Miyakogusa Predicted Gene

Lj2g3v2245120.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2245120.1 Non Chatacterized Hit- tr|C6TEU0|C6TEU0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,66.98,9e-33,seg,NULL,CUFF.38756.1
         (136 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6TEU0_SOYBN (tr|C6TEU0) Putative uncharacterized protein OS=Gly...   127   1e-27

>C6TEU0_SOYBN (tr|C6TEU0) Putative uncharacterized protein OS=Glycine max PE=4
           SV=1
          Length = 118

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 74/106 (69%)

Query: 13  SRMFLIHDKQNLPTMSNSKIQEFPYFLLITESFRSSKVTIQVIPNPINLPQCDPMPTFPN 72
           SR+FLIHD QNLPTM    IQE P F+ I +  R SKVT+QVIPNPINLPQC+P+PT P+
Sbjct: 13  SRLFLIHDNQNLPTMHQCGIQELPNFICIKKGLRGSKVTVQVIPNPINLPQCNPVPTSPD 72

Query: 73  PSKPSHQNIDHNPHQXXXXXXXXXXXXPVSTIMPNHTLPFLFQSRN 118
           PSKP   +IDHNPHQ            P+S IMP +TL  LFQSRN
Sbjct: 73  PSKPFQCHIDHNPHQNILRCININGRCPLSMIMPQYTLSLLFQSRN 118