_9EURY (tr|M0NTZ4) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum litoreum JCM 13561 GN=rrmJ PE=3 SV=1
Length = 263
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIAEEADLLAPGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + + G +LSDM P+++
Sbjct: 62 GTVVGVDLQRIDELDEH---DVETIRGDMTEERTRHYLRE-AVGEGGADAVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD A +L G
Sbjct: 118 GEYNLDHARSVHLARQALDAA--------------------------------DELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVADSFQYVRTVSPPASRDASSEVYLVAKG 193
>M0F6C1_9EURY (tr|M0F6C1) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum distributum JCM 10118 GN=rrmJ PE=3 SV=1
Length = 263
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIAEEADLLAPGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + + G +LSDM P+++
Sbjct: 62 GTVVGVDLQRIDELDEH---DVETIRGDMTEERTRHYLRE-AVGEGGADAVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD A +L G
Sbjct: 118 GEYNLDHARSVHLARQALDAA--------------------------------DELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVADSFQYVRTVSPPASRDASSEVYLVAKG 193
>M0EJJ1_9EURY (tr|M0EJJ1) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum distributum JCM 9100 GN=rrmJ PE=3 SV=1
Length = 263
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIAEEADLLAPGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + + G +LSDM P+++
Sbjct: 62 GTVVGVDLQRIDELDEH---DVETIRGDMTEERTRHYLRE-AVGEGGADAVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD A +L G
Sbjct: 118 GEYNLDHARSVHLARQALDAA--------------------------------DELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVADSFQYVRTVSPPASRDASSEVYLVAKG 193
>M0LM50_9EURY (tr|M0LM50) Ribosomal RNA large subunit methyltransferase E
OS=Halobiforma lacisalsi AJ5 GN=rrmJ PE=3 SV=1
Length = 258
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + +I G +V+DLG APG WLQVA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELEGVIDRGDTVVDLGAAPGGWLQVAAETVGPE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++ H V TI D MT + + R + ++SDM P++SG
Sbjct: 62 GKVIGVDLQRIDDLEDH--DNVETIRGD-MTEDRTRERVIDAAGGEVDAVVSDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L GG
Sbjct: 119 EYSLDQARSLHLARQAFETAL--------------------------------ELLDAGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S EIY I +G
Sbjct: 147 DFVVKVFEGPDVDDFRAEVEEEFQYVRATSPKASRDESSEIYFIGKG 193
>M0PRC0_9EURY (tr|M0PRC0) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum arcis JCM 13916 GN=rrmJ PE=3 SV=1
Length = 261
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL Q+ + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLLGPGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D+++++ H + T+ D+ ++H LR + + G V+LSDM P+++
Sbjct: 62 GTVVGVDLQRIEELDDHD---IETLRGDMTEERTRHYLRE-AVDEGGADVVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +ALD A +L G
Sbjct: 118 GEYSLDHARSVHLARQALDTA--------------------------------DELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + +D F+ + P A+R SS E+YL+ +G
Sbjct: 146 GDFVVKVFQGQDLDAFRDDVADSFQYVRTVSPPASRDSSSEVYLVAKG 193
>L9YWG8_9EURY (tr|L9YWG8) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema pallidum DSM 3751 GN=rrmJ PE=3 SV=1
Length = 257
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ N+I G +V+DLG APG WL+VA + +GP
Sbjct: 4 DHYYNKAKQEGYRSRAAYKLKQLDALENVIDRGDTVVDLGAAPGGWLEVAAEEVGPE--- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++ H V T+ D MT K + R + V++SDM P++SG
Sbjct: 61 GNVIGVDFQRIDDFADH--DTVETLRGD-MTEDKTRKRVVDAAGGPVDVVVSDMAPNMSG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A A+ +L GG
Sbjct: 118 EYSLDQARSLHLARQAFQTAL--------------------------------ELLDSGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S EIY I +G
Sbjct: 146 DFVVKVFEGPDVDDFRADVEAEFQYVRATSPKASRDESSEIYFIGKG 192
>L0JGV1_NATP1 (tr|L0JGV1) Ribosomal RNA large subunit methyltransferase E
OS=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 /
NCIMB 786) GN=rrmJ PE=3 SV=1
Length = 257
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 6 APDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQ 65
A D YY +A++ GY +R+A+KL Q+ + ++I G +V+DLG APG WL+VA + +GP
Sbjct: 2 ARDHYYNKAKQEGYRSRAAYKLKQLDRLEDVIDRGDTVVDLGAAPGGWLEVAAEEVGPE- 60
Query: 66 HGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G V+G+D +++ H V T+ D MT K + R + ++SDM P++
Sbjct: 61 --GQVIGVDFQRIDDFADH--DNVETLRGD-MTEDKTRKRVVDAADGTVDAVISDMAPNM 115
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L +A + A+ +L
Sbjct: 116 SGEYSLDQARSLHLARQAFETAL--------------------------------ELLEA 143
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG+ ++K+ E D + + F+ P A+R S E+Y I +G
Sbjct: 144 GGDFVVKVFEGPDVDDFRADVEEEFQYVRATSPDASRDESSEVYFIGKG 192
>M0B844_9EURY (tr|M0B844) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba aegyptia DSM 13077 GN=rrmJ PE=3 SV=1
Length = 258
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N++ G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDELENVLSRGDTVVDLGAAPGGWLEVAAEAVGP---D 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++++K + V TI D MT + + R + +LSDM P++SG
Sbjct: 62 GQVIGVDLQRIK--DIEGHDTVETIRGD-MTEERTRDRVIDAAGGEVDAVLSDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + A+ +L G
Sbjct: 119 EYSLDQARSLHLARQAFETAL--------------------------------ELLDTDG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D E + F+ PKA+R S E++ I +G
Sbjct: 147 DFVVKIFEGPDVDEFRADVEEEFQYVRATSPKASRDESSELFFIGKG 193
>L9XF06_9EURY (tr|L9XF06) Ribosomal RNA large subunit methyltransferase E
OS=Natronococcus amylolyticus DSM 10524 GN=rrmJ PE=3
SV=1
Length = 261
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ N+I G +V+DLG APG WL+VA + +GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDDLENVISGGDTVVDLGAAPGGWLEVAAERVGPQ--- 61
Query: 68 GSVLGIDVKKVK--VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G V+G+D++++K P D R+ TI D MT + + R V++SDM P++
Sbjct: 62 GRVIGVDLQRIKDLEMPGGTD-RIETIRGD-MTEDRTRDRVTDAAAGSVDVVVSDMAPNM 119
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L +A + A+ +L
Sbjct: 120 SGEYSLDQARSLHLARQAFETAL--------------------------------DLLDS 147
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GGN ++K+ + D + + F+ P A+R SS E+Y I +G
Sbjct: 148 GGNFLVKVFDGPDVDALRADLEGEFQYVRATAPDASRESSSELYFIAKG 196
>M5PV51_DESAF (tr|M5PV51) 23S rRNA 2'-O-methyltransferase OS=Desulfovibrio
africanus PCS GN=PCS_01335 PE=4 SV=1
Length = 208
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 45/232 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ Y ARS +KL +I K I++ G VLDLG APGSW A + +G G
Sbjct: 6 DHYFKQAKKDNYPARSVYKLQEINKRFGILRPGQKVLDLGAAPGSWTLFAAKVVG---QG 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSPKQKGFSVILSDMCPS 124
G VLG+D++ + V + DV + L L+P F V++SDM P
Sbjct: 63 GKVLGVDLQSTA---TDFPANVRFLVGDVFEPPVEVQAALEELAP----FDVVVSDMAPK 115
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
SG+ +D A S +L +RAL++A DK + +
Sbjct: 116 TSGIIFRDQAFSFDLCVRALEVA-------------------------------DKHLAK 144
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GGN + K+ E D K+ + + + F +P+++R S+E + I G K
Sbjct: 145 -GGNFVAKIFEGPDVKQFAAMLRERFNTVKNFKPQSSRSESKETFYIGLGFK 195
>M0DHT4_9EURY (tr|M0DHT4) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum terrestre JCM 10247 GN=rrmJ PE=3 SV=1
Length = 263
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIAAEADLLAPGDTVVDLGAAPGGWLQVAAEEVG---ES 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D++++ H V TI D+ ++H LR + + G +LSDM P+++
Sbjct: 62 GTVVGVDLQRIDELDEH---DVETIRGDMTEERTRHYLRE-AVGEGGADAVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD A +L G
Sbjct: 118 GEYNLDHARSVHLARQALDAA--------------------------------DELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVADSFQYVRTVSPPASRDASSEVYLVAKG 193
>L9XTT0_9EURY (tr|L9XTT0) Ribosomal RNA large subunit methyltransferase E
OS=Natronococcus jeotgali DSM 18795 GN=rrmJ PE=3 SV=1
Length = 261
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 37/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ N+I +V+DLG APG WL+VA + +GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDDLENVISGSDTVVDLGAAPGGWLEVAAERVGPQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDS-RVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D++++K V + RV TI D MT + + R V++SDM P++S
Sbjct: 62 GQVVGVDLQRIKDLEVGGGTDRVETIRGD-MTEQRTRDRVTDAAGGAVDVVISDMAPNMS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A + A+ +L G
Sbjct: 121 GEYSLDQARSLHLARQAFETAL--------------------------------DLLDSG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GN + K+ E D + F+ P A+R SS E+YL+ +G
Sbjct: 149 GNFVAKVFEGPDVDAFRADLEDEFQYVRATAPDASRESSSELYLVAKG 196
>M0C1D5_9EURY (tr|M0C1D5) Ribosomal RNA large subunit methyltransferase E
OS=Haloterrigena thermotolerans DSM 11522 GN=rrmJ PE=3
SV=1
Length = 257
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 38/229 (16%)
Query: 6 APDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQ 65
A D YY +A++ GY +R+A+KL Q+ + ++I G +V+DLG APG WL+VA + +GP
Sbjct: 2 ARDHYYNKAKQEGYRSRAAYKLKQLDRLEDVIDRGDTVVDLGAAPGGWLEVAAEEVGPE- 60
Query: 66 HGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G V+G+D +++ H V T+ D MT K + R + ++SDM P++
Sbjct: 61 --GKVIGVDFQRIDDFADH--DNVETLRGD-MTEEKTRKRVVDAADGTVDAVISDMAPNM 115
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L +A + A +L
Sbjct: 116 SGEYSLDQARSLHLARQAFETAC--------------------------------ELLEA 143
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG+ ++K+ E D + + F+ P A+R S E+Y I +G
Sbjct: 144 GGDFVVKVFEGPDVDDFRADVEEEFQYVRATSPDASRDESSEVYFIGKG 192
>L0HPX9_ACIS0 (tr|L0HPX9) Ribosomal RNA large subunit methyltransferase E
OS=Aciduliprofundum sp. (strain MAR08-339) GN=rlmE PE=3
SV=1
Length = 195
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 49/232 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYY EA+R GY +R++FKLLQI II+ G VLDLG +PG W QVA + +G
Sbjct: 5 DFYYWEAKRRGYRSRASFKLLQINDRFYIIRPGYRVLDLGASPGGWSQVALKLVG---EE 61
Query: 68 GSVLGIDVKKVKVPPVHC---DSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPS 124
G V+G+DVK +KV V + I +M + + V++SDM P+
Sbjct: 62 GMVIGVDVKPIKVSGVKFVRGNVYDEDIVQRIMRYTDY-----------VDVVISDMAPN 110
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV + D A SV+L RAL +A + +LR
Sbjct: 111 ISGVASWDHARSVDLAERALFIA--------------------------------EKMLR 138
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+L++K+ + + + + CK F +P+A+ +S E+Y++C+ K
Sbjct: 139 ERGHLLVKVFQGDMLEGFRRKCKKRFELVKVHKPRASNRASPEVYVVCKRFK 190
>C7NRM8_HALUD (tr|C7NRM8) Ribosomal RNA large subunit methyltransferase E
OS=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 /
AX-2) GN=rlmE PE=3 SV=1
Length = 256
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 38/226 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSAFKL Q+ + ++++ + +V+DLG APG WLQVA + LG G
Sbjct: 5 DKYYNRAKQQGYRARSAFKLRQLDETADLLGAERTVVDLGAAPGGWLQVAAERLG---DG 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D +++ D V TI D+ S + A++ +++LSDM P+V+G
Sbjct: 62 GRVVGVDRQRID-DLEEPDVPVETIRGDITDEST--VEAITDAVGEANLVLSDMAPNVTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D A SV L +A ++++ VL GG
Sbjct: 119 EYDLDHARSVHLARQAFEVSL--------------------------------DVLGAGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L++K+ + D ++ + F +RP A+R SS E+YL+ +
Sbjct: 147 DLVVKVFDGRDLDDLKTDIEEEFEYVREVRPDASRDSSSELYLVAK 192
>M0IED3_9EURY (tr|M0IED3) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax mucosum ATCC BAA-1512 GN=rrmJ PE=3 SV=1
Length = 257
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 38/226 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDEDAGLFGPGNTVVDLGAAPGGWLQVASERVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D+++++ H + TI D+ + S + G ++SDM P+++G
Sbjct: 62 GKVVGVDLQRIRDLDHH---NIETIRGDMTEDETKERLTASIGEAGADAVVSDMAPNMTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A ++A + +L GG
Sbjct: 119 EYSLDHARSIYLARQAFEVA--------------------------------QELLATGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+ +K+ + +D + +P F+ +RPKA+R SS E YL+ +
Sbjct: 147 DFAVKVFDGQDLADFRADMEPEFQYVRSIRPKASRDSSSEQYLVGK 192
>M0GVV9_9EURY (tr|M0GVV9) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax larsenii JCM 13917 GN=rrmJ PE=3 SV=1
Length = 257
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDREAGLFGPGNTVVDLGAAPGGWLQVASEKVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ H V T+ D+ +K QL+ + +Q G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIRDIDHH---NVETVRGDMTEDDTKEQLKDIVGEQ-GADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A ++A + +L G
Sbjct: 118 GEYSLDHARSIYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + +D + +P F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGQDLADFRADMEPEFQYVRSIRPDASRDSSSEQYLVGK 192
>F8C2F7_THESO (tr|F8C2F7) Ribosomal RNA large subunit methyltransferase E
OS=Thermodesulfobacterium sp. (strain OPB45) GN=rlmE
PE=3 SV=1
Length = 202
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 41/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + K+A+ GY ARS FKL++IQ+ II+ G VLDLG +PGSW + A +G
Sbjct: 8 DKWAKKAKEKGYPARSVFKLMEIQEKYKIIQKGDIVLDLGASPGSWSKYALSIVG---EK 64
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+GID+ +K+ + + DV L ++ + L ++ V+LSDM P +G
Sbjct: 65 GKVIGIDILPIKI----SHPNFYFLQKDVFELEENDFKNLGIEK--VDVLLSDMAPKTTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D SV L +AL++A K L+ GG
Sbjct: 119 DKFGDHVRSVRLAEKALEIA--------------------------------KNYLKEGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ ++K+ E E + + + F+ + +PK++R S+EI++I QG K
Sbjct: 147 SFVVKVFEGEKIPILKRQIEKYFKSVKFFKPKSSRKESKEIFIIAQGFK 195
>L0IF14_HALRX (tr|L0IF14) Ribosomal RNA large subunit methyltransferase E
OS=Halovivax ruber (strain DSM 18193 / JCM 13892 /
XH-70) GN=rlmE PE=3 SV=1
Length = 269
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 111/236 (47%), Gaps = 44/236 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ +I G +VLDLG APG WLQVA + +GP
Sbjct: 5 DHYYNKAKQEGYRARSAYKLQQLDDLEGLIDRGDTVLDLGAAPGGWLQVAAERVGPE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRA-----LSPKQKG-FSVIL 118
G+V+G+D +++ D R+ T+ DV TL + + A S ++G V+L
Sbjct: 62 GTVIGVDFQRIDGFDDEIDDRIETLRGDVTEAKTLDRIRRAAGASDGESNGERGAVDVVL 121
Query: 119 SDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSD 178
SDM P+V+G + D A S+ L A ++A+
Sbjct: 122 SDMAPNVTGEYSLDQARSLHLARTASEVAL------------------------------ 151
Query: 179 DKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+L GG K+ E D + + F+ PKATR S E+YL+ G
Sbjct: 152 --ELLETGGTFAAKVFEGPDVDDFRADLEDEFQYVRATVPKATRDESSELYLLGIG 205
>G0LFR1_HALWC (tr|G0LFR1) Ribosomal RNA large subunit methyltransferase E
OS=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 /
C23) GN=rlmE PE=3 SV=1
Length = 256
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 38/226 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY RSA+KL QI + + G++V+DLG APG WLQVA +++GP
Sbjct: 5 DEYYNRAKQEGYRTRSAYKLQQIDADAGVFGPGNTVIDLGAAPGGWLQVAAEAVGP---S 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D ++++ + D V TI D+ S V+LSDM P+++G
Sbjct: 62 GTVIGVDFQRIR--DLESDI-VDTIRGDMTDESTKNALRKRVNNSSVDVVLSDMAPNMTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A +A +L GG
Sbjct: 119 EYSVDHARSIHLARQAFSVAT--------------------------------DILPAGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+ I+K+ + D + Q F +RP A+R SS E YL+ +
Sbjct: 147 DFIVKVFDGRDLADFRQDVDTEFEYVKSIRPDASRDSSSEQYLVGK 192
>M0BHM9_9EURY (tr|M0BHM9) Ribosomal RNA large subunit methyltransferase E
OS=Halovivax asiaticus JCM 14624 GN=rrmJ PE=3 SV=1
Length = 270
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ +I G +VLDLG APG WLQVA + +GP
Sbjct: 5 DHYYNKAKQEGYRARSAYKLQQLDDLEGLIDRGDTVLDLGAAPGGWLQVAAERVGPE--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFS---------VI 117
G+V+G+D +++ D R+ T+ DV T + ++R + G S V+
Sbjct: 62 GTVIGVDFQRIDGFDDEIDDRIETLRGDVTETKTLDRIRRAAGASDGESNGERGGAVDVV 121
Query: 118 LSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGS 177
LSDM P+V+G + D A S+ L A ++A+
Sbjct: 122 LSDMAPNVTGEYSLDQARSLHLARTASEVAL----------------------------- 152
Query: 178 DDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+L GG K+ E D + + F+ P ATR S E+YL+ G
Sbjct: 153 ---ELLETGGTFAAKVFEGPDVDDFRADLEDEFQYVRATVPNATRDESSELYLLGIG 206
>D8F3Q4_9DELT (tr|D8F3Q4) Ribosomal RNA large subunit methyltransferase E
OS=delta proteobacterium NaphS2 GN=rrmJ PE=3 SV=1
Length = 197
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 43/236 (18%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M ++ D Y ++A++ ++ARS +KL +I + +I+ +VLDLGC PGSW Q
Sbjct: 1 MKSNRWDDHYTEKARKEKWLARSVYKLQEIDRKFKLIRRNDTVLDLGCFPGSWSQYV--- 57
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRA-LSPKQKGFSVILS 119
+G + GG+V+GID++K P + AD+ T+ QL A + P+ +++LS
Sbjct: 58 IGKVGKGGNVVGIDLQK---PKAFNPPNFTYMKADIETVDPEQLSARIEPR----NLVLS 110
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
D+ P +G+ DA+ S+ L RA ++A
Sbjct: 111 DLAPPTTGIRDTDASRSLFLAERAAEIA-------------------------------- 138
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
+ +L+ G+ + K+ E E K+ + P F + RPKATR SRE+YL+ G
Sbjct: 139 RMLLKPKGHFVCKIFEDEALKDFKKDLGPAFGQIRLFRPKATRKRSREVYLVATGF 194
>F3YV56_DESAF (tr|F3YV56) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio africanus str. Walvis Bay GN=rlmE PE=3
SV=1
Length = 208
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ Y ARS +KL +I K I++ G VLDLG APGSW A + +G G
Sbjct: 6 DHYFKQAKKDNYPARSVYKLQEINKRFGILRPGQKVLDLGAAPGSWTLFAAKVVG---QG 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G VLG+D++ V + DV +++A + F V++SDM P SG
Sbjct: 63 GKVLGVDLQSTS---TDFPDNVRFLVGDVFE-PPAEVQAAMEELAPFDVVVSDMAPKTSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ +D A S +L +RAL++A DK L GG
Sbjct: 119 IIFRDQAFSFDLCVRALEVA-------------------------------DK-YLAKGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
N + K+ E D ++ + + + F +P+++R S+E + I G K
Sbjct: 147 NFVAKIFEGPDVRQFAAMLRERFVTVKNFKPQSSRSESKETFYIGLGFK 195
>I3R109_HALMT (tr|I3R109) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax mediterranei (strain ATCC 33500 / DSM 1411
/ JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) GN=ftsJ PE=3
SV=1
Length = 257
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDEDAGLFGPGNTVVDLGAAPGGWLQVASEKVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ H + TI D+ +K QL + + G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIRDLDRH---NIETIRGDMTEDETKEQLTDI-IGEAGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A ++A + +L G
Sbjct: 118 GEYSLDHARSIYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + +D + +P F+ +RPKA+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGQDLADFRADMEPEFQYVRSIRPKASRDSSSEQYLVGK 192
>G4IBS6_9EURY (tr|G4IBS6) Ribosomal RNA large subunit methyltransferase E
OS=Halobacterium sp. DL1 GN=rlmE PE=3 SV=1
Length = 257
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 39/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY ++++ GY R+A+KL QI ++ G++V+DLG APG WLQVA + G
Sbjct: 6 DHYYNKSKQEGYRTRAAYKLQQIDDEFGLLFGGATVVDLGAAPGGWLQVAAEEAGAR--- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTL-SKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D +++ + ++ TI D+ ++ Q+R + G V+LSDM P+++
Sbjct: 63 GRVIGVDFQRID--DIDTEAGFQTIRGDMTEEDTREQIRQ-AAGSSGVDVVLSDMAPNMT 119
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD A RE VL G
Sbjct: 120 GEYNLDHARSVHLARQALDTA------------------RE--------------VLVDG 147
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + +D KE + F + P A+R SS E+Y++ +
Sbjct: 148 GHFAVKVFDGQDFKEFLADVEEEFAFTRTYTPDASRDSSSELYVVAK 194
>M0CBB8_9EURY (tr|M0CBB8) Ribosomal RNA large subunit methyltransferase E
OS=Haloterrigena limicola JCM 13563 GN=rrmJ PE=3 SV=1
Length = 258
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ ++ G +V+DLG APG WL+VA + +G
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDDLEHVFDRGDTVVDLGAAPGGWLEVAAEEVGSQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D +++K H V T+ D MT K + R + ++SDM P++SG
Sbjct: 62 GNVIGVDFQRIKDFDDH--DNVETLRGD-MTEEKTRDRVIDAAGGSVDAVISDMAPNMSG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L +A + ++ +L GG
Sbjct: 119 EYSLDQARSLHLARQAFETSL--------------------------------ELLDSGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ ++K+ E D + + F+ PKA+R S EIYLI +G
Sbjct: 147 DFVVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEIYLIGKG 193
>M0MGA2_9EURY (tr|M0MGA2) Ribosomal RNA large subunit methyltransferase E
OS=Halococcus saccharolyticus DSM 5350 GN=rrmJ PE=3 SV=1
Length = 251
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 45/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +RSA+KL Q+ +++I SG +V+DLG APG WLQVA +
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDDTADLIASGDTVIDLGAAPGGWLQVAAERT----DD 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRA-LSPKQKGFSVILSDMCPSVS 126
G V+G+D ++++ D V T+ D L++ +A L+ + ++LSDM P+++
Sbjct: 61 GRVVGVDRQRIE----SIDG-VETVRGD---LTEDDTQAELAERVGEADLVLSDMAPNMT 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD+A + VL G
Sbjct: 113 GEYDLDHARSVHLARQALDVA--------------------------------RTVLAPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+L++K+ + D ++ + F +RP+A+R S E+YL+ +G
Sbjct: 141 GDLVVKVFDGRDLDDLEADIEDEFEYVRTVRPEASRDESSELYLVGKG 188
>C9RGY4_METVM (tr|C9RGY4) Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus vulcanius (strain ATCC 700851 /
DSM 12094 / M7) GN=rlmE PE=3 SV=1
Length = 248
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 44/230 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYYK A++L Y +R++FKL+Q+ + N+IK +LDLGCAPG W+QVA + +G
Sbjct: 15 DFYYKLAKKLQYRSRASFKLMQLNEKFNVIKPRKIILDLGCAPGGWMQVAREIVG---DD 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSP-KQKGFSVILSDMCP 123
G V+G+D++ VK P D+ V I D TL+K +R L P ++K V++SD P
Sbjct: 72 GFVIGVDLQPVK--PFGYDN-VVAIKGDFTSEETLNK--IRELIPNEEKKVDVVISDASP 126
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG D A S++L AL +A +L
Sbjct: 127 NISGYWDVDHARSIDLVTTALQIAT--------------------------------EML 154
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+ GN + K+ + + ++ K F K +P+A+R S E+Y+I +
Sbjct: 155 KERGNFVAKVFYGDMIDDYVKLVKKYFEKVYITKPQASRKESAEVYVIAK 204
>E1QM08_DESB2 (tr|E1QM08) Ribosomal RNA large subunit methyltransferase E
OS=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 /
VKM B-1802 / 2st14) GN=rlmE PE=3 SV=1
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 41/236 (17%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
MG+ D YY+ A++ G+ ARS +KL ++ + +++ G VLD+GC PGSWLQ A
Sbjct: 1 MGSRKDQDSYYRRAKQEGFAARSVYKLQEMDQRYGLLRQGMRVLDIGCHPGSWLQYAAGR 60
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
+GP GG VLG+D++++ V I ADV+ L+ ++ A++P F V+LSD
Sbjct: 61 VGP---GGLVLGVDIQELA---VDLPRWGRFIQADVLKLTPAEVLAVAP---AFDVVLSD 111
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
+ P +GV D A S+ + DLA+
Sbjct: 112 VAPRTTGVRHADEAASLAMLEAVFDLAL-------------------------------- 139
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
VLR GG+ + K+ ++ K F+ +P A++ +S+EIY++ + LK
Sbjct: 140 AVLRPGGSFLAKVYFGPGVDQLIHQVKGRFKLGKGHKPAASKAASKEIYILGRELK 195
>M0HW13_9EURY (tr|M0HW13) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax elongans ATCC BAA-1513 GN=rrmJ PE=3 SV=1
Length = 257
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDSETGLFGPGNTVVDLGAAPGGWLQVASEKVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ H V T+ D+ +K +L+ + +Q G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIRDIDHH---NVETVRGDMTEDDTKEKLKDIVGEQ-GADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A ++A + +L G
Sbjct: 118 GEYSLDHARSIYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + +D + +P F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGQDLADFRADMEPEFQYVRSIRPDASRDSSSEQYLVGK 192
>F2KNN6_ARCVS (tr|F2KNN6) Ribosomal RNA large subunit methyltransferase E
OS=Archaeoglobus veneficus (strain DSM 11195 / SNP6)
GN=rlmE PE=3 SV=1
Length = 209
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 45/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+YY EA++ GY +R+AFKLLQ+ K +IK GS VLDLG +PG W QVA ++ G
Sbjct: 12 DYYYWEAKKKGYRSRAAFKLLQMNKTFKLIKKGSKVLDLGASPGGWSQVA------VELG 65
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
V+ +D+ +PP+ + + TL K ++A+S + + ++ D P ++G
Sbjct: 66 AEVVAVDIN--PMPPIEGVTFIQGDITKEETLEK--IKAVS---REYDAVICDASPKITG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D +S++L A ++A + VL+ GG
Sbjct: 119 HWSIDHLISMDLARAAFNIA--------------------------------RQVLKPGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
N ++K+ + E+ +++ KP FR P A+R S EIY I + K
Sbjct: 147 NFVVKMFQGEEIQKVFNEFKPYFRFKKLHSPPASRKRSAEIYFIGKRFK 195
>D6SRF7_9DELT (tr|D6SRF7) Ribosomal RNA large subunit methyltransferase E
OS=Desulfonatronospira thiodismutans ASO3-1 GN=rlmE PE=3
SV=1
Length = 198
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 44/226 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y ++A++ Y ARS +KL ++ + ++++ G VLDLG +PGSW A Q +Q
Sbjct: 6 DHYSRQARQDNYPARSVYKLKEMDRRFSLLRPGQKVLDLGASPGSWCSFAAQK---VQSR 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM--TLSKHQLRALSPKQKGFSVILSDMCPSV 125
G VL +D+K+ P + V I D++ ++ Q+R +P F ++LSDM P
Sbjct: 63 GFVLAVDLKE---PTLSFPQHVVFIQGDIINDNAAREQVRDFAP----FDLVLSDMAPKT 115
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+G+ D A S EL A DLA + +L
Sbjct: 116 TGIKITDQARSHELAREAFDLA--------------------------------REMLGP 143
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
GG++++K+ E D +E+ + K F++ +PK++R S+EI+L+
Sbjct: 144 GGSMVVKIFEGPDVQELGREMKACFKRVKHFKPKSSRAESKEIFLV 189
>L0GWY0_9GAMM (tr|L0GWY0) Ribosomal RNA large subunit methyltransferase E
OS=Thioflavicoccus mobilis 8321 GN=rlmE PE=3 SV=1
Length = 207
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y AQ+LGY +R+AFKLL++Q+ ++ G VLDLG APG W QVA Q +GP
Sbjct: 19 DDYVIRAQKLGYRSRAAFKLLELQEKDRLLGRGMRVLDLGAAPGGWSQVATQLVGPR--- 75
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G V+ +D+ ++ P + D R + A++M Q +P V+LSDM P
Sbjct: 76 GIVVALDLLAIESLPGVVILQGDFRDEAVLAELM-----QALGEAP----LDVVLSDMAP 126
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D + LG ALD A + VL
Sbjct: 127 NISGIAAVDQPRAALLGELALDCA--------------------------------RQVL 154
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ GG L++K+ + E + + LFR + +P A+R +SRE YL+ +G +
Sbjct: 155 KPGGALVVKMFQGEGFDALLGDMRGLFRSVAVRKPAASRANSRECYLVAKGFR 207
>E8RD49_DESPD (tr|E8RD49) Ribosomal RNA large subunit methyltransferase E
OS=Desulfobulbus propionicus (strain ATCC 33891 / DSM
2032 / 1pr3) GN=rlmE PE=3 SV=1
Length = 200
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+Y+K+A++ Y ARS +KL + Q +K G VLDLGC PGSW + + G +
Sbjct: 6 DYYFKKAKKDNYPARSVYKLEEAQLKYKFLKGGQRVLDLGCHPGSW---SLYTAGIVGEK 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+ D+++ ++ + +H + DV S+ + L GF V+LSDM P +G
Sbjct: 63 GTVVAADLQRTEILTQKPHAEIHWLCYDV--FSEEFVDYLKQHWPGFHVVLSDMAPRTTG 120
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D S+ L R L+L+V L G
Sbjct: 121 SQYADHQQSLLLARRVLELSV--------------------------------LFLHENG 148
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L K+ + ED Q CKPLF ++PK++R SRE++++ +G +
Sbjct: 149 TLYCKVFQGEDFPAFLQECKPLFATVKVMKPKSSRLESREVFVLGRGFR 197
>D2RI97_ARCPA (tr|D2RI97) Ribosomal RNA large subunit methyltransferase E
OS=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 /
NBRC 100127 / Av18) GN=rlmE PE=3 SV=1
Length = 202
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 45/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+YY +A++LGY +R++FKL+Q+ + +IK G VLDLG +PG W QVA +
Sbjct: 6 DYYYWQAKKLGYRSRASFKLIQMNRTFKLIKEGDWVLDLGASPGGWSQVAVE-------- 57
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
LG V V + P+ VH I D+ + L + ++ + V+LSD P +SG
Sbjct: 58 ---LGAKVVAVDINPMEPIEGVHFIRGDIT--REETLEEIKSVRRYYDVVLSDASPKISG 112
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
T D LS++L A +A + VL+ GG
Sbjct: 113 KWTIDHLLSIDLARSAFKIA--------------------------------REVLKDGG 140
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
N ++K+ + E+ + + K FR + PKA+R S EIY + +G K
Sbjct: 141 NFVVKVFQGEEIQNLFNEFKRFFRFKKFHSPKASRKQSAEIYFVGKGFK 189
>D3RZF4_FERPA (tr|D3RZF4) Ribosomal RNA large subunit methyltransferase E
OS=Ferroglobus placidus (strain DSM 10642 / AEDII12DO)
GN=rlmE PE=3 SV=1
Length = 197
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+YY +A++ GY +R+A+KL QI IIK G VLDLG +PG W QVA +
Sbjct: 6 DYYYWKAKKEGYRSRAAYKLKQINAKFEIIKKGYHVLDLGASPGGWSQVAVE-------- 57
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
LG DV V + P+ V I D+ +K ++R + K F V+L D P ++
Sbjct: 58 ---LGADVVAVDLNPMKPIEGVVFIKGDITKEETKEEIRKIRDK---FDVVLCDASPKIT 111
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D LS+EL A D+A K L+ G
Sbjct: 112 GKWDLDHFLSMELAKAAFDIA--------------------------------KEFLKPG 139
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GN ++KL + + +E+ + K FR P A+R S EIY I +G
Sbjct: 140 GNFVVKLFQGAELEEVVREFKKYFRFKKLHAPPASRKRSAEIYFIGKGF 188
>L0RF48_9DELT (tr|L0RF48) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio hydrothermalis AM13 = DSM 14728 GN=rlmE
PE=3 SV=1
Length = 199
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 43/230 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ Y ARS +KL ++ K I+ G +V+DLG APGSW A + +G
Sbjct: 6 DHYFKKAKKDNYPARSVYKLQELDKRFKILAKGQNVMDLGAAPGSWTLFAAKKVG---DE 62
Query: 68 GSVLGIDVK--KVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G VLG+D++ + PP + ADV S L A+ Q + +I+SDM P
Sbjct: 63 GRVLGVDIQSTDTEFPP-----NATFLQADVFVDSPELLAAMD-MQLPYDLIISDMAPKT 116
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV D S+EL RA D+ PS L+
Sbjct: 117 SGVKFADQVNSLELCERARDIL--------------------------PSR------LKK 144
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GGN ++K+ E D + + + +F K +PK++R S+EI+++ G
Sbjct: 145 GGNFVVKIFEGPDVRGYTDSLRKMFSKVKNFKPKSSRQESKEIFIVGLGF 194
>E7QN38_9EURY (tr|E7QN38) Ribosomal RNA large subunit methyltransferase E
OS=Haladaptatus paucihalophilus DX253 GN=rlmE PE=3 SV=1
Length = 254
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 42/226 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY ++++ GY +R+A+KL Q+ + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DHYYNKSKQQGYRSRAAYKLKQLDESAHLLHEGETVVDLGAAPGGWLQVAAEEVGDT--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D++++K D V TI D MT + Q + V+LSDM P+++G
Sbjct: 62 GTVIGVDLQRIK----DIDG-VETIRGD-MTEEETQEEVIDVAGSA-DVVLSDMAPNMTG 114
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A SV L +A + A+ +L GG
Sbjct: 115 EYSLDHARSVYLARQAFETAL--------------------------------ELLDSGG 142
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+ ++K+ + D ++ + +P F + P A+R S E+YL+ +
Sbjct: 143 DFVVKVFQGPDLDDLREDMEPEFEYVRTMSPDASRDESSEVYLVAR 188
>M0DA32_9EURY (tr|M0DA32) Ribosomal RNA large subunit methyltransferase E
OS=Halosarcina pallida JCM 14848 GN=rrmJ PE=3 SV=1
Length = 257
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 42/228 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY RSA+KL Q+ + + + G++V+DLG APG WLQVA +++G
Sbjct: 5 DHYYNKAKQEGYRTRSAYKLKQLDEETGLFGPGNTVVDLGAAPGGWLQVAAEAVGDQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDS-RVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSV 125
G+V+G+D ++++ DS V TI D+ +K +LR ++G V++SDM P++
Sbjct: 62 GAVVGVDFQRIR----DLDSGNVETIKGDMTEEATKERLRE-RIGEEGADVVISDMAPNM 116
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+G + D A S+ L +A ++A+ +L
Sbjct: 117 TGEYSLDHARSIHLARQAFEVAL--------------------------------ELLPA 144
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GG+ +K+ + +D + + F+ +RP A+R S E YL+ +
Sbjct: 145 GGDFAVKVFDGQDLADFRADVEKEFQYVRSVRPDASRDESSEQYLVGK 192
>L9ZUZ6_9EURY (tr|L9ZUZ6) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba hulunbeirensis JCM 10989 GN=rrmJ PE=3 SV=1
Length = 272
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 52/241 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDQLENVISGGDTVVDLGAAPGGWLEVAAEAVGPQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS------------ 115
G V+G+D+++++ H + T+ D MT + + R + S
Sbjct: 62 GQVIGVDLQRIRDFDDH--DTIETLRGD-MTEERTRERVIEAAGGDDSAQTGTATGTGGP 118
Query: 116 --VILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDD 173
V++SDM P++SG + D A S+ L +A + A+
Sbjct: 119 VDVVISDMAPNMSGEYSLDQARSLHLARQAFETAL------------------------- 153
Query: 174 PSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L G+ I+K+ E D + + F+ PKA+R S EIY I +
Sbjct: 154 -------ELLDTDGDFIVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEIYFIGK 206
Query: 234 G 234
G
Sbjct: 207 G 207
>I5AZJ9_9DELT (tr|I5AZJ9) Ribosomal RNA large subunit methyltransferase E
OS=Desulfobacter postgatei 2ac9 GN=rlmE PE=3 SV=1
Length = 208
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D ++A+ +GY ARS FKL IQ IIK G VLDLGC+PGSW A + +G
Sbjct: 19 DHLTQKAKSMGYPARSVFKLEDIQNKFQIIKKGDIVLDLGCSPGSWTLYAAKLVG---DQ 75
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V GID+K V+ + + TI D+ LS + P F+ ++SDM P+ +G
Sbjct: 76 GRVFGIDLKAVE---TNLPANALTIQDDI--LSPEHPAFIEPHTGKFNAVISDMAPATTG 130
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
DA S+EL ALD A+ L G
Sbjct: 131 RKDVDAIRSLELCRMALDTALKN--------------------------------LAFQG 158
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
N + K+ + D K Q K F++ +P++ R S+EIY+I +
Sbjct: 159 NFVCKIFQGNDFKTFEQEVKAAFKECRVFKPESCRKQSKEIYIIAKA 205
>M0GNW7_9EURY (tr|M0GNW7) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax prahovense DSM 18310 GN=rrmJ PE=3 SV=1
Length = 257
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA +++G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+L +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDLAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>R4W7M8_9EURY (tr|R4W7M8) 23S rRNA methyltransferase J OS=Salinarchaeum sp.
Harcht-Bsk1 GN=rrmJ PE=4 SV=1
Length = 270
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 48/238 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A+ GY ARSAFKL Q+ + + + G+ V+DLG APG WLQVA + +GP
Sbjct: 5 DEYYNRAKVEGYRARSAFKLRQLDETAGLFGPGNVVVDLGAAPGGWLQVAAERVGP---D 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTL-SKHQLRALSPKQKG-----------FS 115
G+V+G+D +++ + RV + DV ++ ++R ++ + G
Sbjct: 62 GAVIGVDRQRID-DLEDPEPRVELLRGDVTEADTRERIREIAAEVAGADPSADTATGAVD 120
Query: 116 VILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPS 175
V+LSDM P+VSG D A SV L +A + A
Sbjct: 121 VVLSDMAPNVSGEYELDHARSVHLARQAFETA---------------------------- 152
Query: 176 GSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
K VL GG+ + K+ + +D + F + + P ATR SS E+Y++ +
Sbjct: 153 ----KSVLAPGGDFVAKVFQGQDLEAFKADVDEAFDYARTVVPDATRDSSSEVYVVGK 206
>D3SVL0_NATMM (tr|D3SVL0) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba magadii (strain ATCC 43099 / DSM 3394 /
NCIMB 2190 / MS3) GN=rrmJ PE=3 SV=1
Length = 273
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 53/242 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDQLENVISGGDTVVDLGAAPGGWLEVAAEAVGPQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLR-----------ALSPKQKG--- 113
G V+G+D+++++ H + T+ D MT + + R A + G
Sbjct: 62 GQVIGVDLQRIRDFDDH--DTIETLRGD-MTEERTRERVIEAAGGDVESAETATDAGTGG 118
Query: 114 -FSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVD 172
V++SDM P++SG + D A S+ L +A + A+
Sbjct: 119 PVDVVISDMAPNMSGEYSLDQARSLHLARQAFETAL------------------------ 154
Query: 173 DPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
+L G+ I+K+ E D + + F+ PKA+R S EIY I
Sbjct: 155 --------ELLATDGDFIVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEIYFIG 206
Query: 233 QG 234
+G
Sbjct: 207 KG 208
>H6Q585_WIGGL (tr|H6Q585) Ribosomal RNA large subunit methyltransferase E
OS=Wigglesworthia glossinidia endosymbiont of Glossina
morsitans morsitans (Yale colony) GN=rrmJ PE=3 SV=1
Length = 203
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 42/229 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + KE++R GY +R+ FKL ++QK +NII SG +VLDLG +PG W Q A Q + L H
Sbjct: 16 DKFVKESKRFGYRSRAWFKLDEMQKANNIITSGMTVLDLGSSPGGWSQYASQKVNNLGH- 74
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
V+ D+K P+ S+V I D K L+ + + VIL D+ P+++G
Sbjct: 75 --VISCDIK-----PMLEVSKVSFILGD--AFKKDVLKKICKIKNKVDVILCDIAPNITG 125
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+T D + + +AL+L K +L G
Sbjct: 126 ITEIDHPKCISINYKALNLC--------------------------------KYILLKNG 153
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
IIK + K K LF+K+ +P A+R +S+EIY+I G K
Sbjct: 154 KFIIKSFNGSEFKRYYTAIKKLFKKTKIFKPVASRLNSQEIYIIAIGYK 202
>E4TJU0_CALNY (tr|E4TJU0) Ribosomal RNA large subunit methyltransferase E
OS=Calditerrivibrio nitroreducens (strain DSM 19672 /
NBRC 101217 / Yu37-1) GN=rlmE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +YK+A+ GY +R+++KLL++ + + + +VLD+G APG W QVA Q LG
Sbjct: 6 DSFYKKAKLEGYRSRASYKLLELNQKYKLFRKNDAVLDVGAAPGGWSQVALQLLG---EK 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ +D+ + + P++ D R H I D+ ++ L ++ F +++SD+ P+ +G
Sbjct: 63 GIVVAVDI--LDINPLN-DKRFHFIKGDIR--DENTLSEITKYASSFDIVISDIAPNTTG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D S+ L ++ + L+ G
Sbjct: 118 QKFVDHQNSINLIKTVMNFIM--------------------------------KTLKKNG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ KL + E+ + + + K LF +RP ATR +S EIY+IC+G K
Sbjct: 146 IFLFKLFDGEERESLVKDLKELFEDIKIIRPDATRKNSFEIYIICKGYK 194
>M0FZT1_9EURY (tr|M0FZT1) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax sp. ATCC BAA-644 GN=rrmJ PE=3 SV=1
Length = 259
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA +++G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0FV29_9EURY (tr|M0FV29) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax sp. ATCC BAA-645 GN=rrmJ PE=3 SV=1
Length = 259
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA +++G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0FH68_9EURY (tr|M0FH68) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax sp. ATCC BAA-646 GN=rrmJ PE=3 SV=1
Length = 259
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA +++G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0M844_9EURY (tr|M0M844) Ribosomal RNA large subunit methyltransferase E
OS=Halococcus hamelinensis 100A6 GN=rrmJ PE=3 SV=1
Length = 251
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 45/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +RSA+KL Q+ + +++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDETADLFDDGDTVIDLGAAPGGWLQVAAERVGT---- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS-VILSDMCPSVS 126
G V+G+D +++ D V T+ D L+ ++A ++ G + V+LSDM P+++
Sbjct: 61 GRVVGVDRQRID----SLDG-VETVRGD---LTDEDVQAYLAERVGEADVVLSDMAPNMT 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +A D+A+ VL G
Sbjct: 113 GEYDLDHARSVYLARQAFDVAL--------------------------------DVLAPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ + K+ + D + F +RP A+R S E+YL+ +G
Sbjct: 141 GDFVAKVFDGRDLDALEADIDTEFEYVQTVRPDASRDESSELYLVGKG 188
>M0HHF1_9EURY (tr|M0HHF1) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax gibbonsii ATCC 33959 GN=rrmJ PE=3 SV=1
Length = 257
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA +++G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>G7WPQ5_METH6 (tr|G7WPQ5) Ribosomal RNA large subunit methyltransferase E
OS=Methanosaeta harundinacea (strain 6Ac) GN=rlmE PE=3
SV=1
Length = 258
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 47/230 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D++Y++A+ GY ARSAFKL QI + +I+ G +VLDLG APG WLQVA + G
Sbjct: 7 DYFYRKAKAEGYRARSAFKLQQINQRFRLIRRGDAVLDLGAAPGGWLQVAKEI-----SG 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQL--RALSPKQKGFSVILSDMCPSV 125
G V+G+D+ + + P+ V TI AD+ +L AL K V++ D P++
Sbjct: 62 GRVVGVDL--LAIEPIDG---VTTIKADITAPETLELIVEALGGKA---DVVICDAAPNL 113
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG T D A S++L AL +A + VL+
Sbjct: 114 SGNWTLDHARSIDLSRSALRVA--------------------------------ESVLKP 141
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GGN ++K+ + + + + FR++ P A+R S E+Y++ QG
Sbjct: 142 GGNFLVKVFQGDTFLDYLSEVRVRFRRAQSHSPAASRKESAEMYVVGQGF 191
>M4YQ38_9EURY (tr|M4YQ38) 23S rRNA Um-2552 2'-O-methyltransferase
OS=Thermoplasmatales archaeon BRNA1 GN=TALC_01539 PE=4
SV=1
Length = 222
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 41/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
++YY+ A+ + Y +R++FKLLQ+ + +I + G SV+DLG PG W QVA +G
Sbjct: 7 EYYYRLAKEMDYRSRASFKLLQLDEKFHIFEEGDSVVDLGACPGGWSQVAYDIVG---EK 63
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++ +H V I D+ T +R L V+LSDM P+++G
Sbjct: 64 GKVIGVDLRY-----IHPLEGVQFIIGDI-TDDNTMIRLLDMVGGKVDVVLSDMAPNIAG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL M A+D+ D+ +L+ GG
Sbjct: 118 HYSTDHARSIELCMYAVDVC-------------------------------DR-ILKKGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
+ +K+ + +++ + K F PKA+RP+S E+Y++C+G
Sbjct: 146 KMAMKVFMGDLFQDLERELKKRFDSVIVTSPKASRPTSSEVYVVCRGF 193
>M0N598_9EURY (tr|M0N598) Ribosomal RNA large subunit methyltransferase E
OS=Halococcus thailandensis JCM 13552 GN=rrmJ PE=3 SV=1
Length = 251
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 45/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +RSA+KL Q+ + +++ S+V+DLG APG WLQVA +
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDETADLFADRSTVIDLGAAPGGWLQVAAERAPE---- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRA-LSPKQKGFSVILSDMCPSVS 126
G V+G+D ++++ D V T D L+ +RA L V+LSDM P++S
Sbjct: 61 GRVVGVDRQRIEA----IDG-VETRRGD---LTDEDVRAELKADVGEADVVLSDMAPNMS 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD+A + VL G
Sbjct: 113 GEYNLDHARSVHLARQALDVA--------------------------------REVLTPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+L++K+ + D ++ + F +RP A+R S E+YL+ +G
Sbjct: 141 GDLVVKVFDGRDLDDLEADIEEAFEYVRTVRPDASRDESSELYLVGKG 188
>M0J9T5_9EURY (tr|M0J9T5) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax denitrificans ATCC 35960 GN=rrmJ PE=3 SV=1
Length = 259
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0I5L2_9EURY (tr|M0I5L2) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax alexandrinus JCM 10717 GN=rrmJ PE=3 SV=1
Length = 259
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0GF30_HALL2 (tr|M0GF30) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax lucentense DSM 14919 GN=rrmJ PE=3 SV=1
Length = 259
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>L5NUU3_9EURY (tr|L5NUU3) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax sp. BAB2207 GN=rrmJ PE=3 SV=1
Length = 259
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0B7G4_9EURY (tr|M0B7G4) Ribosomal RNA large subunit methyltransferase E
OS=Natrialba chahannaoensis JCM 10990 GN=rrmJ PE=3 SV=1
Length = 273
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 53/242 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + N+I G +V+DLG APG WL+VA +++GP
Sbjct: 5 DHYYNKAKQEGYRSRAAYKLKQLDQLENVISGGDTVVDLGAAPGGWLEVAAEAVGPQ--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSP---------------KQK 112
G V+G+D+++++ H + T+ D MT + + R +
Sbjct: 62 GQVIGVDLQRIRDFDDH--DTIETLRGD-MTEERTRERVIEAAGGDAESAETGTATGTGG 118
Query: 113 GFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVD 172
V++SDM P++SG + D A S+ L +A + A+
Sbjct: 119 PVDVVISDMAPNMSGEYSLDQARSLHLARQAFETAL------------------------ 154
Query: 173 DPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
+L G+ I+K+ E D + + F+ PKA+R S E+Y I
Sbjct: 155 --------ELLATDGDFIVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEVYFIG 206
Query: 233 QG 234
+G
Sbjct: 207 KG 208
>G2MN58_9ARCH (tr|G2MN58) Ribosomal RNA large subunit methyltransferase E
OS=halophilic archaeon DL31 GN=rlmE PE=3 SV=1
Length = 260
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G+ D YY A++ GY ARSA+KL Q+ + + + + G +V+DLG APG WLQVA + +GP
Sbjct: 2 GSKDDYYNRAKQQGYRARSAYKLKQLDEEATLFEEGDTVVDLGAAPGGWLQVAAEKVGPQ 61
Query: 65 QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLR---ALSPKQKGFSVILSD 120
G V+G+D + + H +V T+ D+ ++ +LR + ++ V++SD
Sbjct: 62 ---GRVVGVDFQSIDDLEPH---QVKTMRGDMTEEQTRDRLRRELGVEDDERVVDVVISD 115
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
M P+++G D A SV L A + A+
Sbjct: 116 MAPNMTGEYELDHARSVHLARTAFETAL-------------------------------- 143
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
L+ + ++K+ + D E + F+ + P A+R +S E+YL+ +G
Sbjct: 144 KYLKPDSDFVVKVFQGRDLDEFRSDVEAEFQYVRTIAPPASRDASSEVYLVGKG 197
>E4NRH2_HALBP (tr|E4NRH2) Ribosomal RNA large subunit methyltransferase E
OS=Halogeometricum borinquense (strain ATCC 700274 / DSM
11551 / JCM 10706 / PR3) GN=rrmJ PE=3 SV=1
Length = 256
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY RSA+KL Q+ + + + G++V+DLG APG WLQVA + + H
Sbjct: 4 DHYYNKAKQEGYRTRSAYKLKQLDEETGLFGPGNTVVDLGAAPGGWLQVAAEEVS--DH- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+G+D+++++ + D+ V TI D+ +K LR ++G V++SDM P+++
Sbjct: 61 GTVVGVDLQRIR--DIDADN-VETIRGDMTDEETKESLRE-RIGEEGADVVISDMAPNMT 116
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A S+ L +A ++A+ +L G
Sbjct: 117 GEYSLDHARSIHLARQAFEVAL--------------------------------DLLPAG 144
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + +D + + F+ +RP A+R S E YL+ +
Sbjct: 145 GDFAVKVFDGQDLADFRADVEEEFQYVRSIRPDASRDESSEQYLVGK 191
>M0I0S7_9EURY (tr|M0I0S7) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax sulfurifontis ATCC BAA-897 GN=rrmJ PE=3
SV=1
Length = 259
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQVA + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEKVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>M0DSJ1_9EURY (tr|M0DSJ1) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum saccharovorum DSM 1137 GN=rrmJ PE=3 SV=1
Length = 274
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 40/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY +R+++KL QI + S++ + G +V+DLG APG WLQVA + +G
Sbjct: 5 DEYYNRSKQQGYRSRASYKLKQIDEESDLFERGDTVVDLGAAPGGWLQVAAEEVGGSG-- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
+V+G+D++++ H V TI D+ ++H LR + ++G ++SDM P+++
Sbjct: 63 -TVVGVDLQRIDDLEEHD---VETIRGDMTEERTRHYLRE-AVGERGADAVISDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +A D+A + +L G
Sbjct: 118 GEYALDHARSVHLARQAFDVA--------------------------------EELLAPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ ++K+ + ED + + F+ + P A+R SS E+YL+ +GL
Sbjct: 146 GDFVVKVFQGEDLDAFREDVREEFQYLRTVSPPASRDSSSEVYLVARGLN 195
>E1YIH9_9DELT (tr|E1YIH9) Ribosomal RNA large subunit methyltransferase E
OS=uncultured Desulfobacterium sp. GN=rlmE PE=3 SV=1
Length = 208
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 45/236 (19%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
A+ D Y + A++ Y ARS +KL ++Q +IK G VLDLGC PGSW A +G
Sbjct: 16 ANRWEDHYSRLAKKENYPARSVYKLQELQSRYKLIKKGGRVLDLGCYPGSWTIYASDLVG 75
Query: 63 PLQHGGSVLGIDVKK--VKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
G+V+GID+KK +K+P S D++ + L ++ K F +++SD
Sbjct: 76 ---QKGTVVGIDLKKLDIKIP-----SNALVYQCDILNIDNSMLLSIGNK---FDIVISD 124
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
M P+ +G + DA S +L + ALD+A
Sbjct: 125 MAPATTGNKSVDAVRSYDLCLAALDVA--------------------------------N 152
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
VL G+ + K+ + ED + ++ K F +P+++R S+EIY+I G K
Sbjct: 153 NVLLHNGSFLCKIFQGEDFNKFLEMVKAAFNTYKIFKPQSSRKLSKEIYIIGLGKK 208
>H1L056_9EURY (tr|H1L056) Ribosomal RNA large subunit methyltransferase E
OS=Methanotorris formicicus Mc-S-70 GN=rlmE PE=3 SV=1
Length = 247
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 44/230 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYY A++ Y +R+ FKL Q+ + +K G V+DLGCAPG WLQ A + +G
Sbjct: 17 DFYYNLAKKQKYRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVG---EK 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSPKQKGFSVILSDMCPS 124
G V+G+D++ VK P+ D+ V TI D+ T+ K + L P + +V++SD P+
Sbjct: 74 GFVVGVDLQSVK--PLPYDN-VKTIKGDMTKEETIQKIR-EILYPAKP--TVVISDASPN 127
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV D A S+EL AL +A +L+
Sbjct: 128 ISGVWDVDHARSIELTTIALKIAT--------------------------------KLLK 155
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GGN +K+ + + + + + F K +P+A+R S E+Y++ +G
Sbjct: 156 EGGNFAVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASRKESAEVYVVGKG 205
>K0IMJ8_NITGG (tr|K0IMJ8) Ribosomal RNA large subunit methyltransferase E
OS=Nitrososphaera gargensis (strain Ga9.2) GN=rlmE PE=3
SV=1
Length = 198
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 107/229 (46%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + A+ GY ARSA+KLLQ+ I+K GS V+DLGCAPG WLQVA + +G
Sbjct: 9 DQYRRLAKDQGYRARSAYKLLQLNSSYRILKKGSKVVDLGCAPGGWLQVATKEVG---QA 65
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+GID+K V+ PV + + D L K + + K V+LSD+ P+VSG
Sbjct: 66 GKVVGIDLKPVE--PVLGATVLEGSIEDPAMLEK--IAGILDGGKA-DVVLSDLAPNVSG 120
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V D A + L AL A + +LR GG
Sbjct: 121 VWDVDHARQISLSTIALGFA--------------------------------RQILRAGG 148
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ + K+ E + E K F + +P A+R S E+Y++C K
Sbjct: 149 SAVFKVFEGDMLNEFRAELKKSFGRVFLSKPSASRQESSELYIVCLDFK 197
>J1APN2_9EURY (tr|J1APN2) Ribosomal RNA large subunit methyltransferase E
OS=Methanofollis liminatans DSM 4140 GN=rlmE PE=3 SV=1
Length = 200
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 45/237 (18%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
M + D Y +A+R G+ AR+A+KLL+IQ +I+ +V+DLG APGSWLQV
Sbjct: 1 MTSQWTRDKYSNKAKREGFRARAAYKLLEIQNRHPVIREDDTVVDLGAAPGSWLQV---- 56
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILS 119
L L G+++G+D+ P+ V T+ D T + Q++ L+ S++
Sbjct: 57 LRTLTK-GTIIGVDLN-----PIASLEGVITVVGDFTTPEVQEQVKELA--GGAISIVTC 108
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
D P +SG T+ D A ++ LG AL+ AV
Sbjct: 109 DASPKLSGATSYDQARAIGLGEEALNFAV------------------------------- 137
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
VL+ GGN I K + ED E+ K F RP ++R SRE Y+I + +
Sbjct: 138 -SVLKDGGNFICKTFQGEDFPELFADVKKHFLSVKTFRPVSSRRGSRETYIIAKNFR 193
>M0NBC1_9EURY (tr|M0NBC1) Ribosomal RNA large subunit methyltransferase E
OS=Halococcus salifodinae DSM 8989 GN=rrmJ PE=3 SV=1
Length = 251
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 45/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +RSA+KL QI +++I +V+DLG APG WLQVA + G
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQIDDTADLIAPSDTVIDLGAAPGGWLQVAAER----ADG 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG-FSVILSDMCPSVS 126
G V+G+D ++++ D V T+ D L++ +A ++ G ++LSDM P+++
Sbjct: 61 GRVVGVDRQRIE----SIDG-VETVRGD---LTEESTQAEIAERVGKADLVLSDMAPNMT 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A S+ L +ALD+A + +L G
Sbjct: 113 GEYELDHARSIHLARQALDVA--------------------------------RTILTPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+L++K + D ++ + F +RP A+R S E++L+ +G
Sbjct: 141 GDLVVKAFDGRDLDDLEADIEDEFEYVRTVRPDASRDESSELFLVGKG 188
>M0FG20_9EURY (tr|M0FG20) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum hochstenium ATCC 700873 GN=rrmJ PE=3 SV=1
Length = 260
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL QI + +++ + G +V+DLG APG WLQVA +++G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIDEEADLFERGDTVVDLGAAPGGWLQVAAEAVGEGG-- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
+V+G+D++++ H V TI D+ ++H LR + + G V++SDM P+++
Sbjct: 63 -TVVGVDLQRIDDLDDHD---VETIRGDMTEERTRHYLRE-AVDEGGADVVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G T D A SV L +A D A +L G
Sbjct: 118 GEYTLDHARSVHLARQAFDTA--------------------------------DELLASG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G+ ++K+ + +D F+ + P A+R SS E+YL+ +G
Sbjct: 146 GDFVVKVFQGDDLDAFRDDVSEAFQYVRTVSPPASRDSSSEVYLVGKGY 194
>L9K9K5_9DELT (tr|L9K9K5) Ribosomal RNA large subunit methyltransferase E
OS=Cystobacter fuscus DSM 2262 GN=rlmE PE=3 SV=1
Length = 205
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 41/225 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ G ARSAFK+ +I K +K G++VLDLG APG +LQ+ ++GP G
Sbjct: 9 DHYFKKAKQEGLRARSAFKVDEILKRYPFLKKGATVLDLGAAPGGFLQILADTVGP---G 65
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+ V + P V T DV+ +LR + F ++SDM P S
Sbjct: 66 GRVIGVDI--VPIRP-FTQPFVKTAVLDVLADDFDAKLREMY--DGPFDAVISDMAPKTS 120
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ T D A S+ L +AL+++V +G R G
Sbjct: 121 GIRTTDEARSLRLARKALEVSV------------------------------TRG--RPG 148
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
+ KL + +E Q + F + +RP+ATR +S E+Y+I
Sbjct: 149 SAFVAKLFMGGEFEEFRQEVRAHFEEVKLVRPEATRGASMEVYVI 193
>J3EXE4_9EURY (tr|J3EXE4) Ribosomal RNA large subunit methyltransferase E
OS=Halogranum salarium B-1 GN=rlmE PE=3 SV=1
Length = 258
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + S+++ G +DLG APG WLQVA + +G +H
Sbjct: 5 DEYYNRAKQQGYRARSAYKLKQLNESSSLLSPGDVAVDLGAAPGGWLQVASEEVG--EH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSR-VHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D++++K ++R V TI D+ + + G V+LSDM P+++
Sbjct: 62 GKVIGVDLQRIK----ELEARNVTTIRGDMTEEDTKEQLFDAIGDDGADVVLSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +A ++A+ +L G
Sbjct: 118 GEYNLDHARSVYLARQAFEVAL--------------------------------ELLDSG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
G+L++K+ + D ++ + F+ P A+R S E+YLI
Sbjct: 146 GDLVVKVFDGPDLPDLRSDMEKEFQYVRATHPDASRQESSELYLI 190
>A4A9Y2_9GAMM (tr|A4A9Y2) Ribosomal RNA large subunit methyltransferase E
OS=Congregibacter litoralis KT71 GN=rlmE PE=3 SV=1
Length = 206
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y ++AQR GY +R+ +KLL++Q+ NII+ G +VLDLG APG W QVA + +G
Sbjct: 18 DPYVQQAQRDGYRSRACYKLLELQERDNIIRPGMTVLDLGSAPGGWSQVAAELVG---KR 74
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ D+ + + P+ V+ + D + K +++SDM P++SG
Sbjct: 75 GQVIASDI--LPMDPIDG---VNFVQGDFTEDQVFEQILAEMGDKSADLVISDMAPNMSG 129
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V+ D S+ L ALD+A VL GG
Sbjct: 130 VSAVDQPKSIYLVELALDMAT--------------------------------RVLVPGG 157
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
I K+ + E E+ + + F K +P A+RP SRE+YL+ +G +
Sbjct: 158 AFITKVFQGEGFDELFRATREQFDKVLTRKPSASRPRSREVYLVARGRR 206
>K0NFN1_DESTT (tr|K0NFN1) Ribosomal RNA large subunit methyltransferase E
OS=Desulfobacula toluolica (strain DSM 7467 / Tol2)
GN=rrmJ PE=3 SV=1
Length = 217
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 102/225 (45%), Gaps = 45/225 (20%)
Query: 14 AQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSVLGI 73
A+ Y ARS +KL +IQ ++K VLDLGCAPGSWL A + +G + G V GI
Sbjct: 36 AKAENYPARSIYKLEEIQNKFKVMKKNDQVLDLGCAPGSWLLYAAKQVG---NKGLVKGI 92
Query: 74 DVK--KVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTTK 131
D+K ++K+P V I +++ A K +GF VILSDM P+ +G
Sbjct: 93 DLKPIEIKLP-----DNVVAIKDNILNQDNA---AFLDKNRGFDVILSDMAPATTGRKDV 144
Query: 132 DAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLII 191
DA S EL AL +A K L GN +
Sbjct: 145 DALRSFELCDMALTIA--------------------------------KNFLVQNGNFVC 172
Query: 192 KLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
K+ + D + + K F++ +P + R S+EIY+I +G K
Sbjct: 173 KIFQGNDFNDFQKRVKSKFKECKTFKPDSCRKQSKEIYIIAKGKK 217
>D4GZC4_HALVD (tr|D4GZC4) Ribosomal RNA large subunit methyltransferase E
OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 /
JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
GN=ftsJ PE=3 SV=1
Length = 259
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY ARSA+KL Q+ + + G++V+DLG APG WLQV + +G H
Sbjct: 5 DHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVVSEEVG--DH- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+++++ + D+ V TI D+ +K +L A+ ++G ++SDM P+++
Sbjct: 62 GKVVGVDLQRIR--GIDRDN-VQTIRGDMTEDETKEELTAVI-GERGADAVVSDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A ++A + +L G
Sbjct: 118 GEYSLDHARSVYLARQAFEVA--------------------------------QELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
G+ +K+ + D ++ + F+ +RP A+R SS E YL+ +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGK 192
>D5VAK5_MORCR (tr|D5VAK5) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis (strain RH4) GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1XE17_MORCA (tr|F1XE17) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis O35E GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1XA93_MORCA (tr|F1XA93) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis CO72 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1X5M6_MORCA (tr|F1X5M6) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis BC8 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1WYN4_MORCA (tr|F1WYN4) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis BC7 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1WRJ6_MORCA (tr|F1WRJ6) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis BC1 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1WMN2_MORCA (tr|F1WMN2) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis 12P80B1 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1WHY9_MORCA (tr|F1WHY9) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis 46P47B1 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1WBF9_MORCA (tr|F1WBF9) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis 103P14B1 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1W869_MORCA (tr|F1W869) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis 7169 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>F1VPC7_MORCA (tr|F1VPC7) Ribosomal RNA large subunit methyltransferase E
OS=Moraxella catarrhalis 101P30B1 GN=rlmE PE=3 SV=1
Length = 210
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++AQ+ GY AR+A+KLL+I + + +IK G +V+DLG APGSW QVA Q +G
Sbjct: 24 DFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVVDLGSAPGSWSQVAGQLVG---DA 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G+++ D+ + V + D R + +M + V+LSDM P
Sbjct: 81 GTLIASDILPMDTLENVIFIQGDFREEAVFNQIMN---------EVGGRAVDVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG+ D + L A+D A+ VL
Sbjct: 132 NTSGMAAVDQPRMMYLCELAVDFAL--------------------------------KVL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
VGG LI+K+ + E S+E+ + F K ++P A+RP S+E++ +
Sbjct: 160 PVGGALIMKVFQGEGSQELRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>A6G3Z4_9DELT (tr|A6G3Z4) Ribosomal RNA large subunit methyltransferase E
OS=Plesiocystis pacifica SIR-1 GN=rlmE PE=3 SV=1
Length = 209
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 41/228 (17%)
Query: 11 YKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSV 70
Y A+R + R+ +KL +I K +IK G+ VLDLGC PGSWLQ A + G ++
Sbjct: 12 YLRAKRENFAGRAIYKLEEIDKRFRLIKPGARVLDLGCWPGSWLQYAVKRAGT---DATL 68
Query: 71 LGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSGVTT 130
+G+D+K V++ S V T DV +K +L + + F V+LSDM P+ +G
Sbjct: 69 VGVDLKAVELA---LPSNVKTFVGDV---NKLKLDKMVERFGRFDVVLSDMAPNTTGNKD 122
Query: 131 KDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLI 190
D +S +L +RALD+A G R+GG+
Sbjct: 123 FDIPVSEDLFLRALDIATGCS--------------------------------RIGGHFC 150
Query: 191 IKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPD 238
K+ + E+ + + ++++ R TR SRE Y+I +GLK +
Sbjct: 151 AKVFQGARFHELIREVERRYQQAKPYRSAHTRKQSREQYIIGRGLKAN 198
>M4V980_9DELT (tr|M4V980) Cell division protein FtsJ OS=Bdellovibrio exovorus JSS
GN=A11Q_1567 PE=4 SV=1
Length = 204
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ + ARS FKL +I + ++K VLDLG +PGSW Q Q +GP
Sbjct: 7 DHYFKKAKQQNFAARSVFKLEEIDQKFKLLKPKQMVLDLGASPGSWSQYCAQKVGP---Q 63
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G +LG+D+K V S I AD+ L+ Q+ F +++SDM P+ +G
Sbjct: 64 GHILGVDLKPVTAKL----SNAVFIQADLRDLNLEQIFKEHGFPPPFDLVISDMAPNTTG 119
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S EL AL+++ K L+ G
Sbjct: 120 IRMTDQARSFELCELALNIS--------------------------------KRFLKKDG 147
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
+ I KL S+D ++ K F++ ++P +TR S+EI+L+
Sbjct: 148 HFICKLFHSDDFTDLRNQIKEDFQQFHAVKPDSTRKISKEIFLV 191
>C7LQQ5_DESBD (tr|C7LQQ5) Ribosomal RNA large subunit methyltransferase E
OS=Desulfomicrobium baculatum (strain DSM 4028 / VKM
B-1378) GN=rlmE PE=3 SV=1
Length = 204
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+Y+K+A++ Y ARS +KL ++ K +++ G VLDLG PGSW A + +G
Sbjct: 6 DYYFKKAKQDNYPARSVYKLQEMDKAHKLLRQGQKVLDLGACPGSWTLYAAERVG---AE 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMT---LSKHQLRALSPKQKGFSVILSDMCPS 124
G VLGID + +P +V + D+ L L+AL+P F V++SDM P
Sbjct: 63 GRVLGID---LNMPDTRFPEQVTFLQEDIFARTPLFLGHLQALAP----FDVVMSDMAPK 115
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+G D A S++L ++ A G + EE L
Sbjct: 116 TTGSKFTDQARSIQL----VEAAFG---------------VAEEW-------------LA 143
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDA 239
GG I K+ E D + Q K F K +PK++R S+EI+++ G P A
Sbjct: 144 SGGTFIAKVFEGPDVQPFVQSLKVRFAKVGMFKPKSSRAESKEIFILGLGFVPAA 198
>M0D370_9EURY (tr|M0D370) Ribosomal RNA large subunit methyltransferase E
OS=Halosimplex carlsbadense 2-9-1 GN=rrmJ PE=3 SV=1
Length = 261
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 41/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + + + G++V+DLG APG WLQVA + +
Sbjct: 5 DDYYNRAKQQGYRARSAYKLKQLDETAGLFGPGNTVVDLGAAPGGWLQVAAEEVSDR--- 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK----HQLRALSPKQKGFSVILSDMCP 123
G+V+G+D + ++ P+ V + D+ S + ++ V++SDM P
Sbjct: 62 GTVVGVD--RQRIDPLEDHDSVELVRGDLTEASTIDEVVERVGADTGERPVDVVISDMAP 119
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+++G D A SV L +A ++A D+ VL
Sbjct: 120 NMTGDYDLDHARSVHLARQAFEVA-------------------------------DR-VL 147
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GG+L +K+ + +D ++ + F +RP+A+R SS E+YL+ +
Sbjct: 148 DSGGDLAVKVFDGKDLDDLEADIEEQFEYVRQVRPEASRDSSSELYLVAK 197
>D5VRJ2_METIM (tr|D5VRJ2) Ribosomal RNA large subunit methyltransferase E
OS=Methanocaldococcus infernus (strain DSM 11812 / JCM
15783 / ME) GN=rlmE PE=3 SV=1
Length = 245
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 47/235 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY+ A++L Y +R+ FKLLQI + + +K +VLDLGCAPG W++ A + +G
Sbjct: 15 DPYYRLAKKLKYRSRAYFKLLQINEKFHFLKPKQAVLDLGCAPGGWMEAAKEIVGD---Q 71
Query: 68 GSVLGIDVKKVK------VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
G ++GID++KVK + P+ D + + + + R + F V++SD
Sbjct: 72 GLIVGIDLQKVKPFKDKNLIPIQGDFTKERNLKKIKEILRERGR------EKFDVVISDA 125
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
P++SG D A SVEL AL +A
Sbjct: 126 SPNISGHWAVDHARSVELVKTALQIAT--------------------------------E 153
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+LR G+ + K+ + E+ + K F K +P+A+R S EIYLI + K
Sbjct: 154 MLRKDGHFVAKVFYGDMVDELKNLAKKYFDKVYLTKPRASRKESSEIYLIAKRFK 208
>Q1NVI8_9DELT (tr|Q1NVI8) Ribosomal RNA large subunit methyltransferase E
OS=delta proteobacterium MLMS-1 GN=rlmE PE=3 SV=1
Length = 199
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 42/230 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARS +KL++ Q+ +++ G VLDLGC PG W A + +G
Sbjct: 6 DHYYHRAKKEGYPARSVYKLIEAQQKFRLLRPGDRVLDLGCQPGGWSMFAAEQVGAR--- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK-HQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+ + P + H + D+ S ++R ++P ++V+LSDM P +
Sbjct: 63 GLVVGVDLNPGPIRP-RKGAPFHFVLGDINRESVLARVREITPD---YTVLLSDMAPRTT 118
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D S+ L L LA +L G
Sbjct: 119 GNRWADQQQSLRLAREVLRLA--------------------------------GELLAAG 146
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GN K+ E ED +E+ C+ F K +PK++R SRE++++ GLK
Sbjct: 147 GNFYCKVFEGEDFQELVADCRQRFAKVKIFKPKSSRAESREVFVL--GLK 194
>C6YSA5_9GAMM (tr|C6YSA5) Ribosomal RNA large subunit methyltransferase E
OS=Francisella philomiragia subsp. philomiragia ATCC
25015 GN=rlmE PE=3 SV=1
Length = 206
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+Y +A +LGY +R++FK+L+IQ N+ K ++DLG APG W + + +G +
Sbjct: 17 DYYVLQANKLGYRSRASFKILEIQDKYNLFKQNMFIVDLGAAPGGWSEQVVKFIG---NN 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G ++ +D+ +++ P+ + V I D + ++ K ++SDM P++SG
Sbjct: 74 GKLIALDL--LEMAPI---AGVEFIQGDFSSDETYERLNQLINDKKIDCVISDMAPNLSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
T D A S+ L ALD A L G
Sbjct: 129 NKTSDQARSIYLLELALDFATTN--------------------------------LNRNG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ + K+ + + S E ++ + F K + +PK++RP SRE Y++ G K
Sbjct: 157 SFVAKVFQGQGSDEYLKLVRESFNKVTQFKPKSSRPKSREFYVVATGFK 205
>M0ESR5_9EURY (tr|M0ESR5) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum coriense DSM 10284 GN=rrmJ PE=3 SV=1
Length = 261
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL Q+ + ++++ SG +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLLASGDTVVDLGAAPGGWLQVAAEEVGEGG-- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
+V+G+D+++++ ++ V TI D+ ++H LR + ++G V+ SDM P+++
Sbjct: 63 -TVVGVDLQRIEALD---EADVETIRGDMTEERTRHYLRE-AVGERGADVVASDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +ALD A +L G
Sbjct: 118 GEYSLDHARSVHLARQALDTA--------------------------------DELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVAASFQYVRTVSPPASRDASSEVYLVAKG 193
>M0EA89_9EURY (tr|M0EA89) Ribosomal RNA large subunit methyltransferase E
OS=Halorubrum californiensis DSM 19288 GN=rrmJ PE=3 SV=1
Length = 261
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +++ GY ARSA+KL Q+ + ++++ G +V+DLG APG WLQVA + +G
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLLAPGDTVVDLGAAPGGWLQVAAEEVGEGG-- 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM-TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
+V+G+D+++++ H V TI D+ ++H LR + ++G V+ SDM P+++
Sbjct: 63 -TVVGVDLQRIEALDDHD---VETIRGDMTEERTRHYLRE-AVGERGADVVASDMAPNMT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +ALD A +L G
Sbjct: 118 GEYSLDHARSVHLARQALDTA--------------------------------DELLATG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+ ++K+ + ED F+ + P A+R +S E+YL+ +G
Sbjct: 146 GDFVVKVFQGEDLDAFRDDVSESFQYVRTVSPPASRDASSEVYLVAKG 193
>F7XPT7_METZD (tr|F7XPT7) Ribosomal RNA large subunit methyltransferase E
OS=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636
/ OCM 62 / WeN5) GN=rlmE PE=3 SV=1
Length = 265
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
A D YY A+ GY +R+++KL QI K N+IK +V+DLG APG WLQVA +
Sbjct: 2 ARNQRDRYYWLAKSDGYRSRASYKLQQINKKFNVIKRNDTVVDLGAAPGGWLQVARE--- 58
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMC 122
GG V+G+D++++K P+ V TI D+ + S + G V++ D
Sbjct: 59 --LSGGKVVGVDLRRIK--PIES---VDTIKGDITSESTVNKILDLVGEHGADVVICDAA 111
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P++SG + D A S++L A + + + +
Sbjct: 112 PNMSGNWSLDHARSIDLANSAFECS--------------------------------QKI 139
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
LR GGN ++K+ + + KE K F + P+A+R S EIY+I + +
Sbjct: 140 LRPGGNFVVKVFQGDMFKEFIDRVKSEFVHTKAYNPEASRSQSAEIYVIGKKM 192
>B6WY74_9DELT (tr|B6WY74) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio piger ATCC 29098 GN=rlmE PE=3 SV=1
Length = 220
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 49/238 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ +A+R Y ARS +KL ++ + + G VLDLG APGSW A + +G
Sbjct: 6 DHYFLKAKRENYPARSVYKLKELDAKFKLFRQGMRVLDLGAAPGSWSLGAAEKVG---QR 62
Query: 68 GSVLGIDVKKVKV--PPVHCDSRVHTIAADVMTLS---KHQLRALSPKQKGFSVILSDMC 122
G VLG D++ + PP +V + DV S + +LR + P F V++SDM
Sbjct: 63 GLVLGCDIQTTETAFPP-----QVTFMQEDVFNRSDAFEARLREMGP----FDVVMSDMA 113
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P +G D A S+EL AL++A +
Sbjct: 114 PRTTGTKFTDQARSLELACEALEVA--------------------------------RLH 141
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
L+ GG+ I+K+ D +E+ Q + F+ +PK++R S+E + + G K +A+
Sbjct: 142 LKPGGSFIVKIFMGPDIQEMLQPMRRAFKAVKSFKPKSSRAESKETFFVGMGFKAEAR 199
>K6GES9_9DELT (tr|K6GES9) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio magneticus str. Maddingley MBC34
GN=rlmE PE=3 SV=1
Length = 213
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ +A++ Y ARS +KL +I+K S ++ G+++LDLG PGSW A + +GP G
Sbjct: 6 DHYFNKAKQDNYPARSVYKLEEIEKQSRLLTPGAAILDLGACPGSWTLYAAKRVGP---G 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG-FSVILSDMCPSVS 126
G VLGID+ V + D++ A +Q G F V+LSDM P +
Sbjct: 63 GRVLGIDLNPAG---TAFPGNVTYLIGDMLEPGPDIAEAF--EQFGPFDVVLSDMAPKTT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A S+EL AL +AV L+ G
Sbjct: 118 GHKFTDQARSLELCEAALSVAVAR--------------------------------LKPG 145
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G ++K+ + DS + + F +PK++R S+EI+ + G
Sbjct: 146 GAFVVKIFQGPDSPAFQKGLRQYFSAVRVAKPKSSRAESKEIFFVATGF 194
>K2B5B6_9BACT (tr|K2B5B6) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium GN=rlmE PE=3 SV=1
Length = 213
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 39/234 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D ++ +A+ GY ARSA+KL +I + II++G +VLDLG APGS++QV + +GP
Sbjct: 16 DKFFHKAKEEGYRARSAYKLKEILERFRIIRAGFNVLDLGSAPGSFIQVISKIVGP---S 72
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G+V+GID+K+++ V T D+ L ++ Q+ F I SD+ P+ +
Sbjct: 73 GTVVGIDLKEIEPFGASEALKNVTTYVGDIFDFD--YLESILGAQR-FDAITSDLMPNTT 129
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D SV+L + AL + +R+ L+ G
Sbjct: 130 GIKFLDQDSSVDLNIAALRV------------------VRKH--------------LKPG 157
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
G+ I K+ S + + K FR ++P+A R +S+EIY+I G K + +
Sbjct: 158 GSAIFKIFNSNELRRFLSDAKRDFRDVRAMKPEAVRSTSKEIYIIGMGHKGEGR 211
>K2GZJ7_9BACT (tr|K2GZJ7) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium (gcode 4) GN=rlmE PE=3 SV=1
Length = 206
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ EA+RLGY ARSAFKLL++Q+ NIIK G SVLD+ APGS+LQV + + +
Sbjct: 15 DRYFMEAKRLGYRARSAFKLLEVQEKFNIIKPGFSVLDVWAAPGSFLQVIYKIVW---ND 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
++ ID++K++ P + I + K + + K F +I SD+ PS +G
Sbjct: 72 AKIVWIDIQKIEPLPYQ---NLTLIQESIFEYDKLKAIFEEMQLKQFDLITSDIAPSTTG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
T D SVEL + +D A L+
Sbjct: 129 QTWVDQYRSVELNLAIVDFA--------------------------------DVFLKKWW 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+L++K+ ED ++ K ++ +PKA R S E Y +C
Sbjct: 157 SLLLKVFVWEDVNDLIFPIKKKYKDLKRFKPKACRDRSFEEYFVCMN 203
>D7DSH4_METV3 (tr|D7DSH4) Ribosomal RNA large subunit methyltransferase E
OS=Methanococcus voltae (strain ATCC BAA-1334 / A3)
GN=rlmE PE=3 SV=1
Length = 298
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYY A++ Y +R+ +KL Q+ + N IK + V+DLGCAPG WLQ A + +G
Sbjct: 15 DFYYNLAKKNQYRSRATYKLFQLNEKFNFIKEDNVVIDLGCAPGGWLQSAREIVG---ED 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+GID++KVK P+ D+ V I D MT + ALS + VI+ D P+VSG
Sbjct: 72 GFVVGIDLQKVK--PLKYDNVV-AIKGD-MTKEEVLKEALSYLPRNPDVIICDASPNVSG 127
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V D S+ L AL + VL+ GG
Sbjct: 128 VWDVDHTCSLILTTMALMTST--------------------------------RVLKRGG 155
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
N ++K+ + + + + + F K +PKA+R S E+Y+I
Sbjct: 156 NFVVKVFQGDLFNKYTDLVGTYFDKVITTKPKASRGESAEVYVI 199
>M0MHN0_HALMO (tr|M0MHN0) Ribosomal RNA large subunit methyltransferase E
OS=Halococcus morrhuae DSM 1307 GN=rrmJ PE=3 SV=1
Length = 251
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 45/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +RSA+KL Q+ + +++ S+V+DLG APG WLQVA +
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDETADLFTDRSTVIDLGAAPGGWLQVAAERAPE---- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRA-LSPKQKGFSVILSDMCPSVS 126
G V+G+D ++++ D V T D L+ +RA L V+LSDM P++S
Sbjct: 61 GRVVGVDRQRIEA----IDG-VETRRGD---LTDEDVRADLKADIGEADVVLSDMAPNMS 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A SV L +ALD+A + VL G
Sbjct: 113 GEYDLDHARSVHLARQALDVA--------------------------------REVLTPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G+L +K+ + D + + F +RP A+R S E+YL+ +G
Sbjct: 141 GDLAVKVFDGRDLDGLEADIEEAFEYVRTVRPDASRDESSELYLVGKG 188
>D8J5Y9_HALJB (tr|D8J5Y9) Ribosomal RNA large subunit methyltransferase E
OS=Halalkalicoccus jeotgali (strain DSM 18796 / CECT
7217 / JCM 14584 / KCTC 4019 / B3) GN=rrmJ PE=3 SV=1
Length = 251
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 45/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY +A++ GY +R+A+KL Q+ + +++ G V+DLG APG WLQVA + +G
Sbjct: 5 DEYYNKAKQQGYRSRAAYKLQQLDEMEDLLSHGDRVVDLGAAPGGWLQVASERVGT---- 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS-VILSDMCPSVS 126
G+V+G+D+++ + V TI D ++ R ++ G + +LSDM P+++
Sbjct: 61 GTVIGVDLQR-----IDSLEGVETIKGD---MTDEGTRGEIIERIGEADTVLSDMAPNMT 112
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G + D A SV L +A + A + +L G
Sbjct: 113 GEYSLDQARSVHLARQAFETA--------------------------------REILTPG 140
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
G+L++K+ E D + + F P A+R S E+YLI +G
Sbjct: 141 GDLVVKVFEGRDLDALRDDMEAEFEYVRTTSPAASREESSEVYLIAKGF 189
>K1ZMF3_9BACT (tr|K1ZMF3) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium GN=ftsJ PE=3 SV=1
Length = 200
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 45/232 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +Y +A++ GYVARSA+K++++ I K G +V+DLG APG WLQV + LG
Sbjct: 10 DHFYLKAKKEGYVARSAYKIVELSDRFGIFKLGHTVIDLGSAPGGWLQVGSKQLGT---K 66
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTI--AADVMT-LSKHQLRALSPKQKGFSVILSDMCPS 124
G ++GID + P+H +TI AD +S+ ++A P G ++SDM P+
Sbjct: 67 GRIIGID-----LLPLHMQIGNNTIFKQADFTDPVSQSWIKAQCP--HGVDWVISDMSPN 119
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV DA SV L +AL+ A+ L+
Sbjct: 120 LSGVKFADALASVSLCEQALEFAL--------------------------------ITLK 147
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GG + K+ + + K F+K + P+ATR SSREIY++ LK
Sbjct: 148 NGGGFLCKVFPGAELGVLESNIKSRFKKFHHIIPEATRGSSREIYIVGLRLK 199
>F6BBX8_METIK (tr|F6BBX8) Ribosomal RNA large subunit methyltransferase E
OS=Methanotorris igneus (strain DSM 5666 / JCM 11834 /
Kol 5) GN=rlmE PE=3 SV=1
Length = 245
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 44/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYY A++ Y +R+ FKL Q+ + +K G V+DLGCAPG WLQ A + +G
Sbjct: 15 DFYYNLAKKQKYRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVG---DR 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSPKQKGFSVILSDMCPS 124
G V+G+D++ VK P+ D+ V TI D+ T+ K + L P + +V++SD P+
Sbjct: 72 GFVVGVDLQSVK--PLPYDN-VKTIKGDMTKEETIQKIR-EILYPAKP--TVVISDASPN 125
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV D A S+EL AL +A +L+
Sbjct: 126 ISGVWDVDHARSIELTTIALKIAT--------------------------------QLLK 153
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GN ++K+ + + + + + F K +P+A+R S E+Y++ +
Sbjct: 154 ERGNFVVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASRKESSEVYVVAK 202
>K2FTP1_9BACT (tr|K2FTP1) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium (gcode 4) GN=rlmE PE=3 SV=1
Length = 204
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY EA++L Y ARS FKLL+IQ+ N+I+ +VLD+ AP S+LQ + +G
Sbjct: 14 DKYYHEAKKLWYRARSVFKLLEIQEKFNLIRPNYNVLDVWAAPWSFLQAIRKIIG---DS 70
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
++GID++K++ P + + + + K S K F VI SD+ PS +G
Sbjct: 71 WKIVGIDIQKIERFPFN---NIFLLQESIFEKEKVTEFINSVWIKEFDVITSDIAPSTTG 127
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
T D SVEL + LD+A L+
Sbjct: 128 QTWVDQYRSVELNLAILDVA--------------------------------DIFLKKWW 155
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
N+I+K+ ED ++ K + K S +P+A R S E Y +C G K
Sbjct: 156 NMILKVFVWEDVNDLVFPIKKRYEKFSRFKPRACRDRSFEEYFLCLGKK 204
>N6Z6R5_9RHOO (tr|N6Z6R5) 23S rRNA methyltransferase J OS=Thauera linaloolentis
47Lol = DSM 12138 GN=rrmJ PE=4 SV=1
Length = 207
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + AQ GY AR+A+KLL++ + +++K G+ V+DLG PGSW QVA + GP
Sbjct: 17 DPYVQRAQAEGYRARAAYKLLEVDERDHLLKPGAVVVDLGSTPGSWCQVAVKRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG--FSVILSDMCPSV 125
G V +DV P+ + V + D L L + KG V+LSDM P++
Sbjct: 74 GQVFALDVL-----PMEAVAGVDFLQGDFT--EDAVLEDLESRLKGARADVVLSDMAPNL 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV D A S+ L ALD AV L+
Sbjct: 127 SGVAAVDQARSIHLCELALDFAVRH--------------------------------LKP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKP 237
GG ++K+ + E E + + F +PKA+R S E+YL+ +G +P
Sbjct: 155 GGQFLVKVFQGEGFMEYRKQMEAAFASVQVRKPKASRDRSAEVYLLGKGPRP 206
>M4K9R5_9PSED (tr|M4K9R5) 23S rRNA methyltransferase J OS=Pseudomonas poae
RE*1-1-14 GN=rrmJ PE=4 SV=1
Length = 216
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+++KLL+IQ +I+ G SV+DLG APG W QV + +G
Sbjct: 17 DPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIG---GQ 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ ++ P VH D ++ A++ L A+ Q +++SDM P
Sbjct: 74 GRLIASDILEMDSIPDVTFVHGDFTQDSVLAEI-------LEAVGNSQ--VDLVISDMAP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D ++ L ALDLA VL
Sbjct: 125 NMSGLPAVDMPRAMFLCELALDLA--------------------------------GRVL 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+ ++K+ + E E + + LF K +P ++R SRE YL+C+G +
Sbjct: 153 RPGGDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGFR 205
>L7HDL1_PSEFL (tr|L7HDL1) Ribosomal RNA large subunit methyltransferase E
OS=Pseudomonas fluorescens BRIP34879 GN=rrmJ PE=3 SV=1
Length = 216
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+++KLL+IQ +I+ G SV+DLG APG W QV + +G
Sbjct: 17 DPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIG---GQ 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ ++ P VH D ++ A++ L A+ Q +++SDM P
Sbjct: 74 GRLIASDILEMDSIPDVTFVHGDFTQDSVLAEI-------LEAVGNSQ--VDLVISDMAP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D ++ L ALDLA VL
Sbjct: 125 NMSGLPAVDMPRAMFLCELALDLA--------------------------------GRVL 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+ ++K+ + E E + + LF K +P ++R SRE YL+C+G +
Sbjct: 153 RPGGDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGFR 205
>D0LT48_HALO1 (tr|D0LT48) Ribosomal RNA large subunit methyltransferase E
OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 /
SMP-2) GN=rlmE PE=3 SV=1
Length = 199
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 46/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y++ A++ G++AR+ FKL +I ++ + G VLDLGCAPGSWLQ +GP
Sbjct: 12 DVYHQRARKRGFLARAVFKLEEIDDKLDLFRRGDRVLDLGCAPGSWLQYCRTRVGPT--- 68
Query: 68 GSVLGIDVKKV--KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G ++GID + ++P ++ DV ++ L+ + F V+LSDM P
Sbjct: 69 GELVGIDRGPLDAEIPGARL------LSGDVFEVAPETLQG---PLEAFDVVLSDMAPDT 119
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+G+ D A S L RALD+A VL
Sbjct: 120 TGIRHLDQARSESLFERALDIA--------------------------------DAVLAP 147
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GGN + KL + ++ + C+ F ++PK +R S E Y++ +G +
Sbjct: 148 GGNFVGKLFQGPAFSDLVKRCRRDFDAVKIVKPKGSRQRSIEQYVVARGRR 198
>I2BW22_PSEFL (tr|I2BW22) Ribosomal RNA large subunit methyltransferase E
OS=Pseudomonas fluorescens A506 GN=rrmJ PE=3 SV=1
Length = 216
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+++KLL+IQ +I+ G SV+DLG APG W QV + +G
Sbjct: 17 DPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIG---GQ 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ ++ P VH D + A++ L A+ Q +++SDM P
Sbjct: 74 GRLIASDILEMDSIPDVTFVHGDFTEDKVLAEI-------LEAVGNSQ--VDLVISDMAP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D ++ L ALDLA VL
Sbjct: 125 NMSGLPAVDMPRAMFLCELALDLA--------------------------------GRVL 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+ ++K+ + E E + + LF K +P ++R SRE YL+C+G +
Sbjct: 153 RPGGDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGFR 205
>B7S0C3_9GAMM (tr|B7S0C3) Ribosomal RNA large subunit methyltransferase E
OS=marine gamma proteobacterium HTCC2148 GN=rrmJ PE=3
SV=1
Length = 208
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 44/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + ++A+R GY +R+ +KLL++Q +++K G +V+DLG APG W QV+ +G H
Sbjct: 18 DLFVQQAKRDGYRSRACYKLLELQDKDHLMKPGMTVVDLGSAPGGWSQVSADLVG---HK 74
Query: 68 GSVLGIDVKKVKVPPVHCDS--RVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSV 125
G V+ D+ +H D+ V I D + + + + +++SDM P++
Sbjct: 75 GRVVASDI-------LHMDNLADVEFIQGDFTEDAVFERILQAIDGESVDLVVSDMAPNM 127
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV D S+ L ALD+A + VL
Sbjct: 128 SGVAAVDQPGSMYLVELALDMA--------------------------------RRVLSP 155
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GG+ + K+ + E E+ + + F K +PKA+RP SRE+YL+ G K
Sbjct: 156 GGSFVTKVFQGEGFDELFRDTRDSFDKVLTRKPKASRPRSREVYLVASGFK 206
>F8ANX3_METOI (tr|F8ANX3) Ribosomal RNA large subunit methyltransferase E
OS=Methanothermococcus okinawensis (strain DSM 14208 /
JCM 11175 / IH1) GN=rlmE PE=3 SV=1
Length = 288
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 43/226 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYYK A++ Y +R+++KLLQ+ + NIIK V+DLGCAPG WLQ A +G G
Sbjct: 15 DFYYKLAKKNKYRSRASYKLLQLNEKFNIIKENDVVVDLGCAPGGWLQAARDIVG---EG 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK--HQLRALSPKQKGFSVILSDMCPSV 125
G V G+D++ VK P+ ++ V I D MT + +L L P + ++ D P++
Sbjct: 72 GFVAGVDLQGVK--PLKYEN-VIAIKGD-MTKKETIEKLMKLLPSKA--DAVICDASPNI 125
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV +D S+EL AL A +L+
Sbjct: 126 SGVWERDHTRSLELTTIALITAT--------------------------------KLLKK 153
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
GN ++K+ + + + K F+K +PKA+R S E+Y++
Sbjct: 154 DGNFVVKVFQGSLFNDYVALLKNYFKKVQTTKPKASRDVSAEVYVV 199
>K2GWA3_9BACT (tr|K2GWA3) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium (gcode 4) GN=rlmE PE=3 SV=1
Length = 206
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ EA+RL Y ARSAFKLL+IQ+ N+IK SVLD+ AP S+LQV + + +
Sbjct: 15 DRYFMEAKRLWYRARSAFKLLEIQEKFNLIKPWFSVLDVWAAPWSFLQVIYKIIW---ND 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG---FSVILSDMCPS 124
++GID++K++ P + I +L+ + ++KG F +I SD+ PS
Sbjct: 72 AKIVGIDIQKIEPLPYQ-----NLILIQESIFEYEKLKVIF-EEKGLSKFDLITSDIAPS 125
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+G T D SVEL + +D A L+
Sbjct: 126 TTGQTWVDQYRSVELNLAIVDFA--------------------------------DVFLK 153
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
NL++K+ ED ++ K ++ +PKA R S E Y IC G
Sbjct: 154 KWWNLLLKVFVGEDVNDLIFPIKKKYKDLRRFKPKACRDRSFEEYFICMG 203
>G0HQX2_HALHT (tr|G0HQX2) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula hispanica (strain ATCC 33960 / DSM 4426 /
JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)
GN=ftsJ PE=3 SV=1
Length = 263
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 47/234 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIG---ER 61
Query: 68 GSVLGID---VKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILS 119
G+++G+D + +++ P + V + D+ S K ++R + + G V++S
Sbjct: 62 GTLVGVDRQTIDELEDP----EPTVEYVRGDMTEDSTKDEIREIVGESDGSGGPVDVVIS 117
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P+++G D A SV L +A ++A
Sbjct: 118 DMAPNMTGQYDLDHARSVHLVRQAFEVAT------------------------------- 146
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 147 -DLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>G0H4D7_METMI (tr|G0H4D7) Ribosomal RNA large subunit methyltransferase E
OS=Methanococcus maripaludis GN=rlmE PE=3 SV=1
Length = 258
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 43/226 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A+R Y +R+ +KL Q+ + N+IK + V+DLGCAPG WLQ A +G
Sbjct: 15 DHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVG---DN 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK--HQLRALSPKQKGFSVILSDMCPSV 125
G ++GID++ VK P+ D+ V I D MT + Q + L P++ VI+ D P++
Sbjct: 72 GFIVGIDLQTVK--PLPHDN-VIAIKGD-MTKEEILKQAKDLLPEKP--DVIICDASPNI 125
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV D S+EL AL A +L+
Sbjct: 126 SGVWDVDHVRSLELTTMALMTAT--------------------------------KMLKK 153
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
GGN ++K+ + + ++ Q+ F K+ +P+A+R S E+Y+I
Sbjct: 154 GGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASRDESAEVYVI 199
>I4L3P6_9PSED (tr|I4L3P6) Ribosomal RNA large subunit methyltransferase E
OS=Pseudomonas synxantha BG33R GN=rrmJ PE=3 SV=1
Length = 216
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+++KLL+IQ +I+ G SV+DLG APG W QV + +G
Sbjct: 17 DPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIG---GQ 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ ++ P VH D + A++ L A+ Q +++SDM P
Sbjct: 74 GRLIASDILEMDSIPDVTFVHGDFTEDKVLAEI-------LEAVGNSQ--VDLVISDMAP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D ++ L ALDLA VL
Sbjct: 125 NMSGLPAVDMPRAMFLCELALDLA--------------------------------GRVL 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+ ++K+ + E E + + LF K +P ++R SRE YL+C+G +
Sbjct: 153 RPGGDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGYR 205
>I4K879_PSEFL (tr|I4K879) Ribosomal RNA large subunit methyltransferase E
OS=Pseudomonas fluorescens SS101 GN=rrmJ PE=3 SV=1
Length = 216
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+++KLL+IQ +I+ G SV+DLG APG W QV + +G
Sbjct: 17 DPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIG---GQ 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ ++ P VH D + A++ L A+ Q +++SDM P
Sbjct: 74 GRLIASDILEMDSIPDVTFVHGDFTEDKVLAEI-------LEAVGNSQ--VDLVISDMAP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D ++ L ALDLA VL
Sbjct: 125 NMSGLPAVDMPRAMFLCELALDLA--------------------------------GRVL 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
R GG+ ++K+ + E E + + LF K +P ++R SRE YL+C+G +
Sbjct: 153 RPGGDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGYR 205
>R9DXI6_PISSA (tr|R9DXI6) FtsJ-like methyltransferase family protein
OS=Piscirickettsia salmonis LF-89 = ATCC VR-1361
GN=K661_0648 PE=4 SV=1
Length = 208
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY ++A+ GY +R+++KL ++Q+ II+ G +V+DLG APG W Q+A +G
Sbjct: 18 DFYVQKARAEGYRSRASYKLKEVQEKDKIIRRGMTVIDLGAAPGGWSQLAADWVGA---S 74
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D + P+ V + D + + + + ++LSDM P++SG
Sbjct: 75 GCVIGLD-----LLPMDPLENVIALQGDFTEKAVYDCLVTTLAGRPVDIVLSDMAPNMSG 129
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ T D A ++ L AL A EQ+ L+ GG
Sbjct: 130 IDTSDQAQAMYLVELALYFA--------------------EQA------------LKPGG 157
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+L++K+ + S+E + + F K +P A+RP SREIYL+ + +
Sbjct: 158 DLLVKVFQGVGSQEYIKALRTKFAKVVTRKPAASRPRSREIYLLARNFQ 206
>M0L0L3_9EURY (tr|M0L0L3) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula californiae ATCC 33799 GN=rrmJ PE=3 SV=1
Length = 263
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 47/234 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIG---ER 61
Query: 68 GSVLGID---VKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILS 119
G+++G+D + ++ P + V + D+ S K ++R + + G V++S
Sbjct: 62 GTLVGVDRQTIDDLEDP----EPTVEYVRGDMTEDSTKDEIREIVGESDGSGGPVDVVIS 117
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P+++G D A SV L +A ++A
Sbjct: 118 DMAPNMTGQYDLDHARSVHLVRQAFEVAT------------------------------- 146
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 147 -DLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>M0LSH4_HALJP (tr|M0LSH4) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula japonica DSM 6131 GN=rrmJ PE=3 SV=1
Length = 263
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 47/234 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIG---ER 61
Query: 68 GSVLGID---VKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILS 119
G+++G+D + ++ P + V + D+ S K ++R + + G V++S
Sbjct: 62 GTLVGVDRQTIDDLEDP----EPTVEYVRGDMTEDSTKDEIREIVGESDGSGGPVDVVIS 117
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P+++G D A SV L +A ++A
Sbjct: 118 DMAPNMTGQYDLDHARSVHLVRQAFEVAT------------------------------- 146
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 147 -DLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>M0KWZ1_9EURY (tr|M0KWZ1) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula amylolytica JCM 13557 GN=rrmJ PE=3 SV=1
Length = 263
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 47/234 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIGER--- 61
Query: 68 GSVLGID---VKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILS 119
G+++G+D + +++ P + V + D+ S K ++R + + G V++S
Sbjct: 62 GTLVGVDRQTIDELEDP----EPTVEYVRGDMTEDSTKDEIREIVGEGDGSGGPVDVVIS 117
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P+++G D A SV L +A ++A
Sbjct: 118 DMAPNMTGQYDLDHARSVHLVRQAFEVAT------------------------------- 146
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 147 -DLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>M0JP44_HALVA (tr|M0JP44) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula vallismortis ATCC 29715 GN=rrmJ PE=3 SV=1
Length = 263
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 41/231 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIG---ER 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILSDMC 122
G+++G+D + + + V + D+ S K ++R + + G V++SDM
Sbjct: 62 GTLVGVDRQTID-DLDDPEPTVEYVRGDMTEDSTKDEIREIVGESDGTGGPVDVVISDMA 120
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P+++G D A SV L +A ++A +
Sbjct: 121 PNMTGQYDLDHARSVHLVRQAFEVAT--------------------------------DL 148
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 149 LDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>G2FGC7_9GAMM (tr|G2FGC7) Ribosomal RNA large subunit methyltransferase E
OS=endosymbiont of Tevnia jerichonana (vent Tica)
GN=rlmE PE=3 SV=1
Length = 206
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 44/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQ+LGY +R+ FKLL+IQ+ +IK G V+DLG APG W QVA +G
Sbjct: 17 DEYVKRAQKLGYRSRAVFKLLEIQEKGRLIKPGMRVVDLGAAPGGWSQVARDLVG---EK 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG--FSVILSDMCPSV 125
G V+ +D+ +++ P+ + V I D + L L + G +++SDM P+V
Sbjct: 74 GRVVALDI--LEMDPI---AGVTIIQGDFR--EEGPLAQLREQLAGEPVDLVISDMAPNV 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+G+ T D S+ L ALD A K VLR
Sbjct: 127 TGMVTVDQPRSMYLCELALDFA--------------------------------KEVLRP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GG ++K+ + E + + + F + +P+++R SREIYL+ K
Sbjct: 155 GGGFVVKVFQGEGFDDYLREMRQAFGRVVSRKPRSSRAKSREIYLVAGNFK 205
>G2DDC1_9GAMM (tr|G2DDC1) Ribosomal RNA large subunit methyltransferase E
OS=endosymbiont of Riftia pachyptila (vent Ph05) GN=carB
PE=3 SV=1
Length = 206
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 44/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQ+LGY +R+ FKLL+IQ+ +IK G V+DLG APG W QVA +G
Sbjct: 17 DEYVKRAQKLGYRSRAVFKLLEIQEKGRLIKPGMRVVDLGAAPGGWSQVARDLVG---EK 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG--FSVILSDMCPSV 125
G V+ +D+ +++ P+ + V I D + L L + G +++SDM P+V
Sbjct: 74 GRVVALDI--LEMDPI---AGVTIIQGDFR--EEGPLAQLREQLAGEPVDLVISDMAPNV 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+G+ T D S+ L ALD A K VLR
Sbjct: 127 TGMVTVDQPRSMYLCELALDFA--------------------------------KEVLRP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GG ++K+ + E + + + F + +P+++R SREIYL+ K
Sbjct: 155 GGGFVVKVFQGEGFDDYLREMRQAFGRVVSRKPRSSRAKSREIYLVAGNFK 205
>E1K1V8_DESFR (tr|E1K1V8) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio fructosovorans JJ GN=rlmE PE=3 SV=1
Length = 222
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K+A++ Y ARS +KL +I+K S+++ G++VLDLG PGSW A +G
Sbjct: 6 DHYFKKAKQDNYPARSVYKLEEIEKQSHLLFPGAAVLDLGACPGSWTLFAASRVG---EK 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G VL ID+ + V + D++ L A + + F V+LSDM P +G
Sbjct: 63 GRVLSIDLNEAG---TAFPGNVTYLTGDMLDPGPEILAAFA-RLGPFDVVLSDMAPKTTG 118
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V D A S+EL AL +A + R L+ GG
Sbjct: 119 VKFADQARSLELCEAALSVA----------------FTR----------------LKPGG 146
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
++K+ + D+ + + F K +PK++R S+EI+ + G +
Sbjct: 147 AFVVKIFQGPDAPAFQKGLRDYFDKVRVAKPKSSRAESKEIFYVATGFR 195
>M0K3I7_9EURY (tr|M0K3I7) Ribosomal RNA large subunit methyltransferase E
OS=Haloarcula sinaiiensis ATCC 33800 GN=rrmJ PE=3 SV=1
Length = 263
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 47/234 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + ++ G +V+DLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIGER--- 61
Query: 68 GSVLGID---VKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKG----FSVILS 119
G+++G+D + ++ P + + + D+ S K ++R + + G V++S
Sbjct: 62 GTLVGVDRQTIDDLEDP----EPTIEYVRGDMTEDSTKDEIREIVGESDGSGGPVDVVIS 117
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P+++G D A SV L +A ++A
Sbjct: 118 DMAPNMTGQYDLDHARSVHLVRQAFEVAT------------------------------- 146
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+L GG+ K+ + +D ++ +P F +RP A+R SS E+YL+ +
Sbjct: 147 -DLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAK 199
>I7J8G6_METBM (tr|I7J8G6) Ribosomal RNA large subunit methyltransferase E
OS=Methanoculleus bourgensis (strain ATCC 43281 / DSM
3045 / OCM 15 / MS2) GN=rrmJ PE=3 SV=1
Length = 203
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 1 MGASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQS 60
MG+ D Y++A + GY AR+A+KLL+IQ+ S I+ +V+DLG APGSWLQV +
Sbjct: 1 MGSQWTKDSVYRKAMKAGYRARAAYKLLEIQQKSGFIRPDDNVVDLGAAPGSWLQV-IRD 59
Query: 61 LGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSD 120
L GG V+G+D+ P+ V TI D T Q R +V++SD
Sbjct: 60 L----TGGKVIGVDLN-----PIVPMEGVTTITGD-FTDPLIQERIREEAGGIVNVVVSD 109
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
P +SG + D A +V LG AL A
Sbjct: 110 AAPKLSGQKSYDQARAVGLGEDALAFAC-------------------------------- 137
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+L+ GGNL+IK + E ++ + F R KA+R S E+Y+I + K
Sbjct: 138 TILKPGGNLVIKSFQGELFADLLAEVRKHFYSVRGYRTKASRKGSAEVYIIAKNFK 193
>F4BXV5_METCG (tr|F4BXV5) Ribosomal RNA large subunit methyltransferase E
OS=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 /
JCM 10134 / NBRC 103675 / OCM 69 / GP-6) GN=rrmJ PE=3
SV=1
Length = 256
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 47/230 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY++A+ GY ARSA+KLLQI + ++IK G SV+DLG APG WLQVA Q L G
Sbjct: 7 DHYYRKAKEEGYRARSAYKLLQINEKFHVIKKGDSVVDLGAAPGGWLQVA-QKLS----G 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK-HQLR-ALSPKQKGFSVILSDMCPSV 125
G ++G+D++ + P V T AD+ LS Q++ AL V++ D P++
Sbjct: 62 GKIVGVDLEGITPIP-----GVVTFRADITALSTVDQVKDALGGDA---DVVICDAAPNL 113
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG +D A+S++L AL++A K +LR
Sbjct: 114 SGAWDRDHAISIDLARSALEMA--------------------------------KKLLRP 141
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GN ++K+ + + + + F P A+R S E Y++ + L
Sbjct: 142 RGNFVVKVFQGDMFIDFLNDVRREFAVVHAHSPAASRKESAETYVVGKKL 191
>R5ZTR9_9PROT (tr|R5ZTR9) Ribosomal RNA large subunit methyltransferase E
OS=Proteobacteria bacterium CAG:139 GN=BN492_01143 PE=4
SV=1
Length = 214
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL--Q 65
D + K++ + GY ARS +KL++I IIK G SV+DLG APGSW Q+ + L +
Sbjct: 21 DPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLGAAPGSWTQIVKERLTDKDGK 80
Query: 66 HGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILSDMCPS 124
G V+ +D + P+ VH + D +L L +K V+LSDM P+
Sbjct: 81 IDGKVIAMD-----ILPMEPIEGVHFLQGDFREQEVADKLTDLLEGEK-VDVVLSDMAPN 134
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV DAA + L ALD A K L+
Sbjct: 135 LSGVAAADAARCLLLNELALDFA--------------------------------KENLK 162
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ + K+ + + + CK FRK S +P+A+R SS E+Y++ + LK
Sbjct: 163 KNGSFVCKVFQGSGYSQYVEACKKTFRKVSVRKPEASRSSSAEVYIVARDLK 214
>F3QH33_9BURK (tr|F3QH33) Ribosomal RNA large subunit methyltransferase E
OS=Parasutterella excrementihominis YIT 11859 GN=rlmE
PE=3 SV=1
Length = 214
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL--Q 65
D + K++ + GY ARS +KL++I IIK G SV+DLG APGSW Q+ + L +
Sbjct: 21 DPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLGAAPGSWTQIVKERLTDKDGK 80
Query: 66 HGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILSDMCPS 124
G V+ +D + P+ VH + D +L L +K V+LSDM P+
Sbjct: 81 IDGKVIAMD-----ILPMEPIEGVHFLQGDFREQEVADKLTDLLEGEK-VDVVLSDMAPN 134
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV DAA + L ALD A K L+
Sbjct: 135 LSGVAAADAARCLLLNELALDFA--------------------------------KENLK 162
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ + K+ + + + CK FRK S +P+A+R SS E+Y++ + LK
Sbjct: 163 KNGSFVCKVFQGSGYSQYVEACKKTFRKVSVRKPEASRSSSAEVYIVARDLK 214
>D9Y392_9BURK (tr|D9Y392) Ribosomal RNA large subunit methyltransferase E
OS=Burkholderiales bacterium 1_1_47 GN=rlmE PE=3 SV=1
Length = 214
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL--Q 65
D + K++ + GY ARS +KL++I IIK G SV+DLG APGSW Q+ + L +
Sbjct: 21 DPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLGAAPGSWTQIVKERLTDKDGK 80
Query: 66 HGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILSDMCPS 124
G V+ +D + P+ VH + D +L L +K V+LSDM P+
Sbjct: 81 IDGKVIAMD-----ILPMEPIEGVHFLQGDFREQEVADKLTDLLEGEK-VDVVLSDMAPN 134
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SGV DAA + L ALD A K L+
Sbjct: 135 LSGVAAADAARCLLLNELALDFA--------------------------------KENLK 162
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ + K+ + + + CK FRK S +P+A+R SS E+Y++ + LK
Sbjct: 163 KNGSFVCKVFQGSGYSQYVEACKKTFRKVSVRKPEASRSSSAEVYIVARDLK 214
>H5SGR6_9GAMM (tr|H5SGR6) Ribosomal RNA large subunit methyltransferase E
OS=uncultured gamma proteobacterium GN=rlmE PE=3 SV=1
Length = 206
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + AQ GY +R+ FKL +IQ I+ G +V+DLG APG W Q A + P G
Sbjct: 17 DAYVRLAQAQGYRSRAVFKLQEIQARDRILAPGMTVVDLGAAPGGWSQFAADQIKP---G 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G ++ +D+ P+ V + D Q +++ +V+LSD+ P++SG
Sbjct: 74 GKIVAVDIL-----PMDPLPGVTFLQGDFTEEQTWQRLKAVLQERPVNVVLSDLAPNLSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A +V L ALD A EQ +L GG
Sbjct: 129 NRSVDQARAVHLAELALDTA--------------------EQ------------LLVEGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L+ KL + E + + + F K + +PKA+R SRE+YL+ QG +
Sbjct: 157 CLLTKLFQGEGFEAFQKRLRTRFAKVTTRKPKASRSRSREVYLLAQGFR 205
>C4ZKH1_THASP (tr|C4ZKH1) Ribosomal RNA large subunit methyltransferase E
OS=Thauera sp. (strain MZ1T) GN=rlmE PE=3 SV=1
Length = 207
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 44/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + + AQ GY AR+AFKLL+I + ++++ G+ V+DLG APGSW Q+A + GP
Sbjct: 17 DPWVQRAQAEGYRARAAFKLLEIDERDHLLRPGAVVVDLGAAPGSWCQLAVKRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS--VILSDMCPSV 125
G + +D+ P+ + V + D L L + G S V+LSDM P++
Sbjct: 74 GRIFALDLL-----PMEPVAGVEFLLGDFT--EDAVLEELEARLGGASVDVVLSDMAPNL 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV T D A SV L ALD AV L+
Sbjct: 127 SGVATVDQARSVHLCELALDFAVRH--------------------------------LKP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG ++K+ + E E + + F +PKA+R S E+YL+ +G
Sbjct: 155 GGQFVVKVFQGEGFMEYRKQMEAAFVSVQVRKPKASRDRSAEVYLVGRG 203
>N6Y4C5_9RHOO (tr|N6Y4C5) 23S rRNA methyltransferase J OS=Thauera aminoaromatica
S2 GN=rrmJ PE=4 SV=1
Length = 207
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 44/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + + AQ GY AR+AFKLL+I + ++++ G+ V+DLG APGSW Q+A + GP
Sbjct: 17 DPWVQRAQAEGYRARAAFKLLEIDERDHLLRPGAVVVDLGAAPGSWCQLAVKRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS--VILSDMCPSV 125
G + +D+ P+ + V + D L L + G S V+LSDM P++
Sbjct: 74 GRIFALDLL-----PMEPVAGVEFLLGDFT--EDAVLEELEARLGGASVDVVLSDMAPNL 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV T D A SV L ALD AV L+
Sbjct: 127 SGVATVDQARSVHLCELALDFAVRH--------------------------------LKP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG ++K+ + E E + + F +PKA+R S E+YL+ +G
Sbjct: 155 GGQFVVKVFQGEGFMEYRKQMEAAFVSVQVRKPKASRDRSAEVYLVGRG 203
>I2JIW1_9GAMM (tr|I2JIW1) Ribosomal RNA large subunit methyltransferase E
OS=gamma proteobacterium BDW918 GN=rlmE PE=3 SV=1
Length = 207
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 111/245 (45%), Gaps = 54/245 (22%)
Query: 2 GASGA------PDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQ 55
G+SGA D Y K AQR GY +R+ +KLL+IQ+ +IK G V+DLG APG W Q
Sbjct: 6 GSSGAWLKEHFDDQYVKMAQRDGYRSRACYKLLEIQEKDRLIKPGMCVVDLGSAPGGWSQ 65
Query: 56 VACQSLGPLQHGGSVLGIDVKKVK----VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQ 111
VA +G H G VL D+ ++ V V D + ++M + L
Sbjct: 66 VAAMLVG---HHGRVLASDILEMDSIAGVEFVRGDFTEQEVIDELMAHLGNSKADL---- 118
Query: 112 KGFSVILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSV 171
++SDM P++SG+ D S+ L ALD+A
Sbjct: 119 -----VISDMAPNMSGMRDVDQPQSMYLCELALDMA------------------------ 149
Query: 172 DDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
VLR GG+ K+ + E E ++ + F K +P A+RP SRE+YL+
Sbjct: 150 --------GLVLRPGGSFATKIFQGEGFDEYMRLLRGRFSKVVTRKPAASRPRSREVYLV 201
Query: 232 CQGLK 236
GL+
Sbjct: 202 ATGLR 206
>F8CK38_MYXFH (tr|F8CK38) Ribosomal RNA large subunit methyltransferase E
OS=Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
GN=ftsJ, rrmJ PE=3 SV=1
Length = 206
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 40/232 (17%)
Query: 1 MGASGAP-DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQ 59
MG P D Y+++A++ G ARSAFK+ ++ K ++K G VLDLG APG +LQ+ +
Sbjct: 1 MGKPYRPKDHYFQKAKQEGLRARSAFKVDELIKRFPMVKKGHVVLDLGAAPGGFLQILAE 60
Query: 60 SLGPLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILS 119
++GP G V+G+D+ V + P V T DV+ + L F ++S
Sbjct: 61 AVGP---KGRVIGVDI--VAIRP-FSQPFVQTAVLDVLA-DDFDAKLLELHDGLFDAVIS 113
Query: 120 DMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDD 179
DM P SG+ D A S+ L +AL++A
Sbjct: 114 DMAPKTSGIKATDEARSLRLAGKALEVAA------------------------------T 143
Query: 180 KGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
+G R G + + K+ D ++ + LF + +RP+ATR +S E+YL+
Sbjct: 144 RG--RPGSSFVAKVFMGRDFEDFRNQLRALFEEVKVVRPEATRGASMEVYLV 193
>K2AFR6_9BACT (tr|K2AFR6) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium (gcode 4) GN=rlmE PE=3 SV=1
Length = 200
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
A D Y+ EA+RLG+ ARSAFKLL+IQ+ N+IK G ++LD+G APGS+LQV + +G
Sbjct: 5 AFVVQDKYFLEAKRLGFRARSAFKLLEIQEKFNLIKPGFNILDIGAAPGSFLQVIRKIIG 64
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK--HQLRALSPKQKGFSVILSD 120
G ++ ID++K++ ++ I + K +L + KQ F +I SD
Sbjct: 65 ---DTGKIVWIDIQKIEKLNF---PNIYLIQESIFETEKIVAELEKIWIKQ--FDLITSD 116
Query: 121 MCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDK 180
+ PS + + D SVEL + LD+A
Sbjct: 117 IAPSTTWQSGVDQYRSVELNLAILDVA--------------------------------D 144
Query: 181 GVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
L+ NL++K+ ED ++ K ++ ++P+A R S E Y +C
Sbjct: 145 IFLKKWANLVLKVFIWEDVDDLVGPIKKRYKTLRRIKPRACRDRSFEEYFVC 196
>C8X3N6_DESRD (tr|C8X3N6) Ribosomal RNA large subunit methyltransferase E
OS=Desulfohalobium retbaense (strain DSM 5692) GN=rlmE
PE=3 SV=1
Length = 199
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+K A++ Y ARS +KL ++ K + G +LDLG APGSW A + G
Sbjct: 6 DHYFKRAKQDNYPARSVYKLQELDKRFQFLAKGQRILDLGAAPGSWTLFAAKKTGA---A 62
Query: 68 GSVLGIDVKKVKVP-PVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+ +D++ + + P H T D + + + Q F V+LSDM P +
Sbjct: 63 GRVVAVDLQAIDIELPDHV-----TALQDDLLHPSPRFAEVMGSQAPFDVVLSDMAPKTT 117
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
GV D A S+EL A D+A+ ++ P G
Sbjct: 118 GVKITDQARSLELAEMARDVAL--------------------DTLKTP-----------G 146
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G ++K+ E D + + F+K +PK++R S+EI+++ G K
Sbjct: 147 GTFVVKIFEGPDVPQYVSDLRQYFKKVKTAKPKSSRAESKEIFVMGFGFK 196
>H8I669_METCZ (tr|H8I669) Ribosomal RNA large subunit methyltransferase E
OS=Methanocella conradii (strain DSM 24694 / JCM 17849 /
CGMCC 1.5162 / HZ254) GN=rrmJ PE=3 SV=1
Length = 261
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 44/228 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +Y +A+++GY +R+AFKL I + IIK+G V+DLG APG WLQVA + G
Sbjct: 16 DVFYNKAKQMGYRSRAAFKLKFINEKFGIIKAGDVVVDLGAAPGGWLQVAKE-----LSG 70
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D++K++ P+ V TI D MT + Q + +K +V++ D P+++G
Sbjct: 71 GTVIGVDLQKIE--PIEG---VITIKGD-MTSPETQQKIFEKVEK-VNVVICDAAPNLTG 123
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D A S++L ALD+A +L GG
Sbjct: 124 NWALDHARSIDLAKTALDVA--------------------------------SRLLVPGG 151
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
N ++K+ + + + + + F + + A+R S EIY+I +G
Sbjct: 152 NFLVKVFQGDLYQGFVEEAEKRFSRVYTYKSPASRAQSAEIYVIGKGF 199
>M9SLU0_9EURY (tr|M9SLU0) Cell division protein FtsJ / Ribosomal RNA large
subunit methyltransferase E / LSU rRNA Um2552
OS=Candidatus Methanomethylophilus alvus Mx1201
GN=MMALV_16630 PE=4 SV=1
Length = 220
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
++YYK A++ GY +R+++K++QI N+ G SV+DLG PG W QVA + +G
Sbjct: 7 EYYYKLAKKEGYRSRASYKIMQIDDRFNVFHDGDSVVDLGACPGGWSQVARERVGET--- 63
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++ +H V I D+ T ++ L V+LSDM P+++G
Sbjct: 64 GKVIGVDLRY-----IHPIDGVQFIIGDI-TDDNTMIKLLEMVGGKVDVVLSDMAPNIAG 117
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL A+D+ D+ +L+ GG
Sbjct: 118 HYSMDHARSIELCRYAVDVC-------------------------------DR-ILKKGG 145
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
L++K+ + + + F K P+A+RP+S E+Y+I +G
Sbjct: 146 CLVMKVFMGDMFYTLQTQLEKRFGKVIVHSPQASRPTSSEVYVISKGF 193
>N6ZF04_9RHOO (tr|N6ZF04) 23S rRNA methyltransferase J OS=Thauera sp. 28 GN=rrmJ
PE=4 SV=1
Length = 207
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + AQ GY AR+A+KLL+I + ++++ G+ V+DLG APGSW QVA + GP
Sbjct: 17 DPYVQRAQADGYRARAAYKLLEIDERDHLLRPGAVVVDLGAAPGSWCQVAVKRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
V +D+ + + PV + V I D S +L + V+LSDM P++SG
Sbjct: 74 ARVFALDL--LPMEPV---AGVDFILGDFTEDSVLELLEARLEGARVDVVLSDMAPNLSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V T D A S+ L ALD A L+ GG
Sbjct: 129 VATVDQARSIHLCELALDFAARH--------------------------------LKPGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
++K+ + E + + + F +PKA+R S E+YL+ +G
Sbjct: 157 QFVVKVFQGEGFMDFRKQMEGAFASVQVRKPKASRDRSAEVYLVGKG 203
>N6Y1T1_9RHOO (tr|N6Y1T1) 23S rRNA methyltransferase J OS=Thauera sp. 27 GN=rrmJ
PE=4 SV=1
Length = 207
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + AQ GY AR+A+KLL+I + ++++ G+ V+DLG APGSW QVA + GP
Sbjct: 17 DPYVQRAQADGYRARAAYKLLEIDERDHLLRPGAVVVDLGAAPGSWCQVAVKRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
V +D+ + + PV + V I D S +L + V+LSDM P++SG
Sbjct: 74 ARVFALDL--LPMEPV---AGVDFILGDFTEDSVLELLEARLEGARVDVVLSDMAPNLSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V T D A S+ L ALD A L+ GG
Sbjct: 129 VATVDQARSIHLCELALDFAARH--------------------------------LKPGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
++K+ + E + + + F +PKA+R S E+YL+ +G
Sbjct: 157 QFVVKVFQGEGFMDFRKQMEGAFASVQVRKPKASRDRSAEVYLVGKG 203
>N6ZQY6_9RHOO (tr|N6ZQY6) 23S rRNA methyltransferase J OS=Thauera phenylacetica
B4P GN=rrmJ PE=4 SV=1
Length = 207
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + + AQ GY AR+AFKLL+I + +++ G+ V+DLG APGSW QVA + GP
Sbjct: 17 DPWVQRAQAEGYRARAAFKLLEIDERDRLLRPGAVVVDLGAAPGSWCQVAVRRCGP---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS--VILSDMCPSV 125
+ +D+ ++ P D + D + L L + G S V+LSDM P++
Sbjct: 74 ARIFALDLLPME-PVAGVDFLLGDFTEDAV------LEELESRLGGASVDVVLSDMAPNL 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGV T D A SV L ALD A L+
Sbjct: 127 SGVATVDQARSVNLCELALDFAARH--------------------------------LKP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG ++K+ + E E + + F +PKA+R S E+YL+ +G
Sbjct: 155 GGQFVVKVFQGEGFMEFRKQMEAAFASVQVRKPKASRDRSAEVYLLGKG 203
>N6YID8_9RHOO (tr|N6YID8) 23S rRNA methyltransferase J OS=Thauera sp. 63 GN=rrmJ
PE=4 SV=1
Length = 207
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 44/229 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + AQ+ GY AR+A+KL+++ + ++KSG+ V+DLG PGSW QVA + G
Sbjct: 17 DPYVQRAQQDGYRARAAYKLIEVDERDRLLKSGAVVVDLGSTPGSWCQVAVKRCGA---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG--FSVILSDMCPSV 125
G V +D+ ++ P D D + L L + +G V+LSDM P++
Sbjct: 74 GKVFALDILPME-PVAGVDFLNGDFTEDAV------LEDLESRLEGAKVDVVLSDMAPNL 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SGVT+ D A S+ L ALD AV L+
Sbjct: 127 SGVTSVDQARSIHLCELALDFAVRH--------------------------------LKP 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
GG ++K+ + E E + + F +PKA+R S E+YL+ +G
Sbjct: 155 GGQFLVKVFQGEGFMEYRKQMEAAFASVQVRKPKASRDRSAEVYLLGKG 203
>M5GFL5_DACSP (tr|M5GFL5) 23S ribosomal RNA methyltransferase OS=Dacryopinax sp.
(strain DJM 731) GN=DACRYDRAFT_76575 PE=4 SV=1
Length = 257
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 YVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGSVLGIDVKKV 78
Y +R+AFKLL+IQ+ II++G +V+DLGCAPG+WLQVA + +G G VLG+D+ +
Sbjct: 48 YRSRAAFKLLEIQEKFGIIRAGDTVVDLGCAPGAWLQVAGEVVGKDGLSGRVLGVDL--L 105
Query: 79 KVPPVHCDSRVHTIAADVMTLSKH--QLRAL-------SPKQKG--FSVILSDMCPSVSG 127
+ P+ + I D ++ S RAL P + G V+LSDM P++SG
Sbjct: 106 RTDPLENTT---IIQGDFLSASTQLELARALRGSSEEGEPAKLGRCVDVVLSDMAPNISG 162
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
T D A S+ L + AVG R++ GG
Sbjct: 163 NRTSDVANSLRLS----EAAVGFTMRFLRLGTDAAPRQRKQ-----------------GG 201
Query: 188 NLIIKLLESEDSKEI-SQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
L++K + E +Q P F++ +PK++R S E Y +C L
Sbjct: 202 ALVMKYFAHPELTEFKTQYLIPYFKRVIDFKPKSSRKESAETYWVCMDL 250
>F8GJL8_NITSI (tr|F8GJL8) Ribosomal RNA large subunit methyltransferase E
OS=Nitrosomonas sp. (strain Is79A3) GN=ftsJ, rrmJ PE=3
SV=1
Length = 205
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DF+ K+A++ GY +R+A+KLL+I + +I++ G V+DLG APGSW QVA +G +
Sbjct: 17 DFFVKQAKKDGYRSRAAYKLLEISERDHILRPGMIVVDLGAAPGSWSQVASHKVG---NK 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G V+ +D+ + P + D R V+ L KH L Q +++SDM P
Sbjct: 74 GEVIAVDILDMSPLPGVKFIQSDFREEHA---VLELRKH----LGEHQP--DLVISDMSP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D A S+ L AL ++ EQ L
Sbjct: 125 NISGIVVSDQARSMYLAELALAFSM-------------------EQ-------------L 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GGN ++K+ + D ++ + F+ +PKA+R S E+YL+ G K
Sbjct: 153 NYGGNFLVKVFQGRDFEQFLCDMRAGFKSVLIRKPKASRDRSNELYLLGLGKK 205
>R7Q1M1_9EURY (tr|R7Q1M1) Ribosomal RNA large subunit methyltransferase E
OS=Methanoculleus sp. CAG:1088 GN=BN463_00886 PE=4 SV=1
Length = 228
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
++YYK A++ GY +R+++K++QI N+ G SV+DLG PG W QVA + +G
Sbjct: 15 EYYYKLAKKEGYRSRASYKIMQIDDRFNVFHDGDSVVDLGACPGGWSQVARERVGET--- 71
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++ +H V I D+ T ++ L V+LSDM P+++G
Sbjct: 72 GKVIGVDLRY-----IHPIDGVQFIIGDI-TDDNTMIKLLEMVGGKVDVVLSDMAPNIAG 125
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL A+D+ D+ +L+ GG
Sbjct: 126 HYSMDHARSIELCRYAVDVC-------------------------------DR-ILKKGG 153
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
L++K+ + + + F K P+A+RP+S E+Y+I +G
Sbjct: 154 CLVMKVFMGDMFYTLQTQLEKRFGKVIVHSPQASRPTSSEVYVISKGF 201
>B8KN15_9GAMM (tr|B8KN15) Ribosomal RNA large subunit methyltransferase E
OS=gamma proteobacterium NOR5-3 GN=rrmJ PE=3 SV=1
Length = 212
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y ++AQR GY +R+ +KLL++Q+ +I+ G ++LDLG APG W QVA +G
Sbjct: 18 DPYVQQAQRDGYRSRACYKLLELQERERLIRPGMTILDLGSAPGGWSQVAAALVG---DH 74
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ D+ P+ + V + D + + + K +++SDM P++SG
Sbjct: 75 GQVIASDIL-----PMDSIAGVDFVEGDFTENAVFERILTTLNGKPADLVISDMAPNMSG 129
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V+ D S+ L ALD+A VL GG
Sbjct: 130 VSAVDQPKSIYLVELALDMAC--------------------------------RVLAPGG 157
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
+ K+ + E E+ + + F K +P A+RP SRE+YL+ +G
Sbjct: 158 VFVTKVFQGEGFDELFKATREQFDKVLTRKPTASRPRSREVYLVARG 204
>L8DBM8_9GAMM (tr|L8DBM8) Ribosomal RNA large subunit methyltransferase E
OS=Pseudoalteromonas luteoviolacea B = ATCC 29581
GN=rlmE PE=3 SV=1
Length = 209
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y EAQR GY +R+ FKL +IQ+ +IKSG +V+DLG APGSW Q + LG
Sbjct: 20 DPYVHEAQRRGYRSRAVFKLEEIQEKDKLIKSGMNVVDLGAAPGSWSQYLAEQLG---ER 76
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPK--QKGFSVILSDMCPSV 125
G V+ D + P+ + V + D + L AL + K V+ SDM P++
Sbjct: 77 GEVIACD-----ILPMDPLAGVAFLQGDFR--EEAVLNALLKRIDGKNIDVVFSDMAPNM 129
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG + D A S+ L ALD+ VL+
Sbjct: 130 SGNMSIDQAGSMYLVELALDMC--------------------------------HQVLKK 157
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G +K+ + E + Q + F+ +PKA+RP SRE+Y++ G K
Sbjct: 158 DGAFAVKVFQGEGFDQFVQNVRDCFKTVKIRKPKASRPRSREVYVVATGYK 208
>K7Z995_BDEBC (tr|K7Z995) Ribosomal RNA large subunit methyltransferase E
OS=Bdellovibrio bacteriovorus str. Tiberius GN=ftsJ PE=3
SV=1
Length = 196
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+++A++ + ARS FKL +I + + K G VLDLG +PGSW Q A + G
Sbjct: 7 DHYFRKAKQENFAARSVFKLEEIDQKFKMFKPGQVVLDLGASPGSWSQYASKMAG---ER 63
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G VLG+D+ V V + I AD+ L+ + F +++SDM P +G
Sbjct: 64 GRVLGVDLSPVTVKLKNA----VFIQADLRDLNLEDIFKEHGFVPPFDIVMSDMAPKTTG 119
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+EL ALD+A + L+ G
Sbjct: 120 IRMTDQARSMELCELALDVA--------------------------------RRFLKKDG 147
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
+ + KL S+D ++ K F K ++P +TR S+EI+L+
Sbjct: 148 HFVCKLFHSDDFGKLRDEMKKTFAKVEAVKPDSTRKISKEIFLV 191
>D6Z2Y2_DESAT (tr|D6Z2Y2) Ribosomal RNA large subunit methyltransferase E
OS=Desulfurivibrio alkaliphilus (strain DSM 19089 /
UNIQEM U267 / AHT2) GN=rlmE PE=3 SV=1
Length = 197
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 40/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFY+++A++ GY ARS +KL + Q+ +++ G VLDLGC PGSW A + +G
Sbjct: 6 DFYFRKARKEGYPARSVYKLEEAQQKFKLLRPGDKVLDLGCQPGSWSIYAARVVG---RQ 62
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+ + + H + D+ S + ++R + + + V++SDM P +
Sbjct: 63 GLVVGVDITAGPI-KTRGGAPFHFVLGDITRESVQEKVRGICSR---YRVLISDMAPRTT 118
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D S+ L L+LA L+ G
Sbjct: 119 GNRWADQQQSLRLARTVLELAANW--------------------------------LQPG 146
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+L K+ E ED +E+ + F K +PK++R SRE++L+ K
Sbjct: 147 GHLYCKVFEGEDFQELVADVRRSFGKVKVFKPKSSRTESREVFLLAMDYK 196
>B6JWE6_SCHJY (tr|B6JWE6) AdoMet-dependent rRNA methyltransferase spb1
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=SJAG_00722 PE=3 SV=1
Length = 795
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 40/238 (16%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
A G D +YK A+ GY +R+AFKL+Q+ K N ++ V+DL APG WLQVA ++
Sbjct: 9 AKGRLDKWYKLAKEQGYRSRAAFKLVQLNKKYNFLEKARVVIDLCAAPGGWLQVASKTCK 68
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMC 122
P G ++G+D+ +K P +C + V I +D + QLR K V++ D
Sbjct: 69 P---GSLIVGVDLAPIK-PIPNCITFVEDITSD---RCRSQLRGYLKTWKA-DVVVHDGA 120
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P+V +DA EL + A+ LA
Sbjct: 121 PNVGAAWLQDAYGQAELVLMAMKLAC--------------------------------EF 148
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
L GG + K+ S+D + + K LF K +P ++R S EI+++C+G K K
Sbjct: 149 LGPGGTFVTKVFRSKDYNNLIWVFKQLFNKVEATKPPSSRNVSAEIFVVCRGYKAPHK 206
>F2NI71_DESAR (tr|F2NI71) Ribosomal RNA large subunit methyltransferase E
OS=Desulfobacca acetoxidans (strain ATCC 700848 / DSM
11109 / ASRB2) GN=rlmE PE=3 SV=1
Length = 204
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 41/225 (18%)
Query: 7 PDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQH 66
PD+Y + A++ + +R+ +KL I + + K G VLDLGCAPGSWLQ +GP
Sbjct: 8 PDYYSRRARQESFASRAVYKLADIDRKFQLFKPGQCVLDLGCAPGSWLQYISSRIGP--- 64
Query: 67 GGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D + ++ + + + + DV L L S F V++SD+ PS S
Sbjct: 65 QGLVVGLDRQALR---ISSNPSIRFVQVDVAALDPGSLIRFS---ASFDVVVSDLAPSTS 118
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D S++L + + A +L
Sbjct: 119 GIKDVDHQRSLDLARLSWEYA--------------------------------NRLLTAA 146
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
G+ ++K+ + D +Q K F++ L+P +R SRE+YL+
Sbjct: 147 GHYLVKVFQGPDFPPFAQEIKQHFQQVDILKPSGSRSESRELYLL 191
>I3Y7K6_THIV6 (tr|I3Y7K6) Ribosomal RNA large subunit methyltransferase E
OS=Thiocystis violascens (strain ATCC 17096 / DSM 198 /
6111) GN=rlmE PE=3 SV=1
Length = 212
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 48/232 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K +QR GY +R+A+KLL+IQ+ I+ G+ VLDLG APGSW Q+A + +GP
Sbjct: 18 DPYVKRSQREGYRSRAAYKLLEIQEKDRILTPGTRVLDLGAAPGSWSQIASRLVGP---K 74
Query: 68 GSVLGIDVKKVK----VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G V+ +D+ ++ V + D R ++ + QLR + + ++LSDM P
Sbjct: 75 GQVIALDLLPMEALDGVVFLQGDFREDSVLS--------QLRE-AIGAEPLDLVLSDMAP 125
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+++G D + V L ALDLA + L
Sbjct: 126 NITGTVVTDQSRVVYLLELALDLA--------------------------------RECL 153
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
+ GG+L++K + E + F + + +P+++R SREIYL+ +G
Sbjct: 154 KPGGSLVVKAFQGEGFDAYLLELRRSFHRVASRKPQSSRAQSREIYLVAKGF 205
>I1XMQ6_METNJ (tr|I1XMQ6) Ribosomal RNA large subunit methyltransferase E
OS=Methylophaga sp. (strain JAM1) GN=rlmE PE=3 SV=1
Length = 205
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 44/231 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+ FKL +I + +I++G SV+DLG APG W A +G
Sbjct: 17 DPYVKKAQQKGYRSRATFKLEEIDQKDKLIRNGMSVVDLGSAPGGWSDYALHRVGD---K 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSV--ILSDMCPSV 125
G V+ +D + P+ + VH I D H L L+ G S+ +LSDM P++
Sbjct: 74 GKVIALD-----ILPMTPLTGVHFIEGDFR--EDHVLEQLNEVLAGQSIDLVLSDMAPNM 126
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
+GV D S+ L ALD A+ L
Sbjct: 127 TGVGAIDQPGSMYLVELALDFAINN--------------------------------LSK 154
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
G+ ++K+ + E E + + F K +P A+R SRE+YL+ +GLK
Sbjct: 155 QGDFLVKVFQGEGFDEFLKFMRAHFNKVITRKPDASRARSREVYLLGRGLK 205
>E3FIB6_STIAD (tr|E3FIB6) Ribosomal RNA large subunit methyltransferase E
OS=Stigmatella aurantiaca (strain DW4/3-1) GN=rrmJ PE=3
SV=1
Length = 215
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 41/230 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+++A++ G ARSAFK+ +I + ++K G VLDLG APG +LQ+ ++G
Sbjct: 16 DHYFQKAKQEGLRARSAFKVDEILRRFPVVKKGGVVLDLGAAPGGFLQILADTVG---LS 72
Query: 68 GSVLGIDVKKVK-VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
G V+G+D+ ++ P H + V + AD +LRAL + ++SDM P S
Sbjct: 73 GRVIGVDIVAIRPFPQKHVTTAVLDVLADDF---DARLRALY--EGPLDAVISDMAPKTS 127
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D A S+ L +AL++AV ++G R G
Sbjct: 128 GIKATDEARSLRLAGKALEVAV------------------------------ERG--RPG 155
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ + KL D + + + + +RP+ATR +S E+YL+ LK
Sbjct: 156 SSFVAKLFMGGDFEAFRDQVRASYDEVKVVRPEATRGASMEVYLVGLRLK 205
>D7E8N8_METEZ (tr|D7E8N8) Ribosomal RNA large subunit methyltransferase E
OS=Methanohalobium evestigatum (strain DSM 3721 / OCM
161 / Z-7303) GN=rlmE PE=3 SV=1
Length = 255
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 44/225 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +Y+ A+ GY +R+A+KLLQI N+I+ +++DLG APG WLQVA +
Sbjct: 6 DSFYRLAKDEGYRSRAAYKLLQINNRFNVIEKNDTIVDLGAAPGGWLQVARKI-----SN 60
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRAL-SPKQKGFSVILSDMCPSVS 126
V+GID++++K V T+ D MT + + L + + +G V++SD P++S
Sbjct: 61 NKVVGIDLQRIK-----SIEGVETVKGD-MTSDRTVRKILKTIEDEGVDVVISDAAPNLS 114
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G D A S++L AL+ A K VL+
Sbjct: 115 GNWNLDHARSIDLVESALEFA--------------------------------KQVLKPS 142
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
GN ++K+ + + + + K F PKA+R S EIY+I
Sbjct: 143 GNFVVKVFQGDMFNDFLEKVKNNFAYVKAHEPKASRSQSAEIYVI 187
>G4TLZ7_PIRID (tr|G4TLZ7) Probable SPB1-required for ribosome synthesis, putative
methylase OS=Piriformospora indica (strain DSM 11827)
GN=PIIN_06274 PE=3 SV=1
Length = 1111
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G D +YK A+ GY ARSAFKL+Q+ K N ++S +DL APG WLQVA + + P
Sbjct: 11 GRLDKFYKLAKEQGYRARSAFKLIQLNKKYNFLESARCCIDLCAAPGGWLQVASKYMPP- 69
Query: 65 QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPS 124
++G+D+ +K P RV T AAD+ T + L K V+L D P+
Sbjct: 70 --NSIIVGVDLVPIKPIP-----RVTTFAADITTSNCRSLLRGELKDWKADVVLHDGAPN 122
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
V +DA EL + +L LAV L
Sbjct: 123 VGTAWIQDAYSQAELVLMSLRLAV--------------------------------EFLI 150
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
GG + K+ S D + + + LF K +P A+R S EI+++C+
Sbjct: 151 KGGTFVTKVFRSTDYNNLIWVFQQLFAKVEATKPPASRNVSAEIFVVCR 199
>D8MB46_BLAHO (tr|D8MB46) Singapore isolate B (sub-type 7) whole genome shotgun
sequence assembly, scaffold_8 OS=Blastocystis hominis
GN=GSBLH_T00004897001 PE=3 SV=1
Length = 840
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +Y A++ GY ARSAFKL+Q+ + N + ++DL APG W QVA + + P++
Sbjct: 10 DKWYALAKQQGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQM-PIE-- 66
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
+++G+D+ +K P+H V T D+ TLS + K V+L D P+V G
Sbjct: 67 STIIGVDLLPIK--PIH---NVKTFQEDITTLSCRDVIKRELHGKHADVVLHDGAPNVGG 121
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+KDA L + +L LAV + G
Sbjct: 122 GWSKDAFDQNSLVLHSLRLAV--------------------------------EFMTKGA 149
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ K+ S D + I LF K +P A+R S EI+++CQ K
Sbjct: 150 TFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTESAEIFVVCQNYK 198
>A0Z551_9GAMM (tr|A0Z551) Ribosomal RNA large subunit methyltransferase E
OS=marine gamma proteobacterium HTCC2080 GN=rlmE PE=3
SV=1
Length = 208
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + A + GY +R+ +KL +I +IK G +VLDLG APG W QVA + +G
Sbjct: 18 DLYVQRAVKEGYRSRACYKLKEINDRDRVIKPGMTVLDLGAAPGGWSQVAVEMVGAR--- 74
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ D + P+ + V I D + + + V+LSDM P++SG
Sbjct: 75 GRVIASD-----ILPMDSLADVEFILGDFTEEAVFEALLNLLGESAVDVVLSDMAPNMSG 129
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V+ D S+ L ALDLA L GG
Sbjct: 130 VSAVDQPRSMYLVELALDLAT--------------------------------QTLEKGG 157
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L+ K+ + E + + + F + +P+A+RP SRE+YL+ G K
Sbjct: 158 TLVSKVFQGEGFEAVMSTARQNFDRVLTRKPEASRPRSREVYLVASGFK 206
>F9UBY5_9GAMM (tr|F9UBY5) Ribosomal RNA large subunit methyltransferase E
OS=Thiocapsa marina 5811 GN=rlmE PE=3 SV=1
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 40/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQR GY +R+A+KLL+IQ+ I + G VLDLG APGSW Q+A + +G
Sbjct: 17 DPYVKRAQREGYRSRAAYKLLEIQEKDRIFRPGMRVLDLGAAPGSWSQIAARLVGA---R 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
GSV+ +D+ P+ + V + D + + ++LSDM P+++G
Sbjct: 74 GSVVALDLL-----PMDPLAGVVVMQGDFREPEILDRLCATLGGESLDLVLSDMAPNITG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+T D S+ L ALDLA + L+ GG
Sbjct: 129 MTVVDQPRSMYLVELALDLA--------------------------------RSRLQPGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
L++K+ + +I + F K +PK++R SRE+YL+ +G
Sbjct: 157 ALVVKVFQGTGFDDILTELRRSFAKVVSRKPKSSRSQSRELYLVAKGF 204
>K2RRP1_METFO (tr|K2RRP1) Ribosomal RNA large subunit methyltransferase E
OS=Methanobacterium formicicum DSM 3637 GN=rrmJ PE=3
SV=1
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 45/234 (19%)
Query: 10 YYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGS 69
YYK+A++ Y +R++FKLLQ+ + IIK G SV+DLG APG W QVA ++ G G
Sbjct: 13 YYKKAKQQDYRSRASFKLLQLNRKYKIIKKGDSVVDLGAAPGGWSQVALEATG---EDGL 69
Query: 70 VLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
V+ +D+ ++K P + +I D TL + + R L K + VI+SD P +S
Sbjct: 70 VVAVDLNRIKSFP---EENFWSIKGDFTHEETLDEIR-RTLQGKAQ---VIISDAAPKLS 122
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D S++L L ++ +L+
Sbjct: 123 GIKDLDQLRSIDLARTVLQIS--------------------------------DSILKYK 150
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
GN+I+K+ + E E+ + K F+ +P ++R S E+Y++ +G + K
Sbjct: 151 GNMIMKVFQGEGYPELLKEVKQNFQTVRTTKPPSSRKKSGEMYVVGRGYRRAGK 204
>L9PSM0_9BURK (tr|L9PSM0) Ribosomal RNA large subunit methyltransferase E
OS=Janthinobacterium sp. HH01 GN=rlmE PE=3 SV=1
Length = 233
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 40/232 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQ+ GY AR+AFKL +I + N+IK G ++DLGC PGSW Q A + L + G
Sbjct: 17 DPYVKLAQKEGYRARAAFKLKEIDEDENLIKPGQVIVDLGCTPGSWGQYARRKLAGKEGG 76
Query: 68 ---GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPS 124
G+++G+D+ P+ + H I D QL K + ++LSDM P+
Sbjct: 77 GINGTLIGLDLL-----PMEPIADFHFIQGDFREPEVLQLLEDHVKGQKVDLVLSDMAPN 131
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
+SG+ DAA L +DLA I Q+ P+GS
Sbjct: 132 LSGIPDSDAARMEHL----IDLA-----------------IEFSQAHLKPTGS------- 163
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L++K + +I + F+ +PKA+R S EI+L+ +GLK
Sbjct: 164 ----LLVKCFKDMGFNDIVLKFRREFKTVIQKKPKASRDKSSEIFLLGRGLK 211
>M7WQD5_RHOTO (tr|M7WQD5) AdoMet-dependent rRNA methyltransferase spb1
OS=Rhodosporidium toruloides NP11 GN=RHTO_03482 PE=4
SV=1
Length = 936
Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 111/238 (46%), Gaps = 43/238 (18%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G D +Y+ A+ GY ARSAFKL+Q+ + + + S V+DL APG WLQVA + + P
Sbjct: 11 GRLDKWYQLAKEQGYRARSAFKLVQLNRKYDFLASARCVIDLCAAPGGWLQVAAKQM-PA 69
Query: 65 QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFS--VILSDMC 122
Q+ ++G+D+ +K P R T+ D+ T S RAL + K + V+L D
Sbjct: 70 QN-SIIIGVDLVPIKPIP-----RCVTLVEDITTESCR--RALRAEMKDWKADVVLHDGA 121
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P+V +DA VEL + +L LAV
Sbjct: 122 PNVGSAWVQDAFTQVELVLASLKLAV--------------------------------EF 149
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
LR GG K+ S+D + + LF K +P ++R S EI+++CQG AK
Sbjct: 150 LRPGGTFCTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGYLAPAK 207
>C8PXU6_9GAMM (tr|C8PXU6) Ribosomal RNA large subunit methyltransferase E
OS=Enhydrobacter aerosaccus SK60 GN=rrmJ PE=3 SV=1
Length = 210
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 48/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQR GY AR+A+KLL+I + +IK G +V+DLG APGSW QVA + +G
Sbjct: 24 DHYVKLAQRDGYRARAAYKLLEINEKLQLIKKGMTVVDLGSAPGSWSQVAGKLVG---DT 80
Query: 68 GSVLGIDVKKV----KVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G ++ D+ + V + D R + ++M K V+LSDM P
Sbjct: 81 GKLIASDILPMDTLENVTFIQGDFREQAVFDNIMA---------EVADKKVEVVLSDMAP 131
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+ SG + D + L A+D A EQ VL
Sbjct: 132 NTSGFSAVDQPRMIYLCELAMDFA--------------------EQ------------VL 159
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLIC 232
GG L+IK+ + E S + + + F K ++P A+R S+E+Y I
Sbjct: 160 PEGGTLVIKVFQGEGSDALRKNMQQRFSKVRSIKPAASRARSKEMYWIA 208
>D2ZMV8_METSM (tr|D2ZMV8) Ribosomal RNA large subunit methyltransferase E
OS=Methanobrevibacter smithii DSM 2374 GN=rlmE PE=3 SV=1
Length = 207
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 39/230 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YYK+A++ Y +R+++K+ Q+ K +IK G +V+DLG APG W QVA + +G
Sbjct: 12 DPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALEKVG---EE 68
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D+ ++K P + H I D T ++ Q + ++ V++SD PS+ G
Sbjct: 69 GLVIGVDLNRIKPFP---EENFHGIRGD-FTTTEVQEKVMNLIGGKAKVVISDASPSLCG 124
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D S++L + +A +L G
Sbjct: 125 IKNIDQLRSIDLTNTVIGIA--------------------------------DNILEPKG 152
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKP 237
NL++K+ + + K++ K +R+ +P ++R S E+Y++ KP
Sbjct: 153 NLVMKVFQGPEYKDMLTRLKKKYRQVKTTKPPSSRKKSSEMYVVGLDFKP 202
>D1JE10_9ARCH (tr|D1JE10) Ribosomal RNA large subunit methyltransferase E
OS=uncultured archaeon GN=rrmJ PE=3 SV=1
Length = 204
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 46/232 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D +YK A+ LGY +RSAFKLLQI +I++G VLDLG APG W QVA G +
Sbjct: 10 DRFYKSAKELGYRSRSAFKLLQINTKFGLIRAGDVVLDLGAAPGGWSQVA---YGLVGDS 66
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSP--KQKGFSV---ILSDMC 122
G VL +D++ P+ + + + D+ + L A+ +KG + ++SD+
Sbjct: 67 GLVLSVDLQ-----PMENIADIVILKRDIAK-EQETLAAIKAVLNRKGHELVDAVISDLS 120
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P +SG D S EL AL++A +
Sbjct: 121 PQLSGTRDYDQFRSSELSTSALNIA--------------------------------SAL 148
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
LR GN + K+ + E + K FR + P A+R S E+Y+I +G
Sbjct: 149 LRNNGNFVAKIFQGAYYNEFYKCVKAKFRYTRAHSPAASRKGSAEMYVIGKG 200
>G8QQW6_SPHPG (tr|G8QQW6) Ribosomal RNA large subunit methyltransferase E
(Precursor) OS=Sphaerochaeta pleomorpha (strain ATCC
BAA-1885 / DSM 22778 / Grapes) GN=rlmE PE=3 SV=1
Length = 201
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K A + GY ARS +KL +IQ ++K G SVLD+G APGSW + L L+
Sbjct: 10 DSYTKRAHKEGYPARSVYKLEEIQNTFKLVKPGDSVLDVGAAPGSWTLFTHRVL--LKEQ 67
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G ++ +D+ + + P+ HT+ A V +R+ + + VI+SD+ P G
Sbjct: 68 GKIIAVDLNPLNLNPIP-----HTVTAFVGDAFSKDIRSKLVENGPYDVIISDVAPMTMG 122
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D + S L + + Y+ E L+V G
Sbjct: 123 NRSVDTSRSEYLASQVI-------------------YLASEH-------------LKVHG 150
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
NL++K+ + E+ Q + +F K +PKA R S EIYL+
Sbjct: 151 NLVVKVFQGGGQVELIQTMRSMFAKVKPFKPKACRDDSFEIYLV 194
>K1YVP7_9BACT (tr|K1YVP7) Ribosomal RNA large subunit methyltransferase E
OS=uncultured bacterium (gcode 4) GN=rlmE PE=3 SV=1
Length = 305
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 107/271 (39%), Gaps = 80/271 (29%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ EA+RLGY ARSAFKLL IQ+ NII++G VLD+ APGSWLQV + +GP
Sbjct: 72 DDYFYEAKRLGYRARSAFKLLDIQEKYNIIRTGMKVLDIASAPGSWLQVLAKMVGPT--- 128
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSK--------HQLRALSPKQKGFS---- 115
G + G+D++K++ VH DV H + S K+ +
Sbjct: 129 GIIAGVDIQKIEGLGYQ---NVHVFQGDVFVTEPIIEFLKGIHDNKETSQKRSNLNEEWV 185
Query: 116 ------------------------------VILSDMCPSVSGVTTKDAALSVELGMRALD 145
I SD+ +G T D SVEL + LD
Sbjct: 186 PKWGVQKKYDEWGTEWWVQRTIFSEVYKMDCITSDIAAHTTGQTGVDQYRSVELNLAILD 245
Query: 146 LAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGGNLIIKLLESEDSKEISQI 205
+A LR G L++K+ ED ++
Sbjct: 246 IA--------------------------------DIFLRKWGTLVLKVFVGEDIDDLIGP 273
Query: 206 CKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
K + +PKA R S E Y +CQG K
Sbjct: 274 IKARYTVLHKCKPKACRERSFEEYFVCQGKK 304
>M5FW47_DACSP (tr|M5FW47) FtsJ-domain-containing protein OS=Dacryopinax sp.
(strain DJM 731) GN=DACRYDRAFT_117511 PE=4 SV=1
Length = 881
Score = 93.6 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G D YYK A+ GY ARSAFKL+Q+ K N ++S +DL APG WLQVA + + P+
Sbjct: 11 GRLDKYYKLAKEQGYRARSAFKLIQLNKKYNFLESAKCCIDLCAAPGGWLQVASKYM-PV 69
Query: 65 QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPS 124
++G+D+ +K P RV T AAD+ T L S K V+L D P+
Sbjct: 70 N--SVIVGVDLVPIKAIP-----RVITHAADITTPRCRTLLRESLKDWQADVVLHDGAPN 122
Query: 125 VSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLR 184
V +DA EL + +L LAV L
Sbjct: 123 VGTAWVQDAYTQSELVLMSLKLAV--------------------------------EFLI 150
Query: 185 VGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
GG + K+ S D + + LF + +P ++R S EI+++C+ AK
Sbjct: 151 KGGTFVTKVFRSADYNNLLWVFNQLFGRVEATKPPSSRNVSAEIFVVCRDFLAPAK 206
>D3E1N3_METRM (tr|D3E1N3) Ribosomal RNA large subunit methyltransferase E
OS=Methanobrevibacter ruminantium (strain ATCC 35063 /
DSM 1093 / JCM 13430 / M1) GN=rrmJ PE=3 SV=1
Length = 213
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 51/235 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY+ A+ Y +R+++KL Q+ K IIK G++V+DLG APG W QVA + +G
Sbjct: 12 DPYYRRAKSEEYRSRASYKLKQLDKKYKIIKEGNTVVDLGAAPGGWSQVALEKVG---EE 68
Query: 68 GSVLGIDVKKVKVPP------VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDM 121
G V+G+D+ ++K P + D + +M L+ + + V++SD
Sbjct: 69 GIVVGVDLNRIKPFPEKNFYGIRGDFTKEIVQDKIMELTNGKAK----------VLISDA 118
Query: 122 CPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKG 181
PS++G+ T D SV+L + +A
Sbjct: 119 APSLTGIKTIDHLNSVDLVETVIKIA--------------------------------DN 146
Query: 182 VLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+L GN++IK + + K + K FRK +P ++R S+E+Y++ G +
Sbjct: 147 ILETEGNMVIKAFQGPEYKRLLDEIKQDFRKVKSTKPPSSRHRSKEMYIVGLGYR 201
>D1YZT5_METPS (tr|D1YZT5) Ribosomal RNA large subunit methyltransferase E
OS=Methanocella paludicola (strain DSM 17711 / JCM 13418
/ NBRC 101707 / SANAE) GN=rrmJ PE=3 SV=1
Length = 254
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 46/229 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DFYY +A+++GY +R+AFKL I + +IK G +V+DLG APG WLQVA +
Sbjct: 7 DFYYNKAKQMGYRSRAAFKLKFINEKFGLIKKGDAVVDLGAAPGGWLQVAKEI-----SE 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+G+D+++++ PV TI D MT + Q + +K + ++ D P++SG
Sbjct: 62 GTVIGVDLQRIE--PVEG---AVTIKGD-MTSPETQAKIFEKVEK-VNAVICDAAPNLSG 114
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D A S++L ALD+A +L GG
Sbjct: 115 NWALDHARSIDLSKTALDVAA--------------------------------KILAPGG 142
Query: 188 NLIIKLLESEDSKE-ISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
N ++K+ + + + + ++ + R ++ P A+R S EIY+I +G
Sbjct: 143 NFLVKVFQGDLYQGFVDEVGRRFSRVYTYKSP-ASRQQSAEIYVIGKGF 190
>L0KTW2_METHD (tr|L0KTW2) Ribosomal RNA large subunit methyltransferase E
OS=Methanomethylovorans hollandica (strain DSM 15978 /
NBRC 107637 / DMS1) GN=rlmE PE=3 SV=1
Length = 256
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 42/226 (18%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A+ GY +R+AFKLLQI + ++IK G +V+DLG APG W +VA + G
Sbjct: 7 DTYYWRAKEEGYRSRAAFKLLQINEKFSVIKEGDTVVDLGAAPGGWSEVAKK-----LSG 61
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+G+D++ ++ P+ V TI D+ + + + + G V++ D P++SG
Sbjct: 62 GRVIGVDLQ--RISPIEG---VETIKGDITSDATIKKIFELVGEGGVDVVICDAAPNLSG 116
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S++L AL A+ +L+ GG
Sbjct: 117 NWSYDHARSIDLSRSALGCAI--------------------------------KILKPGG 144
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
+ ++K+ + + K + + F + P A+R S EIY+I +
Sbjct: 145 HFVVKVFQGDMFKGFLEEARTDFVHTKSFSPVASRSQSAEIYIIAK 190
>L7UA33_MYXSD (tr|L7UA33) Ribosomal RNA large subunit methyltransferase E
OS=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 /
Mx s8) GN=rlmE PE=3 SV=1
Length = 208
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 47/228 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+++A++ G ARSAFK+ ++ K ++K G VLDLG APG +LQ+ ++G
Sbjct: 9 DHYFQKAKQEGLRARSAFKVDELIKRFPMVKKGHVVLDLGAAPGGFLQILADAVG---GA 65
Query: 68 GSVLGIDVKKVKVPPV---HCDSRVHTIAADVMTLSKHQLRALSPKQKG-FSVILSDMCP 123
G V+G+D+ V + P H + V + AD L+ G F ++SDM P
Sbjct: 66 GRVIGVDI--VAIRPFTQRHVQTAVFDVLADDFDAK------LAAMYDGPFDAVISDMAP 117
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
SG+ D A S+ L +AL++A +G
Sbjct: 118 KTSGIKATDEARSLRLAGKALEVA------------------------------SKRG-- 145
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLI 231
R G + + K+ D ++ + LF + +RP+ATR +S E+YL+
Sbjct: 146 RAGSSFVAKVFMGGDFEDFRNQVRALFEEVKVVRPEATRGASMEVYLV 193
>M2Y4K0_GALSU (tr|M2Y4K0) FtsJ-like methyltransferase family protein OS=Galdieria
sulphuraria GN=Gasu_20080 PE=3 SV=1
Length = 299
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY++A+ GY ARSA+KLLQ+ + N+ K +V+DL APGSW QV + L L+ G
Sbjct: 10 DIYYRKAKEEGYRARSAYKLLQLDQEFNLFKDAENVVDLCAAPGSWSQVVSKRLRELRKG 69
Query: 68 -GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVS 126
+++ +D++ ++ P+ V I D+ + + + V+LSD P V+
Sbjct: 70 QATIVAVDLQ--EIAPIEG---VTVIQGDITSRPTVETILKEFENGMVDVVLSDGAPDVT 124
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D + EL + AL++A +LR G
Sbjct: 125 GLHDLDEYIQSELILSALNVAT--------------------------------FLLRQG 152
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
G + K+ +D+ + F + +P+++R SS E + +C+G
Sbjct: 153 GTFVAKVFRGKDTCGVFSRLSVFFENVTLAKPRSSRNSSIEAFFVCRG 200
>F5R828_9RHOO (tr|F5R828) Ribosomal RNA large subunit methyltransferase E
OS=Methyloversatilis universalis FAM5 GN=rlmE PE=3 SV=1
Length = 210
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ G+ +R+AFKL+QI ++ G V+DLG PG W QV+ + +G
Sbjct: 17 DPYVKQAQAQGFRSRAAFKLMQIDDKDRLLAPGKVVVDLGSTPGGWSQVSSKKVGA---S 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ ID+ + + PVH V I D S + + ++LSDM P++SG
Sbjct: 74 GKVVAIDL--LPMEPVHG---VRFILGDFREDGPLGELVESLEGRRVDLVLSDMAPNLSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D A S+ L L+LA+ + RE L+ GG
Sbjct: 129 IAVTDQARSIHL----LELAL--------------EFAREH--------------LKSGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
++++K+ + E+ + + LF + +P ++R S E+YL+C+G +
Sbjct: 157 DMLVKVFQGSGFDELRREMEQLFTSVAVRKPDSSRDRSAEVYLLCRGRR 205
>E3GY92_METFV (tr|E3GY92) Ribosomal RNA large subunit methyltransferase E
OS=Methanothermus fervidus (strain ATCC 43054 / DSM 2088
/ JCM 10308 / V24 S) GN=rlmE PE=3 SV=1
Length = 203
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 39/226 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D+YY+ A++ Y +R+A+KL+Q+ K +I+ G+ VLDLG APG W QVA + +G
Sbjct: 12 DYYYRLAKKEKYYSRAAYKLIQLNKKFKLIRRGNVVLDLGAAPGGWSQVAIKLVGS---K 68
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ +D+KK+K P+ ++ I D T K Q + + G VI+SD PS+SG
Sbjct: 69 GKVVAVDIKKMK--PLKYEN-FSFIQGD-FTDPKIQKKIKEITEGGVDVIISDASPSLSG 124
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
+ D S+EL +++A K VL+ GG
Sbjct: 125 IKDLDHIRSIELCKSVINIA--------------------------------KNVLKRGG 152
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQ 233
NL++K+ + + K + K F+ +P ++ SS EIY++ +
Sbjct: 153 NLVVKVFQGPEFKNLLDELKNEFKYVKASKPPSSEKSSAEIYVVAK 198
>C7P1D9_HALMD (tr|C7P1D9) Ribosomal RNA large subunit methyltransferase E
OS=Halomicrobium mukohataei (strain ATCC 700874 / DSM
12286 / JCM 9738 / NCIMB 13541) GN=rlmE PE=3 SV=1
Length = 262
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 40/232 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D YY A++ GY ARSA+KL Q+ + + ++ +VLDLG APG W+QVA + +G
Sbjct: 5 DDYYNRAKQEGYRARSAYKLQQLDETAGLLGQNRTVLDLGAAPGGWMQVAAERVGTGGVV 64
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLS-KHQLRAL---SPKQKGFSVILSDMCP 123
V + + P D V TI D+ S K ++R + ++ V++SD+ P
Sbjct: 65 IGVDRQRIDDLDDP----DPTVETIRGDMTDESTKEEVRDVVGAEGDERPVDVVISDLAP 120
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+++G D A S+ L +A +A + VL
Sbjct: 121 NMTGQYDLDHARSIHLARQAFAVA--------------------------------EDVL 148
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GG+ +K+ + +D ++ + F +RP A+R SS E+YL+ +G
Sbjct: 149 ATGGDFAVKVFDGQDLADLEADIESEFEYVRQVRPDASRDSSSELYLVAKGF 200
>F4DVW2_PSEMN (tr|F4DVW2) Ribosomal RNA large subunit methyltransferase E
OS=Pseudomonas mendocina (strain NK-01) GN=ftsJ, rrmJ
PE=3 SV=1
Length = 207
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K AQ+ GY +R+++KLL+IQ+ I++ G +V+DLG APG W QV + +G
Sbjct: 17 DPYVKMAQKDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGWSQVTSRVIG---DK 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G ++ D+ ++ P V I D + + + +++SDM P++SG
Sbjct: 74 GRLIASDILEMDAIP-----DVTFIQGDFTDDAVFTRLLEAIGENPVDLVISDMAPNMSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V T D A ++ L ALDLA VLR GG
Sbjct: 129 VRTADQARAMYLCELALDLA--------------------------------GRVLRPGG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ +IK+ + E + + F K +P ++R SRE YL+ +G +
Sbjct: 157 DFLIKIFQGEGFDAYHKQVRETFDKVQMRKPLSSRDRSREQYLLARGFR 205
>G7DT39_MIXOS (tr|G7DT39) Uncharacterized protein OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo00564 PE=3
SV=1
Length = 893
Score = 92.8 bits (229), Expect = 9e-17, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 42/232 (18%)
Query: 5 GAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL 64
G D +YK A+ GY ARSAFKL+QI K ++S +DL APG WLQVA +++ P
Sbjct: 11 GRLDKWYKLAKEQGYRARSAFKLIQINKKYQFLESARCCIDLCAAPGGWLQVASKAMPP- 69
Query: 65 QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMT-LSKHQLRALSPKQKGFSVILSDMCP 123
++GID+ V + P+ +R TIA D+ T + +RA K V+L D P
Sbjct: 70 --NSVIVGIDL--VAIKPI---ARCVTIAEDITTDACRRAIRAEVKDWKA-DVVLHDGAP 121
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
+V +DA EL + +L LA L
Sbjct: 122 NVGTAWIQDAFTQAELVLASLKLAT--------------------------------EFL 149
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
GG + K+ S D + + LF++ +P ++R S EI+++CQG
Sbjct: 150 APGGTFVTKVFRSSDYNSLMFVFNQLFKRVEATKPPSSRNVSAEIFVVCQGF 201
>K6TXS0_9EURY (tr|K6TXS0) Ribosomal RNA large subunit methyltransferase E
OS=Methanobacterium sp. Maddingley MBC34 GN=rlmE PE=3
SV=1
Length = 206
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 45/234 (19%)
Query: 10 YYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHGGS 69
YYK+A++ Y +R++FKLLQ+ + IIK G SV+DLG APG W QVA +++G G
Sbjct: 13 YYKKAKKQDYRSRASFKLLQLNRKYKIIKKGDSVIDLGAAPGGWSQVALEAVG---EDGL 69
Query: 70 VLGIDVKKVKVPPVHCDSRVHTIAADVM---TLSKHQLRALSPKQKGFSVILSDMCPSVS 126
V+ +D+ ++K P + +I D TL + + R L K + VI+SD P +S
Sbjct: 70 VVAVDLNRMKSFP---EENFWSIKGDFTHEETLDEIK-RTLQGKAQ---VIISDAAPKLS 122
Query: 127 GVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVG 186
G+ D +L + L ++ +L+
Sbjct: 123 GIKDLDQLRCTDLALTVLQIS--------------------------------DTILKYK 150
Query: 187 GNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
GN+I+K+ + E E+ K F+ +P ++R S E+Y++ +G + K
Sbjct: 151 GNIIMKVFQGEGYPELLAEVKTKFQTVKTTKPPSSRKKSGEMYVVGRGFRRAGK 204
>C4XIK2_DESMR (tr|C4XIK2) Ribosomal RNA large subunit methyltransferase E
OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM
13731 / RS-1) GN=rrmJ PE=3 SV=1
Length = 216
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y+ +A++ Y ARS +KL +I+K S ++ G++VLDLG PGSW A + +GP
Sbjct: 9 DHYFNKAKQDNYPARSVYKLEEIEKQSRLLTPGAAVLDLGACPGSWSLYAAKRVGP---S 65
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G VL +D+ V + D++ A + F V+LSDM P G
Sbjct: 66 GRVLAVDLNPAA---TAFPGNVTYLIGDMLEPGPDIAEAFE-RFGPFDVVLSDMAPKTIG 121
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
D A S+EL AL +AV L+ GG
Sbjct: 122 HKFTDQARSLELCEAALSVAVTR--------------------------------LKPGG 149
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGL 235
++K+ + DS + + F +PK++R S+EI+ + G
Sbjct: 150 AFVVKIFQGPDSPAFQKGLRQYFSAVRVAKPKSSRAESKEIFFVATGF 197
>F9ZF04_9PROT (tr|F9ZF04) Ribosomal RNA large subunit methyltransferase E
OS=Nitrosomonas sp. AL212 GN=rlmE PE=3 SV=1
Length = 205
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 110/233 (47%), Gaps = 48/233 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
DF+ K+A++ GY +R+A+KLL+I + I+K G +V+DLG APGSW QVA +G G
Sbjct: 17 DFFVKQAKKEGYRSRAAYKLLEITEKDQILKPGLTVVDLGAAPGSWSQVASHKIG---RG 73
Query: 68 GSVLGIDVKKVKVPP----VHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCP 123
G V+ +D+ ++ P + D R ++ L KH L Q +++SDM P
Sbjct: 74 GKVIAVDILEMAPLPGVEFIQGDFREEYA---IVELKKH----LGNDQ--LDLVISDMSP 124
Query: 124 SVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVL 183
++SG+ D A S+ L AL A+ L
Sbjct: 125 NMSGIVISDQARSMYLAELALAFALEQ--------------------------------L 152
Query: 184 RVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
GGN ++K+ + D + + F+ +PKA+R S E+YL+ G K
Sbjct: 153 NYGGNFLVKVFQGRDFDQFLFDMRAGFKNVIIRKPKASRDRSNELYLLGLGKK 205
>H0PW39_9RHOO (tr|H0PW39) Ribosomal RNA large subunit methyltransferase E
OS=Azoarcus sp. KH32C GN=ftsJ PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y + A+ GY +R+A+KL++I + +++K G V+DLG APGSW QVA + +G
Sbjct: 22 DAYVQRAKSEGYRSRAAYKLMEIDERDHLLKPGMVVVDLGAAPGSWCQVATRRVGA---A 78
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKG--FSVILSDMCPSV 125
G V +D+ PV + V I D L L + G ++LSDM P++
Sbjct: 79 GKVFALDLL-----PVEPMAGVDFIQGDFQ--DDAVLEELEARLAGQPVDIVLSDMAPNM 131
Query: 126 SGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRV 185
SG+ T D A S+ LG ALD + L++
Sbjct: 132 SGIDTADQARSIYLGELALDFSTRH--------------------------------LKI 159
Query: 186 GGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLKPDAK 240
GG+ +IK+ + E F +PKA+R S E+YL+ GL+ A+
Sbjct: 160 GGSFLIKVFQGAGFMEFRNEVARHFSTLQVRKPKASRDRSPEVYLL--GLRRKAE 212
>M7NZL1_9GAMM (tr|M7NZL1) Cell division protein FtsJ / Ribosomal RNA large
subunit methyltransferase J OS=Methylophaga lonarensis
MPL GN=MPL1_09075 PE=4 SV=1
Length = 205
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D Y K+AQ+ GY +R+ FKL +I + +I+ G +V+DLG APG W A +G
Sbjct: 17 DPYVKKAQQKGYRSRATFKLEEIDQKDKLIRPGMAVVDLGSAPGGWSDYALHKVGD---S 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G+V+ +D + P+ + VH I D Q K ++LSDM P++SG
Sbjct: 74 GTVVALD-----ILPMTPLTGVHFIEGDFREDEVLQQLETVLAGKQVDLVLSDMAPNMSG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
V T D A S+ L ALD A+ L G
Sbjct: 129 VGTVDQAGSMYLVELALDFALNH--------------------------------LSKQG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ ++K+ + E + F+K +P A+R SRE+YL+ +GLK
Sbjct: 157 DFLVKVFQGEGFDAYFAAMREHFKKVVTRKPDASRARSREVYLLGRGLK 205
>H8GR70_METAL (tr|H8GR70) Ribosomal RNA large subunit methyltransferase E
OS=Methylomicrobium album BG8 GN=rlmE PE=3 SV=1
Length = 205
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 50/234 (21%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG-PLQH 66
D Y K AQ+LGY +R+ FKL +IQ +I+K G ++DLG APG W Q A Q LG P Q
Sbjct: 17 DEYVKMAQKLGYRSRAVFKLKEIQDKDHILKPGMRIVDLGAAPGGWSQYAKQLLGNPCQ- 75
Query: 67 GGSVLGIDVKKVK----VPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMC 122
++ +D+ ++ V + D R + +M S + K +++SDM
Sbjct: 76 ---IIALDILAIEPIDGVEFIQGDFREQAVFDQLMQ---------SLEGKRVDLVMSDMA 123
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
P++SG D S+ LG AL++A + V
Sbjct: 124 PNMSGSKGVDQPRSLYLGELALEMA--------------------------------QSV 151
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L G ++KL + E + + + F K +PKA+R S E+YL+ +G K
Sbjct: 152 LAKDGAFLVKLFQGEGFENYCKQVQQSFSKVLIRKPKASRSRSNEVYLLARGFK 205
>M1T2T5_9PROT (tr|M1T2T5) Ribosomal RNA large subunit methyltransferase E OS=beta
proteobacterium CB GN=rlmE PE=3 SV=1
Length = 224
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 109/243 (44%), Gaps = 50/243 (20%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPL--- 64
D Y K AQ+ GY AR+ +KL +I + +IK+G +++DLG APGSW Q A L L
Sbjct: 17 DPYVKMAQKEGYRARAVYKLSEIDEQDRLIKAGMTIVDLGSAPGSWSQYARNRLTELGKN 76
Query: 65 -------QHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQ-LRALSPKQKGFSV 116
+ G+++ ID+ P+ + V I D + L AL P G V
Sbjct: 77 NPNIESGKPDGTIIAIDIL-----PMEDIADVSFIQGDFREDEGLKALEALLPADAGGKV 131
Query: 117 --ILSDMCPSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDP 174
++SDM P++SGV DAA L ALD +V
Sbjct: 132 DLVMSDMAPNLSGVGVADAARMAFLAEIALDFSVQH------------------------ 167
Query: 175 SGSDDKGVLRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQG 234
L+ G L+IK +I + K +F+ + +PKA+R S EI+L+ +
Sbjct: 168 --------LKPEGALLIKCFNGSGYSQIVESFKKVFKTVASRKPKASRAKSSEIFLLGRD 219
Query: 235 LKP 237
LKP
Sbjct: 220 LKP 222
>D9PUQ3_METTM (tr|D9PUQ3) Ribosomal RNA large subunit methyltransferase E
OS=Methanothermobacter marburgensis (strain DSM 2133 /
14651 / NBRC 100331 / OCM 82 / Marburg) GN=rlmE PE=3
SV=1
Length = 211
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 3 ASGAPDFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLG 62
A D YYK A+R Y +R+++KLLQ+ +I+ G VLDLG APG W QVA + +G
Sbjct: 7 AERKRDHYYKSAKRENYRSRASYKLLQLNNRYRLIRKGYRVLDLGAAPGGWSQVALEKVG 66
Query: 63 PLQHGGSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMC 122
G V+ +D++++K PV I D T + R + V++SD
Sbjct: 67 ---EEGLVVAVDLQRIKGFPVEN---FRAIMGD-FTDPAIKERIIEELGGRADVVISDAA 119
Query: 123 PSVSGVTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGV 182
PS+SG+ D SV+L LD+A V
Sbjct: 120 PSLSGIRDIDHLRSVDLVENVLDIAY--------------------------------RV 147
Query: 183 LRVGGNLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
L GN++IK + + ++ + K F K +P ++R +S E+Y++ + K
Sbjct: 148 LERKGNILIKAFQGPELDKVIKEMKKDFWKLKTTKPASSRKASAEMYIVGRDFK 201
>E4PGS0_MARAH (tr|E4PGS0) Ribosomal RNA large subunit methyltransferase E
OS=Marinobacter adhaerens (strain HP15) GN=rlmE PE=3
SV=1
Length = 206
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 8 DFYYKEAQRLGYVARSAFKLLQIQKHSNIIKSGSSVLDLGCAPGSWLQVACQSLGPLQHG 67
D + K+AQ GY +R+++KLL+I K +I V+DLG APG W QVA + +G H
Sbjct: 17 DPFVKQAQVDGYRSRASYKLLEINKKDRLIHPNMVVVDLGSAPGGWSQVAAKLVG---HK 73
Query: 68 GSVLGIDVKKVKVPPVHCDSRVHTIAADVMTLSKHQLRALSPKQKGFSVILSDMCPSVSG 127
G V+ D+ P+ + V I D + + V++SDM P++SG
Sbjct: 74 GRVIASDIL-----PMDAIAGVDFIQGDFTENDVFESIMATLGDDPVDVVISDMAPNISG 128
Query: 128 VTTKDAALSVELGMRALDLAVGXXXXXXXXXXXXXXYIREEQSVDDPSGSDDKGVLRVGG 187
VT D A S+ L ALD+A VL+ G
Sbjct: 129 VTVADQASSMYLVELALDMA--------------------------------SQVLKPKG 156
Query: 188 NLIIKLLESEDSKEISQICKPLFRKSSWLRPKATRPSSREIYLICQGLK 236
+ + K+ + E E + + +F K +P ++R SRE+Y++ +G K
Sbjct: 157 SFLAKVFQGEGYDEYLKSVRAVFDKVVVRKPDSSRSRSREVYILGKGFK 205