Miyakogusa Predicted Gene
- Lj2g3v2379070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2379070.1 tr|J3SFI5|J3SFI5_CROAD tRNA pseudouridine
synthase OS=Crotalus adamanteus PE=2 SV=1,31.35,2e-18,Pseudouridine
synthase,Pseudouridine synthase, catalytic domain; no
description,Pseudouridine syntha,CUFF.38916.1
(498 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7KAA8_SOYBN (tr|K7KAA8) Uncharacterized protein OS=Glycine max ... 706 0.0
I1JSA0_SOYBN (tr|I1JSA0) Uncharacterized protein OS=Glycine max ... 684 0.0
G7KFJ6_MEDTR (tr|G7KFJ6) tRNA pseudouridine synthase OS=Medicago... 669 0.0
A5C2V2_VITVI (tr|A5C2V2) Putative uncharacterized protein OS=Vit... 566 e-159
F6GUG3_VITVI (tr|F6GUG3) Putative uncharacterized protein OS=Vit... 563 e-158
M5WP30_PRUPE (tr|M5WP30) Uncharacterized protein OS=Prunus persi... 557 e-156
K4CTC1_SOLLC (tr|K4CTC1) tRNA pseudouridine synthase OS=Solanum ... 542 e-151
G7KFJ8_MEDTR (tr|G7KFJ8) Pseudouridylate synthase OS=Medicago tr... 539 e-151
K7KAB0_SOYBN (tr|K7KAB0) tRNA pseudouridine synthase OS=Glycine ... 537 e-150
B9I6V0_POPTR (tr|B9I6V0) tRNA pseudouridine synthase (Fragment) ... 535 e-149
M0TC53_MUSAM (tr|M0TC53) Uncharacterized protein OS=Musa acumina... 522 e-145
D7LBM5_ARALL (tr|D7LBM5) tRNA pseudouridine synthase family prot... 497 e-138
G8GJ72_LINUS (tr|G8GJ72) Putative pseudouridine synthase family ... 493 e-137
R0HSD1_9BRAS (tr|R0HSD1) Uncharacterized protein OS=Capsella rub... 481 e-133
M4E1Y9_BRARP (tr|M4E1Y9) Uncharacterized protein OS=Brassica rap... 479 e-132
I1H5P7_BRADI (tr|I1H5P7) Uncharacterized protein OS=Brachypodium... 469 e-130
K4A8J3_SETIT (tr|K4A8J3) Uncharacterized protein OS=Setaria ital... 468 e-129
C5X0R7_SORBI (tr|C5X0R7) Putative uncharacterized protein Sb01g0... 468 e-129
J3LNL0_ORYBR (tr|J3LNL0) Uncharacterized protein OS=Oryza brachy... 466 e-128
I1PB50_ORYGL (tr|I1PB50) Uncharacterized protein OS=Oryza glaber... 462 e-127
Q10LR0_ORYSJ (tr|Q10LR0) Os03g0338600 protein OS=Oryza sativa su... 462 e-127
A3AHR5_ORYSJ (tr|A3AHR5) Putative uncharacterized protein OS=Ory... 462 e-127
B4FLR5_MAIZE (tr|B4FLR5) Uncharacterized protein OS=Zea mays PE=... 461 e-127
M7ZGK9_TRIUA (tr|M7ZGK9) Putative tRNA pseudouridine synthase OS... 419 e-114
M8C578_AEGTA (tr|M8C578) Putative tRNA pseudouridine synthase OS... 419 e-114
B9RVG5_RICCO (tr|B9RVG5) tRNA pseudouridine synthase OS=Ricinus ... 371 e-100
B4FF04_MAIZE (tr|B4FF04) Uncharacterized protein OS=Zea mays PE=... 358 2e-96
Q10LQ9_ORYSJ (tr|Q10LQ9) tRNA pseudouridine synthase family prot... 357 8e-96
A9T4Z2_PHYPA (tr|A9T4Z2) tRNA pseudouridine synthase (Fragment) ... 328 4e-87
D8RMK1_SELML (tr|D8RMK1) tRNA pseudouridine synthase (Fragment) ... 308 2e-81
B8AP18_ORYSI (tr|B8AP18) Putative uncharacterized protein OS=Ory... 246 1e-62
M0VAM5_HORVD (tr|M0VAM5) Uncharacterized protein OS=Hordeum vulg... 234 7e-59
D8SIT9_SELML (tr|D8SIT9) tRNA pseudouridine synthase OS=Selagine... 203 2e-49
D8QP88_SELML (tr|D8QP88) tRNA pseudouridine synthase (Fragment) ... 200 1e-48
Q00TY6_OSTTA (tr|Q00TY6) PUSH_ARATH Putative tRNA pseudouridine ... 194 9e-47
A4S8M4_OSTLU (tr|A4S8M4) Predicted protein OS=Ostreococcus lucim... 184 6e-44
A8J7Q4_CHLRE (tr|A8J7Q4) tRNA pseudouridine synthase (Fragment) ... 179 2e-42
M1BMH1_SOLTU (tr|M1BMH1) Uncharacterized protein OS=Solanum tube... 173 2e-40
F0WUQ6_9STRA (tr|F0WUQ6) Ubiquitin fusion degradation protein pu... 172 4e-40
C1EHS5_MICSR (tr|C1EHS5) Predicted protein OS=Micromonas sp. (st... 169 2e-39
B9RVG6_RICCO (tr|B9RVG6) Putative uncharacterized protein OS=Ric... 168 5e-39
A9P2G1_PICSI (tr|A9P2G1) tRNA pseudouridine synthase OS=Picea si... 165 3e-38
M4C131_HYAAE (tr|M4C131) Uncharacterized protein OS=Hyaloperonos... 164 6e-38
M2Y4H5_GALSU (tr|M2Y4H5) tRNA pseudouridine synthase A OS=Galdie... 161 6e-37
K8F680_9CHLO (tr|K8F680) Uncharacterized protein OS=Bathycoccus ... 160 1e-36
H3GMB8_PHYRM (tr|H3GMB8) Uncharacterized protein OS=Phytophthora... 158 4e-36
D0NH89_PHYIT (tr|D0NH89) Ubiquitin fusion degradation protein, p... 157 1e-35
G4YJ60_PHYSP (tr|G4YJ60) Putative uncharacterized protein OS=Phy... 156 2e-35
I0Z2B4_9CHLO (tr|I0Z2B4) tRNA pseudouridine synthase OS=Coccomyx... 144 6e-32
D8LDS4_ECTSI (tr|D8LDS4) Pseudouridylate synthase, putative OS=E... 144 1e-31
K3WTN5_PYTUL (tr|K3WTN5) Uncharacterized protein OS=Pythium ulti... 138 4e-30
D3BCX2_POLPA (tr|D3BCX2) Uncharacterized protein OS=Polysphondyl... 129 2e-27
I0Z8C0_9CHLO (tr|I0Z8C0) tRNA pseudouridine synthase (Fragment) ... 123 1e-25
L1IUW8_GUITH (tr|L1IUW8) Uncharacterized protein OS=Guillardia t... 121 7e-25
D7KJ05_ARALL (tr|D7KJ05) tRNA pseudouridine synthase family prot... 116 2e-23
B9INP6_POPTR (tr|B9INP6) Predicted protein OS=Populus trichocarp... 116 3e-23
F0WU32_9STRA (tr|F0WU32) tRNA pseudouridine synthase OS=Albugo l... 115 4e-23
F4PR36_DICFS (tr|F4PR36) Putative uncharacterized protein OS=Dic... 114 1e-22
M4DH09_BRARP (tr|M4DH09) tRNA pseudouridine synthase OS=Brassica... 113 1e-22
F4PY29_DICFS (tr|F4PY29) Putative uncharacterized protein OS=Dic... 113 2e-22
Q54TQ3_DICDI (tr|Q54TQ3) tRNA pseudouridine synthase OS=Dictyost... 111 7e-22
M3K4V8_CANMA (tr|M3K4V8) Pseudouridylate synthase OS=Candida mal... 110 2e-21
D8TRD2_VOLCA (tr|D8TRD2) Putative uncharacterized protein OS=Vol... 109 2e-21
R7QMB7_CHOCR (tr|R7QMB7) Stackhouse genomic scaffold, scaffold_5... 109 3e-21
D8LBC7_ECTSI (tr|D8LBC7) tRNA Pseudouridine Synthase OS=Ectocarp... 108 3e-21
H8X8J4_CANO9 (tr|H8X8J4) Pus1 protein OS=Candida orthopsilosis (... 108 4e-21
G8B532_CANPC (tr|G8B532) Putative uncharacterized protein OS=Can... 107 9e-21
L1LFX5_BABEQ (tr|L1LFX5) tRNA pseudouridine synthase OS=Babesia ... 107 1e-20
C1N7G7_MICPC (tr|C1N7G7) tRNA pseudouridine synthase (Fragment) ... 107 1e-20
A5E5G0_LODEL (tr|A5E5G0) tRNA pseudouridine synthase OS=Lodderom... 106 2e-20
K3WAT4_PYTUL (tr|K3WAT4) tRNA pseudouridine synthase OS=Pythium ... 106 3e-20
F4PH32_DICFS (tr|F4PH32) tRNA pseudouridylate synthase OS=Dictyo... 105 3e-20
A4S9Q6_OSTLU (tr|A4S9Q6) tRNA pseudouridine synthase (Fragment) ... 105 3e-20
D7KT99_ARALL (tr|D7KT99) tRNA pseudouridine synthase OS=Arabidop... 105 5e-20
M1VGQ4_CYAME (tr|M1VGQ4) Similar to tRNA-pseudouridine synthase ... 105 5e-20
R7QUC6_CHOCR (tr|R7QUC6) Stackhouse genomic scaffold, scaffold_7... 105 6e-20
F0YHR5_AURAN (tr|F0YHR5) tRNA pseudouridine synthase (Fragment) ... 104 7e-20
A5DR71_PICGU (tr|A5DR71) tRNA pseudouridine synthase OS=Meyerozy... 104 8e-20
G3Q032_GASAC (tr|G3Q032) tRNA pseudouridine synthase OS=Gasteros... 104 1e-19
G3Q027_GASAC (tr|G3Q027) tRNA pseudouridine synthase OS=Gasteros... 103 1e-19
G4YFE8_PHYSP (tr|G4YFE8) tRNA pseudouridine synthase OS=Phytopht... 103 2e-19
H9HBG7_ATTCE (tr|H9HBG7) tRNA pseudouridine synthase OS=Atta cep... 103 2e-19
H9K7G2_APIME (tr|H9K7G2) tRNA pseudouridine synthase OS=Apis mel... 102 2e-19
B5X747_SALSA (tr|B5X747) tRNA pseudouridine synthase OS=Salmo sa... 102 2e-19
C1EFK8_MICSR (tr|C1EFK8) tRNA pseudouridine synthase (Fragment) ... 102 3e-19
C5M8T8_CANTT (tr|C5M8T8) tRNA pseudouridine synthase OS=Candida ... 102 4e-19
B9WIU7_CANDC (tr|B9WIU7) tRNA pseudouridine synthase OS=Candida ... 102 5e-19
J3SFI5_CROAD (tr|J3SFI5) tRNA pseudouridine synthase OS=Crotalus... 102 5e-19
D5G784_TUBMM (tr|D5G784) tRNA pseudouridine synthase OS=Tuber me... 101 7e-19
M4BXA0_HYAAE (tr|M4BXA0) tRNA pseudouridine synthase OS=Hyaloper... 101 7e-19
E1ZUF7_CHLVA (tr|E1ZUF7) Putative uncharacterized protein OS=Chl... 101 7e-19
F0ZAZ5_DICPU (tr|F0ZAZ5) tRNA pseudouridine synthase OS=Dictyost... 100 9e-19
G8Y940_PICSO (tr|G8Y940) Piso0_004551 protein OS=Pichia sorbitop... 100 9e-19
G3UMT0_LOXAF (tr|G3UMT0) tRNA pseudouridine synthase (Fragment) ... 100 1e-18
G3AU83_SPAPN (tr|G3AU83) Putative uncharacterized protein OS=Spa... 100 2e-18
F0ZX60_DICPU (tr|F0ZX60) Putative uncharacterized protein OS=Dic... 100 2e-18
C4YSR3_CANAW (tr|C4YSR3) tRNA pseudouridine synthase OS=Candida ... 100 2e-18
F4W9T5_ACREC (tr|F4W9T5) tRNA pseudouridine synthase OS=Acromyrm... 99 4e-18
H0ZCK2_TAEGU (tr|H0ZCK2) tRNA pseudouridine synthase (Fragment) ... 99 4e-18
K7GE06_PELSI (tr|K7GE06) tRNA pseudouridine synthase OS=Pelodisc... 99 4e-18
C3YJ71_BRAFL (tr|C3YJ71) tRNA pseudouridine synthase OS=Branchio... 99 5e-18
E0V909_PEDHC (tr|E0V909) tRNA pseudouridine synthase OS=Pediculu... 99 5e-18
D3BRD6_POLPA (tr|D3BRD6) tRNA pseudouridylate synthase OS=Polysp... 99 5e-18
G3BAF3_CANTC (tr|G3BAF3) Putative uncharacterized protein OS=Can... 99 5e-18
L8ISU5_BOSMU (tr|L8ISU5) tRNA pseudouridine synthase OS=Bos grun... 99 5e-18
E1BDL3_BOVIN (tr|E1BDL3) tRNA pseudouridine synthase OS=Bos taur... 99 5e-18
G5AWT0_HETGA (tr|G5AWT0) tRNA pseudouridine synthase OS=Heteroce... 99 5e-18
A0E7K0_PARTE (tr|A0E7K0) tRNA pseudouridine synthase OS=Parameci... 98 6e-18
F1NZ90_CHICK (tr|F1NZ90) tRNA pseudouridine synthase (Fragment) ... 98 7e-18
H9GCL0_ANOCA (tr|H9GCL0) tRNA pseudouridine synthase (Fragment) ... 98 7e-18
N9V0D5_ENTHI (tr|N9V0D5) tRNA pseudouridine synthase A, putative... 98 7e-18
M7W1N4_ENTHI (tr|M7W1N4) tRNA pseudouridine synthase A, putative... 98 7e-18
M3UHA6_ENTHI (tr|M3UHA6) tRNA pseudouridine synthase OS=Entamoeb... 98 7e-18
M2RXM6_ENTHI (tr|M2RXM6) tRNA pseudouridine synthase OS=Entamoeb... 98 7e-18
C4LUW4_ENTHI (tr|C4LUW4) tRNA pseudouridine synthase OS=Entamoeb... 98 7e-18
D0P1S2_PHYIT (tr|D0P1S2) tRNA pseudouridine synthase OS=Phytopht... 98 7e-18
M3WDX2_FELCA (tr|M3WDX2) tRNA pseudouridine synthase (Fragment) ... 98 7e-18
K2GZT2_ENTNP (tr|K2GZT2) tRNA pseudouridine synthase OS=Entamoeb... 98 8e-18
G3BAF4_CANTC (tr|G3BAF4) Putative uncharacterized protein OS=Can... 98 8e-18
A3LT93_PICST (tr|A3LT93) tRNA pseudouridine synthase (Fragment) ... 98 9e-18
K9ITD6_DESRO (tr|K9ITD6) tRNA pseudouridine synthase (Fragment) ... 98 1e-17
G3HCC4_CRIGR (tr|G3HCC4) tRNA pseudouridine synthase OS=Cricetul... 97 1e-17
H3B8J2_LATCH (tr|H3B8J2) tRNA pseudouridine synthase (Fragment) ... 97 1e-17
B0EEF0_ENTDS (tr|B0EEF0) tRNA pseudouridine synthase OS=Entamoeb... 97 1e-17
B3S1D9_TRIAD (tr|B3S1D9) tRNA pseudouridine synthase OS=Trichopl... 97 1e-17
J9IRD9_9SPIT (tr|J9IRD9) tRNA pseudouridine synthase OS=Oxytrich... 97 2e-17
H2Q778_PANTR (tr|H2Q778) tRNA pseudouridine synthase OS=Pan trog... 97 2e-17
K7AZX7_PANTR (tr|K7AZX7) tRNA pseudouridine synthase OS=Pan trog... 97 2e-17
I3EN05_NEMP1 (tr|I3EN05) tRNA pseudouridine synthase OS=Nematoci... 97 2e-17
I3EIZ0_NEMP3 (tr|I3EIZ0) tRNA pseudouridine synthase OS=Nematoci... 97 2e-17
H3BGZ8_LATCH (tr|H3BGZ8) tRNA pseudouridine synthase OS=Latimeri... 97 2e-17
A9TRH5_PHYPA (tr|A9TRH5) tRNA pseudouridine synthase OS=Physcomi... 97 2e-17
H2B1T9_KAZAF (tr|H2B1T9) tRNA pseudouridine synthase OS=Kazachst... 96 2e-17
Q3TT85_MOUSE (tr|Q3TT85) tRNA pseudouridine synthase OS=Mus musc... 96 3e-17
F1RFR2_PIG (tr|F1RFR2) tRNA pseudouridine synthase OS=Sus scrofa... 96 3e-17
D6WB40_TRICA (tr|D6WB40) tRNA pseudouridine synthase OS=Triboliu... 96 3e-17
F7EPT1_CALJA (tr|F7EPT1) tRNA pseudouridine synthase OS=Callithr... 96 3e-17
B1WBN5_RAT (tr|B1WBN5) tRNA pseudouridine synthase OS=Rattus nor... 96 4e-17
E3LJ74_CAERE (tr|E3LJ74) tRNA pseudouridine synthase OS=Caenorha... 96 4e-17
C5ISB6_SHEEP (tr|C5ISB6) tRNA pseudouridine synthase OS=Ovis ari... 96 4e-17
H9JGP2_BOMMO (tr|H9JGP2) tRNA pseudouridine synthase OS=Bombyx m... 96 4e-17
F6QV98_XENTR (tr|F6QV98) tRNA pseudouridine synthase OS=Xenopus ... 96 5e-17
H0WZ29_OTOGA (tr|H0WZ29) tRNA pseudouridine synthase (Fragment) ... 95 5e-17
F6ZG84_ORNAN (tr|F6ZG84) tRNA pseudouridine synthase OS=Ornithor... 95 6e-17
E2B4B1_HARSA (tr|E2B4B1) tRNA pseudouridine synthase OS=Harpegna... 95 6e-17
E2QW32_CANFA (tr|E2QW32) tRNA pseudouridine synthase OS=Canis fa... 95 6e-17
H9Z2E9_MACMU (tr|H9Z2E9) tRNA pseudouridine synthase OS=Macaca m... 95 7e-17
H2VS73_CAEJA (tr|H2VS73) tRNA pseudouridine synthase OS=Caenorha... 95 7e-17
E2A5T0_CAMFO (tr|E2A5T0) tRNA pseudouridine synthase OS=Camponot... 95 7e-17
M3XT90_MUSPF (tr|M3XT90) tRNA pseudouridine synthase OS=Mustela ... 95 7e-17
A8WJJ2_CAEBR (tr|A8WJJ2) tRNA pseudouridine synthase OS=Caenorha... 95 7e-17
F6SK59_MONDO (tr|F6SK59) tRNA pseudouridine synthase OS=Monodelp... 95 7e-17
H0UV99_CAVPO (tr|H0UV99) tRNA pseudouridine synthase (Fragment) ... 95 8e-17
J9NVH5_CANFA (tr|J9NVH5) tRNA pseudouridine synthase OS=Canis fa... 95 8e-17
G7N6D0_MACMU (tr|G7N6D0) tRNA pseudouridine synthase (Fragment) ... 95 8e-17
F7G9B1_MACMU (tr|F7G9B1) tRNA pseudouridine synthase OS=Macaca m... 95 8e-17
G9KJH1_MUSPF (tr|G9KJH1) tRNA pseudouridine synthase (Fragment) ... 95 8e-17
G3WJ74_SARHA (tr|G3WJ74) tRNA pseudouridine synthase OS=Sarcophi... 95 8e-17
K8F2K7_9CHLO (tr|K8F2K7) Uncharacterized protein OS=Bathycoccus ... 94 8e-17
G7PJH1_MACFA (tr|G7PJH1) tRNA pseudouridine synthase (Fragment) ... 94 8e-17
F7G6D4_MACMU (tr|F7G6D4) tRNA pseudouridine synthase (Fragment) ... 94 9e-17
G8JLB3_HUMAN (tr|G8JLB3) tRNA pseudouridine synthase (Fragment) ... 94 9e-17
G3R1B2_GORGO (tr|G3R1B2) tRNA pseudouridine synthase OS=Gorilla ... 94 9e-17
E5KMT5_HUMAN (tr|E5KMT5) tRNA pseudouridine synthase OS=Homo sap... 94 9e-17
H9F4C3_MACMU (tr|H9F4C3) tRNA pseudouridine synthase (Fragment) ... 94 9e-17
E5KMT6_HUMAN (tr|E5KMT6) tRNA pseudouridine synthase OS=Homo sap... 94 1e-16
G3WJ75_SARHA (tr|G3WJ75) tRNA pseudouridine synthase OS=Sarcophi... 94 1e-16
J4W9A0_BEAB2 (tr|J4W9A0) tRNA pseudouridine synthase A OS=Beauve... 94 1e-16
G0N1C3_CAEBE (tr|G0N1C3) tRNA pseudouridine synthase OS=Caenorha... 94 1e-16
K5VFR3_PHACS (tr|K5VFR3) Uncharacterized protein OS=Phanerochaet... 94 1e-16
G1M533_AILME (tr|G1M533) tRNA pseudouridine synthase (Fragment) ... 94 1e-16
G1RAV7_NOMLE (tr|G1RAV7) tRNA pseudouridine synthase (Fragment) ... 94 1e-16
D2HLG7_AILME (tr|D2HLG7) tRNA pseudouridine synthase (Fragment) ... 94 1e-16
G1U5D4_RABIT (tr|G1U5D4) tRNA pseudouridine synthase (Fragment) ... 94 1e-16
C4QXS5_PICPG (tr|C4QXS5) tRNA:pseudouridine synthase, introduces... 94 1e-16
G3JB53_CORMM (tr|G3JB53) tRNA pseudouridine synthase OS=Cordycep... 94 1e-16
F2QLN1_PICP7 (tr|F2QLN1) tRNA pseudouridine synthase A OS=Komaga... 94 2e-16
M9N2J5_ASHGS (tr|M9N2J5) FAFL105Cp OS=Ashbya gossypii FDAG1 GN=F... 94 2e-16
G1SST0_RABIT (tr|G1SST0) tRNA pseudouridine synthase (Fragment) ... 94 2e-16
M3ZFI9_XIPMA (tr|M3ZFI9) tRNA pseudouridine synthase (Fragment) ... 94 2e-16
J0CVY8_AURDE (tr|J0CVY8) Pseudouridine synthase OS=Auricularia d... 94 2e-16
M2XVR2_GALSU (tr|M2XVR2) tRNA pseudouridine synthase A OS=Galdie... 93 2e-16
H2NJ61_PONAB (tr|H2NJ61) tRNA pseudouridine synthase OS=Pongo ab... 93 2e-16
Q9XXN0_CAEEL (tr|Q9XXN0) tRNA pseudouridine synthase OS=Caenorha... 93 2e-16
G0RJ00_HYPJQ (tr|G0RJ00) Putative uncharacterized protein (Fragm... 93 2e-16
G9NCA3_HYPVG (tr|G9NCA3) Uncharacterized protein (Fragment) OS=H... 93 3e-16
G2XHH6_VERDV (tr|G2XHH6) tRNA pseudouridine synthase OS=Verticil... 93 3e-16
F1QWW1_DANRE (tr|F1QWW1) tRNA pseudouridine synthase OS=Danio re... 93 3e-16
L5KTU6_PTEAL (tr|L5KTU6) tRNA pseudouridine synthase OS=Pteropus... 93 3e-16
G9P6Z9_HYPAI (tr|G9P6Z9) Putative uncharacterized protein OS=Hyp... 93 3e-16
M7BSX9_CHEMY (tr|M7BSX9) Uncharacterized protein OS=Chelonia myd... 92 4e-16
R9APG6_WALIC (tr|R9APG6) tRNA pseudouridine synthase 1 OS=Wallem... 92 4e-16
E6ZSJ4_SPORE (tr|E6ZSJ4) Related to PUS1-pseudouridine synthase ... 92 4e-16
F1REI9_DANRE (tr|F1REI9) tRNA pseudouridine synthase OS=Danio re... 92 4e-16
G8BTZ1_TETPH (tr|G8BTZ1) Uncharacterized protein OS=Tetrapisispo... 92 4e-16
Q6FJJ6_CANGA (tr|Q6FJJ6) tRNA pseudouridine synthase OS=Candida ... 92 4e-16
Q54FA0_DICDI (tr|Q54FA0) tRNA pseudouridylate synthase OS=Dictyo... 92 4e-16
H2RY29_TAKRU (tr|H2RY29) tRNA pseudouridine synthase OS=Takifugu... 92 5e-16
Q4T6B0_TETNG (tr|Q4T6B0) tRNA pseudouridine synthase (Fragment) ... 92 5e-16
I2K0P3_DEKBR (tr|I2K0P3) tRNA pseudouridine synthase OS=Dekkera ... 92 6e-16
K4B5X8_SOLLC (tr|K4B5X8) Uncharacterized protein OS=Solanum lyco... 92 6e-16
Q5PR50_DANRE (tr|Q5PR50) tRNA pseudouridine synthase OS=Danio re... 92 6e-16
H3CE76_TETNG (tr|H3CE76) tRNA pseudouridine synthase OS=Tetraodo... 92 6e-16
J7R7L3_KAZNA (tr|J7R7L3) tRNA pseudouridine synthase OS=Kazachst... 92 7e-16
E6RFY2_CRYGW (tr|E6RFY2) Pseudouridylate synthase, putative OS=C... 92 7e-16
C4Y6M3_CLAL4 (tr|C4Y6M3) tRNA pseudouridine synthase (Fragment) ... 92 7e-16
Q54LM5_DICDI (tr|Q54LM5) Putative uncharacterized protein OS=Dic... 91 9e-16
I4YHS9_WALSC (tr|I4YHS9) Pseudouridine synthase OS=Wallemia sebi... 91 9e-16
A7RII9_NEMVE (tr|A7RII9) tRNA pseudouridine synthase (Fragment) ... 91 1e-15
M1WCJ0_CLAPU (tr|M1WCJ0) Probable PUS1-tRNA-pseudouridine syntha... 91 1e-15
J9VYS1_CRYNH (tr|J9VYS1) Pseudouridylate synthase OS=Cryptococcu... 91 1e-15
E7R1Z2_PICAD (tr|E7R1Z2) tRNA pseudouridine synthase OS=Pichia a... 91 1e-15
Q7S319_NEUCR (tr|Q7S319) Putative uncharacterized protein OS=Neu... 91 1e-15
Q5K777_CRYNJ (tr|Q5K777) Pseudouridylate synthase, putative OS=C... 91 1e-15
Q5AZW5_EMENI (tr|Q5AZW5) tRNA pseudouridine synthase, putative (... 91 1e-15
Q55HN9_CRYNB (tr|Q55HN9) Putative uncharacterized protein OS=Cry... 91 1e-15
R4XMG5_9ASCO (tr|R4XMG5) Uncharacterized protein OS=Taphrina def... 91 1e-15
G4URI6_NEUT9 (tr|G4URI6) Pseudouridine synthase OS=Neurospora te... 91 1e-15
F8MKT3_NEUT8 (tr|F8MKT3) Putative uncharacterized protein OS=Neu... 91 1e-15
M9M4H0_9BASI (tr|M9M4H0) Pseudouridylate synthase OS=Pseudozyma ... 91 2e-15
Q00ST8_OSTTA (tr|Q00ST8) tRNA pseudouridine synthase OS=Ostreoco... 90 2e-15
R9NY03_9BASI (tr|R9NY03) tRNA pseudouridine synthase OS=Pseudozy... 90 2e-15
E9E8Y4_METAQ (tr|E9E8Y4) tRNA pseudouridine synthase OS=Metarhiz... 90 2e-15
G8JP34_ERECY (tr|G8JP34) Uncharacterized protein OS=Eremothecium... 90 2e-15
D8U5C8_VOLCA (tr|D8U5C8) Putative uncharacterized protein OS=Vol... 90 2e-15
E9F4G5_METAR (tr|E9F4G5) tRNA pseudouridine synthase OS=Metarhiz... 90 2e-15
F7WBX3_SORMK (tr|F7WBX3) WGS project CABT00000000 data, contig 2... 90 2e-15
R7UL32_9ANNE (tr|R7UL32) Uncharacterized protein (Fragment) OS=C... 90 2e-15
N4W184_COLOR (tr|N4W184) tRNA pseudouridine synthase OS=Colletot... 90 2e-15
E3Q7Q3_COLGM (tr|E3Q7Q3) tRNA pseudouridine synthase A OS=Collet... 90 2e-15
G2QGQ1_THIHA (tr|G2QGQ1) Uncharacterized protein OS=Thielavia he... 90 3e-15
C5L6H0_PERM5 (tr|C5L6H0) Pseudouridylate synthase, putative OS=P... 90 3e-15
G2R961_THITE (tr|G2R961) Putative uncharacterized protein OS=Thi... 89 3e-15
D8SNZ9_SELML (tr|D8SNZ9) tRNA pseudouridine synthase (Fragment) ... 89 3e-15
E9GZJ2_DAPPU (tr|E9GZJ2) tRNA pseudouridine synthase (Fragment) ... 89 3e-15
B8NBS8_ASPFN (tr|B8NBS8) tRNA pseudouridine synthase, putative O... 89 3e-15
D8SSE2_SELML (tr|D8SSE2) tRNA pseudouridine synthase (Fragment) ... 89 3e-15
F6Y8V2_XENTR (tr|F6Y8V2) tRNA pseudouridine synthase (Fragment) ... 89 4e-15
A7ASP1_BABBO (tr|A7ASP1) tRNA pseudouridine synthase OS=Babesia ... 89 4e-15
M7U0L3_9PEZI (tr|M7U0L3) Putative trna pseudouridine synthase a ... 89 4e-15
L2FXK4_COLGN (tr|L2FXK4) tRNA pseudouridine synthase OS=Colletot... 89 4e-15
B0CU40_LACBS (tr|B0CU40) Predicted protein OS=Laccaria bicolor (... 89 4e-15
G0S3J9_CHATD (tr|G0S3J9) Putative uncharacterized protein OS=Cha... 89 4e-15
H0GPC1_9SACH (tr|H0GPC1) Pus1p OS=Saccharomyces cerevisiae x Sac... 89 5e-15
Q2TZH0_ASPOR (tr|Q2TZH0) Pseudouridylate synthase OS=Aspergillus... 89 5e-15
C5E4L6_ZYGRC (tr|C5E4L6) ZYRO0E07106p OS=Zygosaccharomyces rouxi... 89 5e-15
H3I1T3_STRPU (tr|H3I1T3) tRNA pseudouridine synthase OS=Strongyl... 89 5e-15
N1NWM6_YEASX (tr|N1NWM6) Pus1p OS=Saccharomyces cerevisiae CEN.P... 89 5e-15
C8ZIG7_YEAS8 (tr|C8ZIG7) Pus1p OS=Saccharomyces cerevisiae (stra... 89 5e-15
B3LKL8_YEAS1 (tr|B3LKL8) tRNA pseudouridine synthase OS=Saccharo... 89 5e-15
A6ZW43_YEAS7 (tr|A6ZW43) tRNA-pseudouridine synthase OS=Saccharo... 89 5e-15
C7GN39_YEAS2 (tr|C7GN39) Pus1p OS=Saccharomyces cerevisiae (stra... 89 5e-15
K7IPF3_NASVI (tr|K7IPF3) tRNA pseudouridine synthase OS=Nasonia ... 89 5e-15
I8IIY0_ASPO3 (tr|I8IIY0) Pseudouridylate synthase OS=Aspergillus... 89 5e-15
G2WNX3_YEASK (tr|G2WNX3) K7_Pus1p OS=Saccharomyces cerevisiae (s... 89 5e-15
E7QA51_YEASB (tr|E7QA51) Pus1p OS=Saccharomyces cerevisiae (stra... 89 5e-15
H1VP93_COLHI (tr|H1VP93) tRNA pseudouridine synthase A OS=Collet... 89 5e-15
A7TTG9_VANPO (tr|A7TTG9) Putative uncharacterized protein OS=Van... 89 5e-15
E7QLM8_YEASZ (tr|E7QLM8) Pus1p OS=Saccharomyces cerevisiae (stra... 89 5e-15
E7KVB9_YEASL (tr|E7KVB9) Pus1p OS=Saccharomyces cerevisiae (stra... 89 5e-15
B5VSW8_YEAS6 (tr|B5VSW8) YPL212Cp-like protein OS=Saccharomyces ... 89 6e-15
E7M0Y8_YEASV (tr|E7M0Y8) Pus1p OS=Saccharomyces cerevisiae (stra... 89 6e-15
G0V5C7_NAUCC (tr|G0V5C7) Uncharacterized protein OS=Naumovozyma ... 89 6e-15
D2VHP3_NAEGR (tr|D2VHP3) tRNA pseudouridine synthase OS=Naegleri... 89 6e-15
Q2H827_CHAGB (tr|Q2H827) Putative uncharacterized protein OS=Cha... 88 6e-15
H8ZAM6_NEMS1 (tr|H8ZAM6) tRNA pseudouridine synthase OS=Nematoci... 88 6e-15
H2M509_ORYLA (tr|H2M509) tRNA pseudouridine synthase (Fragment) ... 88 7e-15
B5Y3E2_PHATC (tr|B5Y3E2) tRNA pseudouridine synthase (Fragment) ... 88 7e-15
G1PT47_MYOLU (tr|G1PT47) tRNA pseudouridine synthase (Fragment) ... 88 9e-15
R8BQ35_9PEZI (tr|R8BQ35) Putative trna pseudouridine synthase pr... 88 1e-14
J3PGT8_GAGT3 (tr|J3PGT8) Uncharacterized protein OS=Gaeumannomyc... 88 1e-14
J3KI04_COCIM (tr|J3KI04) tRNA pseudouridine(38-40) synthase OS=C... 87 1e-14
E9DDA4_COCPS (tr|E9DDA4) tRNA pseudouridine synthase OS=Coccidio... 87 1e-14
C5PHU1_COCP7 (tr|C5PHU1) tRNA pseudouridine synthase, putative O... 87 1e-14
H0H1U2_9SACH (tr|H0H1U2) Pus1p OS=Saccharomyces cerevisiae x Sac... 87 1e-14
I1RR72_GIBZE (tr|I1RR72) Uncharacterized protein OS=Gibberella z... 87 1e-14
C7Z7S5_NECH7 (tr|C7Z7S5) Predicted protein OS=Nectria haematococ... 87 1e-14
J5P676_SACK1 (tr|J5P676) PUS1-like protein OS=Saccharomyces kudr... 87 1e-14
K3UZD1_FUSPC (tr|K3UZD1) Uncharacterized protein OS=Fusarium pse... 87 1e-14
C5E2C8_LACTC (tr|C5E2C8) KLTH0H03894p OS=Lachancea thermotoleran... 87 1e-14
R0K1I8_SETTU (tr|R0K1I8) Uncharacterized protein OS=Setosphaeria... 87 1e-14
I3J7E3_ORENI (tr|I3J7E3) tRNA pseudouridine synthase (Fragment) ... 87 1e-14
I3MGZ0_SPETR (tr|I3MGZ0) tRNA pseudouridine synthase OS=Spermoph... 87 2e-14
Q4P397_USTMA (tr|Q4P397) Putative uncharacterized protein OS=Ust... 87 2e-14
B6JUY9_SCHJY (tr|B6JUY9) tRNA pseudouridine synthase OS=Schizosa... 87 2e-14
B2AUX9_PODAN (tr|B2AUX9) Predicted CDS Pa_7_4740 OS=Podospora an... 87 2e-14
L8FWM4_GEOD2 (tr|L8FWM4) Uncharacterized protein OS=Geomyces des... 87 2e-14
F1KWM2_ASCSU (tr|F1KWM2) tRNA pseudouridine synthase OS=Ascaris ... 87 2e-14
I2FSJ1_USTH4 (tr|I2FSJ1) Related to PUS1-pseudouridine synthase ... 86 2e-14
M7WS58_RHOTO (tr|M7WS58) tRNA pseudouridine synthase A OS=Rhodos... 86 2e-14
H2B180_KAZAF (tr|H2B180) Uncharacterized protein OS=Kazachstania... 86 3e-14
G0WCG5_NAUDC (tr|G0WCG5) Uncharacterized protein OS=Naumovozyma ... 86 3e-14
N1RCK8_FUSOX (tr|N1RCK8) tRNA pseudouridine synthase 1 OS=Fusari... 86 3e-14
N4U264_FUSOX (tr|N4U264) tRNA pseudouridine synthase 1 OS=Fusari... 86 3e-14
M7NX97_9ASCO (tr|M7NX97) Uncharacterized protein OS=Pneumocystis... 86 3e-14
F9FWW7_FUSOF (tr|F9FWW7) Uncharacterized protein OS=Fusarium oxy... 86 4e-14
G1MSZ1_MELGA (tr|G1MSZ1) tRNA pseudouridine synthase (Fragment) ... 86 4e-14
M2SMJ4_COCSA (tr|M2SMJ4) Uncharacterized protein OS=Bipolaris so... 86 4e-14
Q0C9F1_ASPTN (tr|Q0C9F1) Putative uncharacterized protein OS=Asp... 86 4e-14
B2WLB6_PYRTR (tr|B2WLB6) tRNA pseudouridine synthase 1 OS=Pyreno... 86 4e-14
N4WHI2_COCHE (tr|N4WHI2) Uncharacterized protein OS=Bipolaris ma... 86 4e-14
M2SKH9_COCHE (tr|M2SKH9) Uncharacterized protein OS=Bipolaris ma... 86 4e-14
H7BX59_MOUSE (tr|H7BX59) tRNA pseudouridine synthase OS=Mus musc... 86 5e-14
A2DE30_TRIVA (tr|A2DE30) tRNA pseudouridine synthase OS=Trichomo... 86 5e-14
E3RT54_PYRTT (tr|E3RT54) Putative uncharacterized protein OS=Pyr... 86 5e-14
H3GSS2_PHYRM (tr|H3GSS2) tRNA pseudouridine synthase OS=Phytopht... 85 5e-14
K8YPP2_9STRA (tr|K8YPP2) tRNA pseudouridine synthase (Fragment) ... 85 6e-14
Q0U5E9_PHANO (tr|Q0U5E9) Putative uncharacterized protein OS=Pha... 85 6e-14
M7USS8_BOTFU (tr|M7USS8) Putative trna pseudouridine synthase pr... 85 6e-14
G2YW67_BOTF4 (tr|G2YW67) Similar to tRNA pseudouridine synthase ... 85 6e-14
C5FPN1_ARTOC (tr|C5FPN1) tRNA pseudouridylate synthase Lsp1 OS=A... 85 7e-14
F2SK82_TRIRC (tr|F2SK82) tRNA pseudouridine synthase OS=Trichoph... 85 7e-14
E7KJC1_YEASA (tr|E7KJC1) tRNA pseudouridine synthase OS=Saccharo... 85 7e-14
B0XKE2_CULQU (tr|B0XKE2) tRNA pseudouridine synthase OS=Culex qu... 85 7e-14
I2GWA5_TETBL (tr|I2GWA5) tRNA pseudouridine synthase OS=Tetrapis... 85 7e-14
J9KAK1_ACYPI (tr|J9KAK1) tRNA pseudouridine synthase OS=Acyrthos... 85 7e-14
A8PRN9_BRUMA (tr|A8PRN9) tRNA pseudouridine synthase OS=Brugia m... 85 8e-14
F2RQJ1_TRIT1 (tr|F2RQJ1) tRNA pseudouridine synthase OS=Trichoph... 85 8e-14
I1G507_AMPQE (tr|I1G507) tRNA pseudouridine synthase OS=Amphimed... 85 9e-14
B8BZK0_THAPS (tr|B8BZK0) tRNA pseudouridine synthase (Fragment) ... 84 9e-14
F2PLY5_TRIEC (tr|F2PLY5) tRNA pseudouridine synthase OS=Trichoph... 84 9e-14
C4JEG8_UNCRE (tr|C4JEG8) Putative uncharacterized protein OS=Unc... 84 9e-14
D4AKR8_ARTBC (tr|D4AKR8) Putative uncharacterized protein OS=Art... 84 9e-14
N1JNC3_ERYGR (tr|N1JNC3) tRNA pseudouridine synthase OS=Blumeria... 84 1e-13
D4DFF0_TRIVH (tr|D4DFF0) Putative uncharacterized protein OS=Tri... 84 1e-13
J9MHK9_FUSO4 (tr|J9MHK9) tRNA pseudouridine synthase OS=Fusarium... 84 1e-13
E4UQ85_ARTGP (tr|E4UQ85) tRNA pseudouridine synthase 1 OS=Arthro... 84 1e-13
G7XHK1_ASPKW (tr|G7XHK1) tRNA pseudouridine synthase OS=Aspergil... 84 1e-13
A7EUA7_SCLS1 (tr|A7EUA7) Putative uncharacterized protein OS=Scl... 84 1e-13
M2LX45_9PEZI (tr|M2LX45) Uncharacterized protein OS=Baudoinia co... 84 1e-13
B8AGD8_ORYSI (tr|B8AGD8) Putative uncharacterized protein OS=Ory... 84 1e-13
Q6ESS0_ORYSJ (tr|Q6ESS0) Os02g0668400 protein OS=Oryza sativa su... 84 1e-13
I1P2Z2_ORYGL (tr|I1P2Z2) Uncharacterized protein OS=Oryza glaber... 84 1e-13
A9V1F3_MONBE (tr|A9V1F3) tRNA pseudouridine synthase OS=Monosiga... 84 1e-13
K9FWD4_PEND2 (tr|K9FWD4) TRNA pseudouridine synthase, putative O... 84 1e-13
K9FAN7_PEND1 (tr|K9FAN7) TRNA pseudouridine synthase, putative O... 84 1e-13
M4G955_MAGP6 (tr|M4G955) Uncharacterized protein OS=Magnaporthe ... 84 1e-13
F4NY14_BATDJ (tr|F4NY14) tRNA pseudouridine synthase OS=Batracho... 84 2e-13
H0GUT5_9SACH (tr|H0GUT5) tRNA pseudouridine synthase OS=Saccharo... 84 2e-13
G3XVB2_ASPNA (tr|G3XVB2) Putative uncharacterized protein OS=Asp... 84 2e-13
B6H289_PENCW (tr|B6H289) Pc13g04330 protein (Fragment) OS=Penici... 84 2e-13
F0XNJ4_GROCL (tr|F0XNJ4) tRNA pseudouridine synthase OS=Grosmann... 84 2e-13
J0DZV2_LOALO (tr|J0DZV2) tRNA pseudouridylate synthase Lsp1 OS=L... 84 2e-13
M2RKZ0_CERSU (tr|M2RKZ0) tRNA pseudouridine synthase OS=Ceripori... 84 2e-13
D8Q182_SCHCM (tr|D8Q182) Putative uncharacterized protein OS=Sch... 83 2e-13
G0VEK2_NAUCC (tr|G0VEK2) tRNA pseudouridine synthase OS=Naumovoz... 83 2e-13
Q172K2_AEDAE (tr|Q172K2) tRNA pseudouridine synthase OS=Aedes ae... 83 2e-13
G4TT12_PIRID (tr|G4TT12) Related to PUS1-pseudouridine synthase ... 83 2e-13
H0EJ85_GLAL7 (tr|H0EJ85) Putative tRNA pseudouridine synthase 1 ... 83 3e-13
G3MRJ2_9ACAR (tr|G3MRJ2) tRNA pseudouridine synthase OS=Amblyomm... 83 3e-13
J9D007_EDHAE (tr|J9D007) tRNA pseudouridine synthase OS=Edhazard... 83 3e-13
L1ID73_GUITH (tr|L1ID73) tRNA pseudouridine synthase OS=Guillard... 83 3e-13
A8PW23_MALGO (tr|A8PW23) tRNA pseudouridine synthase OS=Malassez... 83 3e-13
M0RSV4_MUSAM (tr|M0RSV4) Uncharacterized protein OS=Musa acumina... 83 3e-13
J5RE95_SACK1 (tr|J5RE95) tRNA pseudouridine synthase OS=Saccharo... 83 3e-13
E5A0Z7_LEPMJ (tr|E5A0Z7) Similar to tRNA pseudouridine synthase ... 82 4e-13
K2S2G2_MACPH (tr|K2S2G2) Pseudouridine synthase I TruA OS=Macrop... 82 4e-13
F8Q5B6_SERL3 (tr|F8Q5B6) Putative uncharacterized protein (Fragm... 82 4e-13
M3A104_9PEZI (tr|M3A104) Uncharacterized protein OS=Pseudocercos... 82 4e-13
R0LKY3_ANAPL (tr|R0LKY3) tRNA pseudouridine synthase A (Fragment... 82 4e-13
J7RK25_KAZNA (tr|J7RK25) Uncharacterized protein OS=Kazachstania... 82 4e-13
L0PEW5_PNEJ8 (tr|L0PEW5) tRNA pseudouridine synthase (Fragment) ... 82 4e-13
R7YRK1_9EURO (tr|R7YRK1) Uncharacterized protein OS=Coniosporium... 82 4e-13
G7DSZ4_MIXOS (tr|G7DSZ4) tRNA pseudouridine synthase OS=Mixia os... 82 4e-13
L7MAQ4_9ACAR (tr|L7MAQ4) tRNA pseudouridine synthase OS=Rhipicep... 82 5e-13
D8STK6_SELML (tr|D8STK6) tRNA pseudouridine synthase OS=Selagine... 82 5e-13
N1QIW7_9PEZI (tr|N1QIW7) Pseudouridine synthase OS=Mycosphaerell... 82 5e-13
F9X6C1_MYCGM (tr|F9X6C1) Uncharacterized protein OS=Mycosphaerel... 82 6e-13
C9SDK5_VERA1 (tr|C9SDK5) tRNA pseudouridine synthase OS=Verticil... 82 6e-13
N1P5H6_YEASX (tr|N1P5H6) Pus2p OS=Saccharomyces cerevisiae CEN.P... 82 6e-13
G3AP53_SPAPN (tr|G3AP53) tRNA pseudouridine synthase OS=Spathasp... 82 6e-13
H0GG93_9SACH (tr|H0GG93) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
E7QET9_YEASZ (tr|E7QET9) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
E7KNG5_YEASL (tr|E7KNG5) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
E7KCI0_YEASA (tr|E7KCI0) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
C8Z8I3_YEAS8 (tr|C8Z8I3) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
C7GW47_YEAS2 (tr|C7GW47) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
B5VIR1_YEAS6 (tr|B5VIR1) tRNA pseudouridine synthase (Fragment) ... 82 6e-13
B3LHD2_YEAS1 (tr|B3LHD2) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
A6ZUB3_YEAS7 (tr|A6ZUB3) tRNA pseudouridine synthase OS=Saccharo... 82 6e-13
G2WE33_YEASK (tr|G2WE33) tRNA pseudouridine synthase OS=Saccharo... 82 7e-13
I7I969_BABMI (tr|I7I969) tRNA pseudouridine synthase OS=Babesia ... 82 7e-13
E7Q3V4_YEASB (tr|E7Q3V4) tRNA pseudouridine synthase OS=Saccharo... 82 7e-13
C0NM44_AJECG (tr|C0NM44) tRNA pseudouridine synthase OS=Ajellomy... 82 7e-13
C1H9S4_PARBA (tr|C1H9S4) tRNA pseudouridine synthase OS=Paracocc... 82 7e-13
N1PRY6_MYCPJ (tr|N1PRY6) Uncharacterized protein OS=Dothistroma ... 82 7e-13
E7LUD8_YEASV (tr|E7LUD8) tRNA pseudouridine synthase OS=Saccharo... 81 7e-13
F0U8U8_AJEC8 (tr|F0U8U8) tRNA pseudouridine synthase OS=Ajellomy... 81 8e-13
C6H4R6_AJECH (tr|C6H4R6) tRNA pseudouridine synthase OS=Ajellomy... 81 8e-13
K5Y1K7_AGABU (tr|K5Y1K7) Uncharacterized protein OS=Agaricus bis... 81 8e-13
Q4X1X3_ASPFU (tr|Q4X1X3) tRNA pseudouridine synthase, putative O... 81 8e-13
B0XWD3_ASPFC (tr|B0XWD3) tRNA pseudouridine synthase, putative O... 81 8e-13
I1ICG1_BRADI (tr|I1ICG1) Uncharacterized protein OS=Brachypodium... 81 9e-13
F5H1S9_HUMAN (tr|F5H1S9) tRNA pseudouridine synthase OS=Homo sap... 81 9e-13
D8T562_SELML (tr|D8T562) tRNA pseudouridine synthase OS=Selagine... 81 1e-12
A1DGF0_NEOFI (tr|A1DGF0) TRNA pseudouridine synthase, putative O... 81 1e-12
I1JGM9_SOYBN (tr|I1JGM9) Uncharacterized protein OS=Glycine max ... 81 1e-12
L1JZP8_GUITH (tr|L1JZP8) tRNA pseudouridine synthase OS=Guillard... 81 1e-12
E4XB01_OIKDI (tr|E4XB01) tRNA pseudouridine synthase OS=Oikopleu... 81 1e-12
M5G5Z7_DACSP (tr|M5G5Z7) tRNA pseudouridine synthase OS=Dacryopi... 81 1e-12
I2CPF1_9STRA (tr|I2CPF1) tRNA pseudouridine synthase (Fragment) ... 80 1e-12
K1X899_MARBU (tr|K1X899) tRNA pseudouridine synthase A OS=Marsso... 80 1e-12
F2TFA1_AJEDA (tr|F2TFA1) tRNA pseudouridine synthase OS=Ajellomy... 80 1e-12
C5G800_AJEDR (tr|C5G800) tRNA pseudouridine synthase OS=Ajellomy... 80 1e-12
R0GHE2_9BRAS (tr|R0GHE2) Uncharacterized protein OS=Capsella rub... 80 1e-12
E4YY73_OIKDI (tr|E4YY73) tRNA pseudouridine synthase OS=Oikopleu... 80 2e-12
M7ZNB9_TRIUA (tr|M7ZNB9) tRNA pseudouridine synthase A, mitochon... 80 2e-12
A2QZ58_ASPNC (tr|A2QZ58) Putative uncharacterized protein An12g0... 80 2e-12
L9KWX3_TUPCH (tr|L9KWX3) tRNA pseudouridine synthase OS=Tupaia c... 80 2e-12
D8TUP7_VOLCA (tr|D8TUP7) Putative uncharacterized protein OS=Vol... 80 2e-12
F2EAU5_HORVD (tr|F2EAU5) Predicted protein OS=Hordeum vulgare va... 80 3e-12
F6H0D1_VITVI (tr|F6H0D1) tRNA pseudouridine synthase OS=Vitis vi... 80 3e-12
F7E3A6_HORSE (tr|F7E3A6) tRNA pseudouridine synthase (Fragment) ... 80 3e-12
N6TQ73_9CUCU (tr|N6TQ73) Uncharacterized protein (Fragment) OS=D... 80 3e-12
G1X4B0_ARTOA (tr|G1X4B0) Uncharacterized protein OS=Arthrobotrys... 80 3e-12
B6JVB2_SCHJY (tr|B6JVB2) tRNA pseudouridine synthase OS=Schizosa... 80 3e-12
Q5CPW7_CRYPI (tr|Q5CPW7) Pus1p-like type II pseudousynthas TruA ... 79 3e-12
N1R2D7_AEGTA (tr|N1R2D7) tRNA pseudouridine synthase A OS=Aegilo... 79 3e-12
H2YLR8_CIOSA (tr|H2YLR8) tRNA pseudouridine synthase OS=Ciona sa... 79 3e-12
M5EBW3_MALSM (tr|M5EBW3) Genomic scaffold, msy_sf_12 OS=Malassez... 79 3e-12
B9R8H6_RICCO (tr|B9R8H6) Pseudouridylate synthase, putative OS=R... 79 4e-12
A5AJY9_VITVI (tr|A5AJY9) Putative uncharacterized protein OS=Vit... 79 4e-12
C5Y1C3_SORBI (tr|C5Y1C3) Putative uncharacterized protein Sb04g0... 79 4e-12
A2E6F9_TRIVA (tr|A2E6F9) tRNA pseudouridine synthase OS=Trichomo... 79 4e-12
K7MW02_SOYBN (tr|K7MW02) tRNA pseudouridine synthase OS=Glycine ... 79 5e-12
E5GCD2_CUCME (tr|E5GCD2) tRNA pseudouridine synthase family prot... 79 5e-12
B4JUB5_DROGR (tr|B4JUB5) tRNA pseudouridine synthase OS=Drosophi... 79 5e-12
F6TLE4_CIOIN (tr|F6TLE4) tRNA pseudouridine synthase OS=Ciona in... 79 6e-12
C0P5B5_MAIZE (tr|C0P5B5) Uncharacterized protein OS=Zea mays PE=... 79 6e-12
A1CSQ9_ASPCL (tr|A1CSQ9) tRNA pseudouridine synthase, putative O... 78 6e-12
B6TLN6_MAIZE (tr|B6TLN6) tRNA pseudouridine synthase family prot... 78 6e-12
Q4UIU5_THEAN (tr|Q4UIU5) tRNA pseudouridine synthase OS=Theileri... 78 6e-12
J8Q272_SACAR (tr|J8Q272) tRNA pseudouridine synthase OS=Saccharo... 78 7e-12
I3J7E2_ORENI (tr|I3J7E2) tRNA pseudouridine synthase OS=Oreochro... 78 7e-12
B9AEI8_METSM (tr|B9AEI8) tRNA pseudouridine synthase A OS=Methan... 78 8e-12
R7PUR6_9EURY (tr|R7PUR6) tRNA pseudouridine synthase A OS=Methan... 78 9e-12
D2ZQ19_METSM (tr|D2ZQ19) tRNA pseudouridine synthase A OS=Methan... 78 9e-12
G7JGU0_MEDTR (tr|G7JGU0) Uncharacterized protein OS=Medicago tru... 78 1e-11
G7JGT6_MEDTR (tr|G7JGT6) tRNA pseudouridine synthase OS=Medicago... 78 1e-11
B7FLC8_MEDTR (tr|B7FLC8) Uncharacterized protein OS=Medicago tru... 78 1e-11
B7PNI3_IXOSC (tr|B7PNI3) tRNA pseudouridine synthase OS=Ixodes s... 77 1e-11
A4I1X8_LEIIN (tr|A4I1X8) Pseudouridylate synthase-like protein O... 77 1e-11
M4EAK5_BRARP (tr|M4EAK5) Uncharacterized protein OS=Brassica rap... 77 1e-11
H6C3D6_EXODN (tr|H6C3D6) tRNA pseudouridine synthase A OS=Exophi... 77 1e-11
Q29BR9_DROPS (tr|Q29BR9) tRNA pseudouridine synthase OS=Drosophi... 77 2e-11
B4GN12_DROPE (tr|B4GN12) tRNA pseudouridine synthase OS=Drosophi... 77 2e-11
B6Q940_PENMQ (tr|B6Q940) tRNA pseudouridine synthase, putative O... 77 2e-11
B4LWM8_DROVI (tr|B4LWM8) tRNA pseudouridine synthase OS=Drosophi... 77 2e-11
H6C3D7_EXODN (tr|H6C3D7) tRNA pseudouridine synthase A, variant ... 77 2e-11
Q5CJ80_CRYHO (tr|Q5CJ80) Uncharacterized protein OS=Cryptosporid... 77 2e-11
K0S0R9_THAOC (tr|K0S0R9) Uncharacterized protein OS=Thalassiosir... 77 2e-11
B3NYW6_DROER (tr|B3NYW6) tRNA pseudouridine synthase OS=Drosophi... 77 2e-11
E3WJI8_ANODA (tr|E3WJI8) tRNA pseudouridine synthase OS=Anophele... 76 2e-11
Q9LN29_ARATH (tr|Q9LN29) F14O10.3 protein OS=Arabidopsis thalian... 76 3e-11
M1AM30_SOLTU (tr|M1AM30) Uncharacterized protein OS=Solanum tube... 76 3e-11
B8M1I1_TALSN (tr|B8M1I1) tRNA pseudouridine synthase, putative O... 76 3e-11
E9BI54_LEIDB (tr|E9BI54) Pseudouridylate synthase-like protein O... 76 3e-11
K4BVT4_SOLLC (tr|K4BVT4) tRNA pseudouridine synthase OS=Solanum ... 76 3e-11
E9AY24_LEIMU (tr|E9AY24) Pseudouridylate synthase-like protein O... 76 4e-11
Q9SGS1_ARATH (tr|Q9SGS1) tRNA pseudouridine synthase OS=Arabidop... 76 4e-11
J4I810_FIBRA (tr|J4I810) tRNA pseudouridine synthase OS=Fibropor... 75 4e-11
Q3ECC9_ARATH (tr|Q3ECC9) tRNA pseudouridine synthase OS=Arabidop... 75 4e-11
D1JIP0_9ARCH (tr|D1JIP0) tRNA pseudouridine synthase A OS=uncult... 75 5e-11
G0WFT9_NAUDC (tr|G0WFT9) tRNA pseudouridine synthase OS=Naumovoz... 75 5e-11
Q7QC20_ANOGA (tr|Q7QC20) tRNA pseudouridine synthase OS=Anophele... 75 5e-11
Q4Q9E9_LEIMA (tr|Q4Q9E9) Pseudouridylate synthase-like protein O... 75 7e-11
G0TXU9_TRYVY (tr|G0TXU9) Putative pseudouridylate synthase I (Fr... 75 8e-11
K3YRG0_SETIT (tr|K3YRG0) Uncharacterized protein OS=Setaria ital... 75 8e-11
G8C233_TETPH (tr|G8C233) tRNA pseudouridine synthase OS=Tetrapis... 74 9e-11
B4IIA3_DROSE (tr|B4IIA3) tRNA pseudouridine synthase OS=Drosophi... 74 9e-11
B6AJ38_CRYMR (tr|B6AJ38) tRNA pseudouridine synthase OS=Cryptosp... 74 1e-10
R0GW67_9BRAS (tr|R0GW67) Uncharacterized protein OS=Capsella rub... 74 1e-10
G0UPJ0_TRYCI (tr|G0UPJ0) Putative pseudouridylate synthase I OS=... 74 1e-10
G0UVQ9_TRYCI (tr|G0UVQ9) Putative uncharacterized protein OS=Try... 74 1e-10
K2ND19_TRYCR (tr|K2ND19) Uncharacterized protein OS=Trypanosoma ... 74 1e-10
B4QS13_DROSI (tr|B4QS13) tRNA pseudouridine synthase OS=Drosophi... 74 1e-10
B3M0B3_DROAN (tr|B3M0B3) tRNA pseudouridine synthase OS=Drosophi... 74 1e-10
Q1XD12_PNECA (tr|Q1XD12) tRNA pseudouridine synthase (Fragment) ... 74 1e-10
E1JIR1_DROME (tr|E1JIR1) tRNA pseudouridine synthase OS=Drosophi... 74 1e-10
A4HEP8_LEIBR (tr|A4HEP8) Pseudouridylate synthase-like protein O... 74 2e-10
C1N6F4_MICPC (tr|C1N6F4) Predicted protein OS=Micromonas pusilla... 74 2e-10
H1UUC7_DROME (tr|H1UUC7) tRNA pseudouridine synthase (Fragment) ... 74 2e-10
L8GRN1_ACACA (tr|L8GRN1) tRNA pseudouridine synthase OS=Acantham... 74 2e-10
Q4DXJ9_TRYCC (tr|Q4DXJ9) Uncharacterized protein OS=Trypanosoma ... 74 2e-10
G8ZVY4_TORDC (tr|G8ZVY4) tRNA pseudouridine synthase OS=Torulasp... 74 2e-10
Q9VDK6_DROME (tr|Q9VDK6) tRNA pseudouridine synthase OS=Drosophi... 74 2e-10
G8BS98_TETPH (tr|G8BS98) tRNA pseudouridine synthase OS=Tetrapis... 74 2e-10
K4E2I1_TRYCR (tr|K4E2I1) Uncharacterized protein OS=Trypanosoma ... 74 2e-10
D7KJ10_ARALL (tr|D7KJ10) tRNA pseudouridine synthase family prot... 73 2e-10
B4K8F4_DROMO (tr|B4K8F4) tRNA pseudouridine synthase OS=Drosophi... 73 2e-10
D8LYC6_BLAHO (tr|D8LYC6) tRNA pseudouridine synthase OS=Blastocy... 73 2e-10
Q4D3D3_TRYCC (tr|Q4D3D3) Uncharacterized protein OS=Trypanosoma ... 73 2e-10
F0TB26_METSL (tr|F0TB26) tRNA pseudouridine synthase A OS=Methan... 73 3e-10
D2VUR4_NAEGR (tr|D2VUR4) tRNA pseudouridine synthase OS=Naegleri... 72 4e-10
H3G2C1_PRIPA (tr|H3G2C1) tRNA pseudouridine synthase OS=Pristion... 72 4e-10
C4VAT4_NOSCE (tr|C4VAT4) tRNA pseudouridine synthase OS=Nosema c... 72 4e-10
L0KUR1_METHD (tr|L0KUR1) tRNA pseudouridine synthase A OS=Methan... 72 4e-10
Q64EQ0_9ARCH (tr|Q64EQ0) tRNA pseudouridine synthase A OS=uncult... 72 4e-10
G0U5S0_TRYVY (tr|G0U5S0) Putative pseudouridylate synthase I OS=... 72 5e-10
F4S7W0_MELLP (tr|F4S7W0) Putative uncharacterized protein OS=Mel... 72 5e-10
>K7KAA8_SOYBN (tr|K7KAA8) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 516
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/450 (75%), Positives = 375/450 (83%), Gaps = 3/450 (0%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
+KWEPFLKK VVMRVGYVGTD+RGLQ+QRDEHRLST+EKELETAI+ AGG+RDSNFGDL+
Sbjct: 67 EKWEPFLKKKVVMRVGYVGTDFRGLQMQRDEHRLSTVEKELETAIFTAGGMRDSNFGDLN 126
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
KVKWGRSSRTDKGVHSLATMI+FKMEIPE+AWK D G+VLANRIN YLPNTIRVF ILP
Sbjct: 127 KVKWGRSSRTDKGVHSLATMIAFKMEIPENAWKGDDYGIVLANRINSYLPNTIRVFSILP 186
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S KRFDPRRECNLRKYSYLLPA IIGIQSHFS+DEIDFHISEFNS+L+ FEGEHPFHNYT
Sbjct: 187 STKRFDPRRECNLRKYSYLLPAGIIGIQSHFSQDEIDFHISEFNSILNVFEGEHPFHNYT 246
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVS---TTLGDKDQXX 288
VRSKYRKK+ R+S GN +MS++ G D DDFVS TT DK++
Sbjct: 247 VRSKYRKKYQVRQSSGNDVMSDRIGSSSLTSACESESEEGDDDDFVSGRPTTFSDKEESH 306
Query: 289 XXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVE 348
N S QNSS+VVRA+WLYEPDE DRLN SHFRK+ +CSCGKL+ LG DY+E
Sbjct: 307 KPPESSESNGLSSQNSSVVVRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYIE 366
Query: 349 IKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
+ IWGDSFMLHQIRKMVGTAVAVKRNLIPRD + LSL KF+RIVLPLAPPEVLILRGN F
Sbjct: 367 VHIWGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAF 426
Query: 409 SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKY 468
MR+SAG F R EMVS+VESE IL V+EFYTSV+LPE+SKFLDSS SPW +WVE LDKY
Sbjct: 427 KMRASAGNFTRQEMVSMVESEQILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKY 486
Query: 469 SSFADAELDEVRMAWRTWKENFRAKSASDA 498
SS DAELDEVR AW+TWKENFR KSAS A
Sbjct: 487 SSIPDAELDEVRKAWKTWKENFRLKSASKA 516
>I1JSA0_SOYBN (tr|I1JSA0) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 518
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/453 (73%), Positives = 372/453 (82%), Gaps = 6/453 (1%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
+KWEPFLKK VVMRVGYVGT++RGLQ+QRDEHRLSTIEKELETAI+ AGG+RDSNFGDL+
Sbjct: 66 EKWEPFLKKKVVMRVGYVGTNFRGLQMQRDEHRLSTIEKELETAIFMAGGMRDSNFGDLN 125
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
KVKWGRSSRTDKGVHSLAT+I+FKMEIPE+AWK D G+ LANRIN YLPNTIR+F ILP
Sbjct: 126 KVKWGRSSRTDKGVHSLATIIAFKMEIPENAWKGDDYGIALANRINSYLPNTIRIFSILP 185
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S KRFDPRRECNLRKYSYLLPADIIGIQSHFS+DEIDFHI EFNS+L+ FEGEHPFHNYT
Sbjct: 186 STKRFDPRRECNLRKYSYLLPADIIGIQSHFSQDEIDFHILEFNSILNVFEGEHPFHNYT 245
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXX---XXXXXXXDVDDFVS---TTLGDKD 285
VRSKYRKK+ R+S GN M ++ G D DDFVS TTL DK+
Sbjct: 246 VRSKYRKKYQVRQSSGNDGMPDRIGSSSLASACESESEESDDDDDDDFVSGRPTTLSDKE 305
Query: 286 QXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKD 345
+ N FS QNS++VVRA+WLYEPDE DRLN SHFRK+ +CSCGKL+ LG D
Sbjct: 306 ESHKPPESSESNGFSSQNSTVVVRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYD 365
Query: 346 YVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRG 405
YVE+ +WGDSFMLHQIRKMVGTAVAVKRNLIPRD + LSL KF+RIV PLAPPEVLILRG
Sbjct: 366 YVEVHVWGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVFPLAPPEVLILRG 425
Query: 406 NTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERL 465
N F MR+SAG F R EMVS+VESEPIL +EFYTSV+LPE+SKFLDSS SPW +WVE L
Sbjct: 426 NAFKMRASAGNFTRQEMVSMVESEPILKAADEFYTSVVLPEVSKFLDSSSSPWAKWVENL 485
Query: 466 DKYSSFADAELDEVRMAWRTWKENFRAKSASDA 498
DKYSS D ELDEVR AW+TWKENFR KS S+A
Sbjct: 486 DKYSSIPDVELDEVRKAWKTWKENFRVKSESEA 518
>G7KFJ6_MEDTR (tr|G7KFJ6) tRNA pseudouridine synthase OS=Medicago truncatula
GN=MTR_5g074620 PE=3 SV=1
Length = 483
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/447 (72%), Positives = 368/447 (82%), Gaps = 12/447 (2%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
+KW P+LKK VVMRVGY+GTD+RGLQIQR++H+LSTIEKELETAI+K GGIRDSN+GDLD
Sbjct: 49 EKWVPYLKKKVVMRVGYIGTDFRGLQIQRNDHKLSTIEKELETAIFKVGGIRDSNYGDLD 108
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ WGRSSRTDKGVHSL+TMISFKMEIPE+AWK D G+ +AN IN YLPN+IRVF +LP
Sbjct: 109 KINWGRSSRTDKGVHSLSTMISFKMEIPENAWKGDDYGIEMANHINSYLPNSIRVFSVLP 168
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S KRFDPR+EC++RKYSYLLPADIIG+QSHFSEDE DFHISEFNS+L AFEG+HPFHNYT
Sbjct: 169 STKRFDPRKECSMRKYSYLLPADIIGVQSHFSEDETDFHISEFNSILGAFEGDHPFHNYT 228
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
VRS YRKKHHARKSPGNG MSN TG D DD +S G+ +Q
Sbjct: 229 VRSVYRKKHHARKSPGNGGMSNMTGSSSLVSACDSENEESDTDDSMS---GNGEQ----- 280
Query: 292 XXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKI 351
+ S NS ++ARWL+EPD ADRLN SHFRKI +CSCGKL+ LLG +Y+EI +
Sbjct: 281 -SHKSQECSESNS---LKARWLHEPDAADRLNASHFRKILRCSCGKLETLLGYNYIEIDV 336
Query: 352 WGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMR 411
WGDSFMLHQIRKMVGTAVAVKRN IP+DI LSLIKF+RIVLP+APPEVLILRGN F M
Sbjct: 337 WGDSFMLHQIRKMVGTAVAVKRNSIPKDIFLLSLIKFSRIVLPIAPPEVLILRGNAFRMW 396
Query: 412 SSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSF 471
SS G + RPEMVS+VESE IL V+EFYTSVMLPELSKFLDSSKSPW +WVE+LDKYSS
Sbjct: 397 SSGGSYTRPEMVSMVESEQILKSVDEFYTSVMLPELSKFLDSSKSPWADWVEKLDKYSSI 456
Query: 472 ADAELDEVRMAWRTWKENFRAKSASDA 498
+ +L+EVR AWRTWKENFRAK AS+A
Sbjct: 457 PNDQLEEVREAWRTWKENFRAKPASEA 483
>A5C2V2_VITVI (tr|A5C2V2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_034891 PE=4 SV=1
Length = 602
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/460 (60%), Positives = 343/460 (74%), Gaps = 16/460 (3%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KWE F KK VVMRVGYVGT+YRGLQ+QRDE LSTIE ELETA++KAGGIRDSN+G+L K
Sbjct: 56 KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHK 115
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLATMIS KMEIP +AWKED +G+ LAN +N +LPN I+VF ILPS
Sbjct: 116 IGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPS 175
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC+LR+YSYLLPA+IIGI+S+ S EID HI+EFN +L+ FEGEHPF NYT+
Sbjct: 176 QRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTI 235
Query: 233 RSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL-GDKDQXXXXX 291
RSKYRK+ A++SPGNG + + + + V+ + D D+
Sbjct: 236 RSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQN 295
Query: 292 XXXXXNDFSH--------------QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGK 337
+ H Q+S LVVRARWL+ PDE DR++ SHFRKI CSCGK
Sbjct: 296 SSESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGK 355
Query: 338 LQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAP 397
L++ LG DYVE+ I G+SFMLHQIRKMVGTA+AVKR L+PRDIL+LSL KF+RIVLPLAP
Sbjct: 356 LEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAP 415
Query: 398 PEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSP 457
EVLILRGN+FS+R G RPEM++L+ESE IL V+EFYTSV+LP++SKFLD SKSP
Sbjct: 416 SEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSP 475
Query: 458 WVEWVERLDKYSSFADAELDEVRMAWRTWKENFRAKSASD 497
W +W+E L SS +AELD+VR AW+ WKENFR+++ +
Sbjct: 476 WHDWLENL-TLSSIPEAELDDVRTAWKLWKENFRSRTKCE 514
>F6GUG3_VITVI (tr|F6GUG3) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_06s0004g07710 PE=4 SV=1
Length = 516
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/457 (60%), Positives = 341/457 (74%), Gaps = 16/457 (3%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KWE F KK VVMRVGYVGT+YRGLQ+QRDE LSTIE ELETA++KAGGIRDSN+G+L K
Sbjct: 56 KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHK 115
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLATMIS KMEIP +AWKED +G+ LAN +N +LPN I+VF ILPS
Sbjct: 116 IGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPS 175
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC+LR+YSYLLPA+IIGI+S+ S EID HI+EFN +L+ FEGEHPF NYT+
Sbjct: 176 QRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTI 235
Query: 233 RSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL-GDKDQXXXXX 291
RSKYRK+ A++SPGNG + + + + ++ + D D+
Sbjct: 236 RSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQN 295
Query: 292 XXXXXNDFSH--------------QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGK 337
+ H Q+ LVVRARWL+ PDE DR++ SHFRKI CSCGK
Sbjct: 296 SSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGK 355
Query: 338 LQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAP 397
L++ LG DYVE+ I G+SFMLHQIRKMVGTA+AVKR L+PRDIL+LSL KF+RIVLPLAP
Sbjct: 356 LEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAP 415
Query: 398 PEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSP 457
EVLILRGN+FS+R G RPEM++L+ESE IL V+EFYTSV+LP++SKFLD SKSP
Sbjct: 416 SEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSP 475
Query: 458 WVEWVERLDKYSSFADAELDEVRMAWRTWKENFRAKS 494
W +W+E L SS +AELD+VR AW+ WKENFR+++
Sbjct: 476 WHDWLENL-TLSSIPEAELDDVRTAWKLWKENFRSRT 511
>M5WP30_PRUPE (tr|M5WP30) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004352mg PE=4 SV=1
Length = 515
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/454 (60%), Positives = 331/454 (72%), Gaps = 16/454 (3%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
+KW+ KK VV+RVGYVG+DYRGLQ+QRDEH LSTIEKELETAI+ AGGIRDSN G+L+
Sbjct: 54 EKWQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIRDSNLGNLN 113
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ W RSSRTDKGVHSLATMISFKMEIPE AW D G+ L N IN YLP+ I+VF ILP
Sbjct: 114 KIAWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHNIKVFSILP 173
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
+++ FDPR+ECNLR YSYLLPAD+IGI+SHFS EID+HIS+FNS+L+ FEGEHPFHNYT
Sbjct: 174 AQRSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEGEHPFHNYT 233
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXX-- 289
+RSKYR+K +KS +G +S TG ++F T + D
Sbjct: 234 IRSKYRRKLPVKKSRRHGSVS-ITGRSTGEASASESEESDVDENFDGTNTPESDAEVLNQ 292
Query: 290 -------------XXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCG 336
+ + Q++ V+RARWLYEPDE DR++ SHFRKI CSCG
Sbjct: 293 NSSPSSNSEGNLRNACEKQGDGGNDQSAGSVIRARWLYEPDERDRISASHFRKIFLCSCG 352
Query: 337 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 396
KL++ LG DYVE+ I G+SFMLHQIRKMVGTAVA+KR L+PRDIL+LSL F+RI+LPLA
Sbjct: 353 KLEKSLGHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAMFSRIILPLA 412
Query: 397 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKS 456
P EVL LRGN FS+R G RPEM+++VES I+ V+EFYTSVMLPE+SKFL+ S
Sbjct: 413 PSEVLFLRGNRFSIRGRPGNVTRPEMMAMVESGEIIKAVDEFYTSVMLPEVSKFLEPSGY 472
Query: 457 PWVEWVERLDKYSSFADAELDEVRMAWRTWKENF 490
PW EWVE LD+ + DAELDEVR AW+ WKE F
Sbjct: 473 PWKEWVENLDRNTGIPDAELDEVRNAWKVWKEKF 506
>K4CTC1_SOLLC (tr|K4CTC1) tRNA pseudouridine synthase OS=Solanum lycopersicum
GN=Solyc09g056260.2 PE=3 SV=1
Length = 496
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/446 (57%), Positives = 332/446 (74%), Gaps = 3/446 (0%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
+KWEPF+KK VVMRVGYVG+DYRGLQ+QRDEH+LSTIE ELE AI+KAGGIR+SNFG+L
Sbjct: 38 NKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLY 97
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ W RSSRTDKGVHSLATMIS KMEIP DAW++D +G+ LAN +N LP IRVF ILP
Sbjct: 98 KIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILP 157
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
SKKRFD RRECN RKYSYL+PA+IIGI++ + EI++HI+ FN +L++FEGEHPFHNYT
Sbjct: 158 SKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYT 217
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVD---DFVSTTLGDKDQXX 288
+RSKYRK+ AR N + K + + V T + ++Q
Sbjct: 218 IRSKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNA 277
Query: 289 XXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVE 348
+ NS + ++ARWL+EPD D+L+ +HFR+I C CGKL++LLG +YVE
Sbjct: 278 EGNCNLKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVE 337
Query: 349 IKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
+ I G+SFMLHQIRKMVGTAVA+KRNL+P D L +SL KF+RIVLPLAP EVL+L+GN F
Sbjct: 338 VSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNF 397
Query: 409 SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKY 468
++R+ G IRPEM++L+ES+ IL V++FY S +LP+LS+FLD SKSPW EWVE LD
Sbjct: 398 ALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDAN 457
Query: 469 SSFADAELDEVRMAWRTWKENFRAKS 494
+S D +L+EVR+AW+ WK + +++
Sbjct: 458 TSIPDYQLEEVRVAWKLWKAQYDSRT 483
>G7KFJ8_MEDTR (tr|G7KFJ8) Pseudouridylate synthase OS=Medicago truncatula
GN=MTR_5g074640 PE=4 SV=1
Length = 501
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 324/445 (72%), Gaps = 10/445 (2%)
Query: 54 WEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
W+PF KK VVMR+ Y GT+YRGLQ+QRD++ LST+EKELE+AI+KAGGIR+SN GDL+K+
Sbjct: 51 WQPFRKKKVVMRIAYTGTNYRGLQMQRDQNSLSTVEKELESAIFKAGGIRESNLGDLEKI 110
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
W RSSRTDKGVHSLATM++FKMEIPE++W ED G LAN +N YLP I+V ILP++
Sbjct: 111 GWARSSRTDKGVHSLATMVAFKMEIPENSWNEDPFGFALANYVNSYLPCDIKVISILPAQ 170
Query: 174 KRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVR 233
+ FDPR+EC LRKYSYLLPADIIGIQSH S DEID+H+SEFN +L FEG HPFHNYT R
Sbjct: 171 RSFDPRKECVLRKYSYLLPADIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPFHNYTSR 230
Query: 234 SKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL--------GDKD 285
S+YR+ H + P + VD+ ++ + G D
Sbjct: 231 SRYRR--HIPRRPSHSKCGEILSAYNSEQEDSDEEENFKVDEALTGNIECQNQKSSGTSD 288
Query: 286 QXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKD 345
+ Q+SS VVRA+WLYEPDEADRLN SHFR++ +CS GKL++ +G
Sbjct: 289 SCEPVIETGNKGNLHDQSSSSVVRAKWLYEPDEADRLNASHFRRVFRCSSGKLEKSMGHS 348
Query: 346 YVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRG 405
Y+EI I G+SFMLHQIRKMV TAVAVKR L+PRDI++LSL KF+RI+LPLAP EVL+LRG
Sbjct: 349 YIEIYIEGESFMLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRG 408
Query: 406 NTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERL 465
N+FSMR+ G RPEM ++VESE I V++FY SVMLP++SKFLD S+ PWVEW+E+
Sbjct: 409 NSFSMRTKPGNVTRPEMQTIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKF 468
Query: 466 DKYSSFADAELDEVRMAWRTWKENF 490
D ++S + +LDEVR A WKENF
Sbjct: 469 DAHTSIPNDQLDEVRKARNLWKENF 493
>K7KAB0_SOYBN (tr|K7KAB0) tRNA pseudouridine synthase OS=Glycine max PE=3 SV=1
Length = 493
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 327/454 (72%), Gaps = 12/454 (2%)
Query: 54 WEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
W+P KK V M V YVGT+YRGLQ+Q DEH LSTIEKELETAI+KAGGIR+SNFGDL K+
Sbjct: 39 WQPSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKI 98
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
W RSSRTDKGVHSLAT+ISFKMEIPE+AW D G LAN +N YLP I+V ILPS+
Sbjct: 99 GWARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQ 158
Query: 174 KRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVR 233
+ FDPR+EC LRKYSYLLPA+IIGIQSHFS DE+D+HISEFN +L+ FEG HPFHNYT R
Sbjct: 159 RSFDPRKECILRKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFEGIHPFHNYTAR 217
Query: 234 SKYRKKHHARKSPG-NGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX- 291
SKYRK+ R+S +G + ++ + D+ + + + Q
Sbjct: 218 SKYRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENIVCQSQKFSETH 277
Query: 292 ---------XXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
N Q+S LV RARWLYEPDEADRL+ SHFRK+ QCSCGKL+ L
Sbjct: 278 HFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSL 337
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +Y+EI I G+SFMLHQIRKMVGTAVAVKR +P+DI+ LSL +F+RI+LPLAP E LI
Sbjct: 338 GYNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALI 397
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LRGN FS+R+ G RPEM ++V+SE I V++FYTSVMLP++SK LD S+SPW EW+
Sbjct: 398 LRGNRFSIRTRPGNITRPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWI 457
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENFRAKSAS 496
E+LD ++S + +LDEVR AW +KE F +++
Sbjct: 458 EKLDAHTSIPNDQLDEVRKAWNLFKEKFETTTST 491
>B9I6V0_POPTR (tr|B9I6V0) tRNA pseudouridine synthase (Fragment) OS=Populus
trichocarpa GN=POPTRDRAFT_239920 PE=3 SV=1
Length = 445
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/439 (59%), Positives = 325/439 (74%), Gaps = 23/439 (5%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KWE KK V +RVGYVGTDYRGLQ Q D+H L TIE ELE AIY+AGGIR+SN+G+L+K
Sbjct: 25 KWESIRKKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYEAGGIRESNYGNLNK 84
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLAT I+ KMEIPE+AWK+D G+VLA +N YLP++IRV ILP+
Sbjct: 85 ISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPA 144
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
+K FDPRREC++RKYSYLLPA++IGI+SHFS EID HIS+FN++L+AFEG+HPFHNYTV
Sbjct: 145 QKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTV 204
Query: 233 RSKYRKKH-----HARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQX 287
RSKYR+K+ H K + ++ +G + D L D
Sbjct: 205 RSKYRRKYPTKNGHVSKRARSSWGTSASGSEENHVELSQNSLESSICDLNGDILKD---- 260
Query: 288 XXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYV 347
Q+S+L +RARWL+EPDE DR+ +HFRKI +CSCGKL++ LG D+V
Sbjct: 261 --------------QSSNLPLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFV 306
Query: 348 EIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNT 407
EI IWG+SFMLHQIRKMVGTAVAVKR ++PRD++ LSL KF+RIVLPLAP EVLILRGN
Sbjct: 307 EISIWGESFMLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGND 366
Query: 408 FSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDK 467
FS+R +G+ RPEM ++VESE IL V EFY+++MLP++SKFLD W EWVE LDK
Sbjct: 367 FSLRKKSGEGKRPEMETMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDK 426
Query: 468 YSSFADAELDEVRMAWRTW 486
Y+S DA+LDEVR+A + W
Sbjct: 427 YTSIPDAQLDEVRIARKVW 445
>M0TC53_MUSAM (tr|M0TC53) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 595
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/448 (58%), Positives = 315/448 (70%), Gaps = 12/448 (2%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+W+ F KK VVMRVGYVGTDYRGLQ QRD H LSTIE ELE+AIYKAGGI DSNFG L K
Sbjct: 143 RWDSFRKKKVVMRVGYVGTDYRGLQKQRDAHALSTIEAELESAIYKAGGILDSNFGHLHK 202
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIPE AWKED G+VLAN +N LP+ ++VF +LPS
Sbjct: 203 VGWARSSRTDKGVHSLATMISLKMEIPEHAWKEDPSGIVLANYVNSNLPSNVKVFSVLPS 262
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
+K FD RREC LR YSYLLPA+IIGI++ S E+ H+SEF ++L FEGEHPFHNYTV
Sbjct: 263 QKHFDARRECTLRMYSYLLPAEIIGIKNDCSSAEVAEHLSEFGNILKGFEGEHPFHNYTV 322
Query: 233 RSKYRK----KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDV------DDFVSTTLG 282
RSKYRK K +RK + + +K DV ++F+ +
Sbjct: 323 RSKYRKPPPGKRDSRKR--SRLTEDKLASGVEDSDDVGNFPVEDVAKDKPEENFILSCNT 380
Query: 283 DKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
D D+ N + VRARWL+EPDE DRLN SHFRKI SCG L+ L
Sbjct: 381 DSDEEVYESSEQESNQIKNFGVPSPVRARWLHEPDEMDRLNASHFRKIFGFSCGNLETSL 440
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +YVE+ I G+SFMLHQIRKMVGTAVAVKR L+P+DI+ +SL KF+RIVLPLAP EVLI
Sbjct: 441 GINYVELSICGESFMLHQIRKMVGTAVAVKRGLLPKDIIEMSLAKFSRIVLPLAPSEVLI 500
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LR N +++R G RPEM ++ ES+ I V+EFY+SV+LP++SKFLD SKSPW EWV
Sbjct: 501 LRSNRYAIRGHPGNITRPEMKTMTESQEIQGAVDEFYSSVLLPKVSKFLDPSKSPWQEWV 560
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENF 490
+ L+ Y+S +D ELDEVR W WKE F
Sbjct: 561 DNLETYTSISDEELDEVRKPWNVWKEGF 588
>D7LBM5_ARALL (tr|D7LBM5) tRNA pseudouridine synthase family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481943
PE=4 SV=1
Length = 507
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/439 (56%), Positives = 306/439 (69%), Gaps = 17/439 (3%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
DKWE + KK VV+R+GYVGTDYRGLQIQRD+ L TIE ELE AIYKAGGIRDSN+GDL
Sbjct: 55 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSLKTIEGELEVAIYKAGGIRDSNYGDLH 114
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ W RSSRTDKGVHSLAT IS KMEIPE AWK+D G VLA I+ +LP IRVF +LP
Sbjct: 115 KIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLP 174
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S +RFDPRREC LRKYSYLLP D+IGI++ F+ DEID+HI++FN +L+ FEGE+PFHNYT
Sbjct: 175 SNRRFDPRRECTLRKYSYLLPVDVIGIKNSFTSDEIDYHITDFNKILNEFEGEYPFHNYT 234
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
RS+YR+K + NG +F + ++
Sbjct: 235 QRSRYRRKSEQKIKQRNG-----------RPPRIPKSIKASESEFTEENHREIEEEEEKE 283
Query: 292 XXXXXNDF---SHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVE 348
++ NS + RA+WLYEPDE D+L+ +HFRK+ +C GKL+ LG +VE
Sbjct: 284 MDGESDEHVPPDSDNSQVNSRAKWLYEPDETDKLSGAHFRKVFRCRSGKLENSLGFGFVE 343
Query: 349 IKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
I IWG+SFMLHQIRKM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F
Sbjct: 344 ISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSF 403
Query: 409 SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKY 468
+R RP M + ESE + ++EEFY +VM+P++S+FLDS KSPW EWVE LD+
Sbjct: 404 EVRRLPE---RPGMEATGESEEVEKDIEEFYRAVMVPQVSRFLDSEKSPWKEWVEHLDRN 460
Query: 469 SSFADAELDEVRMAWRTWK 487
D EL++VR W WK
Sbjct: 461 DGLIDEELEDVRKGWEEWK 479
>G8GJ72_LINUS (tr|G8GJ72) Putative pseudouridine synthase family protein OS=Linum
usitatissimum PE=4 SV=1
Length = 565
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/434 (57%), Positives = 313/434 (72%), Gaps = 13/434 (2%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KW P KK VV+RVGYVGTDYRGLQ Q DEH LST+E ELE AI+KAGGI +SN+G L+K
Sbjct: 108 KWVPIRKKKVVLRVGYVGTDYRGLQKQHDEHSLSTVEAELENAIFKAGGILESNYGHLNK 167
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLAT I+ KMEIPE AWK+D G+ LA +N YLP++IR+F ILP+
Sbjct: 168 VAWARSSRTDKGVHSLATTITMKMEIPETAWKDDPYGIALARTVNSYLPDSIRIFSILPA 227
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
+K FDPR ECN+RKYSYLLPA+IIGI+SH DEI HIS+F +L+AFEG+HPFHNYT+
Sbjct: 228 QKNFDPRLECNMRKYSYLLPAEIIGIRSHSDADEISEHISDFRKILNAFEGDHPFHNYTI 287
Query: 233 RSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXD---VDDFVSTTLGDKDQXXX 289
RSKYR + P +K + VD+ V L + +Q
Sbjct: 288 RSKYRSQIRRNTFPEKNYHFSKRDRAFIQIGDPVSEGSDEEEGVDEIVQ--LDNSNQNIE 345
Query: 290 XXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEI 349
HQ+S +V ARWL EPDE DR+ SHFRKI +CSCG+L++ G ++VEI
Sbjct: 346 PVK-------DHQSSGQLV-ARWLXEPDERDRIGASHFRKIIRCSCGELEKSSGYNFVEI 397
Query: 350 KIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS 409
IWG+SFMLHQIRKMVGTAVAVKR+L+PRDIL+LSL KF+RIVLPLAP EVLILRGN++S
Sbjct: 398 SIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRIVLPLAPSEVLILRGNSYS 457
Query: 410 MRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYS 469
+ + + R E+ ++ E+E IL V+EFY +LP++SKFLD S SPW+EWVE+LD+++
Sbjct: 458 LTRKSREGTRSEVQTMSEAEEILKGVDEFYVDKLLPQVSKFLDPSSSPWLEWVEKLDEHT 517
Query: 470 SFADAELDEVRMAW 483
DAEL+E R A+
Sbjct: 518 HIPDAELNEERPAF 531
>R0HSD1_9BRAS (tr|R0HSD1) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10023036mg PE=4 SV=1
Length = 508
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/439 (56%), Positives = 308/439 (70%), Gaps = 18/439 (4%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
DKWE + KK VV+R+GYVGTDYRGLQIQRD+ + TIE ELE AIYKAGGIRDSN+GDL
Sbjct: 56 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPAIKTIEGELEVAIYKAGGIRDSNYGDLH 115
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ W RSSRTDKGVHSLAT IS KMEIPE AWK+D G+VLA I+ +LP IRVF +LP
Sbjct: 116 KIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGIVLAKCISKHLPENIRVFSVLP 175
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S +RFDPRREC LRKYSYLLP D+IGI+S+F+ DEID+HI++FN +L FEGE+PFHNYT
Sbjct: 176 SNRRFDPRRECTLRKYSYLLPVDVIGIKSNFTSDEIDYHITDFNEILKEFEGEYPFHNYT 235
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
RS+YR+K + NG + +F + ++
Sbjct: 236 QRSRYRRKSEQKLKQRNGRPPKEPKSVKASET-----------EFAEENHREIEEEEEEE 284
Query: 292 XXXXXNDFSH--QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEI 349
H NS + RA+WLYEPDE D+L+ +HFRK+ +C GKL+ LG +VEI
Sbjct: 285 KEVDGESDEHFSDNSQVNTRAKWLYEPDETDKLSGAHFRKVFRCRSGKLESSLGFRFVEI 344
Query: 350 KIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS 409
IWG+SFMLHQIRKM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F
Sbjct: 345 SIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFE 404
Query: 410 MRSSAGKFIRPEMVSLV-ESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKY 468
+R +F + ++V ESE + E+EEFY +VM+P++S+FLDS K+PW EW+E LD+
Sbjct: 405 VR----RFPQRQVVEAPGESEEVEKEIEEFYRAVMVPQVSRFLDSEKAPWAEWLEHLDRN 460
Query: 469 SSFADAELDEVRMAWRTWK 487
D EL +VR W WK
Sbjct: 461 DGLIDEELKDVRRGWEEWK 479
>M4E1Y9_BRARP (tr|M4E1Y9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra022789 PE=4 SV=1
Length = 505
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 308/441 (69%), Gaps = 7/441 (1%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
DKWE + KK VV+R+GYVGTDYRGLQIQRD+ L TIE ELE AIYKAGGI +SN+GDL
Sbjct: 47 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSLKTIEGELEVAIYKAGGILESNYGDLH 106
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ W RSSRTDKGVHSLAT IS KMEIPE AWK+D G LA I+ +LP+ IRVF +LP
Sbjct: 107 KIGWARSSRTDKGVHSLATTISLKMEIPETAWKDDPHGTALAKCISKHLPDNIRVFSVLP 166
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
S++RFDPRREC LR YSYLLP D+IG+++ FS DEID H+S+FN +L FEG++PFHNYT
Sbjct: 167 SQRRFDPRRECTLRMYSYLLPVDVIGVKNSFSSDEIDHHLSDFNEILKQFEGDYPFHNYT 226
Query: 232 VRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXX 291
RSKYR+K + + NG K + + + +
Sbjct: 227 QRSKYRRKSQQKITHRNGRPPKKP------KSIQASEFTEENNRENEEEKVEGEGEEEEE 280
Query: 292 XXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKI 351
++ NS +RA+WL+EPDE D+L+ +HFRK+ +CSCG L+ LG +VEI I
Sbjct: 281 ADGEESNEDVANSQAYIRAKWLHEPDETDKLSAAHFRKVFRCSCGNLESSLGFGFVEISI 340
Query: 352 WGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMR 411
WG+SFMLHQIRKM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F +
Sbjct: 341 WGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVP 400
Query: 412 SSAGKF-IRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSS 470
S F RPE+ ++ ESE + EVEEFY VM+P++S+FLDS ++PW EW+E L++
Sbjct: 401 KSPANFRRRPEIKAMGESEEVEREVEEFYRGVMVPQVSRFLDSEEAPWKEWLEHLERNDG 460
Query: 471 FADAELDEVRMAWRTWKENFR 491
D +L++VR W WK R
Sbjct: 461 MIDEQLEDVRRGWEEWKAKPR 481
>I1H5P7_BRADI (tr|I1H5P7) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI1G63050 PE=4 SV=1
Length = 522
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/454 (52%), Positives = 311/454 (68%), Gaps = 19/454 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVG++YRGLQ QR+ STIE LE+AI+KAGGI +SN+G L K
Sbjct: 70 RWESTRKKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGILESNYGKLQK 129
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ LAN IN LPN I+VF ILP+
Sbjct: 130 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNNIKVFSILPA 189
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+IIGI+S S +E++ H+ EFNS+L FEG HPFHNYT
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTA 249
Query: 233 RSKYRK---KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDD-------FVSTTLG 282
R+KYRK H R + +++ D DD V ++L
Sbjct: 250 RAKYRKVLAGAHRRSKETSSTINSIPSELAVDQSPNDDGATSDADDEHLNFSSVVDSSLP 309
Query: 283 DKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
+ D ++ H + + ++ARWL+EP+E DRL+ SHFR I CSCG+LQ
Sbjct: 310 ENDW--------NKDNPKHHENHVQIQARWLHEPNENDRLSASHFRDIITCSCGELQSSS 361
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +VE+ I G SFMLHQIRKMVGTAVAVKR L+P++I+ LSL KF+RIVLP+AP EVLI
Sbjct: 362 GIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLPIAPSEVLI 421
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LR N+F R+ G +RP + S+ ES+ + V EFY + ++PEL+K+LD+S+ PW EWV
Sbjct: 422 LRDNSFCTRNKQGSIVRPGIQSINESKEVKKGVMEFYKAALVPELAKYLDASEPPWEEWV 481
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
E LD ++S D++LDEVR A+ W+E++ RAK+A
Sbjct: 482 ENLDHFTSIPDSQLDEVRTAYTAWREDYIRAKTA 515
>K4A8J3_SETIT (tr|K4A8J3) Uncharacterized protein OS=Setaria italica
GN=Si035199m.g PE=4 SV=1
Length = 519
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/453 (53%), Positives = 312/453 (68%), Gaps = 19/453 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LE+AI+KAGGI +SN+G L K
Sbjct: 69 RWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILESNYGKLQK 128
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ LA+ IN LPN +RVF ILP+
Sbjct: 129 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILPA 188
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+ IGI+ S +E+ H+SEFNS+L FEG HPFHNYT
Sbjct: 189 QRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYTA 248
Query: 233 RSKYRK--KHHARKSPGNGI----MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL--GDK 284
R+KYRK R+ G + MS++TG D D +S+ + G +
Sbjct: 249 RAKYRKVLAGSHRRVKGACLPLKSMSSETG-MEENSSEDNTPSDHDEDLNISSMIDSGVE 307
Query: 285 DQXXXXXXXXXXNDFS-HQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLG 343
D ND + H + + ++ARWLYEPDE+DRLN SHFR I CSCG+LQ G
Sbjct: 308 DN--------CLNDVAKHFGNQVQIQARWLYEPDESDRLNASHFRDIITCSCGELQSSSG 359
Query: 344 KDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 403
+VE+ I G SFMLHQIRKMVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLIL
Sbjct: 360 IQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLIL 419
Query: 404 RGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVE 463
R N+F ++ G+ +RP + S+ +S + V EFY + +LPEL+KFLD S PW EWVE
Sbjct: 420 RDNSFCTKNKEGRLVRPGIESMNKSAEVRKGVTEFYKAALLPELAKFLDPSMPPWKEWVE 479
Query: 464 RLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
LD++++ D++LDEVR A++ WK ++ R K A
Sbjct: 480 NLDQFATIPDSQLDEVREAYKIWKADYDRVKMA 512
>C5X0R7_SORBI (tr|C5X0R7) Putative uncharacterized protein Sb01g035980 OS=Sorghum
bicolor GN=Sb01g035980 PE=4 SV=1
Length = 520
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/445 (52%), Positives = 304/445 (68%), Gaps = 14/445 (3%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+R+GY+GT+YRGLQ QR+ STIE LE+AI+K+GGI +SN+G L K
Sbjct: 70 RWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGILESNYGKLQK 129
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW++D DG+ LA+ IN LP+ +RVF ILP+
Sbjct: 130 VGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA++IGI+ +S +EI H+SEFNS+L FEG HPFHNYT
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGNHPFHNYTA 249
Query: 233 RSKYRKKHHARKSPGNGI------MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQ 286
R+KYRK R G MS++ G + + S G +
Sbjct: 250 RAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSLESTSSDDDEDLNISSIDSGASEN 309
Query: 287 XXXXXXXXXXND-FSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKD 345
ND S + ++ARWL+EPDE+DRLN SHFR I CSCG+LQ G
Sbjct: 310 -------IFVNDILKFSESRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSGIQ 362
Query: 346 YVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRG 405
+VE+ I G SFMLHQIRKMVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLIL+
Sbjct: 363 FVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILKD 422
Query: 406 NTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERL 465
N+F +S G+ +RP + S+ +S I VEEFY + +LPE++KFLD + PW EWVE L
Sbjct: 423 NSFCTKSKEGRIVRPGIQSMNKSAAIRKGVEEFYKAALLPEVAKFLDPAVPPWKEWVENL 482
Query: 466 DKYSSFADAELDEVRMAWRTWKENF 490
D+++ +D++LDEVR A+R WK ++
Sbjct: 483 DRFAGISDSQLDEVREAYRAWKADY 507
>J3LNL0_ORYBR (tr|J3LNL0) Uncharacterized protein OS=Oryza brachyantha
GN=OB03G26360 PE=4 SV=1
Length = 518
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/450 (52%), Positives = 306/450 (68%), Gaps = 23/450 (5%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LETAI+K GGI +SN+G L K
Sbjct: 67 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKTGGILESNYGKLQK 126
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF ILP+
Sbjct: 127 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSILPA 186
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD R+EC R Y YL+PA+IIGI+ S DE+ H+SEFN +L FEG HPFHNYT
Sbjct: 187 QRSFDVRKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGNHPFHNYTA 246
Query: 233 RSKYRK----KHHARKSPGNGI--MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQ 286
R+KYRK +H K + + MS+K G DD S+ ++D
Sbjct: 247 RAKYRKVLAGRHRKVKRASSAVNSMSSKMGMEGISS-----------DDGTSSDHDEEDL 295
Query: 287 XXXXXXXXXXNDFSHQNS------SLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQR 340
+ S+++S + +RARWL+EPDE DRLN SHFR I SCG+LQ
Sbjct: 296 NSSSLIGSSAPENSYKDSPELSKKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQS 355
Query: 341 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 400
G +VE+ I G SFMLHQIRKMVGTAVAVKR L+P+DI++LSL KF+RIVLP+AP EV
Sbjct: 356 SSGMQFVELTISGVSFMLHQIRKMVGTAVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEV 415
Query: 401 LILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVE 460
LILR N+F +++ G +RP + S+ ESE + V EFY + +LPEL+ FLD+S PW E
Sbjct: 416 LILRDNSFCLKNKQGSIVRPGIQSMNESEEVKKGVMEFYKAALLPELANFLDASMPPWKE 475
Query: 461 WVERLDKYSSFADAELDEVRMAWRTWKENF 490
WVE LD+++S D++L+E+R A+R WK ++
Sbjct: 476 WVENLDQFTSIPDSQLEEIRSAYRVWKADY 505
>I1PB50_ORYGL (tr|I1PB50) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 516
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 308/454 (67%), Gaps = 20/454 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LETAI+KAGGI +SN+G L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF +LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSVLPA 184
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+IIGI+ S +E+ H+SEFNS+L FEG HPFHNYT
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244
Query: 233 RSKYRK----KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXX 288
R+KYRK +H K + + S T DD ++ ++D
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPT---------EMSLDQSSSDDGTTSDHDEEDLNS 295
Query: 289 XXXXXXXXNDFSHQNS------SLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
+ S++++ + +RARWL+EPDE DRLN SHFR I SCG+LQ
Sbjct: 296 SSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +VE+ I G SFMLHQIRKMVGT+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+
Sbjct: 356 GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLTKFSRIVLPIAPSEVLV 415
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LR N+F +R+ G +RP + S+ ESE + V EFY + ++PEL+ FLD+S PW EWV
Sbjct: 416 LRDNSFCLRNKQGTIVRPGIQSMNESEEVKKGVMEFYRAALVPELANFLDASMPPWKEWV 475
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
E LD+++S D +L+EVR A+R WK ++ R K A
Sbjct: 476 ENLDRFTSIPDPQLEEVRSAYRVWKADYDRVKMA 509
>Q10LR0_ORYSJ (tr|Q10LR0) Os03g0338600 protein OS=Oryza sativa subsp. japonica
GN=Os03g0338600 PE=4 SV=1
Length = 516
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 308/454 (67%), Gaps = 20/454 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LETAI+KAGGI +SN+G L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF +LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+IIGI+ S +E+ H+SEFNS+L FEG HPFHNYT
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244
Query: 233 RSKYRK----KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXX 288
R+KYRK +H K + + S T DD ++ ++D
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPT---------EMSLDQSSSDDGTTSDHDEEDLNS 295
Query: 289 XXXXXXXXNDFSHQNS------SLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
+ S++++ + +RARWL+EPDE DRLN SHFR I SCG+LQ
Sbjct: 296 SSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +VE+ I G SFMLHQIRKMVGT+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+
Sbjct: 356 GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LR N+F +R+ G +RP + S+ ESE + V EFY + ++PEL+ FLD+S PW EWV
Sbjct: 416 LRDNSFCLRNKQGTIVRPGIQSMNESEEVKKGVMEFYRAALVPELANFLDASMPPWKEWV 475
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
E LD+++S D +L+EVR A+R WK ++ R K A
Sbjct: 476 ENLDRFTSIPDPQLEEVRSAYRVWKADYDRVKMA 509
>A3AHR5_ORYSJ (tr|A3AHR5) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_10771 PE=2 SV=1
Length = 516
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 308/454 (67%), Gaps = 20/454 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LETAI+KAGGI +SN+G L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF +LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+IIGI+ S +E+ H+SEFNS+L FEG HPFHNYT
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244
Query: 233 RSKYRK----KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXX 288
R+KYRK +H K + + S T DD ++ ++D
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPT---------EMSLDQSSSDDGTTSDHDEEDLNS 295
Query: 289 XXXXXXXXNDFSHQNS------SLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL 342
+ S++++ + +RARWL+EPDE DRLN SHFR I SCG+LQ
Sbjct: 296 SSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G +VE+ I G SFMLHQIRKMVGT+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+
Sbjct: 356 GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
LR N+F +R+ G +RP + S+ ESE + V EFY + ++PEL+ FLD+S PW EWV
Sbjct: 416 LRDNSFCLRNKQGTIVRPGIQSMNESEEVKKGVMEFYRAALVPELANFLDASMPPWKEWV 475
Query: 463 ERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
E LD+++S D +L+EVR A+R WK ++ R K A
Sbjct: 476 ENLDRFTSIPDPQLEEVRSAYRVWKADYDRVKMA 509
>B4FLR5_MAIZE (tr|B4FLR5) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 516
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/452 (52%), Positives = 307/452 (67%), Gaps = 16/452 (3%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+R+GYVGTDYRGLQ Q++ STIE LE+AI+K+GGI +SN+G L K
Sbjct: 70 RWESARKKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQK 129
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLATMIS KMEIP+ AW++D DG+ LA+ IN LP+ +RVF ILP+
Sbjct: 130 IGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ FD RREC R+Y YLLPA+IIGI+ +S +E+ H+SEFN +L FEG HPFHNYT
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTA 249
Query: 233 RSKYRK----KHHARKSPGNGI--MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL--GDK 284
R+KYRK +H K + + MS+ TG D D +S+ G
Sbjct: 250 RAKYRKVLAGRHRRAKGASSALKSMSSDTG-MAESSSEESTSPDHDEDLNISSIFDSGIP 308
Query: 285 DQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGK 344
+ D L ++ARWL+EPDE+DRLN SHFR I CSCG LQ G
Sbjct: 309 EDTRVNGILKLSED------RLQIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSSGI 362
Query: 345 DYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILR 404
+VE+ I G SFMLHQIRKMVGTAV VKR L+PRDI+ LSL KF+RIVLP+AP EVL+L+
Sbjct: 363 QFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLVLK 422
Query: 405 GNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVER 464
N+F +S G+ +RP + S+ +SE VEEFY + +LPE++KFLD S PW EW+E
Sbjct: 423 DNSFCTKSKGGRIVRPGIQSMNKSEATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWLEN 482
Query: 465 LDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
LD++S ++LDEVR A+R W++++ RAK A
Sbjct: 483 LDRFSGIPGSQLDEVREAYRAWRDDYDRAKMA 514
>M7ZGK9_TRIUA (tr|M7ZGK9) Putative tRNA pseudouridine synthase OS=Triticum urartu
GN=TRIUR3_21849 PE=4 SV=1
Length = 450
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/415 (51%), Positives = 276/415 (66%), Gaps = 5/415 (1%)
Query: 85 LSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWK 144
+TIE LE+AI+KAGGI +SN+G L KV W RSSRTDKGVHSLATMIS KMEIP+ AW+
Sbjct: 30 CTTIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWE 89
Query: 145 EDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSE 204
+D DG+ LAN IN LP+ I+VF ILP+++ FD RREC R+Y YLLPA+IIGI+S S
Sbjct: 90 KDPDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSS 149
Query: 205 DEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK---KHHARKSPGNGIMSNKTGXXXXX 261
E++ H+ EFN++L FEG HPFHNYT R+KYRK H R + +
Sbjct: 150 GEVEEHLIEFNNILKCFEGNHPFHNYTARAKYRKVLAGAHRRAKETSTTAHSIPSEMVAD 209
Query: 262 XXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADR 321
D+D+ + D N S + ++ARWL+EP++ DR
Sbjct: 210 KSTSGDGTTSDIDEEYLNSPSILDSSAPEDNCNMDNP-ELPESHVQIQARWLHEPNDNDR 268
Query: 322 LNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDIL 381
L+ SHFR I CSC +L+ G +VE+ I G SFMLHQIRKMVGTAVAVKR L+P+DI+
Sbjct: 269 LSASHFRDILTCSCRELRSSSGVQFVELTICGASFMLHQIRKMVGTAVAVKRGLLPKDII 328
Query: 382 SLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTS 441
LSL KF+RIVLP+AP EVLILR N+F R+ G +RP + S+ ESE I V EFY +
Sbjct: 329 ELSLAKFSRIVLPIAPSEVLILRDNSFCTRNKHGSIVRPGIQSINESEEIKKGVMEFYKA 388
Query: 442 VMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
++PEL+KFLD+S PW EWVE LD ++S D +LDEVR A+R WK+++ R K A
Sbjct: 389 ALVPELAKFLDASLPPWQEWVENLDHFTSIPDPQLDEVRTAYRAWKDDYDRVKMA 443
>M8C578_AEGTA (tr|M8C578) Putative tRNA pseudouridine synthase OS=Aegilops
tauschii GN=F775_04013 PE=4 SV=1
Length = 429
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 275/413 (66%), Gaps = 5/413 (1%)
Query: 87 TIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKED 146
IE LE+AI+KAGGI +SN+G L KV W RSSRTDKGVHSLATMIS KMEIP+ AW++D
Sbjct: 11 AIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKD 70
Query: 147 RDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDE 206
DG+ LAN IN LP+ I+VF ILP+++ FD RREC R+Y YLLPA+IIGI+S S E
Sbjct: 71 PDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGE 130
Query: 207 IDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK---KHHARKSPGNGIMSNKTGXXXXXXX 263
++ H+ EFN++L FEG HPFHNYT R+KYRK H R + +
Sbjct: 131 VEEHLIEFNNILKGFEGNHPFHNYTARAKYRKVLAGAHRRAKETSTTAHSIPFEMVADQS 190
Query: 264 XXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLN 323
D+D+ + D N S + ++ARWL+EP++ DRL+
Sbjct: 191 TSGDGTTSDIDEEYLNSPSILDSSAPEDNCKMDNP-ELPESRVQIQARWLHEPNDNDRLS 249
Query: 324 VSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSL 383
SHFR I CSCG+L+ G +VE+ I G SFMLHQIRKMVGTAVAVKR L+P+DI+ L
Sbjct: 250 ASHFRDILTCSCGELRSSSGVQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIQL 309
Query: 384 SLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVM 443
SL KF+R+VLP+AP EVLILR N+F R+ G +RP + S+ ESE I V EFY + +
Sbjct: 310 SLAKFSRVVLPIAPSEVLILRDNSFCTRNKQGSIVRPGIQSINESEEIKKGVMEFYKAAL 369
Query: 444 LPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENF-RAKSA 495
+PEL+KFLD+S PW EWVE LD ++S D +LDEVR A+R WK+++ R K A
Sbjct: 370 VPELAKFLDASLPPWQEWVENLDHFTSIPDPQLDEVRTAYRAWKDDYDRVKMA 422
>B9RVG5_RICCO (tr|B9RVG5) tRNA pseudouridine synthase OS=Ricinus communis
GN=RCOM_1135680 PE=3 SV=1
Length = 377
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 226/327 (69%), Gaps = 15/327 (4%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KWEPF KK VV+RVGYVGTDYRGLQ Q DEH LSTIE ELE AI+KAGGI DSN+G+L K
Sbjct: 47 KWEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLHK 106
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLATMIS KMEIPE+AWKED +G+ LA +N YLP+ IR+F ILPS
Sbjct: 107 IAWARSSRTDKGVHSLATMISMKMEIPENAWKEDPNGIALAECVNYYLPDNIRIFSILPS 166
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
+K FDPRRECNLRKYSYLLPA+IIGI+ HF+ EID HIS+FN +L+AFEGEHPFHNYT+
Sbjct: 167 QKSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAFEGEHPFHNYTI 226
Query: 233 RSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXX 292
RSKYRK++ + G + K +D+ + +D
Sbjct: 227 RSKYRKQY---PTAITGRVP-KRARSSSERSTSESEKSDGEEDYEIDEINIEDHNGSIQS 282
Query: 293 XXXXNDFSHQNSSLV---------VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLG 343
FS+Q V + ARWLYEPDE DR+ SHFRKI +CSCGKL+ G
Sbjct: 283 SSKFR-FSNQQKGGVLEQQQYNAGILARWLYEPDETDRIGASHFRKIFRCSCGKLETSKG 341
Query: 344 KDYVEIKIWGDSFMLHQ-IRKMVGTAV 369
D+VEI IWG+SFMLHQ + MV A+
Sbjct: 342 FDFVEISIWGESFMLHQPLLVMVQVAI 368
>B4FF04_MAIZE (tr|B4FF04) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 369
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/374 (49%), Positives = 245/374 (65%), Gaps = 16/374 (4%)
Query: 131 MISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYL 190
MIS KMEIP+ AW++D DG+ LA+ IN LP+ +RVF ILP+++ FD RREC R+Y YL
Sbjct: 1 MISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDVRRECLYREYFYL 60
Query: 191 LPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK----KHHARKSP 246
LPA+IIGI+ +S +E+ H+SEFN +L FEG HPFHNYT R+KYRK +H K
Sbjct: 61 LPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTARAKYRKVLAGRHRRAKGA 120
Query: 247 GNGI--MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTL--GDKDQXXXXXXXXXXNDFSHQ 302
+ + MS+ TG D D +S+ G + D
Sbjct: 121 SSALKSMSSDTGMAESSSEESTSPDH-DEDLNISSIFDSGIPEDTRVNGILKLSED---- 175
Query: 303 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 362
L ++ARWL+EPDE+DRLN SHFR I CSCG LQ G +VE+ I G SFMLHQIR
Sbjct: 176 --RLQIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSSGIQFVELTICGVSFMLHQIR 233
Query: 363 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 422
KMVGTAV VKR L+PRDI+ LSL KF+RIVLP+AP EVL+L+ N+F +S G+ +RP +
Sbjct: 234 KMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLVLKDNSFCTKSKGGRIVRPGI 293
Query: 423 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 482
S+ +SE VEEFY + +LPE++KFLD S PW EW+E LD++S ++LDEVR A
Sbjct: 294 QSMNKSEATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWLENLDRFSGIPGSQLDEVREA 353
Query: 483 WRTWKENF-RAKSA 495
+R W++++ RAK A
Sbjct: 354 YRAWRDDYDRAKMA 367
>Q10LQ9_ORYSJ (tr|Q10LQ9) tRNA pseudouridine synthase family protein, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os03g21980 PE=2
SV=1
Length = 374
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 182/376 (48%), Positives = 246/376 (65%), Gaps = 20/376 (5%)
Query: 131 MISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYL 190
MIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF +LP+++ FD RREC R+Y YL
Sbjct: 1 MISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPAQRSFDVRRECLYREYLYL 60
Query: 191 LPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK----KHHARKSP 246
LPA+IIGI+ S +E+ H+SEFNS+L FEG HPFHNYT R+KYRK +H K
Sbjct: 61 LPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTARAKYRKVLAGRHRKVKGA 120
Query: 247 GNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNS-- 304
+ + S T DD ++ ++D + S++++
Sbjct: 121 SSAVNSMPTEMSLDQSSS---------DDGTTSDHDEEDLNSSSIIGSSVPEDSYKDNPE 171
Query: 305 ----SLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ 360
+ +RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQ
Sbjct: 172 FSEKQVQIRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQ 231
Query: 361 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRP 420
IRKMVGT+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP
Sbjct: 232 IRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRP 291
Query: 421 EMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVR 480
+ S+ ESE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR
Sbjct: 292 GIQSMNESEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVR 351
Query: 481 MAWRTWKENF-RAKSA 495
A+R WK ++ R K A
Sbjct: 352 SAYRVWKADYDRVKMA 367
>A9T4Z2_PHYPA (tr|A9T4Z2) tRNA pseudouridine synthase (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140242 PE=3 SV=1
Length = 445
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 246/433 (56%), Gaps = 17/433 (3%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V M +GYVGT Y+GLQIQR TIE+ELE AI+KAGG+ +SNFG+L K+ W RS
Sbjct: 1 KKKVAMWLGYVGTRYKGLQIQRGPGSAQTIEEELELAIFKAGGMIESNFGNLSKISWTRS 60
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
SRTDKGVHSL T+IS KME+PE AW D DG LA+ IN +L IRVFGI P + F
Sbjct: 61 SRTDKGVHSLCTVISMKMEVPEAAWVNDMDGFALADNINFHLSPFIRVFGITPVTRSFRA 120
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK 238
R +C R Y YLLPA I+GI +++ +++F SLL FEG+H +HNYT+R YR
Sbjct: 121 RHDCCTRTYDYLLPAAILGIHPDTVPSQVEQRVTKFRSLLHLFEGKHAYHNYTIRRLYRP 180
Query: 239 -KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXN 297
KS N N T S L D+ +
Sbjct: 181 FPEKPYKSRLNDRNDNDTSNERTDKPSTTTS---------SIELDFLDEEDIMEELPDRS 231
Query: 298 DFSHQNSSLV-VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSF 356
F+ ++ ++A WL P+E+D++ SHFRK+ +CG + ++ I I G SF
Sbjct: 232 TFTLPGGNVTDLKAWWLPTPNESDKVWSSHFRKVISFNCGMPETFGEAQFIRISITGSSF 291
Query: 357 MLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGK 416
M+HQIRKM+GTA+AV L+P D++ +SL + +RIVLPLAPP+ LIL N F
Sbjct: 292 MVHQIRKMIGTAIAVFHGLLPGDVIPISLARHSRIVLPLAPPDGLILVSNDFM------P 345
Query: 417 FIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAEL 476
F P L S + V+EF +V++P++S + + S W W+ L++ ++E+
Sbjct: 346 FRLPSHPKLEMSSAVRERVDEFCANVLMPDISPLISAKSSNWSIWIMNLERNVKIPESEI 405
Query: 477 DEVRMAWRTWKEN 489
EVR AW W+E
Sbjct: 406 AEVRAAWTEWREQ 418
>D8RMK1_SELML (tr|D8RMK1) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_97541 PE=3 SV=1
Length = 428
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 249/450 (55%), Gaps = 35/450 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + VGYVGTDY+GLQIQR + ++E ELE AIYKAGGI + N+ LDKV+W RS
Sbjct: 1 KKNVAIWVGYVGTDYKGLQIQRGVAGIHSVENELEEAIYKAGGISEENYRHLDKVRWKRS 60
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
SRTDKGVHSL T+++ K+E+ ++W D DG+ +A+ N YLP I +FG++P K FD
Sbjct: 61 SRTDKGVHSLCTVVTMKLEVAVNSWLNDVDGIKIADAFNAYLPANISIFGVVPVTKSFDA 120
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK 238
RR C R Y Y PA IGI + S +++D I +F L + EG H FHNYTVR YRK
Sbjct: 121 RRSCYSRTYDYYFPAACIGINNESSSEDVDQRIQDFRRTLKSLEGRHAFHNYTVRRLYRK 180
Query: 239 -KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXN 297
+ SP +++++ D D + +G++
Sbjct: 181 SQRRGTYSPSRNLIADEE---SSEDEEPSFKDTHDEQDNPAADIGEERGAGR-------- 229
Query: 298 DFSHQNSSLVVRARWLYEPDEA-DRLNVSHFRKISQCSCGKLQRL-LGKDYVEIKIWGDS 355
RA WL E +E D + SHFR +++C+C ++L V I++ G+S
Sbjct: 230 -----------RAYWLDESEEGKDPVKASHFRNVAKCTCEGPEKLNCPSSVVRIRVTGES 278
Query: 356 FMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF------- 408
FM+HQIRKMVGTA+AV R+++P D + +S + R+VLPLAPP L+L GN+F
Sbjct: 279 FMVHQIRKMVGTAIAVFRHVLPEDAIPVSTCRHARVVLPLAPPHGLVLSGNSFFPFRGGY 338
Query: 409 -SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDK 467
+ G + ++ V S+ I + F+ + P +S ++ ++PW +W+E L+
Sbjct: 339 TRAKGGTGGYFFSKLGIQVSSQ-IAERMNSFWLEKLAPVISSSMNEEEAPWSQWLESLE- 396
Query: 468 YSSFADAELDEVRMAWRTWKENFRAKSASD 497
+ D E +R AW+ W+ + SD
Sbjct: 397 LNRIDDLEFANLRDAWKQWQNMATMRRYSD 426
>B8AP18_ORYSI (tr|B8AP18) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_11484 PE=4 SV=1
Length = 722
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 174/278 (62%), Gaps = 19/278 (6%)
Query: 223 GEHPFHNYTVRSKYRK----KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVS 278
G HPFHNYT R+KYRK +H K + + S T DD +
Sbjct: 441 GNHPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPT---------EMSLDQSSSDDGTT 491
Query: 279 TTLGDKDQXXXXXXXXXXNDFSHQNS------SLVVRARWLYEPDEADRLNVSHFRKISQ 332
+ ++D + S++++ + +RARWL+EPDE DRLN SHFR I
Sbjct: 492 SDHDEEDLNSSSIIGSSVPEDSYKDNPEFSEKQVQIRARWLHEPDENDRLNASHFRDILT 551
Query: 333 CSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIV 392
SCG+LQ G +VE+ I G SFMLHQIRKMVGT+VAVKR L+P+DI++LSL KF+RIV
Sbjct: 552 FSCGELQISSGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIV 611
Query: 393 LPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLD 452
LP+AP EVL+LR N+F +R+ G +RP + S+ ESE + V EFY + ++PEL+ FLD
Sbjct: 612 LPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNESEEVKKGVMEFYRAALVPELANFLD 671
Query: 453 SSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENF 490
+S PW EWVE LD+++S D +L+EVR A+R WK ++
Sbjct: 672 ASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWKADY 709
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 131/171 (76%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+WE KK VV+RVGYVGT+YRGLQ QR+ STIE LETAI+KAGGI +SN+G L K
Sbjct: 65 RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLATMIS KMEIP+ AW+ D DG+ L+N IN LP+ +RVF +LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEG 223
++ FD RREC R+Y YLLPA+IIGI+ S +E+ H+SEFNS+L FE
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEA 235
>M0VAM5_HORVD (tr|M0VAM5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 239
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 303 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 362
S + ++ARWL+EP++ DRL+ SHFR I CSCG+LQ G +VE+ I G SFMLHQIR
Sbjct: 39 QSRVQIQARWLHEPNDNDRLSASHFRDILTCSCGELQSSSGVQFVELTICGVSFMLHQIR 98
Query: 363 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 422
KMVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLILR N+F R+ G +RP M
Sbjct: 99 KMVGTAVAVKRGLLPKDIIKLSLAKFSRIVLPIAPSEVLILRDNSFCTRNKQGSIVRPGM 158
Query: 423 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 482
S+ ESE I V EFY ++PEL+KFLD S PW EWVE LD ++S D++LDEVR A
Sbjct: 159 QSINESEEIKKGVMEFYKVALVPELAKFLDESLPPWQEWVENLDHFTSIPDSQLDEVRTA 218
Query: 483 WRTWKENF-RAKSA 495
+R WK+++ R K A
Sbjct: 219 YRAWKDDYDRVKMA 232
>D8SIT9_SELML (tr|D8SIT9) tRNA pseudouridine synthase OS=Selaginella
moellendorffii GN=SELMODRAFT_117791 PE=3 SV=1
Length = 437
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 123/186 (66%), Gaps = 6/186 (3%)
Query: 59 KKTVVMRVGYVGTDYRG------LQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KK V M +GYVGT Y+G L++ L+ IE +L+ AIYKAGGI DSN+G K
Sbjct: 29 KKKVAMWIGYVGTGYKGNHCSLFLELSALNSSLTAIEADLDKAIYKAGGILDSNYGHHMK 88
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLAT+IS KME+P DAW++D G+ +A+RIN +LP IRVFG++P
Sbjct: 89 VGWARSSRTDKGVHSLATVISLKMELPIDAWRDDPGGIEIADRINRHLPQCIRVFGVVPV 148
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
K F PR C+ R Y Y LPA +GI S EI + +F L FEGEHPFHNYT+
Sbjct: 149 SKTFRPRMACSERSYDYFLPALCVGINQRVSTCEIKQLLEQFRLQLKLFEGEHPFHNYTI 208
Query: 233 RSKYRK 238
R Y K
Sbjct: 209 RRNYGK 214
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 310 ARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAV 369
A WL E D DR+ H+RKI +CSCG +++ + + + G SFM+HQIRKM+GTAV
Sbjct: 259 AYWLQELDPTDRITSQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAV 318
Query: 370 AVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESE 429
AV R L+P DI+ +SL + +RIVLP+AP E L L + F + S I +
Sbjct: 319 AVTRKLLPPDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLG----- 373
Query: 430 PILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKEN 489
E F+ + E+ K + S + PW +W E +D Y + ++ +R AW WK+
Sbjct: 374 --CQRREAFWKDHVFLEIVKAMKSERDPWNKWCEAMDSYCYLPEPDVSSLRDAWLDWKKQ 431
Query: 490 FRA 492
A
Sbjct: 432 RNA 434
>D8QP88_SELML (tr|D8QP88) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_63437 PE=3 SV=1
Length = 403
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 122/186 (65%), Gaps = 6/186 (3%)
Query: 59 KKTVVMRVGYVGTDYRG------LQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
KK V M +GYVGT Y+G L++ L+ IE +L+ AIYKAGGI DSN+G K
Sbjct: 2 KKKVAMWIGYVGTGYKGNHCSLFLELSALNSSLTAIEADLDKAIYKAGGILDSNYGHHMK 61
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
V W RSSRTDKGVHSLAT+IS KME+P DAW++D G+ +A+ IN +LP IRVFG++P
Sbjct: 62 VGWARSSRTDKGVHSLATVISLKMELPIDAWRDDPGGIEIADMINRHLPQCIRVFGVVPV 121
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
K F PR C+ R Y Y LPA +GI S EI + +F L FEGEHPFHNYT+
Sbjct: 122 SKTFRPRMACSERSYDYFLPALCVGINQRVSTCEIKQLLEQFRLQLKLFEGEHPFHNYTI 181
Query: 233 RSKYRK 238
R Y K
Sbjct: 182 RRNYGK 187
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Query: 310 ARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAV 369
A WL E D DR+ H+RKI +CSCG +++ + + + G SFM+HQIRKM+GTAV
Sbjct: 233 AYWLQELDPTDRITAQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAV 292
Query: 370 AVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESE 429
AV R L+P DI+ +SL + +RIVLP+AP E L L + F + S I +
Sbjct: 293 AVTRKLLPPDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLG----- 347
Query: 430 PILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 487
E F+ + E+ K + S + PW +W E +D Y + + +R AW WK
Sbjct: 348 --CQRREAFWKDHVFLEIVKAMRSERDPWNKWCEAMDSYCYLPEPNVSSLRDAWLDWK 403
>Q00TY6_OSTTA (tr|Q00TY6) PUSH_ARATH Putative tRNA pseudouridine synthase (ISS)
OS=Ostreococcus tauri GN=Ot16g02650 PE=4 SV=1
Length = 543
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 193/419 (46%), Gaps = 31/419 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNF--GDLDKVKWG 116
KK V + + YVG Y+G R +T++ +E A+++ GGI N+ L ++KW
Sbjct: 87 KKPVALLLAYVGAGYKGNTHNAQAVRGTTVDDVVEDALFRWGGILLPNYRSKGLQRLKWS 146
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RSSRTDKGV SL T++S + EI + W D + A I +LP+ + F + + K F
Sbjct: 147 RSSRTDKGVSSLCTVVSLRAEIDPEVWTTDVEARATARDITKHLPDDVECFAVYNTPKSF 206
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKY 236
RREC +R Y YLLPA ++G+ ++ ++ FN LS F G HPFHNYT RS+Y
Sbjct: 207 QARRECVMRTYEYLLPARVLGLDGDAMDESGRRRLALFNEALSCFIGSHPFHNYTKRSQY 266
Query: 237 RKKHHA------RKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXX 290
K R S GN + G D + T D
Sbjct: 267 TAKARKDFRPRLRDSRGNAAWRGQDGAVMDDGSEDASEEADDESEEARPTTTATDD---- 322
Query: 291 XXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCG-KLQRLL------- 342
F WL E D D++ SHFR+I S G +++R+
Sbjct: 323 -----GRPFPEHVGDREKHTYWLLESDWTDKITQSHFRRIHNFSAGSEVERMTITNEDGS 377
Query: 343 ---GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPE 399
+ +V + + G+SFML+QIRKM+ +AVAV P + L SL + R +PLAP
Sbjct: 378 TTQSEPFVRVSVRGESFMLYQIRKMIASAVAVSLGHCPLEFLPASLARPCRAAMPLAPAS 437
Query: 400 VLILRGNTF-SMRSSAGKFIRP--EMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSK 455
L L F + R + + P + L SE + ++ F + P L+ L S +
Sbjct: 438 TLYLYDVEFMNFRVNTESSVEPPNRLTKLEPSEAVREDLARFRRDKLEPALAPALASDE 496
>A4S8M4_OSTLU (tr|A4S8M4) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_27900 PE=4 SV=1
Length = 556
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 205/445 (46%), Gaps = 17/445 (3%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGD--LDKVKWG 116
KK V + + YVG Y+G R +T++ +E A++ GGI N+ L ++KW
Sbjct: 88 KKPVAIVLAYVGQGYKGNTHNAQAPRGTTVDDVVEDALFAWGGILMPNYRSRGLQRLKWS 147
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RSSRTDKGV SL T++S + EI + W +D + A I +LP + F + + K F
Sbjct: 148 RSSRTDKGVSSLCTVVSLRAEIDPEVWTKDVEARETAREITKHLPEDVECFAVYNTPKSF 207
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKY 236
RREC +R Y YLLPA ++ ++ + + F+ L+AF G HPFHNYT R +Y
Sbjct: 208 QARRECIMRTYEYLLPARVLDLERGVLDASDAERLELFSKALAAFVGAHPFHNYTKRKQY 267
Query: 237 RKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXX 296
++ + S K DV+ +++
Sbjct: 268 TREAIGKYSAKRRDARGKLAWKGQEGAVMDDGSDEDVEGEHGEEDEEENVVASTSAAEHD 327
Query: 297 NDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGK-LQRL----------LGKD 345
+ F WLYE D D++ SHFR+I + G ++R+ +
Sbjct: 328 DGFPKHVGERRRGTYWLYESDPNDKIGPSHFRRIHNFTAGADVERMEITNDDGSKTTSEP 387
Query: 346 YVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRG 405
++ + + G+SFML+QIRKM+ +AVAV P + L SL + R +PLAP L L
Sbjct: 388 FIRVSVRGESFMLYQIRKMIASAVAVSLGHCPLEFLPASLSRPCRAAMPLAPASTLYLYD 447
Query: 406 NTFSMRSSAGKFIRPEMVSLVE-SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVER 464
F +P + +E SE + ++ F + P L+ L + + W ++ E
Sbjct: 448 VEFMKFRVNHDPSQPNRLERLEPSESVRADLARFQREKLEPALAPALLNDE--WDDFKEN 505
Query: 465 LDKYSSFADAELDEVRMAWRTWKEN 489
L + + + D + A+ T+K N
Sbjct: 506 LKQGNVTPELSRD-ILAAYETYKAN 529
>A8J7Q4_CHLRE (tr|A8J7Q4) tRNA pseudouridine synthase (Fragment) OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_175853 PE=3 SV=1
Length = 446
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 197/436 (45%), Gaps = 69/436 (15%)
Query: 75 GLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSLATMISF 134
G I R TIE+ LE A++ AG I ++NFG K++W R+SRTDKGVHSL T++
Sbjct: 51 GSSINRTLGENVTIEQVLEKALFAAGCISEANFGSFSKIRWSRASRTDKGVHSLGTVMGL 110
Query: 135 KMEIPEDAW----KEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYL 190
+M + + + D +G+ LA +N +LP IRVF + K+F R C R Y Y
Sbjct: 111 RMLVDDAKYVAGPDGDCEGLALAEAVNTHLPPQIRVF---TTNKKFSARHMCEGRVYQYY 167
Query: 191 LPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK-KHHARKSPGNG 249
LP +I ++ SE++ +++F L +EG HPFHN+T R Y+ + + PG+G
Sbjct: 168 LPVSMIDLKCDGSEEDAQ-RLAKFRDALKCYEGSHPFHNFTKRVTYQPGGSNVQFRPGDG 226
Query: 250 IMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVR 309
++ + V+
Sbjct: 227 VVGR-----------------------------------------------YGPYGRVLL 239
Query: 310 ARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIRKMVGT 367
RW E D DR+ + +R+I + + ++ G+ + +++ G SFMLH IR M+G
Sbjct: 240 LRWQTEVDPRDRITQTFYRRIYSFTAADPKPMVEGGEPCLLLEVSGQSFMLHHIRHMIGA 299
Query: 368 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS---MRSSAG----KFIRP 420
AVAV LI +++L SL R+ LP APP L+L +F + G + I
Sbjct: 300 AVAVTLGLISKEVLLGSLTPPARVTLPRAPPHTLLLSDCSFGRFPAQQGPGDNDLRNITG 359
Query: 421 EMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVR 480
E +SL E E F V+LP L + + + W +W + + F + V
Sbjct: 360 ERLSLREGG--QQRKEAFRNEVLLPALQQLVALPE--WQQWKASMYQVFPFPEVARSRVA 415
Query: 481 MAWRTWKENFRAKSAS 496
R FRAK +
Sbjct: 416 AGARCAVTWFRAKRGA 431
>M1BMH1_SOLTU (tr|M1BMH1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400018825 PE=4 SV=1
Length = 131
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 106/131 (80%)
Query: 364 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 423
MVGTAVA+KRNL+P DIL +SL KF+RIVLPLAP EVL+L+GN F++R+ G IRPEM+
Sbjct: 1 MVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEML 60
Query: 424 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 483
+L+ES+ IL V++FY S MLP+LS+FLD SKSPW EWVE LD +S D++L+EVR+AW
Sbjct: 61 TLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAW 120
Query: 484 RTWKENFRAKS 494
+ WK + +++
Sbjct: 121 KLWKAQYDSRT 131
>F0WUQ6_9STRA (tr|F0WUQ6) Ubiquitin fusion degradation protein putative OS=Albugo
laibachii Nc14 GN=AlNc14C277G10063 PE=4 SV=1
Length = 585
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 191/434 (44%), Gaps = 68/434 (15%)
Query: 55 EPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVK 114
E F+K+ V + GY G+DY G+Q+ + + TIE E+ A+Y G +R SNF DL+K+
Sbjct: 73 ESFVKRRVAIVAGYNGSDYHGVQLNPN---VPTIEDEIRKAMYHIGALRASNFQDLNKID 129
Query: 115 WGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGV-VLANRINIYLPNTIRVFGILPSK 173
W RSSRTDKGVH+ + + K+ + ED V L +N LP IR+F +
Sbjct: 130 WSRSSRTDKGVHASTIVFAGKLLLNEDVIDPVTGRVRGLTRALNENLPPNIRIFSVTRVC 189
Query: 174 KRFDPRRECNLRKYSYLLP-----ADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFH 228
F+ R EC LR+Y Y LP A I +++ + F S L +EG H FH
Sbjct: 190 NSFNARTECALREYEYFLPLAFLSASCITENRQKMRGQMNVMVQGFLSALEQYEGIHDFH 249
Query: 229 NYTVRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXX 288
NYT + K H +K+ + K+ D +S +LG
Sbjct: 250 NYTRSRSHFYKLHEKKN--QKFLERKSAAAH--------------GDTLSDSLGG----- 288
Query: 289 XXXXXXXXNDFSHQNSSLVVRARWLYEP-DEADRLN---VSHFRKISQCSCGKLQRLLGK 344
NS L P D A + H R + QC ++ G+
Sbjct: 289 --------------NSDLT-------SPFDTASKFRPRLPRHRRAVYQCRGSLIEDFYGE 327
Query: 345 DYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILR 404
YV++ I G +F+LHQIR M+G A++ + I + SL + +P+AP E L+LR
Sbjct: 328 PYVKVHITGQAFLLHQIRCMIGGAISFATDAISSTVFEASLYTDQIVRIPIAPAEGLLLR 387
Query: 405 GNTFSMRSSAGKFIRPEMVSLVESEPILNEV----------EEFYTSVMLPELS---KFL 451
N+F + +R P ++ V E F V+ E++ K L
Sbjct: 388 SNSFGGKRHRVSLVRDWNTDFSTDSPSVHRVLLSDREAALAETFRHEVIYREIAAAWKNL 447
Query: 452 DSSKSPWVEWVERL 465
S +PW W E L
Sbjct: 448 KGSAAPWEAWSEYL 461
>C1EHS5_MICSR (tr|C1EHS5) Predicted protein OS=Micromonas sp. (strain RCC299 /
NOUM17) GN=MICPUN_104259 PE=4 SV=1
Length = 601
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 172/373 (46%), Gaps = 39/373 (10%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGD-- 109
D E + KK V + +GYVG Y G R ST++ LE A++ AG I SN+
Sbjct: 103 DVPETYKKKPVALLMGYVGAGYSGNTTNASLPRGSTVDDVLEDALFDAGCILLSNYRSRS 162
Query: 110 LDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGI 169
L ++KW RSSRTDKGV SLAT++S ++E+ W+ D +G +A IN +LPN +RVFG
Sbjct: 163 LSRLKWSRSSRTDKGVSSLATVVSARLEVDVGVWENDPEGTRIAADINRHLPNHVRVFGA 222
Query: 170 LPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEI--------------DFHISEFN 215
+ K F RR C R Y YLLPA +G+ + D + ++ F
Sbjct: 223 YSTPKSFQARRACVRRTYDYLLPATCLGLNVNGERDAALAWPGAPELADATGEEVMARFR 282
Query: 216 SLLSAFEGEHPFHNYTVRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDD 275
L FEG H FHN Y ++ +P G + D +D
Sbjct: 283 RALRMFEGSHYFHN------YTRRSAYAPAPDGGRRRARA------------RGAGDDED 324
Query: 276 FVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRA-RWLYEPDEADRLNVSHFRKISQCS 334
+ D+ D ++ R WL D+AD + V H RK++
Sbjct: 325 DETEGSEPMDEAEDGEAEDGAGDSPPEHVGCRRRGCYWLKARDDADLVGVKHARKVNSFI 384
Query: 335 CGKLQRLLG-KD---YVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTR 390
G KD +V + + GDSFML+QIRKM+ TAVA P +++ SL + R
Sbjct: 385 AADPAVAAGHKDAPPFVRVTVNGDSFMLYQIRKMIATAVAAAIGHFPLELIPASLTRPAR 444
Query: 391 IVLPLAPPEVLIL 403
I P+AP L L
Sbjct: 445 IATPIAPASTLYL 457
>B9RVG6_RICCO (tr|B9RVG6) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1135690 PE=4 SV=1
Length = 139
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 103/132 (78%)
Query: 364 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 423
MVGTAVAVKR L+PRDIL LSL KF+RIVLPLAP EVL+LRGN FS+R R EM+
Sbjct: 1 MVGTAVAVKRKLLPRDILPLSLAKFSRIVLPLAPSEVLVLRGNNFSLRKRPDIGARLEML 60
Query: 424 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 483
++VESE ILN V +FY+++MLP++SK LD SPW W+E+LD+Y+S DA+L+EVR AW
Sbjct: 61 TMVESEEILNAVNKFYSNIMLPQVSKLLDPCGSPWKIWIEKLDEYTSIPDAQLEEVRSAW 120
Query: 484 RTWKENFRAKSA 495
WKE F+ +++
Sbjct: 121 HLWKEKFQTRNS 132
>A9P2G1_PICSI (tr|A9P2G1) tRNA pseudouridine synthase OS=Picea sitchensis PE=2
SV=1
Length = 212
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 95/122 (77%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
+W+P K+ V MR+GYVGT+YRGLQIQRD TIE ELE AI KAGG+ +SN+G+L K
Sbjct: 76 RWKPITKRKVAMRIGYVGTNYRGLQIQRDSASTITIEDELEKAILKAGGMLESNYGNLHK 135
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ W RSSRTDKGVHSLAT+I+ KMEIP+ AW+ED DG+ LA+ IN +LP IR+F ILP
Sbjct: 136 LGWRRSSRTDKGVHSLATVIAMKMEIPDGAWEEDPDGIALADVINRHLPYNIRIFSILPV 195
Query: 173 KK 174
K
Sbjct: 196 NK 197
>M4C131_HYAAE (tr|M4C131) Uncharacterized protein OS=Hyaloperonospora
arabidopsidis (strain Emoy2) PE=4 SV=1
Length = 574
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 206/446 (46%), Gaps = 56/446 (12%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+K+ V + GY GT Y GLQ+ D + TIE E+ AI+KAG +R+SNF DL K+ W
Sbjct: 51 LVKRKVAIVGGYNGTGYHGLQLNND---VQTIEDEIRRAIFKAGAMRESNFEDLGKIDWT 107
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVV--LANRINIYLPNTIRVFGILPSKK 174
RSSRTDKGVH+ + S K+ I E+ + G V L +N LP IRVF K
Sbjct: 108 RSSRTDKGVHAGCIVFSGKLLIDEENKVDQASGRVKDLTEALNASLPENIRVFSCTRVNK 167
Query: 175 RFDPRRECNLRKYSYLLPADII---GIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
RF R+ C LR+Y Y +P + ++SH +E + D ++EF L +EG + FHN+T
Sbjct: 168 RFSARKNCVLREYEYFMPLSFLRDSTLESHGAEFDQDEAVAEFCRALRRYEGVNDFHNFT 227
Query: 232 -VRSKYRKKHHAR---KSPGNGIMSN-KTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQ 286
RS++ K R K+ G ++ +TG DV ++ +T+ +++
Sbjct: 228 RSRSQFYKLQAKRDRWKAQSRGDTADTETG---DDENNAYGDDATDVCGYMDSTVEEEEN 284
Query: 287 XXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDY 346
+ H N L +L + H R + CS +Q G+ Y
Sbjct: 285 SAVDDCAGEVHQVEH-NEGLT------------RKLLLRHRRSVYSCSGSLVQDFCGEPY 331
Query: 347 VEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGN 406
+ I I G +F+L+QIR MVG A+AV + +R+ A E L+L +
Sbjct: 332 LRIHIVGQAFLLNQIRCMVGGALAV------------ATKGMSRVAFDAALSEGLVLLSS 379
Query: 407 TFSMR-SSAGKFIRPEMVSLVESEPILN----------EVEEFYTSVMLPELSK--FLDS 453
+F + + + P E + +++ E+ F V+ E+S +
Sbjct: 380 SFGGKLHTVSLHVDPNTALAKERKDLMHRILLNRQEDEEMTRFREEVIYKEVSSNWGTEV 439
Query: 454 SKSPWVEWVERLDKYSSFADAELDEV 479
W ++ER Y S D + DE+
Sbjct: 440 QSDRWRAYLERC--YESNKDLDEDEL 463
>M2Y4H5_GALSU (tr|M2Y4H5) tRNA pseudouridine synthase A OS=Galdieria sulphuraria
GN=Gasu_19830 PE=4 SV=1
Length = 641
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 219/482 (45%), Gaps = 66/482 (13%)
Query: 55 EPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVK 114
E +K+ + + +GYVGTDY GLQ+ R E + TIE+E+E A+Y G I + NF + K+
Sbjct: 104 EGRVKRMICLYIGYVGTDYYGLQVNRQEG-IKTIEEEIERALYSCGWIGEQNFRRVQKIS 162
Query: 115 WGRSSRTDKGVHSLATMISFKMEIPEDAW----------------KEDRDGVVLAN---- 154
W R+SRTDKGVH+ +I+ K + E W K + D + ++
Sbjct: 163 WSRASRTDKGVHACGNVIALKALLKEQ-WFELDSNFEKTKQNTRTKNNSDELAFSSLGSL 221
Query: 155 ------RINIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEID 208
++N LP++IR+ G+ P K FD R CN R Y YL+P + I S + I+
Sbjct: 222 KKDVLEQLNRNLPDSIRILGVQPVTKHFDARSRCNFRAYEYLMPLEAIPGAS----ENIE 277
Query: 209 FHISEFNSLLSAFEGEHPFHNYT--VRSKYRKKHHAR---KSPGNGIMSNKTGXXXXXXX 263
I +LS F+G H FHN++ +R+ + KK +AR PG + ++
Sbjct: 278 QAICRLEEILSLFKGTHRFHNFSSGLRAAH-KKANARLEGSDPGEEFTTVRS-------- 328
Query: 264 XXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSH----QNSSLVVRARWLYEPDEA 319
D+++ +K+Q D Q S + + + +
Sbjct: 329 EQVSSTEADIEERNIEDANNKEQSMKKYEENDEIDIEDNQEMQFSDYLCKVIRQWPEHSS 388
Query: 320 DRLNVSHF-RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPR 378
RL + R + + G++YV ++ G SF+LHQIRKM+G A++V +
Sbjct: 389 HRLKRQEYIRSVYIADIEGPLEIQGRNYVLLRFAGQSFILHQIRKMIGGALSVMYGRLSM 448
Query: 379 DILSLSLIKFTRIVLPLAPPEVLILRGNTF--SMRSSAGKFIRPEMVSLVESEPILNEVE 436
+ L ++L ++ + LAP E L+L F S R E L+ S P+ E
Sbjct: 449 EALKVALYGPFQVPISLAPSEPLMLVLCDFWNSKR---------ERYELIPS-PVTQEAM 498
Query: 437 EFYT-SVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENFRAKSA 495
+ Y ++LP +++ L+ + +VE L Y + L + + W E R +
Sbjct: 499 KHYKYKILLPRVAELLEQKRPFERFFVEGLYDYG--GNGNLQRLITKFHEWDEKRRQRKV 556
Query: 496 SD 497
+
Sbjct: 557 QN 558
>K8F680_9CHLO (tr|K8F680) Uncharacterized protein OS=Bathycoccus prasinos
GN=Bathy16g02100 PE=4 SV=1
Length = 593
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 178/402 (44%), Gaps = 70/402 (17%)
Query: 56 PFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNF--GDLDKV 113
P K + + + YVG ++G R ST++ +E AIYKAGGI SN+ L ++
Sbjct: 90 PRKKIPIALVLAYVGDTFKGNTQNVMLPRGSTVDDVIEDAIYKAGGILFSNYRSKGLSRL 149
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGV----------------------- 150
KW RSSRTDKGV SL T++ +ME P A+ ++ V
Sbjct: 150 KWSRSSRTDKGVSSLFTVVGLRMEAPVRAYGGGKEVVGEEETNDEEDERKSSSRNRSSKR 209
Query: 151 --------------VLANRINIYLP-NTIRVFGILPSKKRFDPRRECNLRKYSYLLPADI 195
++ +IN +LP +T++ F + K FD RR R Y YLLP
Sbjct: 210 SEEEEEEDDAEAKALIVEKINRHLPTDTVKAFACFKATKSFDARRAAISRTYEYLLPLKC 269
Query: 196 IGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHARKSPGNGIMSNKT 255
+ D+ + + F L FEG HPFHNYT R Y G G N+
Sbjct: 270 L-------RDDKNGELEMFREALKTFEGSHPFHNYTKRGLY--------GAGKGNDKNRK 314
Query: 256 GXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYE 315
G D S++ + + + S +++ WL E
Sbjct: 315 GGRGNRNKKNALTEDDDGLGETSSSEEQELEEEEEKELPKRIETSGKHTY------WLLE 368
Query: 316 PDEADRLNVSHFRKISQCSCGK----LQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAV 371
D D ++V H+R+I + +C K ++ +V +K++G+SFMLHQIRKM+ TAV V
Sbjct: 369 KDVDDLVHVMHYRRIHEFTCSKEPEIIEGFESYPFVRVKVYGESFMLHQIRKMIATAVLV 428
Query: 372 KRN-----LIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
+ +P + SL + R+V P+APP L L G F
Sbjct: 429 ALDSEETPTMPLSFIKASLCRPCRVVTPMAPPLTLFLTGAEF 470
>H3GMB8_PHYRM (tr|H3GMB8) Uncharacterized protein OS=Phytophthora ramorum PE=4
SV=1
Length = 581
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 174/366 (47%), Gaps = 40/366 (10%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+K+ V + GY+GT Y GLQ+ + ++TIE E+ AI+KAG +R+SNF DL K+ W
Sbjct: 47 LVKRKVAIVSGYMGTGYHGLQLNEN---VNTIEDEVRHAIFKAGAMRESNFADLGKIDWA 103
Query: 117 RSSRTDKGVHSLATMI--------SFKMEIPEDAWKEDRDGVV--LANRINIYLPNTIRV 166
RSSRTDKGVH+ ++ S K+ I E+ + G V L +N LP+ IRV
Sbjct: 104 RSSRTDKGVHAGCIVVRMEMGFVFSGKLLIDEEDKVDPVSGRVQGLTEALNESLPDNIRV 163
Query: 167 FGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEI---DFHISEFNSLLSAFEG 223
F KRF R+ C LR+Y Y +P + S+ E+ + ++EF L +EG
Sbjct: 164 FSCTRVNKRFSARKNCVLREYEYFMPLSFLKASMVGSDVEVLDTEEAVAEFCRALRRYEG 223
Query: 224 EHPFHNYTVRSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGD 283
H FHN+T Y K A++ ++T DVD+ GD
Sbjct: 224 VHDFHNFTRSRSYFYKVQAQRKQWK--TQSRTDVTDGEVVEADDNAEDDVDEAEGEEGGD 281
Query: 284 KDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLG 343
D++ +++ E + +L H R I CS + G
Sbjct: 282 --------------DYAT--------SQFHDEEELTRKLLPRHRRSIYSCSGSLIPDFCG 319
Query: 344 KDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 403
+ ++ + I G +F+L+QIR MVG A+AV + R +L + +P+AP E L+L
Sbjct: 320 EPHLRVHIVGQAFLLNQIRCMVGGALAVATKGMSRVAFDAALTTNRIVRVPIAPAEGLVL 379
Query: 404 RGNTFS 409
++F
Sbjct: 380 LSSSFG 385
>D0NH89_PHYIT (tr|D0NH89) Ubiquitin fusion degradation protein, putative
OS=Phytophthora infestans (strain T30-4) GN=PITG_10857
PE=4 SV=1
Length = 840
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 205/448 (45%), Gaps = 55/448 (12%)
Query: 69 VGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSL 128
+GT Y GLQ+ + + TIE ++ AI++AG +R+SNF DL K+ W RSSRTDKGVH+
Sbjct: 1 MGTGYHGLQLNDN---VKTIEDDIRNAIFQAGAMRESNFEDLGKIDWARSSRTDKGVHAG 57
Query: 129 ATMISFKMEIPEDAWKEDRDGVV--LANRINIYLPNTIRVFGILPSKKRFDPRRECNLRK 186
+ S K+ I E+ + G V L +N LP IRVF KRF R+ C LR+
Sbjct: 58 CIVFSGKLLIDEENKVDPISGRVHELKEALNASLPENIRVFSCTRVSKRFSARKNCVLRE 117
Query: 187 YSYLLPADIIG---IQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
Y Y +P + I S + + D ++EF L +EG H FHN+T Y K A+
Sbjct: 118 YEYFMPLSFLRGSLIGSDGEDFDTDEAVAEFCRALRRYEGVHDFHNFTRSRSYFYKVQAK 177
Query: 244 KSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQN 303
K + DD G +D +D+S ++
Sbjct: 178 KK---------------HYKAHYRRSVAESDD-----AGVEDNDEDAEEESGIDDYSEES 217
Query: 304 SSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRK 363
S ++ E + +L H R I CS + G+ ++ I I G +F+L+QIR
Sbjct: 218 S------QFEDEEELTRKLLPRHRRSIYSCSGSLVPDFCGEPHLRIHIVGQAFLLNQIRC 271
Query: 364 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRS-SAGKFIRPEM 422
MVG A+AV + R +L+ + +P+AP E L+L ++F +S + + P
Sbjct: 272 MVGGALAVATKGMSRVEFDAALLTNRIVRVPIAPAEGLVLLSSSFGGKSHTVSLYEDPNT 331
Query: 423 VSLVESEPILN----------EVEEFYTSVMLPELSKF--LDSSKSPWVEWVERLDKYSS 470
V E + +++ E+ +F V+ E++ +D W ++ER + +
Sbjct: 332 VLAKERKDVVHRVLLNRKEDEEMTKFRDEVIYKEIASSWDMDEKMDRWRAYLERCYESNG 391
Query: 471 FADA--------ELDEVRMAWRTWKENF 490
D ELD+ ++A + + F
Sbjct: 392 RLDEDELSAVLFELDQAKLATKNKNQAF 419
>G4YJ60_PHYSP (tr|G4YJ60) Putative uncharacterized protein OS=Phytophthora sojae
(strain P6497) GN=PHYSODRAFT_358674 PE=4 SV=1
Length = 935
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 168/349 (48%), Gaps = 34/349 (9%)
Query: 69 VGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSL 128
+GT Y GLQ+ + + TIE E+ AI++AG +R+SNF DL K+ W RSSRTDKGVH+
Sbjct: 1 MGTGYHGLQLNDN---VETIEDEIRRAIFEAGAMRESNFEDLGKIDWARSSRTDKGVHAG 57
Query: 129 ATMISFKMEIPEDAWKEDRDGVV--LANRINIYLPNTIRVFGILPSKKRFDPRRECNLRK 186
+ S K+ I E+ + G V L +N LP+ IRVF KRF R+ C LR+
Sbjct: 58 CIVFSGKLLIDEENKVDPVSGRVRGLTEALNASLPDNIRVFSCTRVNKRFSARKNCVLRE 117
Query: 187 YSYLLPADIIG---IQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT-VRSKYRKKHHA 242
Y Y +P + I S ++ + D I+EF L +EG H FHN+T RS + K
Sbjct: 118 YEYFMPLSFLKDSIIGSDAADFDTDEAIAEFCRALRRYEGVHDFHNFTRSRSYFYKMQAK 177
Query: 243 RKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQ 302
RK N D D ST + +D+S +
Sbjct: 178 RKQWKMEKQRNAAEAQASADDVVEAEDVDDDDAEDSTAV---------------DDYSEE 222
Query: 303 NSSLVVRARWLYEPDEA--DRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ 360
+S +E +E +L H R I CS + G+ ++ + I G +F+L+Q
Sbjct: 223 SSQ--------FEDEEGLTRKLLTRHRRSIYSCSGSLVPDFCGEPHLRVHIVGQAFLLNQ 274
Query: 361 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS 409
IR MVG A+AV + R +L+ + +P+AP E L+L ++F
Sbjct: 275 IRCMVGGALAVATKGMSRVAFDAALLTNRIVRVPIAPAEGLVLLSSSFG 323
>I0Z2B4_9CHLO (tr|I0Z2B4) tRNA pseudouridine synthase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_14273 PE=3 SV=1
Length = 391
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
Query: 75 GLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGVHSLATMISF 134
GLQ+QR ++T+E LE AI+KAGGI +SN G L K+ W RSSRTDKGVHS +T+I
Sbjct: 7 GLQLQRGVEDITTVEAALEEAIFKAGGILESNRGALHKIDWSRSSRTDKGVHSCSTVIGL 66
Query: 135 KMEIPEDAWKEDRDGVVLANRINIYLP-NTIRVFGILPSKKRFDPRRECNLRKYSYLLPA 193
KME ++++ D +G+ +A IN +LP +RV + + ++FD R+ C R YSY LP
Sbjct: 67 KMECVVESFESDPEGLGIAGEINKHLPGQQVRVLSVQRTTQKFDARQICEGRVYSYFLPT 126
Query: 194 DIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYR 237
IIG++ SE++ + + L+ +EG H FHN+T R YR
Sbjct: 127 SIIGLELDGSEEDRE-RLRLLRECLALYEGVHAFHNFTKRRLYR 169
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 307 VVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIRKM 364
V W E DEAD + SHFR I + L+ G +++ G SFMLHQIR M
Sbjct: 187 VTAGAWNEERDEADPITRSHFRHIFSATADDPTPLVPGGTPCIKVVFSGQSFMLHQIRHM 246
Query: 365 VGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 403
+G AVAV R IP D + L +R ++PLAPP VL+L
Sbjct: 247 IGAAVAVARGTIPLDYVEGCLRSPSRAIMPLAPPHVLVL 285
>D8LDS4_ECTSI (tr|D8LDS4) Pseudouridylate synthase, putative OS=Ectocarpus
siliculosus GN=Esi_0126_0007 PE=4 SV=1
Length = 743
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 10/198 (5%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGYVGT + G Q D + T+E ELETA++KAG I DSN+GDL+K+ WGR+
Sbjct: 28 KRKVAIVVGYVGTAFHGWQQSTDAQNVRTVEGELETALWKAGAIADSNYGDLNKIGWGRT 87
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
SRTDKGVH+ T+ + K+ +P++ + +++N LP+ IR F + K F
Sbjct: 88 SRTDKGVHASKTVAAAKLLLPQETFTATGMSQYGKDKLNEKLPDDIRCFSVSKVPKSFRG 147
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK 238
R EC LR+Y+Y LP +++ +DE + +F LL F G H FHNY +K R+
Sbjct: 148 REECTLREYTYYLPRELL------PDDEA---LGKFRELLKLFVGTHSFHNY-ASTKGRQ 197
Query: 239 KHHARKSPGNGIMSNKTG 256
RK I K+G
Sbjct: 198 LKEVRKRVKASIDLKKSG 215
>K3WTN5_PYTUL (tr|K3WTN5) Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G008315 PE=4 SV=1
Length = 599
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 8/193 (4%)
Query: 55 EPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVK 114
+ +K+ + + GY GT Y G+Q+ + + TIE EL AI+ AG +R+SNF DL K+
Sbjct: 69 DKLVKRKIAIVAGYSGTGYHGVQLNDN---VQTIEHELRQAIFNAGAMRESNFEDLGKID 125
Query: 115 WGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVV--LANRINIYLPNTIRVFGILPS 172
W RSSRTDKGVH+ + S K+ I E+ + G V LA +N LP TIR+F
Sbjct: 126 WSRSSRTDKGVHAGCIVFSGKLLIDEENQVDPATGRVKGLAEALNASLPPTIRIFSCTRV 185
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFH--ISEFNSLLSAFEGEHPFHNY 230
KRFD R+ C LR+Y Y +P + +S + D D + EF + +EG H FHN+
Sbjct: 186 NKRFDARKNCVLREYEYFMPLSFLQ-KSVLNADTTDLDEVVEEFCRAVKRYEGIHDFHNF 244
Query: 231 TVRSKYRKKHHAR 243
T Y K HA+
Sbjct: 245 TKARSYFYKEHAK 257
>D3BCX2_POLPA (tr|D3BCX2) Uncharacterized protein OS=Polysphondylium pallidum
GN=PPL_06350 PE=4 SV=1
Length = 624
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 10/202 (4%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D+ K + + YVGT Y GL+ Q + + +E LE A++KAG I SN GDLD
Sbjct: 176 DRMATLKKSPMALLFAYVGTGYHGLEYQISGY--NALENTLEQALFKAGLILPSNLGDLD 233
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
+++W RSSRTDKGVHSL+T+++ +EI + + VL +IN LP +R+ + P
Sbjct: 234 RIRWSRSSRTDKGVHSLSTLLAGCLEIEDGSGYYPEKVAVLIEKINRGLPPNLRILALAP 293
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
+ + FDPRR+C R Y Y+LP +G + + I+E S+L + G + +HN+T
Sbjct: 294 TSRSFDPRRQCTSRTYHYVLPKKYLGTKLTLEQ------INE--SILPLYIGSNSYHNFT 345
Query: 232 VRSKYRKKHHARKSPGNGIMSN 253
+ K + K G N
Sbjct: 346 SHRRTYKDLNEDKKKKRGAHRN 367
>I0Z8C0_9CHLO (tr|I0Z8C0) tRNA pseudouridine synthase (Fragment) OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_6187 PE=3 SV=1
Length = 314
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 95/189 (50%), Gaps = 30/189 (15%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + V +VG Y G+Q TIE EL +A+ KAG I D N GD KV+W R+
Sbjct: 2 KRKVAVFVAFVGAGYSGMQ---HNPGCKTIEGELGSAMNKAGAISDENAGDFSKVQWNRA 58
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S KM I E RIN +LP IRV G FD
Sbjct: 59 ARTDKGVSAAGNVVSLKMMIAFPDTVE---------RINSHLPEQIRVLGFTRVTNSFDA 109
Query: 179 RRECNLRKYSYLLPADII--------------GIQSHFSEDEIDFHISEFNSLLSAFEGE 224
R+ C+ R+Y Y+LPA I Q FS ++ + N +L AFEG
Sbjct: 110 RKHCDRRRYEYILPAFITIDGAAAAAAAEAAGSRQCRFSAEQ----QARLNEVLGAFEGT 165
Query: 225 HPFHNYTVR 233
H FHNYTVR
Sbjct: 166 HSFHNYTVR 174
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 328 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 387
R I C L G+ +V + + G SFMLHQIRK+VGTAVAV R + D ++L+L
Sbjct: 184 RYILSFKCAGTMNLEGQQWVRMVVVGQSFMLHQIRKLVGTAVAVMRGVATPDAITLALDP 243
Query: 388 FTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPEL 447
+V P+AP L L F + R V L + ++V+ F + P +
Sbjct: 244 ARVVVTPMAPELGLFLDECVFESYNDRWGNDREACVRLAAFQ---DQVDAFKRERIYPHI 300
Query: 448 SKFLDSSKSPWVEWV 462
+ + D+ W+
Sbjct: 301 ASY-DAKNGTNAAWL 314
>L1IUW8_GUITH (tr|L1IUW8) Uncharacterized protein OS=Guillardia theta CCMP2712
GN=GUITHDRAFT_113769 PE=4 SV=1
Length = 508
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 53/360 (14%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+K+ + + +GY GT Y GLQI L TI+ E+ + Y AG I DSN D K+KW
Sbjct: 9 LIKRNLALLLGYKGTKYHGLQI--SAQGLPTIQGEIFNSFYTAGMISDSNKDDSQKLKWS 66
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
SSRTDKGVH+ + SFK+ + E + R R N +LP IR+ K
Sbjct: 67 SSSRTDKGVHTSFCVCSFKLLMDETP--QYRVSPAEIQRWNTFLPGDIRILQAFRLSKNA 124
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKY 236
C R+Y YL+P +++ + +SE LL AFEG H FHN++ + +
Sbjct: 125 RINNMCTQREYEYLVPFNVLNGRP----------VSELKRLLKAFEGTHRFHNFS-GALF 173
Query: 237 RKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXX 296
R+K+ +G SN G D + L K+
Sbjct: 174 REKNQKSCGGEDGAESN--GEEDNADGDGGRKRSAD-----AAGLEAKETRWKGLRAKYH 226
Query: 297 NDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVE-------- 348
F+ ++ W + + R+N + + Q + KD ++
Sbjct: 227 EAFASRD--------WKWPVTDETRMNRQEYVRTIYSVEVDDQPIRIKDEIDQAETDFYV 278
Query: 349 IKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
I++ G SF +HQIRKMV L ++L + +PLAPPE LIL G +F
Sbjct: 279 IRLKGVSFAMHQIRKMV---------------LEIALSSHFLVSVPLAPPEPLILVGASF 323
>D7KJ05_ARALL (tr|D7KJ05) tRNA pseudouridine synthase family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472264
PE=4 SV=1
Length = 557
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 163/384 (42%), Gaps = 52/384 (13%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ ++ V + + G Y+G+Q TIE ELE A++ AG + D++ +W
Sbjct: 55 YRRRKVAIVFAFCGVGYQGMQKNPG---AKTIEGELEEALFHAGAVPDADRNKPRNYEWA 111
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RS+RTDKGV ++ ++S + + D G V R+N LP+ IRVFG F
Sbjct: 112 RSARTDKGVSAVGQVVSGRFYV-------DPPGFV--ERLNSKLPDQIRVFGYKRVAPSF 162
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-EFNSLLSAFEGEHPFHNYTVRSK 235
++ C+ R+Y YL+P + H + + + E+ + FE + ++S
Sbjct: 163 SSKKLCDRRRYVYLIPVFALDPCVHSEAEMVRTDLGYEYVKCVECFEKGYKIP-VGIQSD 221
Query: 236 YRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXX 295
+ + G + DV D +TT + D
Sbjct: 222 ISLSNF--DALGTDVKCETLSSSVPNVESNLNSEVLDVADVSATTEKNPDSSSKAEDMEE 279
Query: 296 XNDFSHQNSSLVVR-------------ARWLYEPDEADRLN--VSHF------------- 327
N S + S+++ + +++ Y E +R N +S++
Sbjct: 280 SNLDSSKESNILAKEEMNNGEGGDMTESKFCYGEKEKERFNRILSYYVGSHNFHNFTTRT 339
Query: 328 --------RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRD 379
R I + + L GKD+V+ ++ G SFMLHQIRKM+G AVAV RN P
Sbjct: 340 KAADPAANRYILSFNANTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPES 399
Query: 380 ILSLSLIKFTRIVLPLAPPEVLIL 403
++ + K RI +P+AP L L
Sbjct: 400 LIETAFKKDVRINVPMAPEVGLYL 423
>B9INP6_POPTR (tr|B9INP6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_574508 PE=4 SV=1
Length = 117
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 83/128 (64%), Gaps = 22/128 (17%)
Query: 364 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 423
M+GTAVAVKR + PRD++ LSL KF+RI+LPLAP EVLI RGN F + ++G+ RPEM
Sbjct: 1 MLGTAVAVKREIFPRDLIMLSLSKFSRIILPLAPTEVLISRGNDFPLIQNSGEGKRPEME 60
Query: 424 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 483
+VES EEF MLP W EWVE L KY+S A+LDEVR AW
Sbjct: 61 RMVES-------EEFS---MLP-----------LWKEWVENLHKYTS-VHAQLDEVRNAW 98
Query: 484 RTWKENFR 491
+ WKENF+
Sbjct: 99 KVWKENFQ 106
>F0WU32_9STRA (tr|F0WU32) tRNA pseudouridine synthase OS=Albugo laibachii Nc14
GN=AlNc14C264G9855 PE=3 SV=1
Length = 463
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 36/200 (18%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
V Y G Y G+Q+ ++TIE ELE A+++AGGI D+N+G L K+ W R++RTDKGV
Sbjct: 78 VAYCGEKYSGMQLNEG---VATIEAELERALFQAGGISDANYGFLQKIGWSRAARTDKGV 134
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLAN---RINIYLPNTIRVFGILPSKKRFDPRREC 182
H+ +++ K+ + EDR+G + +IN LP+ IRV ++ K F+ + C
Sbjct: 135 HAAGQLVTAKLSFDSKS-SEDRNGEQIKGFIEKINASLPSDIRVMDMVTVTKNFNAKLSC 193
Query: 183 NLRKYSYLLPADII-GIQSHFSEDEI-------------DFHI---------------SE 213
+ R Y YL+P + G Q +D + D H+ +
Sbjct: 194 DYRTYEYLIPTFVFAGRQRKDHKDPVKVTQAEEIVPKTTDLHLDVNHQQAYRMSTEQYDD 253
Query: 214 FNSLLSAFEGEHPFHNYTVR 233
N +L+ FEG H FHN+T +
Sbjct: 254 LNRILAKFEGSHTFHNFTSK 273
>F4PR36_DICFS (tr|F4PR36) Putative uncharacterized protein OS=Dictyostelium
fasciculatum (strain SH3) GN=DFA_01983 PE=4 SV=1
Length = 604
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 13/179 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K V M YVGT + GL+ +E + +E LE A++ +G I +NFGD+ ++KW RS
Sbjct: 153 KTPVAMLFSYVGTGHFGLEYTYEE-KYPALENYLEKALFLSGMILPTNFGDVTRIKWSRS 211
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGV-VLANRINIYLPNTIRVFGILPSKKRFD 177
SRTDKGVHSL+T+I + I + + ++GV ++IN YLP T+ + + + + F
Sbjct: 212 SRTDKGVHSLSTIIGASILINREKI-QTKEGVRAYIDQINSYLPPTLHIVSMATTSRSFM 270
Query: 178 PRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNS-LLSAFEGEHPFHNYTVRSK 235
PRR+ + R Y Y+LP +G Q F + E N +LS F G + +HN+T K
Sbjct: 271 PRRQTSSRTYHYVLPKKFLGNQ---------FTLQEINEKILSLFIGTNSYHNFTTLRK 320
>M4DH09_BRARP (tr|M4DH09) tRNA pseudouridine synthase OS=Brassica rapa subsp.
pekinensis GN=Bra015786 PE=3 SV=1
Length = 442
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 160/368 (43%), Gaps = 81/368 (22%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
++ V + + + G Y G+Q TIE ELE A+++AG + +++ G + + R
Sbjct: 20 RRKVAIILAFCGVGYLGMQRNPG---AKTIEGELEEALFRAGAVTETDRGKPKQYDFTRC 76
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S + + D G V +R+N LP+ IRVFG ++F
Sbjct: 77 ARTDKGVSAVGQVVSGRFLV-------DPPGFV--DRLNANLPDQIRVFGYKRVPEKFSS 127
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRK 238
++ C+ R+Y YLLP + +H + + + + FE
Sbjct: 128 KKFCDRRRYVYLLPVFALDPLTHRDREAVMASLGSGEEYVKCFEC--------------- 172
Query: 239 KHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXND 298
RK+ G++ G D F S +L + +D
Sbjct: 173 SERGRKNKITGVVGKLKG-----------------DHFESKSLDVR------------SD 203
Query: 299 FSHQNSSLVVRARWLYEPDEADRLN--VSHF---------------------RKISQCSC 335
+ NS + +++ Y +E +R N +S++ R I +
Sbjct: 204 ITSNNSCAL--SKFCYGEEEKERFNRILSYYVGSYNFHNFTTRIKADDPAANRSIISFTA 261
Query: 336 GKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPL 395
+ L G D+++ ++ G SFMLHQIRKM+G AVA+ RN P +++ + K I +P+
Sbjct: 262 NTVISLDGIDFIKCEVLGQSFMLHQIRKMMGLAVAIMRNCAPESLINTAFSKDVNITVPM 321
Query: 396 APPEVLIL 403
AP L L
Sbjct: 322 APEVGLYL 329
>F4PY29_DICFS (tr|F4PY29) Putative uncharacterized protein OS=Dictyostelium
fasciculatum (strain SH3) GN=DFA_00267 PE=4 SV=1
Length = 568
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K V M YVGT Y GL+ + T+E LE A++ +G I +NFGD ++ W RS
Sbjct: 129 KTPVNMLFAYVGTGYHGLEFHMTDQDYPTLENCLERALFLSGMILPTNFGDPSRLNWRRS 188
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
SRTDKGVHS++T+I +EI IN LP+ +R+ + +KK FDP
Sbjct: 189 SRTDKGVHSMSTIIKANLEIDRSRMLTPEKIADYVALINSNLPDALRIISMEMTKKSFDP 248
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSK 235
RR+ R Y Y+LP +G ++ DEI+ +L F G +HN+T++ +
Sbjct: 249 RRQGIARTYHYVLPKKYLG--DRYTLDEIN------QIILPMFIGNFSYHNFTLKRR 297
>Q54TQ3_DICDI (tr|Q54TQ3) tRNA pseudouridine synthase OS=Dictyostelium discoideum
GN=DDB_0204564 PE=4 SV=1
Length = 504
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 61 TVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSR 120
+V M GY GT Y GL Q D + +IE +E +++ G I SN G+L ++KW SSR
Sbjct: 90 SVAMVFGYDGTGYYGLGYQVD-IKYPSIENLIEKVLFRCGHILPSNVGELKRLKWSHSSR 148
Query: 121 TDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRR 180
TDKGVHSLAT+IS + + ++ +K D + + + IN YLP++IR+F + F R+
Sbjct: 149 TDKGVHSLATVISCFLVVDDNTFKNDINQTFI-DTINNYLPSSIRLFSACKVSRSFQARK 207
Query: 181 ECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVR 233
+ R Y+Y++P++ + + I E N +L F G + +HN+T +
Sbjct: 208 KGIERSYNYMVPSEYLN----------NIKIDEMNKILQNFIGINSYHNFTSK 250
>M3K4V8_CANMA (tr|M3K4V8) Pseudouridylate synthase OS=Candida maltosa Xu316
GN=G210_4648 PE=4 SV=1
Length = 508
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y GLQ+Q DE+ + TIE+++ TA+ +AG I N DL K + R+
Sbjct: 64 KRKVAVMIGYCGTGYNGLQVQNDEN-VKTIEQDIYTAMIEAGAISKENAMDLKKSGFQRA 122
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM I ED D + +IN +LP IRV+GI + K FD
Sbjct: 123 ARTDKGVHAAGNVISLKMII------EDPD---IMKKINDHLPKQIRVWGIQRTTKGFDC 173
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 174 RKCCSSRVYEYLLPT 188
>D8TRD2_VOLCA (tr|D8TRD2) Putative uncharacterized protein OS=Volvox carteri
GN=VOLCADRAFT_104122 PE=4 SV=1
Length = 669
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+K+++ + VGYVGT ++GLQ+ R ST+E+ LE A+++AG I +SNFGDL KVKW
Sbjct: 217 MVKRSIALHVGYVGTAFKGLQVNRSGAPDSTVEEVLERAVFEAGLIAESNFGDLKKVKWS 276
Query: 117 RSSRTDKGVHSLATMISFKMEIPED-AWKEDRDGVVLANRINIYLPNTIRVFGILPSKKR 175
R+SRTDKGVHS++T++ ++ + D + D +G+ +A +N LP +RVF +K+
Sbjct: 277 RNSRTDKGVHSVSTVVGLRVLLRGDEGFDLDPEGLEVAADLNTRLPPQVRVFSAQRVQKK 336
Query: 176 FD 177
F+
Sbjct: 337 FN 338
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 307 VVRARWLYEP--DEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIR 362
V RWLYE D+ DR+ V HFR I+ + L+ G V +++ G SFMLHQIR
Sbjct: 441 VQSCRWLYEKSEDKRDRVTVRHFRTITSFTADDPAPLVPGGVPCVRLRVRGMSFMLHQIR 500
Query: 363 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 408
M+G A+AV R +P +L SL R+ +P APP LIL G TF
Sbjct: 501 HMIGGALAVARGSLPLPLLRASLAGQARVTVPRAPPHTLILAGCTF 546
>R7QMB7_CHOCR (tr|R7QMB7) Stackhouse genomic scaffold, scaffold_52 OS=Chondrus
crispus GN=CHC_T00006828001 PE=4 SV=1
Length = 375
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + V Y G Y GLQ + T+ LETA++ AG I D N G L K+KW +
Sbjct: 50 KRKVALLVAYDGAKYHGLQRNAG---VDTVSDVLETALHGAGAISDDNLGFLPKIKWQVA 106
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+GV + ++S K+ +D + + R+N LP+ +R+FGI + F
Sbjct: 107 ARTDRGVSAAGNVVSAKLLFNKDEQESGAAFELTTARVNAELPDHVRLFGIKYTTSSFSA 166
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
+ C R Y Y+LP + ++ H S +++F L+ FEG H FHNYTV
Sbjct: 167 KASCGERWYEYMLP--LSALRGHKS-------LAQFRDTLNLFEGSHRFHNYTV 211
>D8LBC7_ECTSI (tr|D8LBC7) tRNA Pseudouridine Synthase OS=Ectocarpus siliculosus
GN=PUS PE=4 SV=1
Length = 677
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + + Y G +Y+GLQI + TIE ELE A+Y AG I NFG+ KV W R+
Sbjct: 190 KKKVALLISYWGNNYQGLQINKGAR---TIEAELELALYLAGTISKDNFGNPRKVSWSRA 246
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
RTDKGVH+ A +IS K+ D +E +IN YLP+ IR I + K FD
Sbjct: 247 GRTDKGVHAAAQVISVKLTYLNDGERE------TVEKINKYLPDDIRAVDIRRAPKSFDS 300
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSE 204
R C+ R+Y Y++P ++ +++ ++
Sbjct: 301 RTRCSGRRYEYIMPTYVLAPKAYVTD 326
>H8X8J4_CANO9 (tr|H8X8J4) Pus1 protein OS=Candida orthopsilosis (strain 90-125)
GN=CORT_0F02440 PE=4 SV=1
Length = 554
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + +GY GT Y GLQIQ +E + TIEK+L A YKAG I N DL K + R+
Sbjct: 90 KRKCAVMLGYCGTGYNGLQIQ-NEPGVKTIEKDLYEAFYKAGAISLENSLDLKKSGFQRT 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S KM I ED D L ++IN +LP+ IR++GI + K FD
Sbjct: 149 ARTDKGVHAAGNVVSLKMII------EDPD---LKDKINQHLPDQIRIWGIQRTTKGFDC 199
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 200 RKMCSSRVYEYLLPT 214
>G8B532_CANPC (tr|G8B532) Putative uncharacterized protein OS=Candida
parapsilosis (strain CDC 317 / ATCC MYA-4646)
GN=CPAR2_601440 PE=4 SV=1
Length = 554
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + +GY GT Y GLQIQ +E + TIEK+L A YKAG I N DL K + R+
Sbjct: 89 KRKCAVMLGYCGTGYNGLQIQ-NEPGVKTIEKDLYEAFYKAGAISLENSLDLKKSGFQRT 147
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ I ED L ++IN YLP+ IR++GI + K FD
Sbjct: 148 ARTDKGVHAAGNVVSLKL-IIEDPQ--------LKDKINSYLPDQIRIWGIQRTTKGFDC 198
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 199 RKMCSSRVYEYLLPT 213
>L1LFX5_BABEQ (tr|L1LFX5) tRNA pseudouridine synthase OS=Babesia equi
GN=BEWA_043680 PE=3 SV=1
Length = 468
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 152/352 (43%), Gaps = 42/352 (11%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQ-----RDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
K + GY+GT Y G Q Q D +++ TIE +E+A+ + G I + K+
Sbjct: 85 KAKYAIAFGYLGTRYHGYQKQVEYGTGDMNKVETIEGTMESALVEIGAINEVYRNLPYKL 144
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
+ +SSRTDKGVH+ T I+ + EIPE + ++N LPN IR F I+
Sbjct: 145 QLSKSSRTDKGVHAGCTYIAGRFEIPELEEEVGTKEEFFIRKLNDALPNDIRCFQIVRVT 204
Query: 174 KRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFE-GEHPFHNYTV 232
K FD R C+ RKY Y++P I+ + F D+ + +SL S ++ + P V
Sbjct: 205 KGFDARTMCSKRKYEYIIPEKILLKRYKFGSDKYKELHNNLSSLFSQYDKSKDPIKLSKV 264
Query: 233 RSKYRKKHHARKSPGNGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXX 292
+Y H G + T DF + T+ K Q
Sbjct: 265 EGEYNMDH--------GFYEDST--LDIELIKEIMDMYVGTHDFQNFTVRQKVQGSTT-- 312
Query: 293 XXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSH-FRKISQCSCGKLQRLLGKDYVEIKI 351
R++++ + + +S+ F +I + G Q + V I I
Sbjct: 313 -----------------QRYIHKT-KVNIFTLSNIFHQIKKDVIGNGQNV-----VRITI 349
Query: 352 WGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 403
G SF+ +QIRKM+ A+ NL P+ ++ SL + +AP E L+L
Sbjct: 350 VGQSFLYNQIRKMISMAIETYLNLAPKSTIAFSLFNNRILNTNIAPSEGLVL 401
>C1N7G7_MICPC (tr|C1N7G7) tRNA pseudouridine synthase (Fragment) OS=Micromonas
pusilla (strain CCMP1545) GN=MICPUCDRAFT_3609 PE=3 SV=1
Length = 313
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + + YVG Y+G+Q R+ + TIE ELE AI AGGI D N GD KV+W R+
Sbjct: 1 KRKVAIFLAYVGKGYQGMQ--RNPGAV-TIEDELEKAIVAAGGISDLNAGDFAKVQWMRA 57
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ +S +M I D GV+ +R+N LP FG F+
Sbjct: 58 ARTDKGVSAVGQCVSLRMVI-------DPPGVI--DRVNAALPEGFEFFGYERVTGGFNA 108
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSED-----EIDFHISE-FNSLLSAFEGEHPFHNYTV 232
+ C+ R+Y Y++P ++ S+D E D + + N +L + G H FHN+TV
Sbjct: 109 KTMCDRRRYEYVVPVKAFDPRAKNSDDASPPFEFDETMRQRVNKILGNYVGTHNFHNFTV 168
Query: 233 R 233
R
Sbjct: 169 R 169
>A5E5G0_LODEL (tr|A5E5G0) tRNA pseudouridine synthase OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=LELG_04849 PE=3 SV=1
Length = 445
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 10/128 (7%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY GT Y GLQIQ D + + TIE++L TA++KAG I N DL K + R +RTDKGV
Sbjct: 2 LGYCGTGYNGLQIQNDPN-VKTIERDLYTALHKAGAISLENSLDLKKSGFQRCARTDKGV 60
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ ++S KM I + KE +IN +LP IR++GI + K FD R+ C+ R
Sbjct: 61 HAAGNVVSLKMIIEDPEIKE---------KINEHLPQQIRIWGIQRTTKGFDCRKMCSSR 111
Query: 186 KYSYLLPA 193
Y YLLP
Sbjct: 112 VYEYLLPT 119
>K3WAT4_PYTUL (tr|K3WAT4) tRNA pseudouridine synthase OS=Pythium ultimum
GN=PYU1_G002073 PE=3 SV=1
Length = 492
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 48/206 (23%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+ + G +Y G+Q+ + TIE ELE A+++AGGI ++N+G L KV W R++RTDKGV
Sbjct: 84 LAFCGKNYSGMQMNEG---VKTIEAELERALFEAGGISEANYGFLQKVGWSRAARTDKGV 140
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +++ K+ + +D ++N LP IRV ++ K F+ + C+ R
Sbjct: 141 HAAGQLLTAKLHVGDDI-------PAFVEKVNAVLPEDIRVMKMVTVTKNFNAKMSCDQR 193
Query: 186 KYSYLLPADIIGIQS------------------HFSEDEIDFHI----------SEF--- 214
Y YL P I G +S H +E+ +D ++ EF
Sbjct: 194 TYEYLAPTFIFGKRSRAPVSSDGADSREWPSGVHDTEEGVDMNVVIDDETLKQHQEFRMD 253
Query: 215 -------NSLLSAFEGEHPFHNYTVR 233
N +L ++G H FHN+T +
Sbjct: 254 DDTYELLNKVLGLYKGTHNFHNFTSK 279
>F4PH32_DICFS (tr|F4PH32) tRNA pseudouridylate synthase OS=Dictyostelium
fasciculatum (strain SH3) GN=pus1 PE=4 SV=1
Length = 542
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK + VGY GT+Y G+Q STIE+ELE A +K G I +NF K+ W R
Sbjct: 115 KKKIAFCVGYSGTNYCGMQ---KNWGYSTIEEELEKACFKTGSISPNNFYSQRKIDWIRC 171
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ M+S K+E +E L N IN +LP I+VFGI F
Sbjct: 172 ARTDKGVSAVRNMVSCKLEYDPPTLEE------LKNAINSHLPEDIKVFGIKRVNNSFHA 225
Query: 179 RRECNLRKYSYLLPA-------DIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
+ + R Y Y+ P G + DE + S NS+L+ F G H FHNYT
Sbjct: 226 KNCVDGRSYLYITPTFAFEPVHATSGRPETYKFDETE--RSRVNSMLAMFLGTHKFHNYT 283
Query: 232 VR 233
R
Sbjct: 284 SR 285
>A4S9Q6_OSTLU (tr|A4S9Q6) tRNA pseudouridine synthase (Fragment) OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_2261 PE=3 SV=1
Length = 308
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + YVG Y G+Q + TIE ELE AI +AGGI D+N GD KV+W R+
Sbjct: 2 KRKCAVTFAYVGAGYAGMQRNPG---VRTIEGELEGAIARAGGISDANAGDFAKVQWTRA 58
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ +++ KM + E RIN LP VFGI F+
Sbjct: 59 ARTDKGVSAVGQVVALKMVLEPSGMVE---------RINAALPERFEVFGIDRVTGGFNA 109
Query: 179 RRECNLRKYSYLLPA-----DIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVR 233
+ C+ R+Y Y++P ++ + + + S + +L + G H FHNYTV+
Sbjct: 110 KTMCDRRRYEYVIPTRAFDPNLGAEGAAEAFAFTEETRSRVDGVLKNYCGTHNFHNYTVK 169
Query: 234 SK 235
K
Sbjct: 170 VK 171
>D7KT99_ARALL (tr|D7KT99) tRNA pseudouridine synthase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476762 PE=3 SV=1
Length = 458
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 154/371 (41%), Gaps = 39/371 (10%)
Query: 60 KTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSS 119
+ V + + G Y+G+Q TIE ELE A++ AG + +S G + RS+
Sbjct: 22 QKVAIIFAFCGVGYQGMQ---KNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSA 78
Query: 120 RTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPR 179
RTDKGV ++ ++S + + D G V +R+N LPN IR+FG F +
Sbjct: 79 RTDKGVSAVGQVVSGRFNV-------DPPGFV--DRLNSNLPNQIRIFGYKHVTPSFSSK 129
Query: 180 RECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFE-GEHPFHNYTVRSKYRK 238
+ C+ R+Y YLLP + SH + + + + FE E + ++
Sbjct: 130 KFCDRRRYVYLLPVFALDPISHRDRETVMASLGPGEEYVKCFECSERGRKIPGLVGNWKG 189
Query: 239 KHHARKSPG--NGIMSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXX 296
+ KS + I+SN + V +G +
Sbjct: 190 TNFVTKSLDFQSDILSNNSSALRTDVKIEALSSNLASLSSVDVEVGSIQEDSCKLNTNST 249
Query: 297 NDFSHQNSSLV-VRARWLYEPDEADRLN------VSHF-----------------RKISQ 332
+ + + + ++++ Y E +R N V + R+I
Sbjct: 250 EKINGEGNVMAETKSKFCYGEKEKERFNRILSCYVGSYNFHNFTTRTKADDPAANRQIIS 309
Query: 333 CSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIV 392
+ + L G D+++ ++ G SFMLHQIRKM+G AVA+ RN ++ + K I
Sbjct: 310 FTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQTAFSKDVNIT 369
Query: 393 LPLAPPEVLIL 403
+P+AP L L
Sbjct: 370 VPMAPEVGLYL 380
>M1VGQ4_CYAME (tr|M1VGQ4) Similar to tRNA-pseudouridine synthase I
OS=Cyanidioschyzon merolae strain 10D GN=CYME_CMH251C
PE=4 SV=1
Length = 773
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 33/199 (16%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRL--------------------STIEKELETAIYK 98
K+ + + GY GT++RG Q+ R T+E EL A+Y+
Sbjct: 89 KRNIALWFGYAGTEFRGSQVLEPRRRQPVATAANEAGSGDRAVDLRDGTVEGELAQALYR 148
Query: 99 AGGIRDSNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGV--VLANRI 156
G + + NF L K+ W R+SRTDKGVH++A ++S K+ + D + + +R+
Sbjct: 149 IGAVTELNFMKLSKICWSRASRTDKGVHAVANVVSAKLLLDLRRDLTSNDELTDLFVDRL 208
Query: 157 NIYLPNTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNS 216
N LP IRVFG K F R C LR+Y YLLP + +D F
Sbjct: 209 NAQLPPNIRVFGGQRMSKGFRARSACTLREYDYLLPRWV-----------LDGREDLFLQ 257
Query: 217 LLSAFEGEHPFHNYTVRSK 235
L FEG H FHN++ + +
Sbjct: 258 ALRCFEGTHRFHNFSGKER 276
>R7QUC6_CHOCR (tr|R7QUC6) Stackhouse genomic scaffold, scaffold_7 OS=Chondrus
crispus GN=CHC_T00007304001 PE=4 SV=1
Length = 892
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 11/177 (6%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY+G +Y G+Q+ + TIE+ L +A Y+AG I ++N L KV W R+
Sbjct: 30 KRKVAVFLGYIGENYYGMQMNPG---VITIEQVLLSAFYRAGLISEANKDSLSKVNWMRA 86
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + +S K+E + K GVV A IN +LP + V+G++ + F+
Sbjct: 87 ARTDKGVSAAGQCVSAKLEC--EVEKNIAPGVVEA--INHHLPADVMVYGLMRATAAFNA 142
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDE----IDFHISEFNSLLSAFEGEHPFHNYT 231
R +C+ R+Y Y+ P ++G + ++E D + F ++L +EG H F ++T
Sbjct: 143 RMDCHRRRYEYMFPVRLLGGPNEVMKEEEPGAGDPRAARFTNILKRYEGTHCFASFT 199
>F0YHR5_AURAN (tr|F0YHR5) tRNA pseudouridine synthase (Fragment) OS=Aureococcus
anophagefferens GN=AURANDRAFT_12283 PE=3 SV=1
Length = 239
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + + +GY G +Y GLQ Q E L TIE L+ A+ +AG + + N GDL K+ W R+
Sbjct: 5 KRKLALLLGYRGANYYGLQKQSKESDLPTIELALQEALNRAGAVHEGNQGDLSKIGWSRA 64
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDK V + ++S K+E+ E+ D L R+N LP+ I+VF + K F+
Sbjct: 65 ARTDKRVSAARQVVSAKLEV------ENDDVPALLERLNGELPDDIKVFDAVRVIKGFNC 118
Query: 179 RRECNLRKYSYLLPADII----GIQSHFS--EDEIDFH------ISEFNSLLSAFEGEHP 226
++ C+ R Y+YLLP ++ I + F + H + L+A+ G
Sbjct: 119 KQSCDRRHYTYLLPTFLLAPDEAIDAAFDAVAQRLAPHRAAPTLLERLRGFLAAYVGTRK 178
Query: 227 FHNYTVRSK 235
+HN+T + K
Sbjct: 179 YHNFTNKLK 187
>A5DR71_PICGU (tr|A5DR71) tRNA pseudouridine synthase OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_05772 PE=3
SV=2
Length = 477
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V +GY GT Y G+QIQ + + TIE +L A KAG I N DL K + R+
Sbjct: 28 KKKVACMIGYCGTGYNGMQIQNNPD-VKTIEGDLFDAFVKAGAISPENADDLKKNAFMRA 86
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED+D + RIN +LP+ IRV+GI + K FD
Sbjct: 87 ARTDKGVHAAGNVISCKLII------EDQD---ILQRINSHLPDQIRVWGIERTNKSFDC 137
Query: 179 RRECNLRKYSYLLP 192
R+ C+ R Y YLLP
Sbjct: 138 RKMCSSRVYEYLLP 151
>G3Q032_GASAC (tr|G3Q032) tRNA pseudouridine synthase OS=Gasterosteus aculeatus
GN=PUS1 PE=3 SV=1
Length = 421
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + V Y G Y G+Q + TIE EL A+ K+G I +++ ++ K+ + R
Sbjct: 77 KKKVALLVAYSGKGYYGMQRNTGTSQFRTIEDELVAALIKSGCIPENHGDEMKKMSFQRC 136
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED +IN +LP IRV G+ + F+
Sbjct: 137 ARTDKGVSAAGQVVSLKLRLIEDT----------VEKINEHLPQQIRVLGLKRVTQGFNS 186
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYT 231
+ C+ R Y+Y+LP + + + D F + + NSL S ++G H FHN+T
Sbjct: 187 KNNCDARTYAYMLPTVAFSSKDYDTADTAAFRLEPETLQKVNSLFSLYKGTHNFHNFT 244
>G3Q027_GASAC (tr|G3Q027) tRNA pseudouridine synthase OS=Gasterosteus aculeatus
GN=PUS1 PE=3 SV=1
Length = 392
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + V Y G Y G+Q + TIE EL A+ K+G I +++ ++ K+ + R
Sbjct: 48 KKKVALLVAYSGKGYYGMQRNTGTSQFRTIEDELVAALIKSGCIPENHGDEMKKMSFQRC 107
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED +IN +LP IRV G+ + F+
Sbjct: 108 ARTDKGVSAAGQVVSLKLRLIEDT----------VEKINEHLPQQIRVLGLKRVTQGFNS 157
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYT 231
+ C+ R Y+Y+LP + + + D F + + NSL S ++G H FHN+T
Sbjct: 158 KNNCDARTYAYMLPTVAFSSKDYDTADTAAFRLEPETLQKVNSLFSLYKGTHNFHNFT 215
>G4YFE8_PHYSP (tr|G4YFE8) tRNA pseudouridine synthase OS=Phytophthora sojae
(strain P6497) GN=PHYSODRAFT_308307 PE=3 SV=1
Length = 497
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
V + G +Y G+Q+ + TIE ELE A+++AGGI +SN+G L K+ W R++RTDKGV
Sbjct: 77 VAFCGKNYSGMQMNEG---VKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGV 133
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +++ K+ + EDA D ++N LP IRV ++ K F+ + C+ R
Sbjct: 134 HAAGQLLTAKLHVGEDA-----DIPAFVGKVNAALPEDIRVMHMVTVTKNFNAKMTCDQR 188
Query: 186 KYSYLLP 192
Y YL P
Sbjct: 189 TYEYLAP 195
>H9HBG7_ATTCE (tr|H9HBG7) tRNA pseudouridine synthase OS=Atta cephalotes PE=3
SV=1
Length = 400
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 40/203 (19%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
+K M +GYVG DY G+Q + TIE++L TA+ KA I F ++ + + R+
Sbjct: 60 RKNHAMLLGYVGKDYYGMQRNPG---MKTIEEDLITALLKADLITKEQFENIRAINFQRA 116
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S K+ PE++ K IN +LP+ IRVFGI K F+
Sbjct: 117 ARTDKGVSAIRQIVSLKL--PENSNK---------TTINQFLPDAIRVFGIKRVTKGFNS 165
Query: 179 RRECNLRKYSYLLPA--------DIIGIQSHFSEDE-------------IDFHIS----- 212
+ +C+ R Y Y++P+ ++ + EDE D+ +S
Sbjct: 166 KNKCDARTYRYIIPSYAFALEDQSLLKLGEEVDEDERIKQLSIIDGKPYTDYRLSPESLD 225
Query: 213 EFNSLLSAFEGEHPFHNYTVRSK 235
+ NS+L FEG H FHN+T + K
Sbjct: 226 KLNSILKLFEGSHNFHNFTSKVK 248
>H9K7G2_APIME (tr|H9K7G2) tRNA pseudouridine synthase OS=Apis mellifera
GN=LOC551700 PE=3 SV=1
Length = 366
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 19/174 (10%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTD 122
VM +GY+G +Y G+QI R + TIE L +A+ KA I + F DL ++K+ R++RTD
Sbjct: 50 VMVLGYLGKNYSGMQINRG---IKTIEGSLLSALLKADFITKNEFEDLKEIKFQRAARTD 106
Query: 123 KGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRREC 182
KGV ++ ++S +++P KED IN +LP I+VF I + F+ + +C
Sbjct: 107 KGVSAVRQIVS--LQLPNHVNKED---------INKHLPKDIKVFDIKRVTRNFNSKNKC 155
Query: 183 NLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ R Y Y+LP + + + +F ++ + N +L FEG H FHN+T
Sbjct: 156 DARTYRYVLPTFALASEDPNGKPYNEFRLNSDMLDKLNEILKLFEGTHNFHNFT 209
>B5X747_SALSA (tr|B5X747) tRNA pseudouridine synthase OS=Salmo salar GN=TRUA PE=2
SV=1
Length = 392
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ VV+ + Y G Y G+Q + TIE EL TA+ K+G I D++ D+ K+ + R
Sbjct: 49 KRKVVLLLAYSGKGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRC 108
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED + +IN LP IRV G+ F+
Sbjct: 109 ARTDKGVSAAGQVVSLKLWMIED----------VMEKINSNLPPQIRVLGLKRVTGGFNS 158
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYT 231
+ C+ R YSY+LP + +++++ F + N L +++G H FHN+T
Sbjct: 159 KNSCDARTYSYMLPTVAFSPKDYYTKNYAAFRLEPETLQRVNQLFGSYKGTHNFHNFT 216
>C1EFK8_MICSR (tr|C1EFK8) tRNA pseudouridine synthase (Fragment) OS=Micromonas
sp. (strain RCC299 / NOUM17) GN=MICPUN_69585 PE=3 SV=1
Length = 294
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + + YVG Y+G Q TIE ELE AI AGGI N GD KV+W R+
Sbjct: 4 KRKIAAFLAYVGKGYQGFQRNPGAR---TIEDELERAIVAAGGISADNAGDFTKVQWTRA 60
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ I+ +M + D GV+ RIN LP ++FG F+
Sbjct: 61 ARTDKGVSAVGQCIALRMVL-------DPPGVL--ERINAALPEGFKIFGYKRVTGGFNA 111
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEF----------NSLLSAFEGEHPFH 228
+ C+ R+Y Y++P + E D F N +L + G H FH
Sbjct: 112 KTMCDRRRYEYVIPTCAFDPRRCLPRREDDKEAKAFVFDEELRARVNKILGNYCGTHNFH 171
Query: 229 NYTVR 233
NYTVR
Sbjct: 172 NYTVR 176
>C5M8T8_CANTT (tr|C5M8T8) tRNA pseudouridine synthase OS=Candida tropicalis
(strain ATCC MYA-3404 / T1) GN=CTRG_02810 PE=3 SV=1
Length = 427
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 14/130 (10%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY GT Y G+Q+Q D + + TIEK++ A+ KAG I N DL K ++ R++RTDKGV
Sbjct: 2 LGYCGTGYNGMQVQNDPN-VKTIEKDVYEAMVKAGAISKENSTDLKKSQFQRAARTDKGV 60
Query: 126 HSLATMISFKM--EIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECN 183
H+ +IS KM E PE + N+IN LP IR++GI + K FD R+ C+
Sbjct: 61 HAAGNVISLKMIIEDPE-----------ILNKINDNLPEQIRLWGIQRTTKGFDCRKCCS 109
Query: 184 LRKYSYLLPA 193
R Y YLLP
Sbjct: 110 SRIYEYLLPT 119
>B9WIU7_CANDC (tr|B9WIU7) tRNA pseudouridine synthase OS=Candida dubliniensis
(strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 /
NRRL Y-17841) GN=CD36_62560 PE=3 SV=1
Length = 488
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY G+ Y G+Q+Q D + + TIEK++ A+ KAG I N DL K + R+
Sbjct: 38 KRKVAVMLGYCGSGYNGMQVQNDPN-VKTIEKDIYDAMTKAGAISLENSVDLKKSGFQRA 96
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM I ED + + N+IN LP IR++GI + K FD
Sbjct: 97 ARTDKGVHAAGNVISLKMII------EDPN---IINKINDLLPKQIRIWGIQRTTKGFDC 147
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 148 RKCCSSRIYEYLLPT 162
>J3SFI5_CROAD (tr|J3SFI5) tRNA pseudouridine synthase OS=Crotalus adamanteus PE=2
SV=1
Length = 404
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 16/191 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D+ + F KK VV+ + Y G Y G+Q + TIE +L +A+ K+G I +++ D+
Sbjct: 52 DEAKKFPKKKVVLLLVYCGKGYHGMQRNVKTSQYRTIEDDLVSALIKSGCIPENHGEDMK 111
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + ED + +IN +LP+ IR+ G+
Sbjct: 112 KMSFQRCARTDKGVSAAGQIVSLKVWLIED----------ILQKINEHLPSHIRILGLKR 161
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHP 226
+F+ + C+ R YSY+LP + +DE + +S N LL+ ++G H
Sbjct: 162 VTGKFNSKNRCDARTYSYMLPTFAFAHKDDAPQDET-YRLSAETLEAVNHLLACYKGTHN 220
Query: 227 FHNYTVRSKYR 237
FHN+T + R
Sbjct: 221 FHNFTSQKGPR 231
>D5G784_TUBMM (tr|D5G784) tRNA pseudouridine synthase OS=Tuber melanosporum
(strain Mel28) GN=GSTUM_00002510001 PE=3 SV=1
Length = 454
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 53 KWEPF------LKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSN 106
KWEP KK V + +GY GT YRG+Q+ H+ +IE +L A +AG I +N
Sbjct: 78 KWEPRNSEARRPKKKVAVLIGYCGTGYRGMQLN-PPHK--SIESDLFEAFVQAGAISKAN 134
Query: 107 FGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRV 166
D K R +RTDKGVH+ +IS K+ I ED D + +IN YLP IRV
Sbjct: 135 SDDPKKSSLVRCARTDKGVHAAGNVISLKLII------EDPD---ITEKINSYLPEQIRV 185
Query: 167 FGILPSKKRFDPRRECNLRKYSYLLPADII---GIQSHFSEDEIDFHISEFNSLLSAF-- 221
+GI+ + F +C+ R+Y YL+P+ +S+ ++ + F
Sbjct: 186 WGIVRTVGSFSSYHQCDSRRYEYLVPSHCFIPPHPKSYLAKKTYRISPKRLQRVREGFRS 245
Query: 222 -EGEHPFHNYTVRSKY 236
EG H FHN+T++ +
Sbjct: 246 YEGTHNFHNFTIQKTF 261
>M4BXA0_HYAAE (tr|M4BXA0) tRNA pseudouridine synthase OS=Hyaloperonospora
arabidopsidis (strain Emoy2) PE=3 SV=1
Length = 486
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
V + G +Y G+Q+ + TIE ELE A+++AGGI +SN+G L K+ W R++RTDKGV
Sbjct: 80 VAFCGKNYSGMQMNEG---VKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGV 136
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +++ K+ + E D + + ++N LP IRV ++ K F+ + C+ R
Sbjct: 137 HAAGQLLTAKLHVEEG----DENVLAFVAKVNSALPTDIRVLQMVTVTKNFNAKMMCDQR 192
Query: 186 KYSYLLPADIIGIQS 200
Y YL P I +S
Sbjct: 193 TYEYLAPTFIFAKRS 207
>E1ZUF7_CHLVA (tr|E1ZUF7) Putative uncharacterized protein OS=Chlorella
variabilis GN=CHLNCDRAFT_138514 PE=4 SV=1
Length = 346
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 308 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL---GKDYVEIKIWGDSFMLHQIRKM 364
V+ W +E D+AD + HFR I C G +L G+ + + + G SFMLHQIRKM
Sbjct: 154 VQVAWKFERDDADPIVRRHFRFIEWCRAGTELEVLVPGGQPCIHLSLQGSSFMLHQIRKM 213
Query: 365 VGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS--MRSSAGKFI---- 418
VG AVAV R +P ++L SL RI LPLAPP L+L G FS RS +G+
Sbjct: 214 VGMAVAVARGNLPLELLEFSLATPARINLPLAPPSTLMLTGALFSPFKRSWSGQAAVAAQ 273
Query: 419 -RPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELD 477
E++ L E + ++F MLP L L S + W W LD+ F +AE+
Sbjct: 274 WTGEVLQLKEQG--VAAQQQFLREAMLPALDSLLASEE--WRHWELDLDRL-WFDNAEVQ 328
Query: 478 EV 479
EV
Sbjct: 329 EV 330
>F0ZAZ5_DICPU (tr|F0ZAZ5) tRNA pseudouridine synthase OS=Dictyostelium purpureum
GN=DICPUDRAFT_45589 PE=3 SV=1
Length = 473
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 18/184 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY+G +Y G+Q L TIE+ELE AI+KAGGI N K+ W R
Sbjct: 67 KKKVAVLLGYLGKNYAGMQKNPG---LRTIEEELEMAIFKAGGILPDNLYFQHKIDWVRC 123
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV +L ++S KME+ E + +N LP I VF I+ F
Sbjct: 124 ARTDKGVSALRNVVSLKMEVGPPELDE------MVKALNKLLPEDIHVFKIMRVNNSFHA 177
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI--DFHISE-----FNSLLSAFEGEHPFHNYT 231
+ + R Y Y+ P + F+ +++ F +E N +LS + G H FHNYT
Sbjct: 178 KNGVDARSYVYVCPTS--AFEPKFATNKLVEPFKFTEETRETLNRVLSYYLGNHRFHNYT 235
Query: 232 VRSK 235
R +
Sbjct: 236 SRKE 239
>G8Y940_PICSO (tr|G8Y940) Piso0_004551 protein OS=Pichia sorbitophila (strain
ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 /
NRRL Y-12695) GN=Piso0_004551 PE=4 SV=1
Length = 549
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V +GY GT Y G+QIQ + + + TIE +L A AG I N DL K + R+
Sbjct: 68 KKKVACMIGYCGTGYNGMQIQNNPN-IETIEGDLFKAFVAAGAISPENADDLKKNGFMRA 126
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN LP+ IRV+GI + K FD
Sbjct: 127 ARTDKGVHAAGNVISCKLII------EDED---IIEKINAQLPDQIRVWGIERTNKSFDC 177
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 178 RKMCSSRVYEYLLPT 192
>G3UMT0_LOXAF (tr|G3UMT0) tRNA pseudouridine synthase (Fragment) OS=Loxodonta
africana PE=3 SV=1
Length = 370
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ VV+ + Y G Y G+Q R TIE +L +A+ ++G I +S+ D+ K+ + R
Sbjct: 26 KRKVVLLLAYSGKGYHGMQRNVRSSRFRTIEDDLVSALVQSGCIPESHGEDMKKMSFQRC 85
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S K+ + ED + +IN +LP+ IR+ G+ F+
Sbjct: 86 ARTDKGVSAVGQVVSLKVWLIED----------ILEKINNHLPSHIRILGLKRVTGGFNS 135
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y Y+LP + +DE F +S N LL+ F G H FHN+T
Sbjct: 136 KNRCDARTYCYMLPTFAFAHKDRDMQDE-SFRLSAETLQRVNELLACFRGTHNFHNFT 192
>G3AU83_SPAPN (tr|G3AU83) Putative uncharacterized protein OS=Spathaspora
passalidarum (strain NRRL Y-27907 / 11-Y1)
GN=SPAPADRAFT_157524 PE=4 SV=1
Length = 525
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + +GY GT Y G+Q+Q D + TIE++L A KAG I N D+ K + R+
Sbjct: 85 KRKCAVMIGYCGTGYNGMQLQNDP-TIKTIERDLYDAFGKAGAISRENAEDMKKSGFMRA 143
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ I ED D + +IN +LP+ IRV+GI + K FD
Sbjct: 144 ARTDKGVHAAGNVVSLKLII------EDPD---IVKKINEHLPDQIRVWGIQRTTKGFDC 194
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 195 RKLCSSRIYEYLLPT 209
>F0ZX60_DICPU (tr|F0ZX60) Putative uncharacterized protein OS=Dictyostelium
purpureum GN=DICPUDRAFT_156689 PE=4 SV=1
Length = 539
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Query: 58 LKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGR 117
+KK + GY GT + GL +D + IE +E A++ G I SN GDL ++KW R
Sbjct: 125 IKKPFALCFGYDGTGFYGLSYNKD-LKYKAIENAIEKALFINGHIAPSNVGDLSRIKWSR 183
Query: 118 SSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFD 177
SSRTDKGVHSL+T+IS + + E + + IN +LP ++R+ K F
Sbjct: 184 SSRTDKGVHSLSTLISCFILVDEKTNQREGLSKETIESINKHLPESVRLLSGTRISKSFR 243
Query: 178 PRRECNLRKYSYLLPADII-GIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV-RSK 235
RR R Y Y++P + GI I N +LS + G +HNYT R+
Sbjct: 244 ARRGVCERTYHYMVPKKYLEGIS-----------IDHMNEILSNYIGNFSYHNYTSQRNT 292
Query: 236 YRKKHHARKS 245
Y + + ++S
Sbjct: 293 YLAEKNKKQS 302
>C4YSR3_CANAW (tr|C4YSR3) tRNA pseudouridine synthase OS=Candida albicans (strain
WO-1) GN=CAWG_05132 PE=3 SV=1
Length = 461
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY GT Y G+Q+Q D + + TIEK++ A+ AG I N DL K + R++RTDKGV
Sbjct: 2 LGYCGTGYNGMQVQNDPN-VKTIEKDIYDAMATAGAISAENAVDLKKSGFQRAARTDKGV 60
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +IS KM I ED + + N+IN LP IR++GI + K FD R+ C+ R
Sbjct: 61 HAAGNVISLKMII------EDPE---IINKINDLLPKQIRIWGIQRTTKGFDCRKCCSSR 111
Query: 186 KYSYLLPA 193
Y YLLP
Sbjct: 112 IYEYLLPT 119
>F4W9T5_ACREC (tr|F4W9T5) tRNA pseudouridine synthase OS=Acromyrmex echinatior
GN=G5I_02243 PE=3 SV=1
Length = 398
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 40/203 (19%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
+K M +GYVG DY G+Q + TIE++L A+ KA I F + + + R+
Sbjct: 42 RKNHAMLLGYVGKDYYGMQRNPG---MKTIEEDLIIALLKADLITKEQFENTRAINFQRA 98
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S K+ PE++ K IN +LP+ IRVFGI K F+
Sbjct: 99 ARTDKGVSAIRQIVSLKL--PENSNK---------TVINQFLPDAIRVFGIKRVTKGFNS 147
Query: 179 RRECNLRKYSYLLPA--------DIIGIQSHFSEDE-------------IDFHIS----- 212
+ +C+ R Y Y++P+ ++ + EDE D+ +S
Sbjct: 148 KNQCDARTYRYVIPSYAFALEDQSLLKLGEEVDEDERIKQLSIIDGKPYTDYRLSPESLD 207
Query: 213 EFNSLLSAFEGEHPFHNYTVRSK 235
NS+L FEG H FHN+T + K
Sbjct: 208 RLNSILKLFEGSHNFHNFTSKVK 230
>H0ZCK2_TAEGU (tr|H0ZCK2) tRNA pseudouridine synthase (Fragment) OS=Taeniopygia
guttata GN=PUS1 PE=3 SV=1
Length = 330
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D+ + K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 2 DQNKKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMK 61
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+
Sbjct: 62 KMSFQRCARTDKGVSAAGQIVSLKVRLIDD----------ILEKINNHLPSHIRILGLKR 111
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFH-----ISEFNSLLSAFEGEHP 226
F+ + +C+ R YSY+LP + H ++E+ F + N LL+ ++G H
Sbjct: 112 VTGGFNSKNKCDARTYSYMLPTFAFAHKDHDVQEEL-FRLDRDTLERVNRLLACYKGTHN 170
Query: 227 FHNYT 231
FHN+T
Sbjct: 171 FHNFT 175
>K7GE06_PELSI (tr|K7GE06) tRNA pseudouridine synthase OS=Pelodiscus sinensis
GN=PUS1 PE=3 SV=1
Length = 429
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D+ + F K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 76 DQNKKFPKRKIVLLMAYSGKGYHGMQRNVGSLQFKTIEDDLVSALVRSGCIPENHGEDMK 135
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ W D + +IN YLP IR+ G+
Sbjct: 136 KMSFQRCARTDKGVSAAGQIVSLKI------WLIDN----VLEKINNYLPAHIRILGLKR 185
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHP 226
F + +C+ R Y Y+LP + H +DE + +S + N LL+ ++G H
Sbjct: 186 VTGGFSSKNKCDARTYFYMLPTFAFAHKDHGIQDET-YQLSKETLEKVNKLLACYKGTHN 244
Query: 227 FHNYT 231
FHN+T
Sbjct: 245 FHNFT 249
>C3YJ71_BRAFL (tr|C3YJ71) tRNA pseudouridine synthase OS=Branchiostoma floridae
GN=BRAFLDRAFT_93048 PE=3 SV=1
Length = 352
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + Y G Y G+Q + TIE++L A YKAG I + + K+ + R
Sbjct: 41 KRKVACLLAYSGVGYMGMQRNQG---FKTIEEDLLAAFYKAGAIPKDHMDCMQKMHFQRC 97
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S KM + EDA +IN L +IR+ GI + FD
Sbjct: 98 ARTDKGVSAAGQIVSLKMYMIEDA----------VQKINDCLAESIRLIGIKRTTNGFDS 147
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFHNYTVR 233
+ C+ R Y Y+LP E E DF ++ N +LSA++G H FHN+T
Sbjct: 148 KNACDARTYMYVLPT--YSFAPTKEETEQDFRATDDVMEKVNDVLSAYKGTHNFHNFTSG 205
Query: 234 SKYR 237
K++
Sbjct: 206 KKFK 209
>E0V909_PEDHC (tr|E0V909) tRNA pseudouridine synthase OS=Pediculus humanus subsp.
corporis GN=Phum_PHUM003070 PE=3 SV=1
Length = 410
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 24/186 (12%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + + Y G++Y G+Q D TIE EL A+ KA I +L + + R+
Sbjct: 73 KRNVALLMAYNGSNYHGMQKNLD---FKTIEYELLNALVKANLIPSEAIDNLPLIHFQRA 129
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++SFK I E+ E +IN++LP IRVF I K F+
Sbjct: 130 ARTDKGVSAAKQVVSFK--IAENFQVE---------KINMFLPEDIRVFSIKRVTKGFNC 178
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDE------ID-FHISEFNSLLSAFEGEHPFHNYT 231
+ +C R YSY LP + + H DE ID I + N +LS + G HPFHN+T
Sbjct: 179 KNQCTARTYSYTLPTFALAPEFH---DEYPKNYRIDKLTIQKTNEILSQYLGTHPFHNFT 235
Query: 232 VRSKYR 237
+ R
Sbjct: 236 SKKDGR 241
>D3BRD6_POLPA (tr|D3BRD6) tRNA pseudouridylate synthase OS=Polysphondylium
pallidum GN=pus1 PE=4 SV=1
Length = 531
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + VGY GT+YRG+Q TIE ELE AI+K GGI N K+ W R +RT
Sbjct: 132 VAICVGYSGTNYRGMQ---KNPGFPTIEDELEKAIFKVGGISPDNMYCHRKIDWIRCART 188
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV ++ M+S K+E E + IN LPN IRVF I F +
Sbjct: 189 DKGVSAIRNMVSCKLEYDPPTLDE------MKTAINAQLPNDIRVFAIKRVNNTFHAKNC 242
Query: 182 CNLRKYSYLLP--------ADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVR 233
+ R Y Y+ P A+ Q F E + NSLL F G +HNYT +
Sbjct: 243 VDRRSYIYITPTFAFEPIFANNKPAQYKFDE----LERTRLNSLLKLFVGTRKYHNYTSK 298
>G3BAF3_CANTC (tr|G3BAF3) Putative uncharacterized protein OS=Candida tenuis
(strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 /
NBRC 10315 / NRRL Y-1498 / VKM Y-70)
GN=CANTEDRAFT_115504 PE=4 SV=1
Length = 559
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V +GY GT Y G+QIQ + + TIE EL A AG I N DL K + R+
Sbjct: 68 KRKVACMIGYCGTGYNGMQIQNNPD-VKTIEGELFQAFINAGAISQENSNDLKKNGFMRA 126
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN LP IR++GI + + FD
Sbjct: 127 ARTDKGVHAAGNVISCKLII------EDED---ILQKINKALPEQIRIWGIERTNRSFDC 177
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 178 RKMCSSRVYEYLLPT 192
>L8ISU5_BOSMU (tr|L8ISU5) tRNA pseudouridine synthase OS=Bos grunniens mutus
GN=M91_11691 PE=3 SV=1
Length = 433
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 89 KRKIVLLMAYSGKGYHGMQRNVGSSKFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 149 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 198
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H S+DE + N LL+ ++G H FHN+T
Sbjct: 199 KNKCDARTYVYMLPTFAFAHKDHDSQDETYRLSAETLGRVNRLLACYKGTHNFHNFT 255
>E1BDL3_BOVIN (tr|E1BDL3) tRNA pseudouridine synthase OS=Bos taurus GN=PUS1 PE=3
SV=1
Length = 433
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 89 KRKIVLLMAYSGKGYHGMQRNVGSSKFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 149 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 198
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H S+DE + N LL+ ++G H FHN+T
Sbjct: 199 KNKCDARTYVYMLPTFAFAHKDHDSQDETYRLSAETLGRVNRLLACYKGTHNFHNFT 255
>G5AWT0_HETGA (tr|G5AWT0) tRNA pseudouridine synthase OS=Heterocephalus glaber
GN=GW7_03175 PE=3 SV=1
Length = 420
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ +AG I +S+ D+ K+ + R
Sbjct: 79 KRKIVLLMAYSGKGYHGMQRNSGSSKFKTIEDDLVSALVRAGCIPESHGEDMRKMSFQRC 138
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED L ++IN +LP+ IR+ G+ F+
Sbjct: 139 ARTDKGVSAAGQVVSLKVWLIED----------LLDKINSHLPSHIRILGLRRVTGGFNS 188
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + +DE + + N LL+ +G H FHN+T
Sbjct: 189 KNKCDARTYFYMLPTFAFAHKDRDVQDETYRLSAETLQQVNRLLACHKGTHNFHNFT 245
>A0E7K0_PARTE (tr|A0E7K0) tRNA pseudouridine synthase OS=Paramecium tetraurelia
GN=GSPATT00023995001 PE=3 SV=1
Length = 351
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ K+ V++ GY G +Y GLQIQ+ T+E +L A+ + I + N DL K W
Sbjct: 5 YFKQKVLLTFGYNGANYHGLQIQKGVE-FETVESKLFQALKDSNLIMEQNANDLSKSGWS 63
Query: 117 RSSRTDKGVHSLATMISFKM----EIPEDAWKEDRDGVV-------------LANRINIY 159
R +RTDKGVH+L I+ K+ E +D +++ + +V + N IN
Sbjct: 64 RGARTDKGVHALCNSIAVKLCINKEFFKDEIQQNEEEIVSKLRDKQKVDYSKVLNVINSN 123
Query: 160 LPNTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLS 219
LPN I+V I + FD R+ R Y Y+ P I +S+ + + + + ++L+
Sbjct: 124 LPNDIKVHSIKLVTQGFDVRKNARYRFYEYIAPVSI------YSDKKGEEILEKVSNLVK 177
Query: 220 AFEGEHPFHNYTVRSKY 236
F G H FHNY+ KY
Sbjct: 178 KFVGTHNFHNYSRGMKY 194
>F1NZ90_CHICK (tr|F1NZ90) tRNA pseudouridine synthase (Fragment) OS=Gallus gallus
GN=PUS1 PE=3 SV=2
Length = 403
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 97/177 (54%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 57 KRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVSALVRSGCIPENHGEDMKKMSFQRC 116
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 117 ARTDKGVSAAGQIVSLKVRLIDD----------ILEKINNHLPSHIRILGLKRVTGGFNS 166
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDF----HISEFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y+Y+LP + H ++E + + NSLL+ ++G H FHN+T
Sbjct: 167 KNKCDARTYAYMLPTFAFAHKDHDVQEEAHRLSRETLEKVNSLLARYKGTHNFHNFT 223
>H9GCL0_ANOCA (tr|H9GCL0) tRNA pseudouridine synthase (Fragment) OS=Anolis
carolinensis GN=LOC100562702 PE=3 SV=1
Length = 373
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 26/190 (13%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D + F K+ +V+ V Y G Y G+Q + TIE +L A+ ++G I +++ D+
Sbjct: 46 DGAKRFPKRKIVLLVAYSGKGYHGMQRNVGNSQFKTIEDDLVLALIQSGCIPENHGEDMK 105
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + ED + +IN +LP IR+ G+
Sbjct: 106 KMSFQRCARTDKGVSAAGQIVSLKVWLIED----------ILQKINNHLPPHIRILGLKR 155
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFH----------ISEFNSLLSAF 221
F+ + +C+ R YSY+LP F+ + DF ++ N LL+ +
Sbjct: 156 VTGGFNSKNKCDARTYSYMLPTFA------FAHKDCDFQDHTFHLNTETLATVNRLLAGY 209
Query: 222 EGEHPFHNYT 231
+G H FHN+T
Sbjct: 210 KGTHNFHNFT 219
>N9V0D5_ENTHI (tr|N9V0D5) tRNA pseudouridine synthase A, putative OS=Entamoeba
histolytica HM-1:IMSS-A GN=EHI7A_133020 PE=4 SV=1
Length = 401
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 43 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 100
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 101 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 150
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 151 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 210
Query: 236 YRK 238
K
Sbjct: 211 ETK 213
>M7W1N4_ENTHI (tr|M7W1N4) tRNA pseudouridine synthase A, putative OS=Entamoeba
histolytica HM-3:IMSS GN=KM1_220750 PE=4 SV=1
Length = 401
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 43 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 100
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 101 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 150
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 151 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 210
Query: 236 YRK 238
K
Sbjct: 211 ETK 213
>M3UHA6_ENTHI (tr|M3UHA6) tRNA pseudouridine synthase OS=Entamoeba histolytica
HM-1:IMSS-B GN=EHI8A_156700 PE=3 SV=1
Length = 401
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 43 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 100
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 101 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 150
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 151 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 210
Query: 236 YRK 238
K
Sbjct: 211 ETK 213
>M2RXM6_ENTHI (tr|M2RXM6) tRNA pseudouridine synthase OS=Entamoeba histolytica
KU27 GN=EHI5A_116590 PE=3 SV=1
Length = 401
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 43 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 100
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 101 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 150
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 151 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 210
Query: 236 YRK 238
K
Sbjct: 211 ETK 213
>C4LUW4_ENTHI (tr|C4LUW4) tRNA pseudouridine synthase OS=Entamoeba histolytica
GN=EHI_179010 PE=3 SV=1
Length = 401
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 43 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 100
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 101 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 150
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 151 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 210
Query: 236 YRK 238
K
Sbjct: 211 ETK 213
>D0P1S2_PHYIT (tr|D0P1S2) tRNA pseudouridine synthase OS=Phytophthora infestans
(strain T30-4) GN=PITG_20377 PE=3 SV=1
Length = 470
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 52/210 (24%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
V + G +Y G+Q+ + TIE ELE A+++AGGI +SN+G L K+ W R++RTDKGV
Sbjct: 77 VAFCGKNYCGMQMNEG---VKTIEAELERALFEAGGIAESNYGYLQKIGWSRAARTDKGV 133
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +++ K+ + +D +++ LP IRV ++ K F+ + C+ R
Sbjct: 134 HAAGQLLTAKLHVGDDI-------AGFMAKVDAALPEDIRVMHMVTVTKNFNAKMTCDQR 186
Query: 186 KYSYLLPADIIG--IQSHFSEDE-------------------------------IDFH-- 210
Y YL P I G ++S S++E ++ H
Sbjct: 187 TYEYLAPTFIFGKRMRSSASKNEEKQAEGTNQWPSNLRDSEEGFDSNVVIDNTTLEAHKA 246
Query: 211 -------ISEFNSLLSAFEGEHPFHNYTVR 233
+ + N+ L + G H FHN+T +
Sbjct: 247 FRLSDEILEQLNATLKQYVGTHNFHNFTSK 276
>M3WDX2_FELCA (tr|M3WDX2) tRNA pseudouridine synthase (Fragment) OS=Felis catus
GN=PUS1 PE=3 SV=1
Length = 367
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ +GY G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 29 KRKIVLLMGYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 88
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 89 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINGHLPPHIRILGLKRVTGGFNS 138
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + H +DE + +S N+LL+ ++G H FHN+T +
Sbjct: 139 KNKCDARTYLYMLPTFAFAHKDHDVQDE-SYRLSADTLRRVNALLACYKGTHNFHNFTSQ 197
Query: 234 SKYRK 238
R+
Sbjct: 198 KGPRE 202
>K2GZT2_ENTNP (tr|K2GZT2) tRNA pseudouridine synthase OS=Entamoeba nuttalli
(strain P19) GN=ENU1_126180 PE=3 SV=1
Length = 403
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 45 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 102
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 103 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 152
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ I FNS++S + H F NYT +K
Sbjct: 153 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDIDYFNSVISNYVKTHNFQNYTFNTK 212
Query: 236 YRK 238
K
Sbjct: 213 ETK 215
>G3BAF4_CANTC (tr|G3BAF4) Putative uncharacterized protein OS=Candida tenuis
(strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 /
NBRC 10315 / NRRL Y-1498 / VKM Y-70)
GN=CANTEDRAFT_115504 PE=4 SV=1
Length = 508
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V +GY GT Y G+QIQ + + TIE EL A AG I N DL K + R+
Sbjct: 68 KRKVACMIGYCGTGYNGMQIQNNPD-VKTIEGELFQAFINAGAISQENSNDLKKNGFMRA 126
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN LP IR++GI + + FD
Sbjct: 127 ARTDKGVHAAGNVISCKLII------EDED---ILQKINKALPEQIRIWGIERTNRSFDC 177
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 178 RKMCSSRVYEYLLPT 192
>A3LT93_PICST (tr|A3LT93) tRNA pseudouridine synthase (Fragment)
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PICST_58964 PE=3
SV=2
Length = 476
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+Q+Q D ++ TIE++L A AG + N D+ K + R+
Sbjct: 79 KRKVAVMIGYCGTGYNGMQLQNDP-KIPTIERDLYEAFAAAGAVSPENAMDIKKSGFMRA 137
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I D +LA +IN LP+ IR++GI K FD
Sbjct: 138 ARTDKGVHAAGNVISLKLII--------EDPEILA-KINEKLPDQIRIWGIQRVTKSFDC 188
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YLLP
Sbjct: 189 RKMCSSRVYEYLLPT 203
>K9ITD6_DESRO (tr|K9ITD6) tRNA pseudouridine synthase (Fragment) OS=Desmodus
rotundus PE=2 SV=1
Length = 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +VM + Y G Y G+Q + TIE +L +A+ ++G I +S+ D+ K+ + R
Sbjct: 58 KRKIVMLLAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPESHGEDMRKMSFQRC 117
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 118 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 167
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ C+ R Y Y+LP + ++DE + +S + N LL+ ++G H FHN+T +
Sbjct: 168 KNRCDARTYVYMLPTFAFAHKDRDAQDET-YRLSAETLQQVNRLLACYKGTHNFHNFTSQ 226
Query: 234 SKYRK 238
R+
Sbjct: 227 KGPRE 231
>G3HCC4_CRIGR (tr|G3HCC4) tRNA pseudouridine synthase OS=Cricetulus griseus
GN=I79_008131 PE=3 SV=1
Length = 423
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ +AG I +++ D+ K+ + R
Sbjct: 79 KRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAGCIPENHGTDMRKMSFQRC 138
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + ++IN +LP+ IR+ G+ F+
Sbjct: 139 ARTDKGVSAAGQVVSLKVWLIDD----------ILDKINSHLPSNIRILGLKRVTGGFNS 188
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + +DE + +S + N LL+ ++G H FHN+T +
Sbjct: 189 KNKCDARTYCYMLPTFAFAHKDRDVQDE-SYRLSPETLEQVNRLLACYKGTHNFHNFTSQ 247
Query: 234 SKYRK 238
R+
Sbjct: 248 KGPRE 252
>H3B8J2_LATCH (tr|H3B8J2) tRNA pseudouridine synthase (Fragment) OS=Latimeria
chalumnae PE=3 SV=1
Length = 330
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + + Y G Y G+Q L TIE +L A+ KAG I ++ D+ ++ + R
Sbjct: 11 KRKFALLLAYNGNGYYGMQRNPGVRDLHTIEDDLVLALVKAGCIPEAFADDMKELSFQRC 70
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED L + +N LP IRV G + F
Sbjct: 71 ARTDKGVSAAGQLVSLKLHLTED----------LVDVLNQNLPPQIRVLGCKRVTRGFSS 120
Query: 179 RRECNLRKYSYLLPADIIGIQ------SHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
+ C+ R YSY+LP Q HF FH N LLS + G H FHN+T
Sbjct: 121 KSNCDARTYSYMLPTFTFATQDGERQDGHFCLHRDTFH--RVNHLLSCYRGTHNFHNFT 177
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 325 SHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLS 384
S R + CG+ G +Y I+I G SFM HQIRKMV AVAV + P IL+ S
Sbjct: 186 SAVRYVMSACCGEPFFYGGLEYAIIEIKGQSFMRHQIRKMVALAVAVAKGWAPEPILAES 245
Query: 385 LIKFTRIVLPLAPPEVLILRGNTFSMRSS-AGKFIRPEMVSLVESEPILNEVEE--FYTS 441
L ++ LP P L+L F ++ G+ + +S E EP++ E +E Y S
Sbjct: 246 LSS-EKVHLPRVPGLGLVLERVHFDRHNARYGQNGIHQRISWEEVEPLMMEFKERQIYPS 304
Query: 442 VMLPELSKFLDSSKSPWVEWVERLDKYS 469
V+ EL + +W+E+L ++S
Sbjct: 305 VVRVEL------EEKSMAKWLEKLARHS 326
>B0EEF0_ENTDS (tr|B0EEF0) tRNA pseudouridine synthase OS=Entamoeba dispar (strain
ATCC PRA-260 / SAW760) GN=EDI_135170 PE=3 SV=1
Length = 403
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V + YVG Y GL + + TIE E+E A+YKA I + N DL KV W R +RT
Sbjct: 45 VAVIFSYVGRGYFGLMYLNNNPK--TIEGEIENAMYKAKCISEDNKHDLKKVGWSRCART 102
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DKGV + +IS KM + DG + RIN +LP TIR+ ++ F+ +
Sbjct: 103 DKGVSAANNLISLKMGL---------DGNYIE-RINSFLPETIRIQDVVKVSHSFNAKTR 152
Query: 182 CNLRKYSYLLPADIIG-IQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSK 235
+ R Y Y+ P+ I I S E ++++ + FNS++S + H F NYT +K
Sbjct: 153 VDSRTYEYIFPSYAIQKIDSEHPEINVEYNPQQEDVDYFNSVISNYVKTHNFQNYTFNTK 212
Query: 236 YRK 238
K
Sbjct: 213 ETK 215
>B3S1D9_TRIAD (tr|B3S1D9) tRNA pseudouridine synthase OS=Trichoplax adhaerens
GN=TRIADDRAFT_57795 PE=3 SV=1
Length = 385
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 27/186 (14%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +G+ G Y G+Q R TIE++L A++KAG I ++ K+ + R+
Sbjct: 45 KRKVALLLGFCGAGYFGMQRNRG---TKTIEEDLINALFKAGAIPEAAKEHEQKMAFQRA 101
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
SRTDKGVH+ A ++SFKM + +D V+A +IN +LP IRVFG K F+
Sbjct: 102 SRTDKGVHAAAQVVSFKMFVVDD---------VIA-KINSHLPREIRVFGHFRVTKGFNS 151
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDE--------IDFHISEFNSLLSAFEGEHPFHNY 230
+ C+ R Y Y++P F+ E I+ I +L+ + G FHN+
Sbjct: 152 KTACDARTYKYVMPT------YAFANKEKKNMYILVIEATIKHVRDILAMYVGTRNFHNF 205
Query: 231 TVRSKY 236
T + Y
Sbjct: 206 TSKKAY 211
>J9IRD9_9SPIT (tr|J9IRD9) tRNA pseudouridine synthase OS=Oxytricha trifallax
GN=OXYTRI_00374 PE=3 SV=1
Length = 497
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 7/132 (5%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V M VGY G+++ G Q + + ++E+E+E A+Y+ G I + N+GDL K+ W R++RT
Sbjct: 64 VAMIVGYNGSNFCGSQKNPN---IRSVEEEIEKALYRLGRISEYNYGDLKKIGWNRATRT 120
Query: 122 DKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRE 181
DK VH++ SFK+ I +D ED D V+ N+ LP I +F I+ S RF+ +
Sbjct: 121 DKRVHAIQNCFSFKIHISKDE-NEDEDFRVVLNK---ELPEDITIFAIIRSSNRFNSKLN 176
Query: 182 CNLRKYSYLLPA 193
+ R+YSY LP
Sbjct: 177 ADDREYSYYLPT 188
>H2Q778_PANTR (tr|H2Q778) tRNA pseudouridine synthase OS=Pan troglodytes GN=PUS1
PE=2 SV=1
Length = 427
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
++ E K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 76 ERREKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMR 135
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + ED + +IN +LP+ IR+ G+
Sbjct: 136 KMSFQRCARTDKGVSAAGQVVSLKVWLIED----------ILEKINSHLPSHIRILGLKR 185
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHP 226
F+ + C+ R Y YLLP + +DE + +S + N LL+ ++G H
Sbjct: 186 VTGGFNSKNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHN 244
Query: 227 FHNYT 231
FHN+T
Sbjct: 245 FHNFT 249
>K7AZX7_PANTR (tr|K7AZX7) tRNA pseudouridine synthase OS=Pan troglodytes GN=PUS1
PE=2 SV=1
Length = 438
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
++ E K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 87 ERREKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMR 146
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + ED + +IN +LP+ IR+ G+
Sbjct: 147 KMSFQRCARTDKGVSAAGQVVSLKVWLIED----------ILEKINSHLPSHIRILGLKR 196
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHP 226
F+ + C+ R Y YLLP + +DE + +S + N LL+ ++G H
Sbjct: 197 VTGGFNSKNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHN 255
Query: 227 FHNYT 231
FHN+T
Sbjct: 256 FHNFT 260
>I3EN05_NEMP1 (tr|I3EN05) tRNA pseudouridine synthase OS=Nematocida parisii
(strain ERTm1 / ATCC PRA-289) GN=NEPG_01605 PE=3 SV=1
Length = 325
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY G Y+G QI ++E TIEK + I+ I + N D KV RS
Sbjct: 3 KKRVALIIGYNGIGYKGSQINKEE---KTIEKTVCDEIHALHYISERNAEDYSKVALQRS 59
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLP-NTIRVFGILPSKKRFD 177
SRTDKGVH+ ++S ++EI E +D L N++ LP + I + ++ + K FD
Sbjct: 60 SRTDKGVHAAMLVLSLRIEISEGRSCKD-----LENKLKESLPAHGIVLHRLVETTKNFD 114
Query: 178 PRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSK 235
+ C R Y Y +P +S SED I F L EG H FHN+T+ ++
Sbjct: 115 AKHRCESRVYEYFVPQSAYVTESDTSED-ISRKTKIFTETLQKMEGTHNFHNFTILTQ 171
>I3EIZ0_NEMP3 (tr|I3EIZ0) tRNA pseudouridine synthase OS=Nematocida parisii
(strain ERTm3) GN=NEQG_01006 PE=3 SV=1
Length = 325
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY G Y+G QI ++E TIEK + I+ I + N D KV RS
Sbjct: 3 KKRVALIIGYNGIGYKGSQINKEE---KTIEKTVCDEIHALHYISERNAEDYSKVALQRS 59
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLP-NTIRVFGILPSKKRFD 177
SRTDKGVH+ ++S ++EI E +D L N++ LP + I + ++ + K FD
Sbjct: 60 SRTDKGVHAAMLVLSLRIEISEGRSCKD-----LENKLKESLPAHGIVLHRLVETTKNFD 114
Query: 178 PRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSK 235
+ C R Y Y +P +S SED I F L EG H FHN+T+ ++
Sbjct: 115 AKHRCESRVYEYFVPQSAYVTESDTSED-ISRKTKIFTETLQKMEGTHNFHNFTILTQ 171
>H3BGZ8_LATCH (tr|H3BGZ8) tRNA pseudouridine synthase OS=Latimeria chalumnae PE=3
SV=1
Length = 402
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ VV + Y G Y G+Q + TIE +L A+ ++G I ++ D+ K+ + R
Sbjct: 55 KRKVVFLLAYSGKGYHGMQRNTGSSQFRTIEDDLVQALVESGCIPGNHGEDMKKMSFQRC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + ED + ++IN +LP IR+ G+ F+
Sbjct: 115 ARTDKGVSAAGQIVSLKVWLIED----------IVDKINEHLPPHIRILGMKRVTGGFNS 164
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE ++ +S + N LL+ F+G H FHN+T
Sbjct: 165 KNKCDARTYFYMLPTFAFAHKDHDLQDE-EYRLSKTTLEKVNRLLACFKGTHNFHNFT 221
>A9TRH5_PHYPA (tr|A9TRH5) tRNA pseudouridine synthase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_197512 PE=3 SV=1
Length = 499
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + + Y G Y+G+Q R+ + TIE ELE A+++A I + NFGD+ KV W R+
Sbjct: 56 KRKVALILAYCGAAYQGMQ--RNPGAI-TIEGELEQALFRADAIAECNFGDMRKVDWMRA 112
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S ++ I D G+V R+N +LP IRVFG F+
Sbjct: 113 ARTDKGVSAIGQIVSARLVI-------DPPGLV--ERVNQHLPKDIRVFGYTRVTSNFNA 163
Query: 179 RRECNLRKYSYLLPADIIGIQSH 201
++ C+ R+Y YL+P +H
Sbjct: 164 KQMCDKRRYEYLVPVFAFNPHAH 186
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 328 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 387
R I + GK+ + G +V + G SFMLHQIRKM+GTA+A+ R +P I+ +L
Sbjct: 350 RYIISFTAGKVIEVQGMQFVPCTVVGQSFMLHQIRKMIGTAIAIMRGCVPDSIIDFALQS 409
Query: 388 FTRIVLPLAPPEVLIL 403
+ P+AP L L
Sbjct: 410 KNDVNTPMAPELGLFL 425
>H2B1T9_KAZAF (tr|H2B1T9) tRNA pseudouridine synthase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0K02340 PE=3 SV=1
Length = 370
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 34/195 (17%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K V + +GY G +Y G+Q D + TIE L A+ +AG I +N + +K K+ R+
Sbjct: 35 KHKVALMIGYCGDNYHGMQYNAD---VQTIEGALFRALCQAGAISKANSTNFNKNKFMRT 91
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH++ +IS KM I + KE R+N +LP I ++ I K+F+
Sbjct: 92 TRTDKGVHAVCNLISLKMIIEDPDIKE---------RVNSFLPADITLWNIQRVNKKFNC 142
Query: 179 RRECNLRKYSYLLPADIIG-------------------IQSHFSEDEIDF---HISEFNS 216
R C R Y Y LP ++ I +S + F
Sbjct: 143 RTACESRLYEYALPTFVLQNPPSQSILSRMLQLFGHSPIVHQYSMQDSTLSSKKFCHFEK 202
Query: 217 LLSAFEGEHPFHNYT 231
LS + G H FHN+T
Sbjct: 203 CLSMYTGTHNFHNFT 217
>Q3TT85_MOUSE (tr|Q3TT85) tRNA pseudouridine synthase OS=Mus musculus GN=Pus1
PE=2 SV=1
Length = 393
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ +AG I +++ D+ K+ + R
Sbjct: 49 KRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAGCIPENHGTDMRKMSFQRC 108
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + ++IN +LP+ IR+ G+ F+
Sbjct: 109 ARTDKGVSAAGQVVSLKVWLIDD----------ILDKINSHLPSHIRILGLKRVTGGFNS 158
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + +DE + +S + N LL+ ++G H FHN+T +
Sbjct: 159 KNKCDARTYCYMLPTFAFAHKDRDVQDE-SYRLSAETLQQVNRLLACYKGTHNFHNFTSQ 217
Query: 234 SKYRK 238
R+
Sbjct: 218 KGPRE 222
>F1RFR2_PIG (tr|F1RFR2) tRNA pseudouridine synthase OS=Sus scrofa GN=PUS1 PE=3
SV=2
Length = 433
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 89 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 149 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 198
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYTVRS 234
+ +C+ R Y Y+LP + H +DE + N LL+ ++G H FHN+T +
Sbjct: 199 KNKCDARTYFYMLPTFAFAHKDHDVQDETYRLSTETLQRVNRLLACYKGTHNFHNFTSQK 258
Query: 235 KYRK 238
R+
Sbjct: 259 GPRE 262
>D6WB40_TRICA (tr|D6WB40) tRNA pseudouridine synthase OS=Tribolium castaneum
GN=TcasGA2_TC004829 PE=3 SV=1
Length = 390
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 22/187 (11%)
Query: 55 EPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVK 114
E ++ + +GY GT+Y G+Q + TIE+E A+YK I + NF + ++
Sbjct: 52 EKIKRRKFAVLLGYSGTNYYGMQRNPN---TPTIEEEFFKALYKNNYISEENFTQVQTMQ 108
Query: 115 WGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKK 174
+ R++RTDKGV + ++S K+ +ED D ++IN LP IRVFGI K
Sbjct: 109 FQRAARTDKGVSAARQVVSLKL-------REDID----ISKINEQLPEVIRVFGIRRVTK 157
Query: 175 RFDPRRECNLRKYSYLLPA------DIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFH 228
F+ + +C+ R Y+YLLP D + +Q F D D ++ N LL + G FH
Sbjct: 158 GFNSKVQCDSRSYTYLLPTVSFTPHDQLMVQKGFRLD--DSTLNRINDLLQKYLGTKNFH 215
Query: 229 NYTVRSK 235
N+T + +
Sbjct: 216 NFTSKKQ 222
>F7EPT1_CALJA (tr|F7EPT1) tRNA pseudouridine synthase OS=Callithrix jacchus
GN=PUS1 PE=3 SV=1
Length = 428
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ VV+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 84 KRKVVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 143
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + DG++ +IN +LP+ IR+ G+ F+
Sbjct: 144 ARTDKGVSAAGQVVSLKVWLI--------DGIL--EKINRHLPSHIRILGLKRVTGGFNS 193
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y YLLP + +DE + +S + N LL+ +EG H FHN+T
Sbjct: 194 KNKCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYEGTHNFHNFT 250
>B1WBN5_RAT (tr|B1WBN5) tRNA pseudouridine synthase OS=Rattus norvegicus
GN=Pus1 PE=2 SV=1
Length = 423
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ +AG I +++ D+ K+ + R
Sbjct: 79 KRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAGCIPENHGTDMRKMSFQRC 138
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + ++IN +LP+ IR+ G+ F+
Sbjct: 139 ARTDKGVSAAGQVVSLKVWLIDD----------ILDKINSHLPSHIRILGLKRVTGGFNS 188
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + +DE + +S + N LL ++G H FHN+T +
Sbjct: 189 KNKCDARTYCYMLPTFAFAHKDRDVQDE-SYRLSAETLQQVNRLLGCYKGTHNFHNFTSQ 247
Query: 234 SKYRK 238
R+
Sbjct: 248 KGPRE 252
>E3LJ74_CAERE (tr|E3LJ74) tRNA pseudouridine synthase OS=Caenorhabditis remanei
GN=Cre-pus-1 PE=3 SV=1
Length = 438
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGI----RDSNFGDLDKVKWGRS 118
M +GY G Y G+Q+Q+D L TIE +L A+ KAG I RD F + R+
Sbjct: 36 AMLLGYQGKKYYGMQLQKD---LPTIESKLLEAMEKAGWITAAQRDKPFDFF----FQRA 88
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+ V + M M++P D K DG A +N LP+ IRVFG+ + F P
Sbjct: 89 ARTDRAVSAARQMCG--MQLPRDDDKYQTDG---AGVLNNLLPDDIRVFGMRRTINFFHP 143
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDF---HISEFNSLLSAFEGEHPFHNYTVRSK 235
+++C+ R YSY P+ + + + ++E N +LS ++G H F NYT +
Sbjct: 144 QKQCDYRTYSYTCPSFVFAKPTELTNSAFRLPKETLAEVNDILSIYKGTHNFFNYTAKRA 203
Query: 236 Y 236
Y
Sbjct: 204 Y 204
>C5ISB6_SHEEP (tr|C5ISB6) tRNA pseudouridine synthase OS=Ovis aries GN=PUS1 PE=2
SV=1
Length = 400
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 56 KRKIVLLMAYSGKGYHGMQRNVGSSKFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 115
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 116 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 165
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE + N LL+ ++G H FHN+T
Sbjct: 166 KNKCDARTYFYMLPTFAFAHKDHDLQDETYRLSAETLGRVNRLLACYKGTHNFHNFT 222
>H9JGP2_BOMMO (tr|H9JGP2) tRNA pseudouridine synthase OS=Bombyx mori PE=3 SV=1
Length = 429
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 54 WEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
+E +K + M +GY G +Y G+Q + TIE+EL A+ A I +F +
Sbjct: 47 YERIKRKKMAMLLGYSGVEYYGMQRNPG---VQTIEEELLKALLDAKYITQEDFENAQNA 103
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
++ RSSRTDKGV + ++S K+ + V IN LP TI+VF +
Sbjct: 104 QFQRSSRTDKGVSAAEQVVSLKLPLE-----------VNVEEINKRLPETIKVFAVKRVT 152
Query: 174 KRFDPRRECNLRKYSYLLPADII--GIQSHFSEDEIDF---HISEFNSLLSAFEGEHPFH 228
RF+ + +CN R YSY LP + + +H I + NS+L ++G +H
Sbjct: 153 NRFNSKSKCNARSYSYTLPTYVFEPSLVTHEKRKAYRIPAEKIEKLNSILGVYKGTKSYH 212
Query: 229 NYTVRSKYRKKHHARKSPGNGIMS 252
N+T KKHH S +MS
Sbjct: 213 NFT-----EKKHHQDPSSSRYMMS 231
>F6QV98_XENTR (tr|F6QV98) tRNA pseudouridine synthase OS=Xenopus tropicalis
GN=pus1 PE=3 SV=1
Length = 399
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ VV+ + Y G Y G+Q + TIE EL A+ +G I D++ D+ K+ + R
Sbjct: 54 KRKVVLLMAYSGKGYHGMQRNVGSSQFKTIEDELVQALVLSGCIPDNHAEDMKKMSFQRC 113
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN LP+ IR+ G+ RF+
Sbjct: 114 ARTDKGVSAAGQVVSLKI------WLIDN----VVEKINENLPSHIRILGLKRVTGRFNS 163
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFHNYT 231
+ C+ R YSY LP + ++DE +F +S+ N LL+ ++G FHN+T
Sbjct: 164 KNSCDARTYSYTLPTFAFSHKDKEAQDE-NFRLSQETLNRVNELLALYKGTRNFHNFT 220
>H0WZ29_OTOGA (tr|H0WZ29) tRNA pseudouridine synthase (Fragment) OS=Otolemur
garnettii GN=PUS1 PE=3 SV=1
Length = 384
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ V Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 40 KRKIVLLVAYAGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 99
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 100 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 149
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPFHNYTVRS 234
+ +C+ R Y Y+LP + +DE + N LL+ ++G H FHN+T +
Sbjct: 150 KNKCDARTYCYMLPTFAFAHKDRDVQDETYRLSPETLQRVNRLLACYKGTHNFHNFTSQK 209
Query: 235 KYRK 238
R+
Sbjct: 210 GPRE 213
>F6ZG84_ORNAN (tr|F6ZG84) tRNA pseudouridine synthase OS=Ornithorhynchus anatinus
GN=PUS1 PE=3 SV=2
Length = 436
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 89 KRKIVLLMAYSGKGYYGMQRHVGSSQFKTIEDDLVSALVQSGCIPENHGDDMKKMSFQRC 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN +LP+ IR+ G+ F+
Sbjct: 149 ARTDKGVSAAGQIVSLKV------WLIDN----ILEKINSHLPSQIRILGLKRVTGGFNS 198
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C R Y Y+LP + H +DE + +S N LL+ ++G H FHN+T
Sbjct: 199 KNNCTARTYFYMLPTLAFAHKDHDPQDET-YRLSPEVLERVNRLLACYKGTHHFHNFT 255
>E2B4B1_HARSA (tr|E2B4B1) tRNA pseudouridine synthase OS=Harpegnathos saltator
GN=EAI_06060 PE=3 SV=1
Length = 364
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 40/196 (20%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY+G +Y G+Q + TIE++L A+ KA I F +L + + R++RTDKGV
Sbjct: 2 LGYLGKNYYGMQ---RNPGMKTIEEDLVNALLKANLITTEQFENLRTINFQRAARTDKGV 58
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
++ ++S K+ PE+ K IN +LP+ IRVFGI K F+ + +C+ R
Sbjct: 59 SAVRQIVSLKL--PENPDK---------TIINQFLPDVIRVFGIKRVTKGFNSKNQCDAR 107
Query: 186 KYSYLLPA---------------------DIIGIQSHFSEDEIDFHIS-----EFNSLLS 219
Y Y++P+ I I + E ID+ +S NS+L
Sbjct: 108 TYRYIIPSFTFAMEDQSLLKMGEEVDINERIKQISTIDGEPYIDYRLSIESLNRLNSILK 167
Query: 220 AFEGEHPFHNYTVRSK 235
FEG H FHN+T ++K
Sbjct: 168 LFEGTHNFHNFTSKTK 183
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G ++V +++ G SFMLHQIRKMV T +AV RN+IP + ++ + K ++ +P+AP L
Sbjct: 206 GIEFVVLEVKGQSFMLHQIRKMVATVIAVARNIIPEETINEAF-KTVKMEIPIAPSLGLC 264
Query: 403 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 462
L + + A ++ M ++ + EVE+F +L + + S++ + W+
Sbjct: 265 LCHVHYD--NYAKRYGTDGMHETLDWKECEEEVEKFQKEYILQYIID-TEISENTALNWI 321
Query: 463 ERLDKYSSFADAE 475
L +Y SF++ E
Sbjct: 322 ATLPEY-SFSNIE 333
>E2QW32_CANFA (tr|E2QW32) tRNA pseudouridine synthase OS=Canis familiaris GN=PUS1
PE=3 SV=2
Length = 438
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 93 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMRKMSFQRC 152
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 153 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 202
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE + +S N LL+ ++G H FHN+T
Sbjct: 203 KNKCDARTYFYMLPTFAFAHKDHDVQDE-SYRLSAETLQRVNGLLACYKGTHNFHNFT 259
>H9Z2E9_MACMU (tr|H9Z2E9) tRNA pseudouridine synthase OS=Macaca mulatta GN=PUS1
PE=2 SV=1
Length = 427
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 83 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 142
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 143 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 192
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 193 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 249
>H2VS73_CAEJA (tr|H2VS73) tRNA pseudouridine synthase OS=Caenorhabditis japonica
GN=WBGene00123973 PE=3 SV=2
Length = 416
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTD 122
M +GY G Y G+Q+Q+D L TIE L A+ KAG I + + R++RTD
Sbjct: 37 AMLLGYQGKKYYGMQLQKD---LPTIESNLLEAMEKAGWITAAQKAKPFDFFFQRAARTD 93
Query: 123 KGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRREC 182
K V + M M++P D K +G + N I LP IRVFG+ + F P++ C
Sbjct: 94 KAVSAARQMCG--MQLPRDDAKYQAEGAGILNAI---LPEDIRVFGMRRTTNMFHPQKHC 148
Query: 183 NLRKYSYLLPADIIGIQSHFSEDEIDFH---ISEFNSLLSAFEGEHPFHNYTVRSKY 236
+ R YSY P+ + + + ++E N +LS ++G H F NYT + +
Sbjct: 149 DYRTYSYTCPSFVFAKPTELTNSSFRISPETLAEVNDILSIYKGTHNFFNYTAKRAF 205
>E2A5T0_CAMFO (tr|E2A5T0) tRNA pseudouridine synthase OS=Camponotus floridanus
GN=EAG_13505 PE=3 SV=1
Length = 330
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 40/203 (19%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
+K + +GY+G DY G+Q + TIE++L TA+ KA I +F ++ + + R+
Sbjct: 45 RKNHAILLGYLGKDYYGMQ---RNPGMKTIEEDLVTALLKADLITTEHFKNIRSISFQRA 101
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S K+ PE K D+ IN +LP+ I++FGI K F+
Sbjct: 102 ARTDKGVSAIRQIVSLKL--PE---KPDK------TVINKFLPDVIKIFGIKRVTKGFNS 150
Query: 179 RRECNLRKYSYLLPA--------DIIGIQSHFSEDE-------------IDFHIS----- 212
+ +C+ R Y Y++P ++ I +E+E +D+ +S
Sbjct: 151 KNQCDARTYRYIIPTFAFAPEDLTLLKIGEEINEEERIKQLSTIDGKSYVDYRLSPESLN 210
Query: 213 EFNSLLSAFEGEHPFHNYTVRSK 235
NS+L EG H FHN+T + K
Sbjct: 211 RLNSILKLMEGTHNFHNFTSKVK 233
>M3XT90_MUSPF (tr|M3XT90) tRNA pseudouridine synthase OS=Mustela putorius furo
GN=PUS1 PE=3 SV=1
Length = 394
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 56 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 115
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 116 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 165
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + H +DE + +S N LL+ ++G H FHN+T +
Sbjct: 166 KNKCDARTYFYMLPTFAFAHKDHDVQDE-SYRLSTETLLRVNRLLACYKGTHNFHNFTSQ 224
Query: 234 SKYRK 238
R+
Sbjct: 225 KGPRE 229
>A8WJJ2_CAEBR (tr|A8WJJ2) tRNA pseudouridine synthase OS=Caenorhabditis briggsae
GN=pus-1 PE=3 SV=1
Length = 437
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTD 122
M +GY G Y G+Q+Q+D L TIE +L A+ KAG I + + R++RTD
Sbjct: 36 AMLLGYQGKKYYGMQLQKD---LPTIESKLLEAMEKAGWITAAQREKPFDFFFQRAARTD 92
Query: 123 KGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRREC 182
+ V + M M++P D K DG + N + LPN IRVFG+ + F P+++C
Sbjct: 93 RAVSAARQMCG--MQLPRDDEKYKVDGPGILNNL---LPNDIRVFGMKRTINFFHPQKQC 147
Query: 183 NLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVRSKY 236
+ R YSY P + + + F IS E N +LS ++G H F NYT + Y
Sbjct: 148 DYRTYSYTCPTFVFAKPTELT--NAAFRISKETLAEVNDILSIYKGTHNFFNYTAKRAY 204
>F6SK59_MONDO (tr|F6SK59) tRNA pseudouridine synthase OS=Monodelphis domestica
GN=PUS1 PE=3 SV=2
Length = 446
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L A+ ++G I +++ D+ K+ + R
Sbjct: 99 KRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVFALVQSGCIPENHGEDMRKMAFQRC 158
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN +LP+ IR+ G+ F+
Sbjct: 159 ARTDKGVSAAGQIVSLKV------WLIDN----ILEKINSHLPSHIRILGLKRVTGSFNS 208
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE----FNSLLSAFEGEHPFHNYT 231
+ C+ R Y Y+LP + H +DE SE N LL++++G H FHN+T
Sbjct: 209 KNRCDARTYFYMLPTFAFAHKDHDVQDETYRLSSETLEKVNQLLASYKGTHSFHNFT 265
>H0UV99_CAVPO (tr|H0UV99) tRNA pseudouridine synthase (Fragment) OS=Cavia
porcellus GN=Pus1 PE=3 SV=1
Length = 403
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ +AG I +++ D+ K+ + R
Sbjct: 57 KRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVSALVRAGCIPENHGEDMRKMSFQRC 116
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D L ++IN +LP+ IRV G+ F+
Sbjct: 117 ARTDKGVSAAGQVVSLKV------WLIDG----LLDKINSHLPSHIRVLGLKRVTGGFNS 166
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ C+ R Y Y+LP + +DE + +S + N LL+ ++G H FHN+T +
Sbjct: 167 KNRCDARTYFYMLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFTSQ 225
Query: 234 SKYRK 238
R+
Sbjct: 226 KGPRE 230
>J9NVH5_CANFA (tr|J9NVH5) tRNA pseudouridine synthase OS=Canis familiaris GN=PUS1
PE=3 SV=1
Length = 398
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 60 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMRKMSFQRC 119
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 120 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 169
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE + +S N LL+ ++G H FHN+T
Sbjct: 170 KNKCDARTYFYMLPTFAFAHKDHDVQDE-SYRLSAETLQRVNGLLACYKGTHNFHNFT 226
>G7N6D0_MACMU (tr|G7N6D0) tRNA pseudouridine synthase (Fragment) OS=Macaca
mulatta GN=EGK_04370 PE=3 SV=1
Length = 379
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 35 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 94
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 95 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 144
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 145 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 201
>F7G9B1_MACMU (tr|F7G9B1) tRNA pseudouridine synthase OS=Macaca mulatta
GN=LOC719360 PE=2 SV=1
Length = 399
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 55 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 115 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 164
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 165 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 221
>G9KJH1_MUSPF (tr|G9KJH1) tRNA pseudouridine synthase (Fragment) OS=Mustela
putorius furo PE=2 SV=1
Length = 353
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 24 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 83
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 84 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 133
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + H +DE + +S N LL+ ++G H FHN+T +
Sbjct: 134 KNKCDARTYFYMLPTFAFAHKDHDVQDE-SYRLSTETLLRVNRLLACYKGTHNFHNFTSQ 192
Query: 234 SKYRK 238
R+
Sbjct: 193 KGPRE 197
>G3WJ74_SARHA (tr|G3WJ74) tRNA pseudouridine synthase OS=Sarcophilus harrisii
GN=PUS1 PE=3 SV=1
Length = 445
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 100 KRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVSALVQSGCIPENHGEDMKKMSFQRC 159
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN +LP+ IR+ G+ F+
Sbjct: 160 ARTDKGVSAAGQIVSLKV------WLIDN----ILEKINSHLPSHIRILGLKRVTGSFNS 209
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y Y+LP + H +DE + +S + N LL+ ++G H FHN+T
Sbjct: 210 KNRCDARTYFYMLPTFAFAHKDHDIQDE-RYRLSPETLEKVNQLLAGYKGTHNFHNFT 266
>K8F2K7_9CHLO (tr|K8F2K7) Uncharacterized protein OS=Bathycoccus prasinos
GN=Bathy09g01390 PE=3 SV=1
Length = 620
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK + + GY G Y+G+Q TIE +LE+AI KAGGI +SN GD +KV W R+
Sbjct: 105 KKKIALFFGYNGDGYQGMQRNPG---AKTIEDDLESAIVKAGGIAESNSGDFNKVHWNRA 161
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLP-NTIRVFGILPSKKRFD 177
+RTDKGV ++ ++SFK +D E + IN +LP I FG F
Sbjct: 162 ARTDKGVSAVGQVVSFKCMNADDGNTE-----TIVRLINEHLPRGKIVAFGATRVTGGFS 216
Query: 178 PRRECNLRKYSYLLP 192
+ +C+ RKY Y++P
Sbjct: 217 AKNQCDRRKYEYVVP 231
>G7PJH1_MACFA (tr|G7PJH1) tRNA pseudouridine synthase (Fragment) OS=Macaca
fascicularis GN=EGM_03911 PE=3 SV=1
Length = 363
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 19 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 78
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 79 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 128
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 129 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 185
>F7G6D4_MACMU (tr|F7G6D4) tRNA pseudouridine synthase (Fragment) OS=Macaca
mulatta GN=LOC719360 PE=2 SV=1
Length = 402
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 58 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 117
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 118 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 167
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 168 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 224
>G8JLB3_HUMAN (tr|G8JLB3) tRNA pseudouridine synthase (Fragment) OS=Homo sapiens
GN=PUS1 PE=2 SV=1
Length = 384
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 55 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 115 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 164
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 165 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 221
>G3R1B2_GORGO (tr|G3R1B2) tRNA pseudouridine synthase OS=Gorilla gorilla gorilla
GN=PUS1 PE=3 SV=1
Length = 427
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
++ E K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 76 ERREKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMR 135
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+
Sbjct: 136 KMSFQRCARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKR 185
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHP 226
F+ + C+ R Y YLLP + +DE + +S N LL+ ++G H
Sbjct: 186 VTGGFNSKNRCDARTYCYLLPTFAFAHKDRDVQDE-SYRLSAETLQRVNRLLACYKGTHN 244
Query: 227 FHNYT 231
FHN+T
Sbjct: 245 FHNFT 249
>E5KMT5_HUMAN (tr|E5KMT5) tRNA pseudouridine synthase OS=Homo sapiens PE=2 SV=1
Length = 427
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 83 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 142
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 143 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 192
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 193 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 249
>H9F4C3_MACMU (tr|H9F4C3) tRNA pseudouridine synthase (Fragment) OS=Macaca
mulatta GN=PUS1 PE=2 SV=1
Length = 374
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 30 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 89
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 90 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 139
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 140 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 196
>E5KMT6_HUMAN (tr|E5KMT6) tRNA pseudouridine synthase OS=Homo sapiens PE=2 SV=1
Length = 399
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 55 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 115 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 164
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 165 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 221
>G3WJ75_SARHA (tr|G3WJ75) tRNA pseudouridine synthase OS=Sarcophilus harrisii
GN=PUS1 PE=3 SV=1
Length = 410
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 65 KRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVSALVQSGCIPENHGEDMKKMSFQRC 124
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN +LP+ IR+ G+ F+
Sbjct: 125 ARTDKGVSAAGQIVSLKV------WLIDN----ILEKINSHLPSHIRILGLKRVTGSFNS 174
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y Y+LP + H +DE + +S + N LL+ ++G H FHN+T
Sbjct: 175 KNRCDARTYFYMLPTFAFAHKDHDIQDE-RYRLSPETLEKVNQLLAGYKGTHNFHNFT 231
>J4W9A0_BEAB2 (tr|J4W9A0) tRNA pseudouridine synthase A OS=Beauveria bassiana
(strain ARSEF 2860) GN=BBA_04043 PE=4 SV=1
Length = 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A KAG I +N D K R
Sbjct: 96 KRKVAVMIGYSGTGYKGMQVNGDE---PTIERDLFQAFIKAGAISKANADDPRKSSLARC 152
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN LP IR++GI + F+
Sbjct: 153 ARTDKGVHAAGNVISLKLII------EDED---IVDKINAALPEQIRIWGIQRTNNSFNC 203
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YLLP+
Sbjct: 204 YQYCDSRFYEYLLPS 218
>G0N1C3_CAEBE (tr|G0N1C3) tRNA pseudouridine synthase OS=Caenorhabditis brenneri
GN=Cbn-pus-1 PE=3 SV=1
Length = 431
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGI----RDSNFGDLDKVKWGRS 118
M +GY G Y G+Q+Q+D L TIE +L A+ KAG I RD F + R+
Sbjct: 38 AMLLGYQGKKYFGMQLQKD---LPTIESKLLEAMEKAGWITPAQRDKPFDFF----FQRA 90
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+ V ++ M M++P D K +G A +N LP IRVFG+ + F P
Sbjct: 91 ARTDRAVSAVRQMCG--MQLPRDDAKYQTEG---AGILNDLLPADIRVFGMRRTTNFFHP 145
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFH---ISEFNSLLSAFEGEHPFHNYTVRSK 235
+++C+ R YSY P+ + + + ++E N +LS ++G H F NYT +
Sbjct: 146 QKQCDYRTYSYTCPSFVFAKPTELTNASYRISPETLAEVNDILSIYKGTHNFFNYTAKRA 205
Query: 236 Y 236
Y
Sbjct: 206 Y 206
>K5VFR3_PHACS (tr|K5VFR3) Uncharacterized protein OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_153289 PE=4 SV=1
Length = 555
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 51/225 (22%)
Query: 55 EPFL-KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
EP L K+ + +G+ G+ Y G+Q+QR+ + TIE L A+ + G + N + KV
Sbjct: 112 EPRLPKRQTALLIGFCGSGYNGMQLQRNHENIKTIEGTLFDALVRVGAVSKDNADNPAKV 171
Query: 114 KWGRSSRTDKGVHSLATMISFKM--EIPEDAWKEDRDGV-VLANRINIYLPNTIRVFGIL 170
+ R++RTD GVH+ ++S KM IP GV L RIN LP IR++ +
Sbjct: 172 NFNRAARTDAGVHAAGNLVSMKMITSIP---------GVDNLIARINEELPQEIRLWDTV 222
Query: 171 PSKKRFDPRRECNLRKYSYLLPADII-------GI------QSHFSEDEIDF-------- 209
+ F+ R CN RKY+Y P+ ++ G+ Q+ S +DF
Sbjct: 223 RVQNAFNARTTCNARKYTYFFPSYLLIPPKPGSGLHKTVFEQNSASSPLLDFWQGVPAES 282
Query: 210 -----------------HISEFNSLLSAFEGEHPFHNYTVRSKYR 237
+ FEG H FHN+TV +Y+
Sbjct: 283 SPNDDLARKRTWRAPKEVVEMLRETAKKFEGSHKFHNFTVGQEYK 327
>G1M533_AILME (tr|G1M533) tRNA pseudouridine synthase (Fragment) OS=Ailuropoda
melanoleuca GN=PUS1 PE=3 SV=1
Length = 409
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 71 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMRKMSFQRC 130
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 131 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 180
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE + +S N LL+ + G H FHN+T
Sbjct: 181 KNKCDARTYFYMLPTFAFAHKDHDVQDE-RYRLSAETLRRVNGLLACYRGTHNFHNFT 237
>G1RAV7_NOMLE (tr|G1RAV7) tRNA pseudouridine synthase (Fragment) OS=Nomascus
leucogenys GN=PUS1 PE=3 SV=1
Length = 379
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 35 KRKIVLLMAYSGKGYHGMQXXXXXXXXXTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 94
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 95 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 144
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 145 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 201
>D2HLG7_AILME (tr|D2HLG7) tRNA pseudouridine synthase (Fragment) OS=Ailuropoda
melanoleuca GN=PANDA_012338 PE=3 SV=1
Length = 359
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 27 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMRKMSFQRC 86
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP IR+ G+ F+
Sbjct: 87 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPPHIRILGLKRVTGGFNS 136
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ +C+ R Y Y+LP + H +DE + +S N LL+ + G H FHN+T
Sbjct: 137 KNKCDARTYFYMLPTFAFAHKDHDVQDE-RYRLSAETLRRVNGLLACYRGTHNFHNFT 193
>G1U5D4_RABIT (tr|G1U5D4) tRNA pseudouridine synthase (Fragment) OS=Oryctolagus
cuniculus GN=LOC100350549 PE=3 SV=1
Length = 400
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 58 KRKIVLLLAYSGKGYHGMQRNVGSSQFRTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 117
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 118 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 167
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + +DE + +S N LL+ ++G H FHN+T +
Sbjct: 168 KNKCDARTYFYMLPTFAFAHKDRDPQDET-YRLSAETLQRVNRLLACYQGTHSFHNFTSQ 226
Query: 234 SKYRK 238
R+
Sbjct: 227 KGPRE 231
>C4QXS5_PICPG (tr|C4QXS5) tRNA:pseudouridine synthase, introduces pseudouridines
at positions 26-28, 34-36, 65, and 67 of tRNA
OS=Komagataella pastoris (strain GS115 / ATCC 20864)
GN=PAS_chr1-4_0212 PE=4 SV=1
Length = 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V +GY GT Y G+Q+ + TIE +L A ++G I N DL K + R+
Sbjct: 82 KKKVACLIGYCGTGYHGMQLNPPQ---KTIEGDLFEAFVESGAISRDNSNDLKKSSFMRA 138
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM I ED D + +IN LP TIRV+G + K FD
Sbjct: 139 ARTDKGVHAAGNVISLKMII------EDED---ILEKINSKLPPTIRVWGYERTNKNFDC 189
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YL+P
Sbjct: 190 RKMCSSRIYEYLMPT 204
>G3JB53_CORMM (tr|G3JB53) tRNA pseudouridine synthase OS=Cordyceps militaris
(strain CM01) GN=CCM_02684 PE=4 SV=1
Length = 585
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A KAG I +N D K R
Sbjct: 96 KRKVAVMIGYSGTGYKGMQVNGDE---PTIERDLFRAFIKAGAISKANADDPRKSSLARC 152
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED + ++IN LP IR++GI + F+
Sbjct: 153 ARTDKGVHAAGNVISLKLIIEEDD---------IVDKINEALPEQIRIWGIQRTNNSFNC 203
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YLLP+
Sbjct: 204 YQYCDSRFYEYLLPS 218
>F2QLN1_PICP7 (tr|F2QLN1) tRNA pseudouridine synthase A OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL
Y-11430 / Wegner 21-1) GN=PUS1 PE=4 SV=1
Length = 516
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V +GY GT Y G+Q+ + TIE +L A ++G I N DL K + R+
Sbjct: 89 KKKVACLIGYCGTGYHGMQLNPPQ---KTIEGDLFEAFVESGAISRDNSNDLKKSSFMRA 145
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM I ED D + +IN LP TIRV+G + K FD
Sbjct: 146 ARTDKGVHAAGNVISLKMII------EDED---ILEKINSKLPPTIRVWGYERTNKNFDC 196
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YL+P
Sbjct: 197 RKMCSSRIYEYLMPT 211
>M9N2J5_ASHGS (tr|M9N2J5) FAFL105Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FAFL105C
PE=4 SV=1
Length = 528
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY GT Y G+Q TIE EL A KAG I +N DL K + R+
Sbjct: 66 KRKVAVMVGYCGTGYHGMQYNPPNR---TIEAELFEAFVKAGAISRANSTDLKKNGFMRA 122
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I + A K ++IN +LP IRV+GI K FD
Sbjct: 123 ARTDKGVHAGGNVISLKLIIEDPAIK---------DKINEHLPPGIRVWGISRVNKAFDC 173
Query: 179 RRECNLRKYSYLLP 192
R+ C R Y YLLP
Sbjct: 174 RKLCGSRWYEYLLP 187
>G1SST0_RABIT (tr|G1SST0) tRNA pseudouridine synthase (Fragment) OS=Oryctolagus
cuniculus GN=LOC100350549 PE=3 SV=1
Length = 389
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 47 KRKIVLLLAYSGKGYHGMQRNVGSSQFRTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 106
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 107 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 156
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ +C+ R Y Y+LP + +DE + +S N LL+ ++G H FHN+T +
Sbjct: 157 KNKCDARTYFYMLPTFAFAHKDRDPQDET-YRLSAETLQRVNRLLACYQGTHSFHNFTSQ 215
Query: 234 SKYRK 238
R+
Sbjct: 216 KGPRE 220
>M3ZFI9_XIPMA (tr|M3ZFI9) tRNA pseudouridine synthase (Fragment) OS=Xiphophorus
maculatus GN=PUS1 PE=3 SV=1
Length = 387
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 18/183 (9%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK VV+ + Y G Y G+Q + TIE +L TA+ K+G I ++ D+ K+ +
Sbjct: 40 YPKKKVVILLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPGNHGDDMRKMSFQ 99
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKK-- 174
R +RTDKGV + ++S K+ + ED + +IN LP IRV + K+
Sbjct: 100 RCARTDKGVSAAGQVVSLKLRLIED----------IIEKINENLPPQIRVLALTGLKRVT 149
Query: 175 -RFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFH-----ISEFNSLLSAFEGEHPFH 228
F+ + C+ R Y+Y+LP + + +E+ F + + N L + ++G H FH
Sbjct: 150 QGFNSKNNCDARTYAYMLPTVAFSPKDYDTENIAAFRLETETLQKVNQLFALYKGTHNFH 209
Query: 229 NYT 231
N+T
Sbjct: 210 NFT 212
>J0CVY8_AURDE (tr|J0CVY8) Pseudouridine synthase OS=Auricularia delicata (strain
TFB10046) GN=AURDEDRAFT_188967 PE=4 SV=1
Length = 531
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 52/221 (23%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + +G+ GT + G+Q Q + TIE EL A+ KAG I + N D K + RS
Sbjct: 102 KRKCALLLGFCGTGFNGMQRQARQLNARTIEGELFAALVKAGAISEDNADDPSKSQLQRS 161
Query: 119 SRTDKGVHSLATMISFKM--EIPEDAWKEDRDGVV-LANRINIYLPNTIRVFGILPSKKR 175
+RTD GVH+ ++S K+ E+P GV L IN LP +IR++ I+ +
Sbjct: 162 ARTDSGVHAAGNVVSIKLITEVP---------GVPDLVAHINDLLPPSIRLWSIVRVQNS 212
Query: 176 FDPRRECNLRKYSYLLPADII-------GIQSHFS-----EDEIDFH------------- 210
F R C+ RKY+Y+ P+ I+ + SH D + H
Sbjct: 213 FSARTSCDSRKYTYVFPSHILLPPKPGSPLHSHLKSSPGVSDAVVNHPFWAEVGAELSPE 272
Query: 211 ---------------ISEFNSLLSAFEGEHPFHNYTVRSKY 236
+ F + L+ + G H FHN+TV+ ++
Sbjct: 273 EERRRKQRWRVGPAALDAFRAALAEYHGTHNFHNFTVQKEF 313
>M2XVR2_GALSU (tr|M2XVR2) tRNA pseudouridine synthase A OS=Galdieria sulphuraria
GN=Gasu_49530 PE=3 SV=1
Length = 943
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY+G Y+G+Q R+ +S IE ELE A+ G I ++ G+L K++W R++RTDKGV
Sbjct: 91 IGYLGAAYQGMQ--RNPGAVS-IEGELEKALVATGLIPNNLEGNLRKIEWSRAARTDKGV 147
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
+ ++S + + +D +E + R+N LP IR+ G+ F + C+ R
Sbjct: 148 SAAGQVVSTYLLVDKDFEREQD----ILKRVNDTLPTDIRILGVYSVSGGFHAKNACDRR 203
Query: 186 KYSYLLPADIIGIQSHFSEDEI---DF------HISEFNSLLSAFEGEHPFHNYTV 232
+YSY+ P+ + E + D+ + + N LL F G H FHN+TV
Sbjct: 204 RYSYMFPSWTLCRSKQEHEKMLKDSDYKNIMKAKVDDLNDLLKYFIGTHHFHNFTV 259
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 343 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 402
G+ ++ + + G SF+LHQIRKM+G A+AV + IP++ ++SL K R+ P+AP L
Sbjct: 285 GESFLNVTVVGQSFLLHQIRKMIGLAIAVSKGWIPKEAFNVSLSKHHRLETPMAPSLGLF 344
Query: 403 L 403
L
Sbjct: 345 L 345
>H2NJ61_PONAB (tr|H2NJ61) tRNA pseudouridine synthase OS=Pongo abelii GN=PUS1
PE=3 SV=1
Length = 424
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 80 KRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 139
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ W D + +IN +LP+ IR+ G+ F+
Sbjct: 140 ARTDKGVSAAGQVVSLKV------WLIDN----ILEKINSHLPSHIRILGLKRVTGGFNS 189
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYT 231
+ C+ R Y YLLP + +DE + +S + N LL+ ++G H FHN+T
Sbjct: 190 KNRCDARTYCYLLPTFAFAHKDRDVQDET-YRLSAETLQQVNRLLACYKGTHNFHNFT 246
>Q9XXN0_CAEEL (tr|Q9XXN0) tRNA pseudouridine synthase OS=Caenorhabditis elegans
GN=pus-1 PE=2 SV=1
Length = 415
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 63 VMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTD 122
M +GY G Y G+Q+Q+D L TIE +L A+ AG I + + R++RTD
Sbjct: 36 AMLLGYQGKKYYGMQLQKD---LPTIESKLLEAMETAGWITTAQKEKPFDFFFQRAARTD 92
Query: 123 KGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRREC 182
+ V + M M++P D K +G + N I LP IRVFG+ + F P+++C
Sbjct: 93 RAVSAARQMCG--MQLPRDDAKYQAEGAGILNNI---LPADIRVFGMRRTTNFFHPQKQC 147
Query: 183 NLRKYSYLLPADIIGIQSHFSEDEIDFH---ISEFNSLLSAFEGEHPFHNYTVRSKY 236
+ R YSY P+ + + + ++E NS+LS + G H F NYT + Y
Sbjct: 148 DHRTYSYTCPSFVFAKPTELTNSSFRLSPETLAEVNSILSIYLGTHNFFNYTAKRAY 204
>G0RJ00_HYPJQ (tr|G0RJ00) Putative uncharacterized protein (Fragment) OS=Hypocrea
jecorina (strain QM6a) GN=TRIREDRAFT_27492 PE=4 SV=1
Length = 507
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A KAG I +N D K R
Sbjct: 58 KRKVAVMIGYAGTGYKGMQLNGDEE---TIERDLFQAFIKAGAISKANADDPRKSSLARC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN LP IRV+GI + F+
Sbjct: 115 ARTDKGVHAAGNVISLKLII------EDED---IVDKINEALPAQIRVWGIQRTNNSFNC 165
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 166 YQYCDSRWYEYLMPS 180
>G9NCA3_HYPVG (tr|G9NCA3) Uncharacterized protein (Fragment) OS=Hypocrea virens
(strain Gv29-8 / FGSC 10586) GN=TRIVIDRAFT_13584 PE=4
SV=1
Length = 505
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A KAG I +N D K R
Sbjct: 58 KRKVAVMIGYAGTGYKGMQLNGDEE---TIERDLFQAFIKAGAISKANADDPRKSSLARC 114
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED + ++IN LP IRV+GI + ++
Sbjct: 115 ARTDKGVHAAGNVISLKLIIEEDD---------IVDKINEALPAQIRVWGIQRTNNSYNC 165
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 166 YQYCDSRWYEYLMPS 180
>G2XHH6_VERDV (tr|G2XHH6) tRNA pseudouridine synthase OS=Verticillium dahliae
(strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)
GN=VDAG_09730 PE=4 SV=1
Length = 626
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY GT Y GLQI DE TIE +L A AG I +N D K R
Sbjct: 141 KRKVAVMVGYSGTGYYGLQINWDE---KTIEGDLFKAFITAGAISKANADDPKKSSLSRC 197
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN +LP+ IRV+G+ + F
Sbjct: 198 ARTDKGVHAAGNLISLKLII------EDDD---IVDKINAHLPDQIRVWGLQRTSNSFSA 248
Query: 179 RRECNLRKYSYLLP 192
+ C+ R Y YLLP
Sbjct: 249 YQACDSRWYEYLLP 262
>F1QWW1_DANRE (tr|F1QWW1) tRNA pseudouridine synthase OS=Danio rerio GN=pus1 PE=3
SV=1
Length = 412
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q + TIE EL TA+ A I + + ++ K+ +
Sbjct: 73 YPKKKVALLMAYSGKGYYGMQRNARNSQFKTIEDELVTALVGARCIPEGHAEEMKKMSFQ 132
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RS+RTDKGV ++ ++S K+ + E+ + +IN +LP IRV G F
Sbjct: 133 RSARTDKGVSAVGQVVSLKVWMIEN----------ILEKINAHLPPQIRVLGCKRVTGGF 182
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFHNYT 231
+ + C R YSY+LP + + ED F ++ N L ++G H FHN+T
Sbjct: 183 NSKNNCYARTYSYMLPTVAFSPKDYNQED-TSFRLTSDTLQTVNRLFGLYKGTHNFHNFT 241
Query: 232 VRSKYR 237
+ +R
Sbjct: 242 SQKGHR 247
>L5KTU6_PTEAL (tr|L5KTU6) tRNA pseudouridine synthase OS=Pteropus alecto
GN=PAL_GLEAN10008708 PE=3 SV=1
Length = 409
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 16/190 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ +V+ V Y G Y G+Q + TIE +L +A+ ++G I +++ D+ K+ + R
Sbjct: 89 KRKIVLLVAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRC 148
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ + +D + +IN +LP+ IR+ G+ F+
Sbjct: 149 ARTDKGVSAAGQVVSLKVWLIDD----------ILEKINSHLPSHIRILGLKRVTGGFNS 198
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-----EFNSLLSAFEGEHPFHNYTVR 233
+ C+ R Y Y+LP + +DE + +S N LL+ ++G H FHN+T +
Sbjct: 199 KNRCDARTYLYMLPTFAFAHKDRDVQDET-YRLSAETLRRVNRLLARYKGTHNFHNFTSQ 257
Query: 234 SKYRKKHHAR 243
R+ R
Sbjct: 258 KGPREPSAQR 267
>G9P6Z9_HYPAI (tr|G9P6Z9) Putative uncharacterized protein OS=Hypocrea
atroviridis (strain ATCC 20476 / IMI 206040)
GN=TRIATDRAFT_228328 PE=4 SV=1
Length = 566
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A KAG I +N D K R
Sbjct: 74 KRKVAVMIGYAGTGYKGMQLNGDEE---TIERDLFQAFVKAGAISKANADDPRKSSLARC 130
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN LP IRV+GI + ++
Sbjct: 131 ARTDKGVHAAGNVISLKLII------EDED---IVDKINEALPPQIRVWGIQRTNNSYNC 181
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 182 YQYCDSRWYEYLMPS 196
>M7BSX9_CHEMY (tr|M7BSX9) Uncharacterized protein OS=Chelonia mydas GN=UY3_02462
PE=4 SV=1
Length = 1937
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 52 DKWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
D+ + F K+ +V+ + Y G Y G+Q + TIE +L +A+ ++G I +++ D+
Sbjct: 45 DQNKKFPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALIRSGCIPENHGEDMK 104
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILP 171
K+ + R +RTDKGV + ++S K+ + +D + +IN LP+ IR+ G+
Sbjct: 105 KMSFQRCARTDKGVSAAGQIVSLKIWLIDDVLE----------KINNCLPSHIRILGLKR 154
Query: 172 SKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEI----DFHISEFNSLLSAFEGEHPF 227
F + +C+ R Y Y+LP + +D+ + + N LL+ ++G H F
Sbjct: 155 VTGGFSSKNKCDARTYFYMLPTFAFAHKDRDIQDKTYRLNKETLEKVNKLLACYKGTHNF 214
Query: 228 HNYT 231
HN+T
Sbjct: 215 HNFT 218
>R9APG6_WALIC (tr|R9APG6) tRNA pseudouridine synthase 1 OS=Wallemia ichthyophaga
EXF-994 GN=J056_002008 PE=4 SV=1
Length = 640
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 44/220 (20%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + VG+ GT Y G+QIQ + TIE E+ A+ AG I N D KV R+
Sbjct: 162 KRKCAVIVGFCGTGYNGMQIQPHAN-TRTIEGEIFLAMVNAGVISRENSTDPGKVNLQRA 220
Query: 119 SRTDKGVHSLATMISFKM--EIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
+RTD VH+ + +IS KM E+PE D V IN +LP IR++G + ++ F
Sbjct: 221 ARTDASVHAASNVISLKMIVELPEQG-----DPVAA---INSHLPPHIRIWGYVRTQNSF 272
Query: 177 DPRRECNLRKYSYLLPADI-------------IGIQSHF-SEDEIDFH------------ 210
D R C+ R+Y YLLP+ + +G Q F SE+ +D +
Sbjct: 273 DARNSCDSRRYEYLLPSYVFLPPAPWTNLGKRLGTQHPFWSEEGVDENESVEGMMQRKRA 332
Query: 211 -------ISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
+S+ + L F G H F +YT+ + ++ R
Sbjct: 333 WRIDTDTLSKARATLQHFTGSHNFWSYTIGKAFTERSAQR 372
>E6ZSJ4_SPORE (tr|E6ZSJ4) Related to PUS1-pseudouridine synthase 1 OS=Sporisorium
reilianum (strain SRZ2) GN=sr16406 PE=4 SV=1
Length = 570
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 55/234 (23%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V ++ GY G Y GLQI + TIE ++ A AG + N + +KV R+
Sbjct: 93 KRKVAVKFGYCGIGYSGLQINPG---VKTIEGDIFQAFCTAGAVSADNAVNPNKVGLQRA 149
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+GVH+ ++S K+ + D +E G L +R+N LP IRV+G+ + F
Sbjct: 150 ARTDRGVHAAGNLLSLKLILQPDGLQE---GETLVDRVNALLPEFIRVWGVTRVQNGFSA 206
Query: 179 RRECNLRKYSYLLP---------------------------------ADII--------G 197
R+ C+ R Y YLLP D++ G
Sbjct: 207 RQSCDSRMYEYLLPTYVFVPPKPGSTMHDMLVRMRDDELAKTGATTLGDVVDHAFWTQHG 266
Query: 198 IQSHFSED---EIDFH-----ISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
FS D + F ++ S+ + + G H FHN+TV ++R + R
Sbjct: 267 TTHDFSTDMRAKTAFRLPASALARIRSIFARYLGSHNFHNFTVGKEFRDRSCQR 320
>F1REI9_DANRE (tr|F1REI9) tRNA pseudouridine synthase OS=Danio rerio GN=pus1 PE=3
SV=1
Length = 376
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q + TIE EL TA+ A I + + ++ K+ +
Sbjct: 37 YPKKKVALLMAYSGKGYYGMQRNARNSQFKTIEDELVTALVGARCIPEGHAEEMKKMSFQ 96
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RS+RTDKGV ++ ++S K+ + E+ + +IN +LP IRV G F
Sbjct: 97 RSARTDKGVSAVGQVVSLKVWMIEN----------ILEKINAHLPPQIRVLGCKRVTGGF 146
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFHNYT 231
+ + C R YSY+LP + + ED F ++ N L ++G H FHN+T
Sbjct: 147 NSKNNCYARTYSYMLPTVAFSPKDYNQED-TSFRLTSDTLQTVNRLFGLYKGTHNFHNFT 205
Query: 232 VRSKYR 237
+ +R
Sbjct: 206 SQKGHR 211
>G8BTZ1_TETPH (tr|G8BTZ1) Uncharacterized protein OS=Tetrapisispora phaffii
(strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282
/ UCD 70-5) GN=TPHA0E02790 PE=4 SV=1
Length = 558
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY G Y G+Q TIE EL A +AGGI +N DL K + R+
Sbjct: 69 KRKVAVMVGYCGAGYHGMQYNPPN---DTIESELFRAFVRAGGISLANSNDLKKNGFMRA 125
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM I ED D + ++IN LP +IRV+ I K FD
Sbjct: 126 ARTDKGVHAGGNLISLKMII------EDPD---IKDKINEALPESIRVWNIERVNKAFDC 176
Query: 179 RRECNLRKYSYLLPA 193
R+ C R Y YLLP
Sbjct: 177 RKMCGSRWYEYLLPT 191
>Q6FJJ6_CANGA (tr|Q6FJJ6) tRNA pseudouridine synthase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0M05797g PE=3 SV=1
Length = 317
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
+ + +GY+GT Y+G+Q H TI+ EL A+ I SN D K + R++RT
Sbjct: 1 MALVLGYLGTGYQGIQYNPPAH---TIDNELFKALVATNCISQSNSDDFSKSSFSRATRT 57
Query: 122 DKGVHSLATMISFKM---EIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
DKGVH+L +++ KM E+P+ E +N LP+ IR++ ++P KK+F+
Sbjct: 58 DKGVHALTNLVALKMQRYEVPQQVKAE----------LNEILPDDIRIWDVVPVKKKFNA 107
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSK 235
R R Y Y++P ++ H D ++ F ++ + F G H ++N+T R K
Sbjct: 108 RVMAGTRHYRYVIPTFLLQCGPH--SDLSTSQLARFKNIWNMFLGTHNYYNFTPRRK 162
>Q54FA0_DICDI (tr|Q54FA0) tRNA pseudouridylate synthase OS=Dictyostelium
discoideum GN=pus1 PE=4 SV=1
Length = 596
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 38/209 (18%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY GT+Y G+Q L T+E+ELE A+++ GGI N KV W R
Sbjct: 139 KKKVAIILGYSGTNYAGMQ---KNPGLKTVEEELEHALFRTGGISPDNMYYQQKVDWIRC 195
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ ++S KME+ D +G+ +A +N LP I VF I+ F
Sbjct: 196 ARTDKGVSAIRNVVSLKMEM----GPPDFEGMKIA--LNKELPKDITVFHIMRVNNSFHA 249
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDF---------------------HISEFNSL 217
+ + R Y Y+ P + + FS+ +S N +
Sbjct: 250 KNAVDARSYIYVTPTHVF--EPKFSKKNKSIVEEAANGGENNTQPPWKFTSDTLSILNKV 307
Query: 218 LSAFEGEHPFHNYTVR------SKYRKKH 240
LS + G H FHNYT R S +RK H
Sbjct: 308 LSFYLGNHRFHNYTSRKESNDVSVFRKIH 336
>H2RY29_TAKRU (tr|H2RY29) tRNA pseudouridine synthase OS=Takifugu rubripes
GN=LOC101066687 PE=3 SV=1
Length = 387
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q TIE +L A+ K+G I ++ D+ K+ +
Sbjct: 40 YPKKKVALLMAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPQNHGDDMKKMSFQ 99
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
R +RTDKGV + ++S K+ + +D L +IN +LP IR+ G+ + F
Sbjct: 100 RCARTDKGVSAAGQVVSLKLLLIDD----------LTEKINEHLPPQIRILGVKRVTQGF 149
Query: 177 DPRRECNLRKYSYLLPA--------DIIGIQSHFS-EDEIDFHISEFNSLLSAFEGEHPF 227
+ + C+ R Y+Y+LP D G F + E + N L + ++G H F
Sbjct: 150 NSKNNCDARTYAYMLPTVAFSPKDFDAAGTAPSFRLQPET---LQRVNHLFAHYKGTHNF 206
Query: 228 HNYT 231
HN+T
Sbjct: 207 HNFT 210
>Q4T6B0_TETNG (tr|Q4T6B0) tRNA pseudouridine synthase (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00006401001 PE=3 SV=1
Length = 375
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q TIE +L A+ K+G I +++ D+ K+ +
Sbjct: 72 YPKKKVALLLAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPENHAEDMKKMSFQ 131
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
R +RTDKGV + ++S K+ + +D LA +IN +LP IRV G+ + F
Sbjct: 132 RCARTDKGVSAAGQVVSLKLWLIDD----------LAEKINQHLPPQIRVLGVKRVTQGF 181
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFH------ISEFNSLLSAFEGEHPFHNY 230
+ + C+ R Y+Y+LP + + + + N L + ++G H FHN+
Sbjct: 182 NSKNNCDARTYAYMLPTVAFAPKDSDAASDAASFRLQPETLQRVNRLFALYKGTHNFHNF 241
Query: 231 T 231
T
Sbjct: 242 T 242
>I2K0P3_DEKBR (tr|I2K0P3) tRNA pseudouridine synthase OS=Dekkera bruxellensis
AWRI1499 GN=AWRI1499_1283 PE=3 SV=1
Length = 379
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V +GY G Y G+QI TIE +L A+ +AG I +N DL K + R+
Sbjct: 32 KKKVACLIGYCGAGYHGMQINPPN---KTIEGDLFKAMVEAGAISKNNSNDLKKSGFMRA 88
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS KM + ED D + +IN LP IRV+G K FD
Sbjct: 89 ARTDKGVHAAGNVISLKMIV------EDED---VVEKINQALPEQIRVWGYQRVNKSFDC 139
Query: 179 RRECNLRKYSYLLPA 193
R+ C+ R Y YL+P
Sbjct: 140 RKMCSSRIYEYLMPT 154
>K4B5X8_SOLLC (tr|K4B5X8) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc02g043870.1 PE=4 SV=1
Length = 247
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 223 GEHPFHNYTVRSKYRKKHHARKSPGNGIMSNK---TGXXXXXXXXXXXXXXXDVDDFVST 279
GEHPFHNYT+RSKYRK+ AR N + K + + V T
Sbjct: 4 GEHPFHNYTIRSKYRKQSPARILLKNDSLLKKGRPSSEKEISGSEECDGEQIGKEQGVLT 63
Query: 280 TLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQ 339
+ ++Q N NS++ ++ARWL+E D D+LN +HFR+I C KL+
Sbjct: 64 IVEAENQNTEGNCNEKVNHSKDLNSAIPIQARWLHESDVRDKLNSAHFRRIFHRHCEKLE 123
Query: 340 RLLGKDYVEIKIWGDSFMLHQ 360
LL +YVE+ I G+SF LHQ
Sbjct: 124 NLLDINYVEVSICGESFTLHQ 144
>Q5PR50_DANRE (tr|Q5PR50) tRNA pseudouridine synthase OS=Danio rerio GN=pus1 PE=2
SV=1
Length = 376
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q + TIE EL TA+ A I + + ++ K+ +
Sbjct: 37 YPKKKVALLMAYSGKGYYGMQRNARNSQFKTIEDELVTALVGARCIPEGHAEEMKKMSFQ 96
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
RS+RTDKGV ++ ++S K+ + E+ + +IN +LP IRV G F
Sbjct: 97 RSARTDKGVSAVGRVVSLKVWMIEN----------ILEKINAHLPPRIRVLGCKRVTGGF 146
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFHNYT 231
+ + C R YSY+LP + + ED F ++ N L ++G H FHN+T
Sbjct: 147 NSKNNCYARTYSYMLPTVAFSPKDYNQED-TSFRLTSDTLQTVNRLFCLYKGTHNFHNFT 205
Query: 232 VRSKYR 237
+ +R
Sbjct: 206 SQKGHR 211
>H3CE76_TETNG (tr|H3CE76) tRNA pseudouridine synthase OS=Tetraodon nigroviridis
GN=PUS1 PE=3 SV=1
Length = 393
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ KK V + + Y G Y G+Q TIE +L A+ K+G I +++ D+ K+ +
Sbjct: 42 YPKKKVALLLAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPENHAEDMKKMSFQ 101
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
R +RTDKGV + ++S K+ + +D LA +IN +LP IRV G+ + F
Sbjct: 102 RCARTDKGVSAAGQVVSLKLWLIDD----------LAEKINQHLPPQIRVLGVKRVTQGF 151
Query: 177 DPRRECNLRKYSYLLPADIIGIQSHFSEDEIDF------HISEFNSLLSAFEGEHPFHNY 230
+ + C+ R Y+Y+LP + + + + N L + ++G H FHN+
Sbjct: 152 NSKNNCDARTYAYMLPTVAFAPKDSDAASDAASFRLQPETLQRVNRLFALYKGTHNFHNF 211
Query: 231 T 231
T
Sbjct: 212 T 212
>J7R7L3_KAZNA (tr|J7R7L3) tRNA pseudouridine synthase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC
22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)
GN=KNAG0F01920 PE=3 SV=1
Length = 372
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 39/207 (18%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + GY G+ G+Q D R T+E L AI G I N D+ K W R+
Sbjct: 11 KRRVAVLFGYSGSQLYGMQYIADASRFPTVESRLFDAIRGTGAIMAHNSDDIYKNGWNRA 70
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
RTDKGVH+L ++S K+ + D L R+N LP IRV+ I K+F
Sbjct: 71 CRTDKGVHALGNVVSLKLNLTAD----------LVPRLNAQLPEGIRVWAIQSVNKQFSG 120
Query: 179 RRECNLRKYSYLLPADIIGIQSHFS----------EDEIDFH------------------ 210
+ C R Y Y+ P+ I+ S F +++ ++
Sbjct: 121 KTACGGRWYEYIFPSFILMGHSKFHRIRLNQSQKFDEDTNYEAYAKSLQVPLSQYRVDQD 180
Query: 211 -ISEFNSLLSAFEGEHPFHNYTVRSKY 236
+S + + G H FHN+T + ++
Sbjct: 181 TVSSLRQYMQEYLGTHNFHNFTTKKQF 207
>E6RFY2_CRYGW (tr|E6RFY2) Pseudouridylate synthase, putative OS=Cryptococcus
gattii serotype B (strain WM276 / ATCC MYA-4071)
GN=CGB_N1220W PE=4 SV=1
Length = 560
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 54 WEP---------FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRD 104
WEP K+ + +GY GT Y+G+QIQ +H TIE E+ A+ KAG +
Sbjct: 108 WEPREKTDGEKRLPKRRCAVLIGYCGTGYQGMQIQ--DHTDRTIEGEIFAALVKAGAVSA 165
Query: 105 SNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTI 164
N D KV R++RTD GVH+ +IS KM I E E V A +N +LP+ I
Sbjct: 166 DNAVDARKVDIARAARTDAGVHAAGNVISIKM-ITEPPLPEGFKNV--AEYVNTFLPDQI 222
Query: 165 RVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGE 224
R++G + + K F+ R + R Y YLLP+ + I H +D + H+ + GE
Sbjct: 223 RMWGWVRTVKSFNARTAADSRIYEYLLPSYCL-IPPH-KDDPLAKHLDISSPDWREIVGE 280
Query: 225 HP 226
+P
Sbjct: 281 YP 282
>C4Y6M3_CLAL4 (tr|C4Y6M3) tRNA pseudouridine synthase (Fragment) OS=Clavispora
lusitaniae (strain ATCC 42720) GN=CLUG_03807 PE=3 SV=1
Length = 229
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 66 VGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRTDKGV 125
+GY GT Y G+QIQ + + TIE E+ A AG + N DL K + R++RTDKGV
Sbjct: 2 IGYCGTGYNGMQIQNNPD-VKTIEAEIFKAFIAAGAVSQENSTDLKKNGFMRAARTDKGV 60
Query: 126 HSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPRRECNLR 185
H+ +IS K+ + ED D + ++IN +LP IR++GI + FD R+ C+ R
Sbjct: 61 HAAGNVISCKLIL------EDED---IMHKINSHLPEKIRLWGIERVNRSFDCRKLCSSR 111
Query: 186 KYSYLLPA 193
Y YLLP
Sbjct: 112 VYEYLLPT 119
>Q54LM5_DICDI (tr|Q54LM5) Putative uncharacterized protein OS=Dictyostelium
discoideum GN=DDB_0187011 PE=4 SV=1
Length = 615
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK + + Y G+ Y G D R IE +E ++ + G I N G+L ++K RS
Sbjct: 147 KKPMALCFAYNGSKYYGSSYSFD-IRFPAIENLIEKSLIRNGHIALENIGNLKRIKLSRS 205
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGV---VLANRINIYLPNTIRVFGILPSKKR 175
SRTDKGVHS++T+IS + I ++ + + G + IN YLP+ IR+ +
Sbjct: 206 SRTDKGVHSVSTVISAFLLIDKETERLAQFGTPPQYFIDNINRYLPSDIRLISATKPSRT 265
Query: 176 FDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
F R R Y+YL+P D H D I NS+LS F G FHNYT
Sbjct: 266 FRARPASKSRVYNYLVPMD------HLK----DISIDRMNSILSNFIGTSSFHNYT 311
>I4YHS9_WALSC (tr|I4YHS9) Pseudouridine synthase OS=Wallemia sebi (strain ATCC
MYA-4683 / CBS 633.66) GN=WALSEDRAFT_67179 PE=4 SV=1
Length = 531
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 42/218 (19%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + +G+ GT Y G+QIQ + TIE ++ A+ KAG I N D KV R+
Sbjct: 69 KRKCAVIIGFCGTGYNGMQIQ-PHGNVKTIEGDIFVAMIKAGVISPDNSTDPGKVNLQRA 127
Query: 119 SRTDKGVHSLATMISFKM--EIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
+RTD VH+ +IS KM ++P D + +IN +LPN IR++G + ++ F
Sbjct: 128 ARTDASVHAAFNVISLKMIVDLP--------DTPDIVEKINEHLPNHIRIWGFVRTQNSF 179
Query: 177 DPRRECNLRKYSYLLPA------------------------------DIIGIQSHFSEDE 206
D R C+ R Y YLLP+ DI + +
Sbjct: 180 DARTSCDSRSYEYLLPSYVFIPPSPWSNLGKRLKSSHPFWEGVDETEDIASMMTRKRAYR 239
Query: 207 IDFH-ISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
ID + L+ FEG H F +YT+ +R + R
Sbjct: 240 IDSDTLDRARETLAQFEGSHNFWSYTIGKGFRDRSSQR 277
>A7RII9_NEMVE (tr|A7RII9) tRNA pseudouridine synthase (Fragment) OS=Nematostella
vectensis GN=v1g32495 PE=3 SV=1
Length = 300
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK + + Y G Y G+QI + TIE++L A+++A I D L K+ + R
Sbjct: 1 KKKCALLISYCGVGYAGMQINPG---VRTIEEQLINALHQAEVITDDAKECLGKMSFQRC 57
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV + ++S K+ L +IN +LP IR+FG++ + K FD
Sbjct: 58 ARTDKGVSAARQVVSLKISALSS----------LLPKINSFLPPEIRIFGMIKTTKAFDC 107
Query: 179 RRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTVRSKY 236
++ C+ R Y YL P + + S E I E N LS ++G +HN+T K+
Sbjct: 108 KQNCSARTYEYLTPTFAFA-KDYVSRTE---KIEEINKALSNYKGTKNYHNFTSGKKF 161
>M1WCJ0_CLAPU (tr|M1WCJ0) Probable PUS1-tRNA-pseudouridine synthase 1
OS=Claviceps purpurea 20.1 GN=CPUR_05496 PE=4 SV=1
Length = 629
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A A I +N D K R
Sbjct: 117 KRKVAVMIGYSGTGYKGMQVNGDE---PTIERDLFRAFIDAKAISKANADDPRKSSLARC 173
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED + + +RIN +LP IRV+GI + F+
Sbjct: 174 ARTDKGVHAAGNVISLKLII------EDEN---IVDRINAHLPEQIRVWGIQRTNNSFNC 224
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YLLP+
Sbjct: 225 YQYCDSRWYEYLLPS 239
>J9VYS1_CRYNH (tr|J9VYS1) Pseudouridylate synthase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_06353 PE=4 SV=1
Length = 539
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 54 WEP---------FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRD 104
WEP K+ + +GY GT Y+G+QIQ +H TIE E+ A+ KAG +
Sbjct: 87 WEPREKTDGEKRLPKRRCAVLIGYCGTGYQGMQIQ--DHTDRTIEGEIFAALVKAGAVSA 144
Query: 105 SNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTI 164
N D KV R++RTD GVH+ +IS KM I E E V A +N +LP+ I
Sbjct: 145 DNAVDARKVDIARAARTDAGVHAAGNVISIKM-ITEPPLPEGFKDV--AEYVNTFLPDQI 201
Query: 165 RVFGILPSKKRFDPRRECNLRKYSYLLPA 193
R++G + + K F+ R + R Y YLLP+
Sbjct: 202 RMWGWVRTVKSFNARTAADSRIYEYLLPS 230
>E7R1Z2_PICAD (tr|E7R1Z2) tRNA pseudouridine synthase OS=Pichia angusta (strain
ATCC 26012 / NRRL Y-7560 / DL-1) GN=HPODL_0252 PE=3 SV=1
Length = 491
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + Y GT Y G+Q+ TIE +L A KAG I +N DL K + R+
Sbjct: 78 KKKVACYLSYCGTGYHGMQMNPP---AKTIEGDLFDAFVKAGAISKNNSNDLKKSSFMRA 134
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D L +IN YLP+ IR +G K FD
Sbjct: 135 ARTDKGVHAAGNVISLKLII------EDPD---LVEKINSYLPDQIRFWGYERVNKSFDC 185
Query: 179 RRECNLRKYSYLLP 192
R+ C+ R Y YL+P
Sbjct: 186 RKVCSSRIYEYLMP 199
>Q7S319_NEUCR (tr|Q7S319) Putative uncharacterized protein OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=NCU07528 PE=4 SV=1
Length = 625
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE +L A KAG I +N D K R
Sbjct: 120 KRKVAVLIGYAGTGYHGIQIN---HKEKTIEGDLFAAFVKAGAISKANADDPKKSSLVRC 176
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ A ++S K+ + ED D + ++IN +LP+ I+V+GI F
Sbjct: 177 ARTDKGVHAAANVLSLKLIV------EDED---IVDKINSHLPDQIKVWGIQRVTNGFSC 227
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 228 YQACDSRWYEYLMPS 242
>Q5K777_CRYNJ (tr|Q5K777) Pseudouridylate synthase, putative OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=CNN00820 PE=4 SV=1
Length = 560
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 54 WEP---------FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRD 104
WEP K+ + +GY GT Y+G+QIQ +H TIE E+ A+ KAG +
Sbjct: 108 WEPSEKTNGEKRLPKRRCAVLIGYCGTGYQGMQIQ--DHTDRTIEGEVFAALVKAGAVSA 165
Query: 105 SNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTI 164
N D KV R++RTD GVH+ +IS KM I E E V A +N +LP+ I
Sbjct: 166 DNAIDARKVDIARAARTDAGVHAAGNVISIKM-ITEPPLPEGFKDV--AEYVNTFLPDQI 222
Query: 165 RVFGILPSKKRFDPRRECNLRKYSYLLPA 193
R++G + + K F+ R + R Y YLLP+
Sbjct: 223 RMWGWVRTVKSFNARTAADSRIYEYLLPS 251
>Q5AZW5_EMENI (tr|Q5AZW5) tRNA pseudouridine synthase, putative (AFU_orthologue;
AFUA_2G08460) OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN6165.2
PE=4 SV=1
Length = 574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY GT Y+G+Q+ E TIE EL TA AG I +N D K R
Sbjct: 78 KKKVAVLIGYSGTGYKGMQLSTTE---KTIEGELFTAFVAAGAISKANAADPKKSSLVRC 134
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D + +IN +L IRV+GIL + K F
Sbjct: 135 ARTDKGVHAAGNIVSLKLIV------EDPD---IVQKINDHLSPQIRVWGILVANKSFSS 185
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 186 YQMCDSRIYEYLIPS 200
>Q55HN9_CRYNB (tr|Q55HN9) Putative uncharacterized protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=CNBN0810 PE=4 SV=1
Length = 560
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 54 WEP---------FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRD 104
WEP K+ + +GY GT Y+G+QIQ +H TIE E+ A+ KAG +
Sbjct: 108 WEPSEKTNGEKRLPKRRCAVLIGYCGTGYQGMQIQ--DHTDRTIEGEVFAALVKAGAVSA 165
Query: 105 SNFGDLDKVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTI 164
N D KV R++RTD GVH+ +IS KM I E E V A +N +LP+ I
Sbjct: 166 DNAIDARKVDIARAARTDAGVHAAGNVISIKM-ITEPPLPEGFKDV--AEYVNTFLPDQI 222
Query: 165 RVFGILPSKKRFDPRRECNLRKYSYLLPA 193
R++G + + K F+ R + R Y YLLP+
Sbjct: 223 RMWGWVRTVKSFNARTAADSRIYEYLLPS 251
>R4XMG5_9ASCO (tr|R4XMG5) Uncharacterized protein OS=Taphrina deformans PYCC 5710
GN=TAPDE_004806 PE=4 SV=1
Length = 568
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V +GY GT + G+Q+ TIE L A+ K G + N D KV + R+
Sbjct: 128 KRKVACLIGYCGTGFHGMQLNPPNR---TIESTLFEALVKCGAVSADNADDPKKVSFLRA 184
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ IS KM I D L RIN LP IRV+ I + K F+P
Sbjct: 185 ARTDKGVHAAVNAISLKMII---------DDPQLIERINSELPGEIRVWKITRTMKSFNP 235
Query: 179 RRECNLRKYSYLLPA 193
R C+ R Y YL+P
Sbjct: 236 RTSCDSRVYEYLIPT 250
>G4URI6_NEUT9 (tr|G4URI6) Pseudouridine synthase OS=Neurospora tetrasperma
(strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_157590 PE=4
SV=1
Length = 629
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE +L A KAG I +N D K R
Sbjct: 120 KRKVAVLIGYAGTGYHGIQIN---HKEKTIEGDLFAAFVKAGAISKANADDPKKSSLVRC 176
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ A ++S K+ + ED D + ++IN +LP+ I+V+GI F
Sbjct: 177 ARTDKGVHAAANVLSLKLIV------EDED---IVDKINSHLPDQIKVWGIQRVTNGFSC 227
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 228 YQACDSRWYEYLMPS 242
>F8MKT3_NEUT8 (tr|F8MKT3) Putative uncharacterized protein OS=Neurospora
tetrasperma (strain FGSC 2508 / ATCC MYA-4615 / P0657)
GN=NEUTE1DRAFT_64057 PE=4 SV=1
Length = 629
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE +L A KAG I +N D K R
Sbjct: 120 KRKVAVLIGYAGTGYHGIQIN---HKEKTIEGDLFAAFVKAGAISKANADDPKKSSLVRC 176
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ A ++S K+ + ED D + ++IN +LP+ I+V+GI F
Sbjct: 177 ARTDKGVHAAANVLSLKLIV------EDED---IVDKINSHLPDQIKVWGIQRVTNGFSC 227
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 228 YQACDSRWYEYLMPS 242
>M9M4H0_9BASI (tr|M9M4H0) Pseudouridylate synthase OS=Pseudozyma antarctica T-34
GN=PANT_15c00013 PE=4 SV=1
Length = 649
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V ++ GY G Y GLQI + TIE ++ A AG + N + +KV R+
Sbjct: 193 KRKVAVKFGYCGIGYSGLQINPG---VKTIEGDIFDAFCTAGAVSKDNAVNPNKVGLQRA 249
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+GVH+ ++S K+ + D +E G L +++N LP IR++G+ + F+
Sbjct: 250 ARTDRGVHAAGNLLSLKLILQPDGLQE---GETLVDKVNSLLPEFIRIWGVTRVQNGFNA 306
Query: 179 RRECNLRKYSYLLP 192
R+ C+ R Y YLLP
Sbjct: 307 RQSCDSRMYEYLLP 320
>Q00ST8_OSTTA (tr|Q00ST8) tRNA pseudouridine synthase OS=Ostreococcus tauri
GN=Ot18g00790 PE=3 SV=1
Length = 450
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 56 PFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKW 115
P K+ + YVG Y G+Q + TIE ELE AI +AGGI D+N GD KV+W
Sbjct: 38 PNKKRKCALTFAYVGAGYAGMQRNPG---VRTIEGELEGAIARAGGISDANAGDFAKVQW 94
Query: 116 GRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKR 175
R++RTDKGV ++ +I+ KM + D + RIN LP VFGI
Sbjct: 95 TRAARTDKGVSAVGQVIALKMVMEPDG---------MLARINEALPERFEVFGI------ 139
Query: 176 FDPRRECNLRKYSYLLP--ADIIGIQSHFSEDEIDFHISE-----FNSLLSAFEGEHPFH 228
+ Y Y++P A + +E E F +E +L + G H FH
Sbjct: 140 -----DRVTGGYEYVIPTWAFDPNLFVEGAEKE-KFTFTEETRRRVERVLGNYCGTHNFH 193
Query: 229 NYTVRSK 235
NYTV+ K
Sbjct: 194 NYTVKVK 200
>R9NY03_9BASI (tr|R9NY03) tRNA pseudouridine synthase OS=Pseudozyma hubeiensis
SY62 GN=PHSY_001188 PE=4 SV=1
Length = 567
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 58/237 (24%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V ++ GY G Y GLQI + TIE ++ A AG + N + +KV R+
Sbjct: 117 KRKVAVKFGYCGIGYSGLQINPG---VKTIEGDIFDAFCTAGAVSSDNAVNPNKVGLQRA 173
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTD+GVH+ ++S K+ + D K G L +++N LP+ IR++GI + F+
Sbjct: 174 ARTDRGVHAAGNLLSLKLILQPDGLKP---GETLVDKVNSLLPDFIRIWGITRVQNGFNA 230
Query: 179 RRECNLRKYSYLLPADII------------------------------------------ 196
R+ C+ R Y YLLP +
Sbjct: 231 RQSCDSRMYEYLLPTYVFIPPKPGSTMHDMLLKMRDQELAKDPESTTTCLDEIVSHPFWT 290
Query: 197 --GIQSHFSED--------EIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
G S F+ D ++ S+ + + G H FHN+TV ++R + R
Sbjct: 291 AHGTTSDFATDIAAKKQYRLFATALARIRSIFARYSGSHNFHNFTVGKEFRDRSCQR 347
>E9E8Y4_METAQ (tr|E9E8Y4) tRNA pseudouridine synthase OS=Metarhizium acridum
(strain CQMa 102) GN=MAC_06332 PE=4 SV=1
Length = 592
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A A I +N D K R
Sbjct: 114 KRKVAVMIGYSGTGYKGMQVNGDE---PTIERDLFRAFIDAKAISKANADDPRKSSLARC 170
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN +LP IR++GI + F+
Sbjct: 171 ARTDKGVHAAGNVISLKLII------EDED---IVDKINAHLPEQIRIWGIQRTNNSFNC 221
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YLLP+
Sbjct: 222 YQYCDSRFYEYLLPS 236
>G8JP34_ERECY (tr|G8JP34) Uncharacterized protein OS=Eremothecium cymbalariae
(strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL
Y-17582) GN=Ecym_2190 PE=4 SV=1
Length = 571
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + VGY GT Y G+Q TIE L A KAG I +N DL K + R+
Sbjct: 109 KKKVAVMVGYCGTGYHGMQYNPPN---PTIEAALFDAFVKAGAISKANSTDLKKNGFMRA 165
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I + + +E +IN LP +IRV+ I K FD
Sbjct: 166 ARTDKGVHAGGNVISLKLIIEDSSIRE---------KINDILPPSIRVWSINRVNKAFDS 216
Query: 179 RRECNLRKYSYLLPA-DIIG 197
R+ C+ R Y YLLP +IG
Sbjct: 217 RKLCSSRWYEYLLPTYSLIG 236
>D8U5C8_VOLCA (tr|D8U5C8) Putative uncharacterized protein OS=Volvox carteri
GN=VOLCADRAFT_94649 PE=4 SV=1
Length = 709
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 62 VVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSSRT 121
V GY G Y GLQ Q D T+E+ELE A+ AG ++ + G L KV W R+SRT
Sbjct: 4 VAFVCGYDGAGYFGLQRQPDNTGRPTVEQELERALVAAGALQARHAGALHKVNWSRTSRT 63
Query: 122 DKGVHSLATMISFKMEIPE--------------------DAWKEDRDGVVLANRINIYLP 161
DKGV + A ++S ++IP D L N +N LP
Sbjct: 64 DKGVSAAANVVS--LDIPSGAAAAAAAANAAGGRGNSGGGGGGAAADLTPLVNLVNAALP 121
Query: 162 NTIRVFGILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAF 221
+ ++V+ F+ RR R+Y YL+P + + + E + N +L F
Sbjct: 122 SAVKVWTATRPGPNFEARRAAYGRRYEYLVP--VWALDPSLTPLE----LKRLNLILEVF 175
Query: 222 EGEHPFHNYT 231
G H FHN+T
Sbjct: 176 VGSHCFHNFT 185
>E9F4G5_METAR (tr|E9F4G5) tRNA pseudouridine synthase OS=Metarhizium anisopliae
(strain ARSEF 23 / ATCC MYA-3075) GN=MAA_07164 PE=4 SV=1
Length = 612
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y+G+Q+ DE TIE++L A A I +N D K R
Sbjct: 114 KRKVAVMIGYSGTGYKGMQVNGDE---PTIERDLFRAFIDAKAISKANADDPRKSSLARC 170
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN +LP IR++GI + F+
Sbjct: 171 ARTDKGVHAAGNVISLKLII------EDED---IVEKINAHLPEQIRIWGIQRTNNSFNC 221
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YLLP+
Sbjct: 222 YQYCDSRFYEYLLPS 236
>F7WBX3_SORMK (tr|F7WBX3) WGS project CABT00000000 data, contig 2.88 OS=Sordaria
macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) /
K-hell) GN=SMAC_09382 PE=4 SV=1
Length = 634
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE +L A KAG I +N D K R
Sbjct: 125 KRKVAVLIGYAGTGYHGIQIN---HKEKTIEGDLFAAFVKAGAISKANADDPKKSSLVRC 181
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ A ++S K+ + ED D + +IN +LP+ I+V+GI F
Sbjct: 182 ARTDKGVHAAANVLSLKLIV------EDED---IVEKINSHLPDQIKVWGIQRVTNGFSC 232
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 233 YQACDSRWYEYLMPS 247
>R7UL32_9ANNE (tr|R7UL32) Uncharacterized protein (Fragment) OS=Capitella teleta
GN=CAPTEDRAFT_83969 PE=4 SV=1
Length = 303
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 28/179 (15%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGI-RDSNFGDLDKVKWGR 117
KK V M + Y G Y G+Q +TIE++L A+ KAG + +D K+++ R
Sbjct: 5 KKKVAMFMCYSGKGYFGMQ---RNPGYATIERDLIDALAKAGVVTQDQAESPGPKMQFQR 61
Query: 118 SSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFD 177
++RTDKGV + + S K+ + +IN +LP IR+ GI+P K FD
Sbjct: 62 AARTDKGVSAAGQVCSLKISV---------------FKINEHLPEQIRILGIIPVTKGFD 106
Query: 178 PRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHIS-EFNSLLSAFEGEHPFHNYTVRSK 235
+ CN R Y+Y++P ++ ++ I + N +LS+F G H FHNYT K
Sbjct: 107 SKNSCNGRTYTYMVPT--------YAFTPVEMAIQRQVNIILSSFVGTHNFHNYTSGKK 157
>N4W184_COLOR (tr|N4W184) tRNA pseudouridine synthase OS=Colletotrichum
orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 /
LARS 414 / MAFF 240422) GN=Cob_04399 PE=4 SV=1
Length = 616
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY GT Y+G+QI +E TIE +L A AG I +N D K R
Sbjct: 124 KRKVAVMVGYSGTGYKGMQINNEE---KTIEGDLFKAFVAAGAISKANADDHKKSSLVRC 180
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN LP+ IRV+GI + F
Sbjct: 181 ARTDKGVHAAGNVISLKLII------EDED---IVEKINAALPDQIRVWGIQRTNNAFSC 231
Query: 179 RRECNLRKYSYLLP 192
+ C+ R Y YL+P
Sbjct: 232 YQTCDSRWYEYLMP 245
>E3Q7Q3_COLGM (tr|E3Q7Q3) tRNA pseudouridine synthase A OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_02086 PE=4 SV=1
Length = 614
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY GT Y+G+QI +E TIE +L A AG I +N D K R
Sbjct: 123 KRKVAVMVGYSGTGYKGMQINNEE---KTIEGDLFKAFVAAGAISKANADDHKKSSLVRC 179
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + ++IN LP IRV+GI + F
Sbjct: 180 ARTDKGVHAAGNVISLKLII------EDED---IVDKINANLPEQIRVWGIQRTNNSFSC 230
Query: 179 RRECNLRKYSYLLP 192
+ C+ R Y YLLP
Sbjct: 231 YQTCDSRWYEYLLP 244
>G2QGQ1_THIHA (tr|G2QGQ1) Uncharacterized protein OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2306070 PE=4 SV=1
Length = 627
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE ++ A AG I +N D K R
Sbjct: 108 KRKVAVMIGYAGTGYHGIQIN---HKDKTIEGDIFAAFVAAGAISKANADDPKKSSLVRC 164
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D + ++IN +LP+ IRV+GI + F
Sbjct: 165 ARTDKGVHAAGNVLSLKLIV------EDED---IVDKINAHLPDQIRVWGIQRTSNGFSC 215
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 216 YQACDSRWYEYLMPS 230
>C5L6H0_PERM5 (tr|C5L6H0) Pseudouridylate synthase, putative OS=Perkinsus marinus
(strain ATCC 50983 / TXsc) GN=Pmar_PMAR024035 PE=4 SV=1
Length = 708
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDE-HRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGR 117
K+ + VG+ GT YRGLQ+ D R+ +E +L A+ +AG ++ + LD+++W R
Sbjct: 23 KRKCALVVGFNGTKYRGLQMNADNCDRIDYVESDLLGAMKRAGVVK-PDVVRLDEIQWTR 81
Query: 118 SSRTDKGVHSLATMISFKM---EIPE-----DAWKEDRDGVVLANRINIYLPNTIRVFGI 169
SSRTD GV + ++S K+ E PE A + +R + IN LP I+VF
Sbjct: 82 SSRTDAGVSAARIVVSAKILVHEAPEVKGNRQADRVNRTYPEVVEAINKELPREIKVFNC 141
Query: 170 LPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHN 229
+ F+ ++ CN R YSY +P + G + + L F H +HN
Sbjct: 142 MKICASFNAQKSCNWRHYSYYMPMSLAG------------DVDKLQEALGKFTNAHNYHN 189
Query: 230 YT 231
+T
Sbjct: 190 FT 191
>G2R961_THITE (tr|G2R961) Putative uncharacterized protein OS=Thielavia
terrestris (strain ATCC 38088 / NRRL 8126)
GN=THITE_2118253 PE=4 SV=1
Length = 569
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE ++ A AG I +N D K R
Sbjct: 71 KRKVAVLIGYAGTGYHGIQIN---HKEKTIEGDIFAAFVAAGAISKANADDPKKSSLVRC 127
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D V +RIN +LP IRV+GI + F
Sbjct: 128 ARTDKGVHAAGNVLSLKLIV------EDEDVV---DRINQHLPEQIRVWGIQRTNNGFSC 178
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 179 YQACDSRWYEYLMPS 193
>D8SNZ9_SELML (tr|D8SNZ9) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_44317 PE=3 SV=1
Length = 363
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 60 KTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSS 119
+ + + V Y G Y+G+Q + TIE +LE A++KAG I +S FGD K+ W R++
Sbjct: 1 RKIAIFVSYSGYGYQGMQRNKG---CKTIEGDLEEALFKAGAIAESTFGDPRKIDWARAA 57
Query: 120 RTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPR 179
RTDKGV + ++S + + D G V R+N +LP IRV G F +
Sbjct: 58 RTDKGVSAAGQVVSGRFFV-------DPPGFV--ERVNSHLPKQIRVLGFTRVTGTFSAK 108
Query: 180 RECNLRKYSYLLPADIIGIQSH 201
C+ R+Y Y+LP + SH
Sbjct: 109 NLCDRRRYEYVLPVFALDPASH 130
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 328 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 387
R I+ G++ + G +V + G SFMLHQIRKM+G AVAV R P I + +
Sbjct: 224 RYITSYEAGEVFTIQGCKFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRR 283
Query: 388 FTRIVLPLAPPEVLILRGNTFSMRSS--AGKFIRPEMVSLVESEPILNEVEEFYTSVMLP 445
T+I +P+AP L L ++ + AG E VSL E E+ EF T V+ P
Sbjct: 284 DTKIGVPMAPELGLFLDECLYTAYNQRFAGSH---EEVSLKSFE---KEIAEFKTEVIYP 337
Query: 446 ELSKFLDSSKSPWVEWVERLDK 467
++ ++ + W+ L K
Sbjct: 338 HIAS-TEAKDGVFARWLHGLTK 358
>E9GZJ2_DAPPU (tr|E9GZJ2) tRNA pseudouridine synthase (Fragment) OS=Daphnia pulex
GN=DAPPUDRAFT_12957 PE=3 SV=1
Length = 319
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK + + Y G +Y G+Q H T+E EL A K + D +F V + R+
Sbjct: 2 KKKFAILLSYSGQNYLGMQFN---HGFKTVEGELFQAFMKLEIMDDESFKSPQTVHFQRA 58
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV ++ +IS K+ P+ ED L N++N LPN I+VF + F+
Sbjct: 59 ARTDKGVSAVRQVISLKIRTPD----ED-----LVNQLNSLLPNCIKVFAMRKVTGGFNS 109
Query: 179 RRECNLRKYSYLLPA------DIIGIQSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYT 231
+ C+ R YSY++P ++ + +I + E NSLLS F+G +HN+T
Sbjct: 110 KIACDSRSYSYVMPTFAFTSKEVAPTHGYRVTSKI---LDEVNSLLSVFKGTRNYHNFT 165
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 328 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 387
R I+Q SCG + ++V+I I G SFMLHQIRKM+G ++V R +PR+IL + K
Sbjct: 177 RYITQFSCGDPFMIKEVEFVKITIKGQSFMLHQIRKMIGLTISVMRGFVPREILDKAF-K 235
Query: 388 FTRIVLPLAPPEVLIL 403
R+ +P AP L+L
Sbjct: 236 MERVNVPTAPSLNLLL 251
>B8NBS8_ASPFN (tr|B8NBS8) tRNA pseudouridine synthase, putative OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=AFLA_046530 PE=4 SV=1
Length = 601
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY GT Y+G+Q+ E TIE +L A AG I +N D K R
Sbjct: 116 KKKVAVLLGYSGTGYKGMQLSATE---KTIEGDLFAAFVAAGAISKANAADPKKSSLVRC 172
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D + +IN +L IRV+GIL + K F
Sbjct: 173 ARTDKGVHAAGNVVSLKLIV------EDED---IVQKINAHLSPQIRVWGILVASKSFSS 223
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 224 YQMCDSRIYEYLMPS 238
>D8SSE2_SELML (tr|D8SSE2) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_44320 PE=3 SV=1
Length = 363
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 60 KTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRSS 119
+ + + V Y G Y+G+Q + TIE +LE A++KAG I +S FGD K+ W R++
Sbjct: 1 RKIAIFVSYSGYGYQGMQRNKG---CKTIEGDLEEALFKAGAIAESTFGDPRKIDWARAA 57
Query: 120 RTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDPR 179
RTDKGV + ++S + + D G V R+N +LP IRV G F +
Sbjct: 58 RTDKGVSAAGQVVSGRFFV-------DPPGFV--ERVNSHLPKQIRVLGFTRVTGTFSAK 108
Query: 180 RECNLRKYSYLLPADIIGIQSH 201
C+ R+Y Y+LP + SH
Sbjct: 109 NLCDRRRYEYVLPVFALDPASH 130
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 328 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 387
R I+ G++ + G +V + G SFMLHQIRKM+G AVAV R P I + +
Sbjct: 224 RYITSYEAGEVFTIQGCKFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRR 283
Query: 388 FTRIVLPLAPPEVLILRGNTFSMRSS--AGKFIRPEMVSLVESEPILNEVEEFYTSVMLP 445
T+I +P+AP L L ++ + AG E VSL E E+ EF T V+ P
Sbjct: 284 DTKIGVPMAPELGLFLDECLYTAYNQRFAGSH---EEVSLKSFE---KEIAEFKTEVIYP 337
Query: 446 ELSKFLDSSKSPWVEWVERLDK 467
++ ++ + W+ L K
Sbjct: 338 HIAS-TEAKDGVFARWLHGLTK 358
>F6Y8V2_XENTR (tr|F6Y8V2) tRNA pseudouridine synthase (Fragment) OS=Xenopus
tropicalis GN=LOC100490752 PE=3 SV=1
Length = 321
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ + + Y G Y G+Q+ TIE L +A+ +A I + + + ++K+ R
Sbjct: 4 KRKFAIMLAYCGRGYYGMQMDLTRPNFPTIESALISALIQARCIPEMFYMQMKQLKFQRC 63
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGV +L+ ++S ++ +P + +IN +LP I + + K F P
Sbjct: 64 ARTDKGVSALSQLVSVRL-LPSCSNP--------VEKINSHLPPEILIIDMKRVTKGFCP 114
Query: 179 RRECNLRKYSYLLPADIIGI------QSHFSEDEIDFHISEFNSLLSAFEGEHPFHNYTV 232
++ C+ R YSY++P + S+F DFH N+LLS ++G H FHN+T
Sbjct: 115 KKMCDKRSYSYMVPTFALSCCAPSVPDSNFRMPREDFH--NINNLLSFYKGTHNFHNFTS 172
Query: 233 RSKY 236
R +
Sbjct: 173 RKAF 176
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 325 SHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLS 384
S FR + SC + G ++ +I I G SFML+QIRKMVG +A+ + ++P D L
Sbjct: 180 SSFRHMLDVSCSEPFVFHGTEFAQIHITGQSFMLYQIRKMVGLIIAIAQGIVPADFLPQC 239
Query: 385 LIKFTRIVLPLAPPEVLILRGNTF---SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTS 441
+ + +I +P AP L+L F + R F +P +S +S P V F+
Sbjct: 240 MQR-EKINIPPAPGLGLVLERVHFDWYNKRYGGDGFHQP--ISWEKSMP---TVSVFWEE 293
Query: 442 VMLPEL--SKFLDSSKSPWVEWVER 464
+LP++ + + S S W+E + R
Sbjct: 294 RILPDILEGELENLSMSYWIEKLNR 318
>A7ASP1_BABBO (tr|A7ASP1) tRNA pseudouridine synthase OS=Babesia bovis
GN=BBOV_IV012080 PE=3 SV=1
Length = 414
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 47/235 (20%)
Query: 54 WEPFLKKTVVMRVGYVGTDYRGLQIQRD--EHRLSTIEKELETAIYKAGGIRDSNFGDLD 111
W + ++ + Y+GT+Y G QIQRD + + T+E + A+ I S+ +L
Sbjct: 21 WVCLVFMLSIIVLSYIGTNYHGFQIQRDAGDDGIDTVEARVINALVTTDAIHGSHKNNLG 80
Query: 112 KVKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGV----VLANRINIYLPNTIRVF 167
K++ ++SRTDKGVH+ T I + E+ + E G+ L +R+N LP+ IR F
Sbjct: 81 KLQLSKASRTDKGVHAACTYIGGRFELSHLSAGE--PGISKEQCLVSRLNTVLPDDIRCF 138
Query: 168 GILPSKKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDE-----------IDFHISE--- 213
+L + F R C+ R Y Y++P ++ + ED+ ++ H++
Sbjct: 139 QVLRVTRGFCARSMCSKRMYEYVIPLSLLRYRYVCGEDDNKRTFEKTSNLMNLHMNSRQN 198
Query: 214 -------------------------FNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
S+LS + G H F N+T R K +K R
Sbjct: 199 IHCKRLSSVALHEGTTEERDVDMVLLQSILSDYCGSHDFKNFTQRQKVEEKTTQR 253
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 342 LGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVL 401
+G + V + I G SF+ +QIRKM+G AV + PR + +L K+ + PLAP E L
Sbjct: 266 IGINAVRVIITGQSFLYNQIRKMIGLGYAVYLGVAPRCAIKFALSKWHAVNTPLAPAEGL 325
Query: 402 ILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEW 461
L F + + P +E + I + VE F + + PE++ ++ W W
Sbjct: 326 FLHHPYF---DAYNRRCSPPQTPFIEYDDIESSVENFKRTRIYPEIASTFET--DVWKTW 380
Query: 462 VERL 465
+E+L
Sbjct: 381 MEKL 384
>M7U0L3_9PEZI (tr|M7U0L3) Putative trna pseudouridine synthase a protein
OS=Eutypa lata UCREL1 GN=UCREL1_488 PE=4 SV=1
Length = 646
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y GLQI H+ TIE ++ A+ A I +N D K + R
Sbjct: 107 KRKVAVLIGYSGTGYHGLQIN---HKDKTIEGDIFAALVAANSISKANASDPRKSSFVRC 163
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ MIS K+ I ED D + +IN LP+ IRV+GI + F
Sbjct: 164 ARTDKGVHAAGNMISLKLII------EDPD---IVKKINDALPSQIRVWGIHRTNNAFSC 214
Query: 179 RRECNLRKYSYLLPA 193
++C+ R Y YL+P+
Sbjct: 215 YQQCDSRWYEYLMPS 229
>L2FXK4_COLGN (tr|L2FXK4) tRNA pseudouridine synthase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_919 PE=3 SV=1
Length = 473
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + VGY GT Y+G+QI +E TIE +L A AG I +N D K R
Sbjct: 99 KRKVAVMVGYSGTGYKGMQINNEE---KTIEGDLFKAFVAAGAISKANADDHKKSSLVRC 155
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I ED D + +IN LP IRV+GI + F
Sbjct: 156 ARTDKGVHAAGNVISLKLII------EDED---VVEKINAALPEQIRVWGIQRTNNSFSC 206
Query: 179 RRECNLRKYSYLLP 192
+ C+ R Y YL+P
Sbjct: 207 YQTCDSRWYEYLMP 220
>B0CU40_LACBS (tr|B0CU40) Predicted protein OS=Laccaria bicolor (strain S238N-H82
/ ATCC MYA-4686) GN=LACBIDRAFT_243960 PE=4 SV=1
Length = 525
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 57 FLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWG 116
+ K+ + VG+ G+ Y G+Q+ TIE L A+ K G + N D KV
Sbjct: 95 YPKRQCALLVGFCGSGYSGMQMY---GHTRTIEGALFGALVKVGAVSQDNADDPVKVALA 151
Query: 117 RSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRF 176
R++RTD GVH+ ++S KM I K+ L RIN LP IR++G + ++ F
Sbjct: 152 RAARTDAGVHAAGNLVSLKMIITVPGIKD------LVARINEELPPEIRLWGYVRTQNSF 205
Query: 177 DPRRECNLRKYSYLLPADII-------------------------GIQSHFSED------ 205
+ R C+ RKY+Y P ++ I F +D
Sbjct: 206 NARLVCDSRKYTYFFPTYLMIPPKPGTGLHRVLQLPSQPHSFWEGAISDSFQDDLRRKRC 265
Query: 206 --EIDFHISEFNSLLSAFEGEHPFHNYTVRSKYRKKHHAR 243
+ + L +EG H FHN+TV +++++ + R
Sbjct: 266 WRTGQEQVQKLRELAKGYEGTHNFHNFTVGREFKERSNHR 305
>G0S3J9_CHATD (tr|G0S3J9) Putative uncharacterized protein OS=Chaetomium
thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0021520 PE=4 SV=1
Length = 658
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+QI H+ TIE +L A KAG I N D K R
Sbjct: 127 KRKVAVLIGYAGTGYHGIQIN---HKERTIEGDLFAAFVKAGAISKVNADDPKKSSLVRC 183
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D + +IN +LP+ IRV+GI + F
Sbjct: 184 ARTDKGVHAAGNVLSLKLIV------EDPD---IVEKINSHLPDQIRVWGIQRTSNGFSC 234
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 235 YQACDSRWYEYLMPS 249
>H0GPC1_9SACH (tr|H0GPC1) Pus1p OS=Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7 GN=VIN7_4838 PE=4 SV=1
Length = 544
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 55 EPFL-KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
EP L K+ V + VGY GT Y G+Q TIE L A +AG I N DL K
Sbjct: 69 EPRLPKRKVAVMVGYCGTGYHGMQYNPPN---PTIESALFKAFVEAGAISKDNSNDLKKN 125
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
+ R++RTDKGVH+ +IS KM I ED D + +IN LP IRV+ I
Sbjct: 126 GFMRAARTDKGVHAGGNLISLKMII------EDPD---IKQKINEKLPEGIRVWDIERVN 176
Query: 174 KRFDPRRECNLRKYSYLLPA-DIIG 197
K FD R+ C+ R Y YLLP +IG
Sbjct: 177 KAFDCRKMCSSRWYEYLLPTYSLIG 201
>Q2TZH0_ASPOR (tr|Q2TZH0) Pseudouridylate synthase OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=AO090011000855 PE=4 SV=1
Length = 563
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
KK V + +GY GT Y+G+Q+ E TIE +L A AG I +N D K R
Sbjct: 78 KKKVAVLLGYSGTGYKGMQLSATE---KTIEGDLFAAFVAAGAISKANAADPKKSSLVRC 134
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ ++S K+ + ED D + +IN +L IRV+GIL + K F
Sbjct: 135 ARTDKGVHAAGNVVSLKLIV------EDED---IVQKINAHLSPQIRVWGILVASKSFSS 185
Query: 179 RRECNLRKYSYLLPA 193
+ C+ R Y YL+P+
Sbjct: 186 YQMCDSRIYEYLMPS 200
>C5E4L6_ZYGRC (tr|C5E4L6) ZYRO0E07106p OS=Zygosaccharomyces rouxii (strain ATCC
2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=ZYRO0E07106g PE=4 SV=1
Length = 537
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 59 KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKVKWGRS 118
K+ V + +GY GT Y G+Q + L TIE EL TA +AG I +N DL K + R+
Sbjct: 74 KRKVAVMIGYCGTGYHGMQ--HNPPNL-TIESELFTAFVEAGAISKANSTDLKKNGFMRA 130
Query: 119 SRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSKKRFDP 178
+RTDKGVH+ +IS K+ I + KE +IN LP IRV+ I K FD
Sbjct: 131 ARTDKGVHAGGNLISLKLIIEDPQIKE---------KINEKLPEGIRVWDIKRVNKAFDC 181
Query: 179 RRECNLRKYSYLLPA-DIIG 197
R+ C+ R Y YLLP +IG
Sbjct: 182 RKMCSSRWYEYLLPTYSLIG 201
>H3I1T3_STRPU (tr|H3I1T3) tRNA pseudouridine synthase OS=Strongylocentrotus
purpuratus PE=3 SV=1
Length = 373
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 53 KWEPFLKKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDK 112
K LK+ V + + Y G +Y G+Q + TIE++L A+ K+G I + +++K
Sbjct: 64 KRSKLLKRKVAILLSYAGANYVGMQRNPG---VQTIEEDLVNALVKSGAIPEDCGRNMNK 120
Query: 113 VKWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPS 172
+ + R +RTDKGV + ++S K+ + ++ L RIN +LP IRV G+ +
Sbjct: 121 MSFQRCARTDKGVSAAGQVVSLKVLMLDN----------LMERINEHLPPVIRVMGVTRT 170
Query: 173 KKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEI---DFHISEFNSLLSAFEGEHPFHN 229
F+ + C R Y YL+P F+ ++ D I E L + G H FHN
Sbjct: 171 TGGFNCKNNCEFRTYMYLIPTFAFTPLEDFTLEKYRVSDEKIEEVGEQLKKYIGTHNFHN 230
Query: 230 YT 231
+T
Sbjct: 231 FT 232
>N1NWM6_YEASX (tr|N1NWM6) Pus1p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_1913 PE=4 SV=1
Length = 544
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 55 EPFL-KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
EP L K+ V + VGY GT Y G+Q TIE L A +AG I N DL K
Sbjct: 69 EPRLPKRKVAVMVGYCGTGYHGMQYNPPN---PTIESALFKAFVEAGAISKDNSNDLKKN 125
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
+ R++RTDKGVH+ +IS KM I ED D + +IN LP IRV+ I
Sbjct: 126 GFMRAARTDKGVHAGGNLISLKMII------EDPD---IKQKINEKLPEGIRVWDIERVN 176
Query: 174 KRFDPRRECNLRKYSYLLPA-DIIG 197
K FD R+ C+ R Y YLLP +IG
Sbjct: 177 KAFDCRKMCSSRWYEYLLPTYSLIG 201
>C8ZIG7_YEAS8 (tr|C8ZIG7) Pus1p OS=Saccharomyces cerevisiae (strain Lalvin EC1118
/ Prise de mousse) GN=EC1118_1P2_0705g PE=4 SV=1
Length = 544
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 55 EPFL-KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
EP L K+ V + VGY GT Y G+Q TIE L A +AG I N DL K
Sbjct: 69 EPRLPKRKVAVMVGYCGTGYHGMQYNPPN---PTIESALFKAFVEAGAISKDNSNDLKKN 125
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
+ R++RTDKGVH+ +IS KM I ED D + +IN LP IRV+ I
Sbjct: 126 GFMRAARTDKGVHAGGNLISLKMII------EDPD---IKQKINEKLPEGIRVWDIERVN 176
Query: 174 KRFDPRRECNLRKYSYLLPA-DIIG 197
K FD R+ C+ R Y YLLP +IG
Sbjct: 177 KAFDCRKMCSSRWYEYLLPTYSLIG 201
>B3LKL8_YEAS1 (tr|B3LKL8) tRNA pseudouridine synthase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_02287 PE=4 SV=1
Length = 544
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 55 EPFL-KKTVVMRVGYVGTDYRGLQIQRDEHRLSTIEKELETAIYKAGGIRDSNFGDLDKV 113
EP L K+ V + VGY GT Y G+Q TIE L A +AG I N DL K
Sbjct: 69 EPRLPKRKVAVMVGYCGTGYHGMQYNPPN---PTIESALFKAFVEAGAISKDNSNDLKKN 125
Query: 114 KWGRSSRTDKGVHSLATMISFKMEIPEDAWKEDRDGVVLANRINIYLPNTIRVFGILPSK 173
+ R++RTDKGVH+ +IS KM I ED D + +IN LP IRV+ I
Sbjct: 126 GFMRAARTDKGVHAGGNLISLKMII------EDPD---IKQKINEKLPEGIRVWDIERVN 176
Query: 174 KRFDPRRECNLRKYSYLLPA-DIIG 197
K FD R+ C+ R Y YLLP +IG
Sbjct: 177 KAFDCRKMCSSRWYEYLLPTYSLIG 201