Miyakogusa Predicted Gene
- Lj2g3v1203430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1203430.1 tr|F6HGF2|F6HGF2_VITVI DNA-directed RNA
polymerase OS=Vitis vinifera GN=VIT_01s0010g00690 PE=3
SV=1,69.58,0,RNA_pol,DNA-directed RNA polymerase, phage-type;
seg,NULL; DNA/RNA polymerases,NULL; no description,,CUFF.36494.1
(990 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vi... 1345 0.0
M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persi... 1342 0.0
B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus ... 1315 0.0
B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus ... 1314 0.0
B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus ... 1306 0.0
K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum ... 1281 0.0
D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vi... 1271 0.0
B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sa... 1255 0.0
Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sa... 1254 0.0
J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza br... 1254 0.0
I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza gl... 1253 0.0
C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum ... 1245 0.0
K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria ... 1241 0.0
P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopod... 1239 0.0
M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persi... 1238 0.0
I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypo... 1231 0.0
Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum... 1229 0.0
E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar a... 1227 0.0
Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) ... 1224 0.0
E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar a... 1223 0.0
K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine ... 1220 0.0
M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acu... 1217 0.0
Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays... 1217 0.0
F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidop... 1216 0.0
M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica... 1215 0.0
D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidop... 1209 0.0
R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rub... 1204 0.0
K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine ... 1200 0.0
M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica... 1195 0.0
B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus ... 1193 0.0
Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia... 1184 0.0
R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rub... 1181 0.0
D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidop... 1176 0.0
B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica... 1166 0.0
E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar a... 1159 0.0
K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max ... 1152 0.0
F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidop... 1149 0.0
Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cle... 1129 0.0
Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sa... 1122 0.0
G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago... 1118 0.0
F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vi... 1114 0.0
M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persi... 1108 0.0
B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus ... 1103 0.0
B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus ... 1090 0.0
R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rub... 1088 0.0
K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum ... 1085 0.0
D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidop... 1085 0.0
Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidop... 1085 0.0
M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica... 1085 0.0
K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine ... 1073 0.0
M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acu... 1072 0.0
M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica... 1066 0.0
Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia... 1063 0.0
I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine ... 1044 0.0
K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine ... 1039 0.0
I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypo... 1034 0.0
A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sa... 1030 0.0
B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sa... 1029 0.0
Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sa... 1028 0.0
K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum ... 1026 0.0
I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza gl... 1026 0.0
Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum... 1019 0.0
K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria ... 1018 0.0
J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) ... 1016 0.0
Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum ... 1014 0.0
Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum ... 1011 0.0
M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rap... 1008 0.0
C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum ... 1003 0.0
Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays... 1000 0.0
O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays... 999 0.0
Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sa... 994 0.0
M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2, chloropl... 989 0.0
Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomi... 982 0.0
Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomi... 982 0.0
I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypo... 980 0.0
A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomi... 977 0.0
A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sa... 975 0.0
B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chlorop... 947 0.0
B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus ... 944 0.0
M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2, chloropl... 935 0.0
Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomi... 933 0.0
A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomi... 932 0.0
Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomi... 932 0.0
K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine ... 927 0.0
K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max ... 902 0.0
B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor)... 889 0.0
F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidop... 889 0.0
D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) ... 888 0.0
G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago... 883 0.0
N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcom... 880 0.0
A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomi... 876 0.0
N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloropl... 872 0.0
K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max ... 862 0.0
K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max ... 862 0.0
B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus ... 860 0.0
M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloropl... 845 0.0
M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tube... 827 0.0
M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulg... 817 0.0
B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus... 801 0.0
I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine ... 779 0.0
Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) ... 756 0.0
M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum ... 750 0.0
D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleri... 631 e-178
K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoc... 604 e-170
A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreoco... 603 e-169
Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleri... 600 e-168
L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acantham... 595 e-167
C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromon... 594 e-167
Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreoco... 586 e-164
Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment) ... 583 e-164
D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polyspho... 576 e-161
C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromon... 573 e-160
Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum... 572 e-160
F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyost... 570 e-159
F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyost... 565 e-158
F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococ... 553 e-154
I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus... 550 e-154
M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosp... 550 e-153
G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotor... 546 e-152
B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays... 546 e-152
E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorell... 545 e-152
K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ... 545 e-152
Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) ... 543 e-151
A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) ... 541 e-151
F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo l... 539 e-150
Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) ... 539 e-150
Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoe... 538 e-150
R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squale... 537 e-150
D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocy... 535 e-149
I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyx... 533 e-148
Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyost... 533 e-148
M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis... 531 e-148
L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillard... 530 e-147
D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytopht... 529 e-147
M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidio... 528 e-147
H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytopht... 527 e-147
M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed ... 525 e-146
A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, w... 521 e-145
K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phaneroc... 521 e-145
R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma h... 519 e-144
D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarp... 518 e-144
J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibropor... 518 e-144
M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassez... 516 e-143
B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodac... 515 e-143
Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptoco... 514 e-143
E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisor... 514 e-142
B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodac... 513 e-142
F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptoco... 513 e-142
Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago... 513 e-142
F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptoco... 513 e-142
Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptoco... 513 e-142
G9HRK4_9SPIT (tr|G9HRK4) DNA-dependent RNA polymerase family pro... 513 e-142
J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosp... 512 e-142
Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptoco... 512 e-142
F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptoco... 512 e-142
D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizoph... 511 e-142
Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptoco... 511 e-142
Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptoco... 511 e-142
F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptoco... 511 e-142
Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptoco... 511 e-142
K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosp... 511 e-142
Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptoco... 511 e-142
G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia os... 511 e-142
Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptoco... 509 e-141
I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago... 509 e-141
J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptoco... 509 e-141
H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharo... 509 e-141
B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosa... 508 e-141
R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ich... 508 e-141
Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptoco... 508 e-141
E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptoco... 508 e-141
F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula ... 507 e-141
F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula ... 506 e-140
C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharo... 506 e-140
B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharo... 506 e-140
C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharo... 506 e-140
A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharo... 506 e-140
N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.... 506 e-140
G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharo... 506 e-140
H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharo... 505 e-140
I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia... 505 e-140
D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber me... 504 e-140
A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassez... 503 e-139
Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family pro... 503 e-139
C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachance... 502 e-139
G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ich... 501 e-139
L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizocto... 501 e-139
N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeri... 500 e-138
G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobo... 500 e-138
D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniell... 499 e-138
G3SPD8_LOXAF (tr|G3SPD8) DNA-directed RNA polymerase (Fragment) ... 499 e-138
F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis fa... 499 e-138
J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidio... 499 e-138
E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidio... 498 e-138
C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidio... 498 e-138
M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (... 498 e-138
G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomi... 497 e-137
B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) ... 497 e-137
J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharo... 496 e-137
F4S3X3_MELLP (tr|F4S3X3) DNA-directed RNA polymerase OS=Melampso... 496 e-137
H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachst... 496 e-137
D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus nor... 495 e-137
M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna... 494 e-137
G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryoti... 494 e-137
M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieri... 493 e-136
G3XYH4_ASPNA (tr|G3XYH4) DNA-directed RNA polymerase OS=Aspergil... 493 e-136
A2R5W5_ASPNC (tr|A2R5W5) DNA-directed RNA polymerase OS=Aspergil... 493 e-136
G7XU63_ASPKW (tr|G7XU63) DNA-directed RNA polymerase OS=Aspergil... 493 e-136
M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceripori... 493 e-136
B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassi... 492 e-136
G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida ... 492 e-136
L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) ... 491 e-136
A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Scleroti... 490 e-136
Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor)... 490 e-135
Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyvero... 490 e-135
Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida ... 490 e-135
L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces... 489 e-135
F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelp... 489 e-135
C3Y2C4_BRAFL (tr|C3Y2C4) DNA-directed RNA polymerase OS=Branchio... 489 e-135
H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) ... 489 e-135
F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus ... 488 e-135
Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericel... 488 e-135
M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna... 488 e-135
M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphopho... 487 e-135
M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela ... 487 e-134
Q3V3C0_MOUSE (tr|Q3V3C0) DNA-directed RNA polymerase (Fragment) ... 487 e-134
K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus... 487 e-134
I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapis... 487 e-134
K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus... 486 e-134
G4Z814_PHYSP (tr|G4Z814) DNA-directed RNA polymerase OS=Phytopht... 486 e-134
C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagata... 486 e-134
Q3U3J3_MOUSE (tr|Q3U3J3) DNA-directed RNA polymerase OS=Mus musc... 486 e-134
F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagata... 486 e-134
G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavi... 486 e-134
H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur... 485 e-134
C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthrode... 485 e-134
G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia s... 485 e-134
L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis d... 485 e-134
L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletot... 485 e-134
G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis l... 484 e-134
G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavi... 484 e-134
J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis fa... 484 e-134
G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulasp... 484 e-133
K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus... 484 e-133
K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssoni... 483 e-133
G1L7Q8_AILME (tr|G1L7Q8) DNA-directed RNA polymerase OS=Ailuropo... 483 e-133
G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovoz... 483 e-133
K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerha... 482 e-133
I3M2A6_SPETR (tr|I3M2A6) DNA-directed RNA polymerase OS=Spermoph... 481 e-133
M3V845_PIG (tr|M3V845) DNA-directed RNA polymerase OS=Sus scrofa... 481 e-133
I3J2B8_ORENI (tr|I3J2B8) DNA-directed RNA polymerase (Fragment) ... 481 e-133
G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapis... 481 e-133
C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinoca... 481 e-133
G0VD01_NAUCC (tr|G0VD01) DNA-directed RNA polymerase OS=Naumovoz... 481 e-133
H2VAF6_TAKRU (tr|H2VAF6) DNA-directed RNA polymerase (Fragment) ... 481 e-133
Q4WZV7_ASPFU (tr|Q4WZV7) DNA-directed RNA polymerase OS=Neosarto... 480 e-132
D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichoph... 480 e-132
B0XUL0_ASPFC (tr|B0XUL0) DNA-directed RNA polymerase OS=Neosarto... 480 e-132
A1DIB9_NEOFI (tr|A1DIB9) DNA-directed RNA polymerase OS=Neosarto... 479 e-132
J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachst... 479 e-132
Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya g... 479 e-132
M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=F... 479 e-132
H2VAF7_TAKRU (tr|H2VAF7) DNA-directed RNA polymerase (Fragment) ... 479 e-132
K6ZBI1_PANTR (tr|K6ZBI1) DNA-directed RNA polymerase OS=Pan trog... 479 e-132
G1QJ40_NOMLE (tr|G1QJ40) DNA-directed RNA polymerase OS=Nomascus... 479 e-132
F2RVR6_TRIT1 (tr|F2RVR6) DNA-directed RNA polymerase OS=Trichoph... 479 e-132
E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletot... 479 e-132
F2Q2T9_TRIEC (tr|F2Q2T9) DNA-directed RNA polymerase OS=Trichoph... 479 e-132
D4B1W3_ARTBC (tr|D4B1W3) DNA-directed RNA polymerase OS=Arthrode... 479 e-132
Q4G0F4_HUMAN (tr|Q4G0F4) DNA-directed RNA polymerase OS=Homo sap... 479 e-132
Q59E91_HUMAN (tr|Q59E91) DNA-directed RNA polymerase (Fragment) ... 478 e-132
R7YGD8_9EURO (tr|R7YGD8) Uncharacterized protein OS=Coniosporium... 478 e-132
N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletot... 478 e-132
E1BZ13_CHICK (tr|E1BZ13) DNA-directed RNA polymerase OS=Gallus g... 478 e-132
Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomi... 478 e-132
I2CX83_MACMU (tr|I2CX83) DNA-directed RNA polymerase OS=Macaca m... 478 e-132
F2SGD5_TRIRC (tr|F2SGD5) DNA-directed RNA polymerase OS=Trichoph... 478 e-132
H2VAF8_TAKRU (tr|H2VAF8) DNA-directed RNA polymerase (Fragment) ... 478 e-132
K7EKS3_HUMAN (tr|K7EKS3) DNA-directed RNA polymerase OS=Homo sap... 477 e-132
E4UVQ3_ARTGP (tr|E4UVQ3) DNA-directed RNA polymerase OS=Arthrode... 477 e-132
G5C5W3_HETGA (tr|G5C5W3) DNA-directed RNA polymerase OS=Heteroce... 477 e-131
H3ATV4_LATCH (tr|H3ATV4) DNA-directed RNA polymerase (Fragment) ... 477 e-131
E9PWD9_MOUSE (tr|E9PWD9) DNA-directed RNA polymerase OS=Mus musc... 477 e-131
F1Q5F7_DANRE (tr|F1Q5F7) DNA-directed RNA polymerase OS=Danio re... 477 e-131
G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticil... 476 e-131
B6HKC8_PENCW (tr|B6HKC8) DNA-directed RNA polymerase OS=Penicill... 476 e-131
G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospo... 475 e-131
F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospo... 475 e-131
H3CZ72_TETNG (tr|H3CZ72) DNA-directed RNA polymerase (Fragment) ... 475 e-131
B8MRF0_TALSN (tr|B8MRF0) DNA-directed RNA polymerase OS=Talaromy... 475 e-131
E7R4S0_PICAD (tr|E7R4S0) DNA-directed RNA polymerase OS=Pichia a... 475 e-131
A9V1Q0_MONBE (tr|A9V1Q0) DNA-directed RNA polymerase OS=Monosiga... 474 e-131
G1MW79_MELGA (tr|G1MW79) DNA-directed RNA polymerase (Fragment) ... 474 e-131
G4TLX8_PIRID (tr|G4TLX8) Related to RPO41-DNA-directed RNA polym... 474 e-131
H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletot... 474 e-131
H2VAF5_TAKRU (tr|H2VAF5) DNA-directed RNA polymerase (Fragment) ... 474 e-130
A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffer... 473 e-130
D2HMC2_AILME (tr|D2HMC2) DNA-directed RNA polymerase (Fragment) ... 473 e-130
C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosacc... 473 e-130
E1BCZ0_BOVIN (tr|E1BCZ0) DNA-directed RNA polymerase OS=Bos taur... 472 e-130
Q0CV53_ASPTN (tr|Q0CV53) DNA-directed RNA polymerase OS=Aspergil... 472 e-130
F2U5G9_SALS5 (tr|F2U5G9) DNA-directed RNA polymerase OS=Salpingo... 472 e-130
G8JMS2_ERECY (tr|G8JMS2) DNA-directed RNA polymerase OS=Eremothe... 472 e-130
E9EDA9_METAQ (tr|E9EDA9) DNA-directed RNA polymerase OS=Metarhiz... 472 e-130
H2VAF9_TAKRU (tr|H2VAF9) DNA-directed RNA polymerase (Fragment) ... 471 e-130
R4XD37_9ASCO (tr|R4XD37) DNA-directed RNA polymerase OS=Taphrina... 471 e-130
Q2UD92_ASPOR (tr|Q2UD92) DNA-directed RNA polymerase OS=Aspergil... 471 e-130
I8TNX0_ASPO3 (tr|I8TNX0) DNA-directed RNA polymerase OS=Aspergil... 471 e-130
B8N6M7_ASPFN (tr|B8N6M7) DNA-directed RNA polymerase OS=Aspergil... 471 e-130
A1C7P8_ASPCL (tr|A1C7P8) DNA-directed RNA polymerase OS=Aspergil... 471 e-130
H2RFP7_PANTR (tr|H2RFP7) DNA-directed RNA polymerase (Fragment) ... 471 e-130
G3HF40_CRIGR (tr|G3HF40) DNA-directed RNA polymerase OS=Cricetul... 471 e-130
C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomy... 470 e-129
G9MXM1_HYPVG (tr|G9MXM1) DNA-directed RNA polymerase OS=Hypocrea... 470 e-129
E9EXQ5_METAR (tr|E9EXQ5) DNA-directed RNA polymerase OS=Metarhiz... 470 e-129
F7VNT9_SORMK (tr|F7VNT9) DNA-directed RNA polymerase OS=Sordaria... 470 e-129
M1W4C2_CLAPU (tr|M1W4C2) DNA-directed RNA polymerase OS=Clavicep... 470 e-129
K9G2U3_PEND2 (tr|K9G2U3) DNA-directed RNA polymerase OS=Penicill... 469 e-129
K9F8K1_PEND1 (tr|K9F8K1) DNA-directed RNA polymerase OS=Penicill... 469 e-129
A5DN82_PICGU (tr|A5DN82) DNA-directed RNA polymerase OS=Meyerozy... 468 e-129
F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomy... 468 e-129
H3CZ71_TETNG (tr|H3CZ71) DNA-directed RNA polymerase (Fragment) ... 468 e-129
A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomy... 468 e-129
E3KKR4_PUCGT (tr|E3KKR4) DNA-directed RNA polymerase OS=Puccinia... 468 e-129
F2TG61_AJEDA (tr|F2TG61) DNA-directed RNA polymerase OS=Ajellomy... 467 e-129
Q4SDA8_TETNG (tr|Q4SDA8) DNA-directed RNA polymerase (Fragment) ... 467 e-128
C5JUP7_AJEDS (tr|C5JUP7) DNA-directed RNA polymerase OS=Ajellomy... 467 e-128
C5GMV9_AJEDR (tr|C5GMV9) DNA-directed RNA polymerase OS=Ajellomy... 467 e-128
B6Q8C3_PENMQ (tr|B6Q8C3) DNA-directed RNA polymerase OS=Penicill... 466 e-128
C4Y8E3_CLAL4 (tr|C4Y8E3) DNA-directed RNA polymerase OS=Clavispo... 466 e-128
C0RZR9_PARBP (tr|C0RZR9) DNA-directed RNA polymerase OS=Paracocc... 466 e-128
C1G892_PARBD (tr|C1G892) DNA-directed RNA polymerase OS=Paracocc... 465 e-128
G0RQ42_HYPJQ (tr|G0RQ42) DNA-directed RNA polymerase OS=Hypocrea... 465 e-128
R7VVF1_COLLI (tr|R7VVF1) DNA-directed RNA polymerase, mitochondr... 464 e-127
J9N1Y6_FUSO4 (tr|J9N1Y6) DNA-directed RNA polymerase OS=Fusarium... 464 e-127
F9F6M8_FUSOF (tr|F9F6M8) DNA-directed RNA polymerase OS=Fusarium... 463 e-127
C1GZG1_PARBA (tr|C1GZG1) DNA-directed RNA polymerase OS=Paracocc... 463 e-127
N1RVU8_FUSOX (tr|N1RVU8) DNA-directed RNA polymerase, mitochondr... 463 e-127
N4UNZ4_FUSOX (tr|N4UNZ4) DNA-directed RNA polymerase, mitochondr... 463 e-127
R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna... 462 e-127
B5RTF6_DEBHA (tr|B5RTF6) DNA-directed RNA polymerase OS=Debaryom... 462 e-127
D6WV41_TRICA (tr|D6WV41) DNA-directed RNA polymerase OS=Triboliu... 460 e-126
G3JSG1_CORMM (tr|G3JSG1) DNA-directed RNA polymerase OS=Cordycep... 460 e-126
H0VY05_CAVPO (tr|H0VY05) DNA-directed RNA polymerase OS=Cavia po... 460 e-126
C7YY77_NECH7 (tr|C7YY77) DNA-directed RNA polymerase OS=Nectria ... 459 e-126
C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomy... 459 e-126
J4UIN0_BEAB2 (tr|J4UIN0) DNA-directed RNA polymerase OS=Beauveri... 459 e-126
G9NT70_HYPAI (tr|G9NT70) DNA-directed RNA polymerase OS=Hypocrea... 459 e-126
R8BT27_9PEZI (tr|R8BT27) Putative dna-directed rna polymerase pr... 459 e-126
K2RJP7_MACPH (tr|K2RJP7) DNA-directed RNA polymerase OS=Macropho... 459 e-126
K7L904_SOYBN (tr|K7L904) Uncharacterized protein OS=Glycine max ... 458 e-126
G8B7X1_CANPC (tr|G8B7X1) DNA-directed RNA polymerase OS=Candida ... 458 e-126
G4NFN6_MAGO7 (tr|G4NFN6) DNA-directed RNA polymerase OS=Magnapor... 456 e-125
L7JAR4_MAGOR (tr|L7JAR4) DNA-directed RNA polymerase OS=Magnapor... 456 e-125
L7IDF0_MAGOR (tr|L7IDF0) DNA-directed RNA polymerase OS=Magnapor... 456 e-125
A5JEF2_PARLI (tr|A5JEF2) DNA-directed RNA polymerase OS=Paracent... 454 e-125
H0YQS8_TAEGU (tr|H0YQS8) DNA-directed RNA polymerase (Fragment) ... 453 e-124
M3IK19_CANMA (tr|M3IK19) DNA-directed RNA polymerase OS=Candida ... 452 e-124
F9XJE6_MYCGM (tr|F9XJE6) DNA-directed RNA polymerase OS=Mycospha... 451 e-124
Q17K00_AEDAE (tr|Q17K00) DNA-directed RNA polymerase OS=Aedes ae... 450 e-123
C5ME71_CANTT (tr|C5ME71) DNA-directed RNA polymerase OS=Candida ... 450 e-123
Q6CH64_YARLI (tr|Q6CH64) DNA-directed RNA polymerase OS=Yarrowia... 450 e-123
F4WHT1_ACREC (tr|F4WHT1) DNA-directed RNA polymerase OS=Acromyrm... 449 e-123
H8X1L6_CANO9 (tr|H8X1L6) DNA-directed RNA polymerase OS=Candida ... 448 e-123
K3W0W7_FUSPC (tr|K3W0W7) DNA-directed RNA polymerase OS=Fusarium... 447 e-122
B2WGL2_PYRTR (tr|B2WGL2) DNA-directed RNA polymerase OS=Pyrenoph... 447 e-122
E9J4Y7_SOLIN (tr|E9J4Y7) DNA-directed RNA polymerase (Fragment) ... 446 e-122
R7QN31_CHOCR (tr|R7QN31) Stackhouse genomic scaffold, scaffold_4... 446 e-122
G3W635_SARHA (tr|G3W635) DNA-directed RNA polymerase (Fragment) ... 445 e-122
B9W6L5_CANDC (tr|B9W6L5) DNA-directed RNA polymerase OS=Candida ... 443 e-121
E1ZV06_CAMFO (tr|E1ZV06) DNA-directed RNA polymerase OS=Camponot... 443 e-121
G3AEY0_SPAPN (tr|G3AEY0) Putative uncharacterized protein OS=Spa... 442 e-121
F7GCL4_CALJA (tr|F7GCL4) DNA-directed RNA polymerase (Fragment) ... 442 e-121
H6BKV4_EXODN (tr|H6BKV4) DNA-directed RNA polymerase OS=Exophial... 442 e-121
B0W1Q8_CULQU (tr|B0W1Q8) DNA-directed RNA polymerase OS=Culex qu... 441 e-121
E3RGN3_PYRTT (tr|E3RGN3) DNA-directed RNA polymerase OS=Pyrenoph... 440 e-120
E4ZQ41_LEPMJ (tr|E4ZQ41) DNA-directed RNA polymerase OS=Leptosph... 439 e-120
B4LUB0_DROVI (tr|B4LUB0) DNA-directed RNA polymerase OS=Drosophi... 438 e-120
C4YFJ1_CANAW (tr|C4YFJ1) DNA-directed RNA polymerase OS=Candida ... 438 e-120
Q5ABC9_CANAL (tr|Q5ABC9) DNA-directed RNA polymerase OS=Candida ... 438 e-120
R0IQ82_SETTU (tr|R0IQ82) Uncharacterized protein OS=Setosphaeria... 437 e-120
A5DVV6_LODEL (tr|A5DVV6) DNA-directed RNA polymerase OS=Lodderom... 437 e-119
G3PHQ7_GASAC (tr|G3PHQ7) DNA-directed RNA polymerase (Fragment) ... 437 e-119
L5L765_PTEAL (tr|L5L765) DNA-directed RNA polymerase OS=Pteropus... 437 e-119
J9K183_ACYPI (tr|J9K183) DNA-directed RNA polymerase OS=Acyrthos... 436 e-119
Q0U2N8_PHANO (tr|Q0U2N8) DNA-directed RNA polymerase OS=Phaeosph... 436 e-119
B4KET7_DROMO (tr|B4KET7) DNA-directed RNA polymerase OS=Drosophi... 436 e-119
B3MN87_DROAN (tr|B3MN87) DNA-directed RNA polymerase OS=Drosophi... 435 e-119
N4XC35_COCHE (tr|N4XC35) Uncharacterized protein OS=Bipolaris ma... 435 e-119
M2TI11_COCHE (tr|M2TI11) DNA-directed RNA polymerase OS=Bipolari... 435 e-119
Q0QFS0_9EUKA (tr|Q0QFS0) DNA-directed RNA polymerase (Fragment) ... 433 e-118
B4JQF3_DROGR (tr|B4JQF3) DNA-directed RNA polymerase OS=Drosophi... 432 e-118
Q0QFS3_9MYCE (tr|Q0QFS3) DNA-directed RNA polymerase (Fragment) ... 431 e-117
B3RXA6_TRIAD (tr|B3RXA6) DNA-directed RNA polymerase (Fragment) ... 431 e-117
B4MZP1_DROWI (tr|B4MZP1) DNA-directed RNA polymerase OS=Drosophi... 430 e-117
M2TMC0_COCSA (tr|M2TMC0) DNA-directed RNA polymerase OS=Bipolari... 429 e-117
M3WNJ2_FELCA (tr|M3WNJ2) DNA-directed RNA polymerase (Fragment) ... 429 e-117
B4Q6M5_DROSI (tr|B4Q6M5) DNA-directed RNA polymerase OS=Drosophi... 428 e-117
E0VGQ8_PEDHC (tr|E0VGQ8) DNA-directed RNA polymerase OS=Pediculu... 427 e-117
A8PG00_BRUMA (tr|A8PG00) DNA-directed RNA polymerase OS=Brugia m... 427 e-117
Q9VPW4_DROME (tr|Q9VPW4) DNA-directed RNA polymerase OS=Drosophi... 427 e-116
E1GB82_LOALO (tr|E1GB82) DNA-directed RNA polymerase OS=Loa loa ... 426 e-116
B4ID50_DROSE (tr|B4ID50) DNA-directed RNA polymerase OS=Drosophi... 426 e-116
Q29LI1_DROPS (tr|Q29LI1) DNA-directed RNA polymerase OS=Drosophi... 426 e-116
M0ZLT2_SOLTU (tr|M0ZLT2) Uncharacterized protein OS=Solanum tube... 426 e-116
B4P304_DROYA (tr|B4P304) DNA-directed RNA polymerase OS=Drosophi... 424 e-115
B3N8B5_DROER (tr|B3N8B5) DNA-directed RNA polymerase OS=Drosophi... 421 e-115
E9GF52_DAPPU (tr|E9GF52) DNA-directed RNA polymerase OS=Daphnia ... 419 e-114
F7GNJ0_MACMU (tr|F7GNJ0) DNA-directed RNA polymerase OS=Macaca m... 419 e-114
Q9D196_MOUSE (tr|Q9D196) DNA-directed RNA polymerase (Fragment) ... 418 e-114
E9CAC7_CAPO3 (tr|E9CAC7) DNA-directed RNA polymerase OS=Capsaspo... 417 e-113
C5KD29_PERM5 (tr|C5KD29) Putative uncharacterized protein OS=Per... 414 e-113
A7AMS9_BABBO (tr|A7AMS9) DNA-directed RNA polymerase OS=Babesia ... 412 e-112
D5AB05_PICSI (tr|D5AB05) Putative uncharacterized protein OS=Pic... 412 e-112
Q16EA9_AEDAE (tr|Q16EA9) DNA-directed RNA polymerase OS=Aedes ae... 410 e-111
Q2PZ45_TIGCA (tr|Q2PZ45) DNA-directed RNA polymerase OS=Tigriopu... 410 e-111
Q2PZ34_TIGCA (tr|Q2PZ34) DNA-directed RNA polymerase (Fragment) ... 410 e-111
Q2PZ38_TIGCA (tr|Q2PZ38) DNA-directed RNA polymerase OS=Tigriopu... 409 e-111
F1KUB3_ASCSU (tr|F1KUB3) DNA-directed RNA polymerase OS=Ascaris ... 409 e-111
Q2PZ35_TIGCA (tr|Q2PZ35) DNA-directed RNA polymerase (Fragment) ... 409 e-111
H2Y632_CIOSA (tr|H2Y632) DNA-directed RNA polymerase (Fragment) ... 409 e-111
Q2PZ44_TIGCA (tr|Q2PZ44) DNA-directed RNA polymerase OS=Tigriopu... 409 e-111
Q2PZ43_TIGCA (tr|Q2PZ43) DNA-directed RNA polymerase OS=Tigriopu... 407 e-110
Q2PZ37_TIGCA (tr|Q2PZ37) DNA-directed RNA polymerase OS=Tigriopu... 406 e-110
L8XZH8_TUPCH (tr|L8XZH8) DNA-directed RNA polymerase OS=Tupaia c... 406 e-110
N6T6B1_9CUCU (tr|N6T6B1) Uncharacterized protein (Fragment) OS=D... 406 e-110
E2B480_HARSA (tr|E2B480) DNA-directed RNA polymerase OS=Harpegna... 406 e-110
I1FB80_AMPQE (tr|I1FB80) Uncharacterized protein OS=Amphimedon q... 405 e-110
Q4Z4B5_PLABA (tr|Q4Z4B5) DNA-directed RNA polymerase (Fragment) ... 404 e-110
Q2PZ39_TIGCA (tr|Q2PZ39) DNA-directed RNA polymerase OS=Tigriopu... 403 e-109
Q2PZ41_TIGCA (tr|Q2PZ41) DNA-directed RNA polymerase OS=Tigriopu... 403 e-109
L7LYM7_9ACAR (tr|L7LYM7) DNA-directed RNA polymerase OS=Rhipicep... 403 e-109
Q7RAE1_PLAYO (tr|Q7RAE1) DNA-directed RNA polymerase OS=Plasmodi... 403 e-109
C9S6U0_VERA1 (tr|C9S6U0) DNA-directed RNA polymerase OS=Verticil... 402 e-109
Q2PZ42_TIGCA (tr|Q2PZ42) DNA-directed RNA polymerase OS=Tigriopu... 400 e-108
Q2PZ40_TIGCA (tr|Q2PZ40) DNA-directed RNA polymerase (Fragment) ... 400 e-108
A7T5U5_NEMVE (tr|A7T5U5) DNA-directed RNA polymerase OS=Nematost... 399 e-108
Q2PZ36_TIGCA (tr|Q2PZ36) DNA-directed RNA polymerase (Fragment) ... 396 e-107
M4QNP6_TIGCA (tr|M4QNP6) Mitochondrial RNA polymerase (Fragment)... 396 e-107
A5CAT5_VITVI (tr|A5CAT5) Putative uncharacterized protein OS=Vit... 395 e-107
B3L558_PLAKH (tr|B3L558) DNA-directed RNA polymerase OS=Plasmodi... 392 e-106
D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasi... 390 e-105
A5K4R4_PLAVS (tr|A5K4R4) DNA-directed RNA polymerase OS=Plasmodi... 390 e-105
A8XWB1_CAEBR (tr|A8XWB1) DNA-directed RNA polymerase OS=Caenorha... 387 e-105
G7YI53_CLOSI (tr|G7YI53) DNA-directed RNA polymerase OS=Clonorch... 385 e-104
M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondr... 384 e-104
E3N1N7_CAERE (tr|E3N1N7) DNA-directed RNA polymerase OS=Caenorha... 384 e-103
K7N813_HETTR (tr|K7N813) DNA-directed RNA polymerase OS=Heteroca... 382 e-103
E5SG31_TRISP (tr|E5SG31) DNA-directed RNA polymerase OS=Trichine... 382 e-103
I3J2B7_ORENI (tr|I3J2B7) DNA-directed RNA polymerase OS=Oreochro... 382 e-103
I7ISY9_BABMI (tr|I7ISY9) DNA-directed RNA polymerase OS=Babesia ... 381 e-103
Q4N745_THEPA (tr|Q4N745) DNA-directed RNA polymerase OS=Theileri... 380 e-102
Q8WQA3_CAEEL (tr|Q8WQA3) DNA-directed RNA polymerase OS=Caenorha... 380 e-102
Q4UIH0_THEAN (tr|Q4UIH0) DNA-directed RNA polymerase OS=Theileri... 380 e-102
A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinop... 379 e-102
J3P6J0_GAGT3 (tr|J3P6J0) DNA-directed RNA polymerase OS=Gaeumann... 379 e-102
J3QFB0_PUCT1 (tr|J3QFB0) DNA-directed RNA polymerase OS=Puccinia... 379 e-102
B9N9Q4_POPTR (tr|B9N9Q4) Predicted protein OS=Populus trichocarp... 377 e-101
K6UTD6_9APIC (tr|K6UTD6) DNA-directed RNA polymerase OS=Plasmodi... 377 e-101
G3SEZ7_GORGO (tr|G3SEZ7) DNA-directed RNA polymerase (Fragment) ... 376 e-101
A5PEY3_CAEEL (tr|A5PEY3) DNA-directed RNA polymerase OS=Caenorha... 375 e-101
H2WBN7_CAEJA (tr|H2WBN7) DNA-directed RNA polymerase OS=Caenorha... 374 e-100
R7VAU6_9ANNE (tr|R7VAU6) Uncharacterized protein OS=Capitella te... 373 e-100
G4V993_SCHMA (tr|G4V993) DNA-directed RNA polymerase OS=Schistos... 371 e-100
B6KGP1_TOXGO (tr|B6KGP1) DNA-directed RNA polymerase OS=Toxoplas... 371 e-100
B9PQ14_TOXGO (tr|B9PQ14) DNA-directed RNA polymerase OS=Toxoplas... 371 e-100
F0VQ85_NEOCL (tr|F0VQ85) DNA-directed RNA polymerase OS=Neospora... 370 2e-99
A7S3D0_NEMVE (tr|A7S3D0) DNA-directed RNA polymerase (Fragment) ... 368 8e-99
L1LFT7_BABEQ (tr|L1LFT7) DNA-directed RNA polymerase OS=Babesia ... 366 2e-98
G0MJN3_CAEBE (tr|G0MJN3) DNA-directed RNA polymerase OS=Caenorha... 365 7e-98
H9JHD2_BOMMO (tr|H9JHD2) Uncharacterized protein OS=Bombyx mori ... 360 1e-96
H9I8M0_ATTCE (tr|H9I8M0) DNA-directed RNA polymerase OS=Atta cep... 359 3e-96
G3SF84_GORGO (tr|G3SF84) Uncharacterized protein (Fragment) OS=G... 357 1e-95
M5CVP8_STEMA (tr|M5CVP8) DNA-directed RNA polymerase OS=Stenotro... 356 3e-95
M3GE26_STEMA (tr|M3GE26) DNA-directed RNA polymerase OS=Stenotro... 355 5e-95
F4P6A9_BATDJ (tr|F4P6A9) Putative uncharacterized protein OS=Bat... 354 9e-95
M2MY29_9PEZI (tr|M2MY29) DNA-directed RNA polymerase OS=Baudoini... 352 3e-94
Q6BKS8_DEBHA (tr|Q6BKS8) DNA-directed RNA polymerase OS=Debaryom... 351 8e-94
N1QDP6_9PEZI (tr|N1QDP6) DNA/RNA polymerase OS=Mycosphaerella po... 351 8e-94
M3AMX9_9PEZI (tr|M3AMX9) DNA-directed RNA polymerase OS=Pseudoce... 350 1e-93
Q95WT2_9TRYP (tr|Q95WT2) RNA polymerase OS=Trypanosoma brucei GN... 350 1e-93
Q385J0_TRYB2 (tr|Q385J0) Mitochondrial DNA-directed RNA polymera... 349 3e-93
D0A783_TRYB9 (tr|D0A783) Mitochondrial DNA-directed RNA polymera... 349 3e-93
B2ANR4_PODAN (tr|B2ANR4) DNA-directed RNA polymerase OS=Podospor... 348 5e-93
N1PGJ0_MYCPJ (tr|N1PGJ0) Uncharacterized protein OS=Dothistroma ... 348 5e-93
J4C7R0_THEOR (tr|J4C7R0) DNA-directed RNA polymerase OS=Theileri... 347 2e-92
F0X893_GROCL (tr|F0X893) DNA-directed RNA polymerase OS=Grosmann... 345 8e-92
H3IXW4_STRPU (tr|H3IXW4) DNA-directed RNA polymerase OS=Strongyl... 343 3e-91
F9WCU6_TRYCI (tr|F9WCU6) Putative uncharacterized protein TCIL30... 342 4e-91
H2QES6_PANTR (tr|H2QES6) Uncharacterized protein OS=Pan troglody... 342 5e-91
G8YHR0_PICSO (tr|G8YHR0) DNA-directed RNA polymerase OS=Pichia s... 341 1e-90
A3LWB9_PICST (tr|A3LWB9) DNA-directed RNA polymerase (Fragment) ... 340 1e-90
A4HDH2_LEIBR (tr|A4HDH2) Putative mitochondrial DNA-directed RNA... 339 3e-90
Q4QAL7_LEIMA (tr|Q4QAL7) Putative mitochondrial DNA-directed RNA... 339 4e-90
E9AWV7_LEIMU (tr|E9AWV7) Mitochondrial DNA-directed RNA polymera... 338 5e-90
E9BGY1_LEIDB (tr|E9BGY1) Mitochondrial DNA-directed RNA polymera... 338 8e-90
A4I0V3_LEIIN (tr|A4I0V3) Putative mitochondrial DNA-directed RNA... 337 1e-89
A5DAF4_PICGU (tr|A5DAF4) DNA-directed RNA polymerase OS=Meyerozy... 337 2e-89
G0UBC8_TRYVY (tr|G0UBC8) Mitochondrial DNA-directed RNA polymera... 333 2e-88
K4EA79_TRYCR (tr|K4EA79) Mitochondrial DNA-directed RNA polymera... 330 2e-87
>F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_01s0010g00690 PE=3 SV=1
Length = 978
Score = 1345 bits (3482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1006 (66%), Positives = 767/1006 (76%), Gaps = 44/1006 (4%)
Query: 1 MWAHLAKRTFQRNFKLP---------SYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQ 51
MW +LAK + R +L + + F + LE Q S PV+G +
Sbjct: 1 MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFYFPDKARALES--QDHVNSLRPVAGLRR 58
Query: 52 VGVFT-SINELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVK 110
+GV + +ELGR F + + P +GYAS AEAI S D G +EV+
Sbjct: 59 IGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIASEEDM-----SGVDEVQ 113
Query: 111 QMVKKEVKGKPL------LDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQK 164
++V++ KG L + A+ K +LR+RQ+KMETEAWEEAAKEY+ELL D+CEQK
Sbjct: 114 ELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQK 173
Query: 165 LVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLM 224
L PNLPY+KSLFLGWFEPL+ I AEQ++CK+ + +APYF+ LPAD MAVITMHKLM
Sbjct: 174 LAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLM 233
Query: 225 GLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHA 284
GLLMT G G ARV+ AA IGEAIE+E RI PDG
Sbjct: 234 GLLMTGE-GNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASS----NNPDGGSNPV 288
Query: 285 AIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKV 344
E KL S L+K+QK+QQV I+K DD KPWGQ+A KV
Sbjct: 289 TKEQEKLR----------------KKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKV 332
Query: 345 GCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVT 404
G R+++LLIETAYIQ P QLG PPDIRPAF HT KT + ++QK RRYG+IECDPLV
Sbjct: 333 GSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVR 392
Query: 405 KGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQL 464
KGLEK+A++MVIPY+PMLVPP NWT YDKGAYLFLPSYVMR HGA+QQ EA+KRAP L
Sbjct: 393 KGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKAL 452
Query: 465 EPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK 524
EP FEAL++LGNTKWRIN+R+L VI +IW SGGRLADLVDR+DV IRK
Sbjct: 453 EPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRK 512
Query: 525 WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHL 584
WK +V+++ KEN+ERHSQRC+IELKLAVARKMK+E GF+YPHN+DFRGRAYPMHPYLNHL
Sbjct: 513 WKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHL 572
Query: 585 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSA 644
GSDLCRGILEFAEGRPLGKSGLRWLKIHLAN+YAGGVDKL YE RVAFTENHL+D+FDSA
Sbjct: 573 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSA 632
Query: 645 DRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALG 704
DRPLEGRRWWL AEDP QCLA CINLSEALRS +PETTISH+PVH DGSCNGLQHYAALG
Sbjct: 633 DRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 692
Query: 705 RDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKL 764
RDKLGAAAVNLV G++PADVYSGIA+RVL+IM++DA+KDP T QVDRKL
Sbjct: 693 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKL 752
Query: 765 VKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAAR 824
VKQTVMTSVYGVTY+GARDQIKRRLKERCAI D+ E+FSASCYAAKTTLTAL EMFEAAR
Sbjct: 753 VKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAAR 812
Query: 825 SIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV 884
SIMSWL DCAKVIAS N PVRW TP+GLP VQPYR++GR +IKTSLQVLSL+RETDKV+V
Sbjct: 813 SIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMV 872
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
KRQ TAFPPNFVHSLDGSHMMMTAVAC+KAGL+FAGVHDSYWTHACDVDEMNRILREKFV
Sbjct: 873 KRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFV 932
Query: 945 ELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
ELY PILENLLE FQKSFP LNFPPLPERGDFDLREVL S YFFN
Sbjct: 933 ELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978
>M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000780mg PE=4 SV=1
Length = 1006
Score = 1342 bits (3474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/1013 (66%), Positives = 788/1013 (77%), Gaps = 30/1013 (2%)
Query: 1 MWAHLAKRTFQRNFKLPSYS----PSTR---FSQHSNFLEKI--LQPRN--QSTCPVSGS 49
MW +LAK+ R L S S PS+ FSQ S+FL+K + R + V G
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 50 AQVGVFTSINE-LGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANE 108
QVG S E LGR + YP+G++ A+GYASVAEAI +S+D EED S G+ E
Sbjct: 61 RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAI-ASTDGEED-SSGSEE 118
Query: 109 VKQMVKKEVKGKPLLDRKAKY-----------KDTMLRKRQVKMETEAWEEAAKEYQELL 157
+++M++ ++ +++ K K +LRKRQ+K+ETEAW+EAAKEYQELL
Sbjct: 119 IQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELL 178
Query: 158 EDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAV 217
D+CEQKL PNLPY+KSLFLGWFEPL+ AI A+Q+ CK+ + + +HAPYF+ LPADKMAV
Sbjct: 179 ADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAV 238
Query: 218 ITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEP 277
ITMHKLMGLLMTN+ GIG RV+ AA IGEAIE+E RI E
Sbjct: 239 ITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAE-- 296
Query: 278 DGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWG 337
+ IE KL+D + LIK+QKMQQV GI+K +D KPWG
Sbjct: 297 -ADSVPVTIEQEKLADEQEKLTKEQERLRKKV--NKLIKRQKMQQVRGIVKEQEDLKPWG 353
Query: 338 QEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGII 397
QEA KVGCR++QLL++TAYIQ PV Q+G PPDIRPAF H KT D+QK RRYG+I
Sbjct: 354 QEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVI 413
Query: 398 ECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVK 457
ECDP+V KG+EK+A++MV+PY+PMLVPP NWT YD+GAYLFLPSYVMRTHGAKQQ E VK
Sbjct: 414 ECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVK 473
Query: 458 RAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXX 517
R P QLEP+FEALD+LG+TKWR+N+R+L VI +IW SGGRLADLVDR+DV
Sbjct: 474 RTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTE 533
Query: 518 XXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPM 577
IRKWK ++K KEN+ERHSQRC+IELKLA +RKMK+E+GFYYPHN+DFRGRAYPM
Sbjct: 534 DEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPM 593
Query: 578 HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHL 637
HPYLNHLGSD+CRGILEF+EGR LGKSGLRWLKIHLANLYAGGVDKL ++ R AFTENH+
Sbjct: 594 HPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHV 653
Query: 638 DDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGL 697
D++FDSADRPLEGRRWWL AEDP QCLAACINL EALRSP+PETTIS++PVH DGSCNGL
Sbjct: 654 DEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGL 713
Query: 698 QHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXX 757
QHYAALGRDKLGAAAVNLV GD+PADVYSGIA+RVL+IMR DAEKDP TN
Sbjct: 714 QHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLI 773
Query: 758 XQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALE 817
QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER +I DD+ LF+A+CYAA+TTLTAL
Sbjct: 774 NQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALG 833
Query: 818 EMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR 877
EMFEAARSIMSWL +CAKVIAS N+PVRW TP+GLP VQPYRQ+GR +IKTSLQVL+L+R
Sbjct: 834 EMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQR 893
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
ETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACKKAGL+FAGVHDSYWTHACD+DEMNR
Sbjct: 894 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNR 953
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
ILREKFVELYEAPILENLLE FQ+SFP L FPPLP+RGDFDLR+VL S YFFN
Sbjct: 954 ILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_1466350 PE=3 SV=1
Length = 997
Score = 1315 bits (3403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1012 (64%), Positives = 775/1012 (76%), Gaps = 37/1012 (3%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQS--TCPVS--GSAQVGVFT 56
MW + A+RT + KL S T+ +Q + L+K+ P Q+ P S GS ++ +
Sbjct: 1 MWRNFARRTSLSSKKLNFSSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISGLS 60
Query: 57 SIN-ELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKK 115
S N E + +F+ PFG S L +GYA+ A +++S+D E D SG +E+++ +++
Sbjct: 61 SQNHEFIKPSFTNLTNPFGF--SHFLFKGYATAAAQVIASTD-ESDFSG-CDELQEQIEE 116
Query: 116 EVKGKPLLDRKAKY-----------------KDTMLRKRQVKMETEAWEEAAKEYQELLE 158
K +D + K T+L+KRQ+KMETEAWEEAA+EYQELL
Sbjct: 117 INKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAREYQELLT 176
Query: 159 DICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVI 218
D+CEQKL PNLPY+KSLFLGWFEPL+ AI EQE+ ++ + K++H PYF+ LPAD MAVI
Sbjct: 177 DMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMMAVI 236
Query: 219 TMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPD 278
TMHKLMGLLMT + G G RV+ AA +GEAIE+EARI EEP+
Sbjct: 237 TMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKN--EEPE 294
Query: 279 GEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQ 338
G+ + KL+ + L+K+QK+QQV G+ KG DD PWGQ
Sbjct: 295 GKLEPVTSDAEKLA---------KEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQ 345
Query: 339 EARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIE 398
EA+ KVGCR++QLLIETAYIQ PV+QLG PDIRPAF HT K M D+QK RRYG+IE
Sbjct: 346 EAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIE 405
Query: 399 CDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKR 458
CDP+V GLEKSA++MVIPY+PMLVPP NW YD+GAYLFLPSYVMRTHGAKQQ AVKR
Sbjct: 406 CDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKR 465
Query: 459 APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXX 518
P+ QLEP++EAL++LGNTKWRIN+++L V+ +IW +GGRLA L+DR+D
Sbjct: 466 TPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELETED 525
Query: 519 XXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMH 578
I+KWK +VK + KEN+ERHSQRC+IELKLAVARKMK+E GFYYPHN+DFRGRAYPMH
Sbjct: 526 ENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 585
Query: 579 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLD 638
P+LNHLGSD+CRGILEFAEGRPLGKSG RWLKIHLAN+YAGGVDKL YE RVAFTENHLD
Sbjct: 586 PHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENHLD 645
Query: 639 DVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQ 698
+FDSADRPLEGRRWWL AEDP QCLA C NL+EA RS +PETTISH+P+H DGSCNGLQ
Sbjct: 646 YIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNGLQ 705
Query: 699 HYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXX 758
HYAALGRDKLGAAAVNLV G++PADVYSGIA+RVL+IMR DAEKDP TN
Sbjct: 706 HYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLLIN 765
Query: 759 QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEE 818
+VDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER A+ DD L++ASCYAAKTTL ALEE
Sbjct: 766 EVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMALEE 825
Query: 819 MFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE 878
MFE ARSIM+WL +CAKVIAS N+PV+WTTP+GLP VQPYRQ+GR +IKTSLQ+L+L++E
Sbjct: 826 MFEGARSIMAWLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKE 885
Query: 879 TDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRI 938
TDK++VKRQ TAFPPNFVHSLDGSHMMMTAVACK AGL+FAGVHDSYWTHACDVDEMNRI
Sbjct: 886 TDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRI 945
Query: 939 LREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LRE FVELYEAPILENLLE FQKSFPKL FPPLP+RGDFDLR+VL S YFFN
Sbjct: 946 LRENFVELYEAPILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997
>B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_769753 PE=3 SV=1
Length = 852
Score = 1314 bits (3400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/861 (72%), Positives = 704/861 (81%), Gaps = 13/861 (1%)
Query: 130 KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVA 189
K T+L++RQVKMETEAWE+ A+EYQE+LED+CEQKL PNLPY+KSLFLGWFEPL+ AI+A
Sbjct: 5 KYTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAILA 64
Query: 190 EQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEA 249
EQE+CK + R + H YFNDLPAD MAVITMHKLMGLLMT + G RV+ AA +GEA
Sbjct: 65 EQELCKVNSR-VPHRAYFNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQAASVVGEA 123
Query: 250 IENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXX 309
IENEA+I E GE A E KL+
Sbjct: 124 IENEAKIHKFLEKTKKRKNLKEKISE---GESVAAIYEGEKLT---------KEQEKLRK 171
Query: 310 XXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP 369
++L+K+QK+ QV I+KG DD PWGQEA KVG R++QL+IETAYIQ P+ Q+G P
Sbjct: 172 KVTTLMKKQKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGP 231
Query: 370 PDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWT 429
PDIRPAF HT KT D+QK RRYG+IECDPLV KGLEKSA++MVIPY+PMLVPP NWT
Sbjct: 232 PDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWT 291
Query: 430 RYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVI 489
YD+GAY FLPSYVMR HGAKQQ A+KRA NQLEP+F+ALD+LGNTKWR+N+R+L VI
Sbjct: 292 GYDQGAYFFLPSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVI 351
Query: 490 SQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELK 549
+IW SGG LA LVDR+DV IRKW+ +VK++ KEN+ERHSQRC++ELK
Sbjct: 352 DRIWASGGHLAGLVDREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELK 411
Query: 550 LAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 609
LAVARKMK+E+GFYYPHNVDFRGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGLRWL
Sbjct: 412 LAVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWL 471
Query: 610 KIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACIN 669
KIHLANLYAGGVDKL Y+ R++FTENHLDD+FDSADRPLEG+RWWL AEDP QCLA CIN
Sbjct: 472 KIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCIN 531
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
LSEALRSP+PET ISH PVH DGSCNGLQHYAALGRDKLGAAAVNLV G +PADVYSGIA
Sbjct: 532 LSEALRSPSPETAISHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIA 591
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
+RVL+IMR+DAE DP N QVDRKLVKQTVMTSVYGVTY+GARDQIKRRL
Sbjct: 592 ARVLDIMRRDAENDPAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 651
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTP 849
KERC I DD +L+SA+CYAAKTTLTALEEMFE AR IM+WL +CAKVIAS N+PV+WTTP
Sbjct: 652 KERCNIADDPQLYSAACYAAKTTLTALEEMFEGARGIMAWLGECAKVIASENQPVQWTTP 711
Query: 850 IGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
GLP VQPYRQ+GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAV
Sbjct: 712 FGLPVVQPYRQLGRQLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 771
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
ACK+AGL+FAGVHDSYWTHACDVDEMNRILREKFVELYE PILENLLESFQ SFP L FP
Sbjct: 772 ACKEAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFP 831
Query: 970 PLPERGDFDLREVLNSQYFFN 990
PLPERGDFDLR+VL S YFFN
Sbjct: 832 PLPERGDFDLRDVLQSTYFFN 852
>B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_765989 PE=3 SV=1
Length = 877
Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/862 (72%), Positives = 711/862 (82%), Gaps = 15/862 (1%)
Query: 130 KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVA 189
K +L++RQ+KMETEAWE+AA+EYQE+LED+CEQKL PNLPY+KSLFLGWFEPL+ AIVA
Sbjct: 30 KYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIVA 89
Query: 190 EQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEA 249
EQE+CK++ R ++H +F+DLPAD MAVITMHKLMGLLMT + G RV+ AA +GEA
Sbjct: 90 EQELCKRNLR-VSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQAASVVGEA 148
Query: 250 IENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENG-KLSDXXXXXXXXXXXXXXX 308
IE+E RI E GE AAIE G KLS
Sbjct: 149 IEHEGRIHKFLEKTKKRKNVEAKISE---GE-SDAAIEEGEKLS---------KEQEKLR 195
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
++LIK+QK+QQV I+KG DD +PWGQE KVG R++QL+IETAYIQ P+ Q+G
Sbjct: 196 KKVTTLIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDG 255
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PPDIRPAF HT KT D+QK RRYG+IECDPLV KGLEKSA++MVIPY+PMLVPP NW
Sbjct: 256 PPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNW 315
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YD+GA+LFLPSYVMR HG+KQQ +AVKRA NQLEP+F+ALD+LGNTKWRIN+R+L V
Sbjct: 316 TGYDQGAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVV 375
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW SGG LA LVDR+D IRKW +V+++ KEN+ERHSQRC+IEL
Sbjct: 376 VDRIWASGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIEL 435
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGLRW
Sbjct: 436 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRW 495
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R++FTENHLDD+FDSAD+PLEGRRWWL AEDP QCLAACI
Sbjct: 496 LKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACI 555
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NLSEALRSP+PET SH PVH DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGI
Sbjct: 556 NLSEALRSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGI 615
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RVL+IM++DAEKDP N QVDRKLVKQTVMTSVYGVTY+GARDQIKRR
Sbjct: 616 ATRVLDIMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 675
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKERC I DD +L+SA+CYAAKTTL ALEEMFE AR IM+WL +CAKVIAS N+PVRWTT
Sbjct: 676 LKERCIIADDPQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTT 735
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYRQ+GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 736 PLGLPVVQPYRQLGRHLIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 795
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+AGL+FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQ SFP L F
Sbjct: 796 VACKEAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKF 855
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERG FDL++VL S YFFN
Sbjct: 856 PPLPERGVFDLKDVLRSTYFFN 877
>K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc05g010660.2 PE=3 SV=1
Length = 993
Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1027 (63%), Positives = 763/1027 (74%), Gaps = 71/1027 (6%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRN-QSTC------PVSGSAQVG 53
MW +++K+ + R + +T S F + + R Q C P G +Q
Sbjct: 1 MWRYISKQVYSRKLR------NTHDSDFLGFAQSFRKTRPLQGLCEEGYRNPNLGVSQSS 54
Query: 54 VFTSINELGR--------------------SNFSLFEYPFGLNSSLKLARGYASVAEAIV 93
+F+ +N R S FS + F + SL + R Y S AEAI
Sbjct: 55 IFSRVNGKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGSLGVLRSYGSAAEAIA 114
Query: 94 SSSDTEEDCSGGANEVKQMVKKEVKGKPLLDRK----------AKYKDTMLRKRQVKMET 143
S+S EED +++M K+ K L K KY +LR+RQ+K+ET
Sbjct: 115 STS--EEDIDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKY--NLLRRRQIKVET 170
Query: 144 EAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTH 203
EAWE+AAKEYQELL D+CEQKL PNLPY+KSLFLGWFEPLK AI AEQ++C + + +
Sbjct: 171 EAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAY 230
Query: 204 APYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXX 263
AP+F+ LPA+ MAVITMHKLMGLLMT G G ARV+ AA IGEAIE+EARI
Sbjct: 231 APFFDQLPAEMMAVITMHKLMGLLMTG-GGSGSARVVQAASHIGEAIEHEARIHRFLEKT 289
Query: 264 XXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQV 323
DG A + K + L+K+QK+QQV
Sbjct: 290 KKNAL---------DGSLEETAGDIMKERERLRKKVKI------------LMKKQKLQQV 328
Query: 324 MGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTA 383
I+K DD KPWGQ+ KVGCR++Q+LIETAYIQ P QL PPDIRPAF HT KT
Sbjct: 329 RKIVKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTV 388
Query: 384 MADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYV 443
D+ K RRYG+I+CDPLV KGL+K+A++MVIPY+PMLVPP NW+ YD+GAYLFLPSY+
Sbjct: 389 --DTVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYI 446
Query: 444 MRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLV 503
MRTHGAKQQ EAVKR P QLEP+F+ALD+LGNTKWR+N+R+L ++ +IW SGGRLADLV
Sbjct: 447 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLV 506
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
DR+DV I+KWK +VK KEN ERHSQRC+IELKLAVARKMK+E+GFY
Sbjct: 507 DREDVPLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFY 566
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGLRWLKIHLAN+Y GGVDK
Sbjct: 567 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDK 626
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
L E R AF+ENH++D+FDSADRPLEGRRWWL AEDP QCLA CI++SEALRSP+PET+I
Sbjct: 627 LSCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSI 686
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH+P+H DGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYSGIA+RVL+IM++DA+KD
Sbjct: 687 SHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKD 746
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFS 803
P T+ QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER AIEDD+ELF+
Sbjct: 747 PATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFA 806
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGR 863
A+CYAAKTTLTAL EMFEAARSIMSWL DCAK+IA N+PVRWTTP+GLP VQPYR++GR
Sbjct: 807 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGR 866
Query: 864 SIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHD 923
+IKTSLQ+L+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA+ACK+AGL FAGVHD
Sbjct: 867 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHD 926
Query: 924 SYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVL 983
SYWTHA DVD+MN+ILREKFVELY+APILENLLESFQ+SFP L FPPLPERGDFDLREVL
Sbjct: 927 SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 986
Query: 984 NSQYFFN 990
S YFFN
Sbjct: 987 ESPYFFN 993
>D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_14s0083g00790 PE=2 SV=1
Length = 1035
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/1019 (63%), Positives = 763/1019 (74%), Gaps = 52/1019 (5%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFL---EKILQPRNQSTCPVS---------- 47
MW ++AKR R + Y S S+ +FL + ++ P
Sbjct: 40 MWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFS 99
Query: 48 --GSAQVGVFTSINE-LGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSG 104
G ++G +S + +GR +F G + + YASVAEA VSS+D EED S
Sbjct: 100 EMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFC--PKSYASVAEA-VSSTDVEEDVSA 156
Query: 105 GANEVKQMV---KKEVKGKPLLDRKAKYKDTM---------LRKRQVKMETEAWEEAAKE 152
++E+++++ KKE K + R+ K K LR+RQVK+ETEAWE AAKE
Sbjct: 157 -SDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKE 215
Query: 153 YQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPA 212
Y+ELL D+CEQKL PNLPYMKSLFLGWFEPL+ AIV EQE+C+ K +APYF+ LPA
Sbjct: 216 YKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPA 275
Query: 213 DKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXX 272
D M+VITMHKL+GLLMT G RV+ AA IG+AIE E RI
Sbjct: 276 DMMSVITMHKLVGLLMTGGEH-GSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDK 334
Query: 273 XXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDD 332
E G F E KL ++L+K+QK+ I+KG D+
Sbjct: 335 NVE--GGGFDPVIHEQEKLR----------------KKVTNLMKKQKLHAARQIVKGHDN 376
Query: 333 WKPWGQEARAKVGCRVMQLLIETAYIQSPV-SQLGGSPPDIRPAFKHTFKTAMADSQKDI 391
KPWG EA+AKVG R+++LL++TAYIQ PV +QL +PPDIRPAF HTFKT M +++K
Sbjct: 377 SKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIG 436
Query: 392 RRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ 451
RR+G+IECDPLV KGLE++A++MVIPY+PMLVPP WT YDKGA+LFLPSYVMRTHGA+Q
Sbjct: 437 RRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQ 496
Query: 452 QCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXX 511
Q EAVKRAP NQLEP+FEAL++LGNTKWRIN+RL DV+ +IW GG LADLVDR+DV
Sbjct: 497 QREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLP 556
Query: 512 XXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFR 571
+RKWK +VK++ K N+ERHSQRC+IELKLAVARKMK+E GF+YPHN+DFR
Sbjct: 557 EKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFR 616
Query: 572 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVA 631
GRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLKIHLANL+AGGVDKL +E R+
Sbjct: 617 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRIT 676
Query: 632 FTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMD 691
FTENHLDD+FDSADRPLEG+RWWL AEDP Q LAACINLSEALRS +PETTISH+PVH D
Sbjct: 677 FTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQD 736
Query: 692 GSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXX 751
GSCNGLQHYAALGRD+LGA AVNLV G++PADVYSGIA+RVL+IM++DAEKDP
Sbjct: 737 GSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDAL 796
Query: 752 XXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKT 811
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER AI DD ELF A+CYAAK
Sbjct: 797 RARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKI 856
Query: 812 TLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
TLTAL EMF+AARSIMSWL DCAK+IAS N+PVRWTTP+GLP VQPYR++GR +IKTSLQ
Sbjct: 857 TLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ 916
Query: 872 VLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACD 931
VL+L+RET+ ++VKRQ TAFPPNFVHSLDGSHMMMTA+ACKKAGL+FAGVHDSYWTHACD
Sbjct: 917 VLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACD 976
Query: 932 VDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
VDEMNR+LREKFV+LYE PILENLLESFQ+SFP L FPPLPERGDFDLREVL S YFFN
Sbjct: 977 VDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035
>B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_28503 PE=2 SV=1
Length = 983
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/862 (68%), Positives = 698/862 (80%), Gaps = 19/862 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K MLR+RQ+++ETEAWE+AA+EY+ELL D+C+QKL PNLPY+KSLFLGWFEPL+ I+
Sbjct: 141 HKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQII 200
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + + +HA YFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 201 AEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 259
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE G A E +L
Sbjct: 260 AIEHEVRIHKFLEKTKKKSNKEMDNEEE--GGDSDIAKEQERLR---------------- 301
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D+ KPWGQ+A AKVG R+++L+IETAYIQ P SQ
Sbjct: 302 KKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADG 361
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PPDIRPAF H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP +W
Sbjct: 362 PPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISW 421
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ +AV+RAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 422 TGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSI 481
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV ++KW+ ++ KEN+ERHSQRC++EL
Sbjct: 482 VDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVEL 541
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRW
Sbjct: 542 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 601
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSADRPLEG+RWWL AEDP QCLA CI
Sbjct: 602 LKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCI 661
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GI
Sbjct: 662 NLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGI 721
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIM+ DA KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRR
Sbjct: 722 ATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 781
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I DDSELFSASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWTT
Sbjct: 782 LKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 841
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 842 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 901
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLESF+KSFP+L F
Sbjct: 902 VACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKF 961
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFDL +VL S YFFN
Sbjct: 962 PPLPERGDFDLTDVLGSPYFFN 983
>Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT1 PE=2 SV=1
Length = 1017
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/862 (68%), Positives = 698/862 (80%), Gaps = 19/862 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K MLR+RQ+++ETEAWE+AA+EY+ELL D+C+QKL PNLPY+KSLFLGWFEPL+ I+
Sbjct: 175 HKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQII 234
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + + +HA YFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 235 AEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 293
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE G A E +L
Sbjct: 294 AIEHEVRIHKFLEKTKKKSNKEMDNEEE--GGDSDIAKEQERLR---------------- 335
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D+ KPWGQ+A AKVG R+++L+IETAYIQ P SQ
Sbjct: 336 KKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADG 395
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PPDIRPAF H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP +W
Sbjct: 396 PPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISW 455
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ +AV+RAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 456 TGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSI 515
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV ++KW+ ++ KEN+ERHSQRC++EL
Sbjct: 516 VDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVEL 575
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRW
Sbjct: 576 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 635
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSADRPLEG+RWWL AEDP QCLA CI
Sbjct: 636 LKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCI 695
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GI
Sbjct: 696 NLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGI 755
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIM+ DA KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRR
Sbjct: 756 ATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 815
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I DDSELFSASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWTT
Sbjct: 816 LKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 875
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 876 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 935
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLESF+KSFP+L F
Sbjct: 936 VACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKF 995
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFDL +VL S YFFN
Sbjct: 996 PPLPERGDFDLTDVLGSPYFFN 1017
>J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB09G11010 PE=3 SV=1
Length = 963
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/920 (66%), Positives = 720/920 (78%), Gaps = 32/920 (3%)
Query: 76 NSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGKPLLDRKAK-----YK 130
+SS ++ARG S A ++ E EV + ++ +GK ++ KA YK
Sbjct: 71 HSSEEIARGDNSSLPAPAPATGQE------GREVGR--RRTGRGKHSVEAKASHGFGYYK 122
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
MLR+RQV++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+AE
Sbjct: 123 YAMLRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 182
Query: 191 QEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAI 250
Q++ + + +HA YFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEAI
Sbjct: 183 QDLVCERRARASHARYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAI 241
Query: 251 ENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXX 310
E+E R+ EE A E +L
Sbjct: 242 EHEVRLHKFLEKPKKKRSKEMDNEEEVGCS--DIAKEQERLR----------------KK 283
Query: 311 XSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPP 370
+ L+K+ K++QV I+K D+ KPWGQ+ AKVG R+++L+IETAYIQ P SQ PP
Sbjct: 284 VTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPP 343
Query: 371 DIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTR 430
DIRPAF H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP +WT
Sbjct: 344 DIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTG 403
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
YDKGA+LFLPSYVMRTHGA+QQ EAVKRAP Q++ +FEALD+LG+TKWR+N+R+L ++
Sbjct: 404 YDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVD 463
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
+IW+SGGRLADLVDR DV ++KW+ +K KEN+ERHSQRC++ELKL
Sbjct: 464 RIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKL 523
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
AVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLK
Sbjct: 524 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLK 583
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
IHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSADRPLEG+RWWL AEDP QCLA CINL
Sbjct: 584 IHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINL 643
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
+EALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GIA+
Sbjct: 644 TEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIAT 703
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
RVLEIMR DA KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLK
Sbjct: 704 RVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLK 763
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
ER I DDSELFSASCYAAK TLTAL EMF+AARSIM+WL DCAK+IA NEPV+WTTP+
Sbjct: 764 ERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPL 823
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVA 910
GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVA
Sbjct: 824 GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 883
Query: 911 CKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPP 970
CK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF+KSFP+L FPP
Sbjct: 884 CKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPP 943
Query: 971 LPERGDFDLREVLNSQYFFN 990
LPERGDFDL++VL S YFFN
Sbjct: 944 LPERGDFDLKDVLGSPYFFN 963
>I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 993
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/862 (68%), Positives = 699/862 (81%), Gaps = 19/862 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K MLR+RQ+++ETEAWE+AA+EY+ELL D+C+QKL PNLPY+KSLFLGWFEPL+ I+
Sbjct: 151 HKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQII 210
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + + +HA +FN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 211 AEQELVGERGARASHARFFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 269
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE G A E +L
Sbjct: 270 AIEHEVRIHKFLEKTKKKSNKEMDNEEE--GGDSDIAKEQERLR---------------- 311
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D+ KPWGQ+A AKVG R+++L+IETAYIQ P SQ
Sbjct: 312 KKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADG 371
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PPDIRPAF H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP +W
Sbjct: 372 PPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISW 431
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ +AV+RAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 432 TGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSI 491
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV ++KW+ ++ KEN+ERHSQRC++EL
Sbjct: 492 VDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVEL 551
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRW
Sbjct: 552 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 611
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSADRPLEG+RWWL AEDP QCLA CI
Sbjct: 612 LKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCI 671
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GI
Sbjct: 672 NLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGI 731
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIM+ DA KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRR
Sbjct: 732 ATRVVEIMKNDALKDPSTDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 791
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I DDSELFSASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWTT
Sbjct: 792 LKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 851
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 852 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 911
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLESF+KSFP+L F
Sbjct: 912 VACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKF 971
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFDL++VL S YFFN
Sbjct: 972 PPLPERGDFDLKDVLGSPYFFN 993
>C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb02g039520 PE=3 SV=1
Length = 976
Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/862 (68%), Positives = 695/862 (80%), Gaps = 18/862 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
++ T LR+RQ+++ETEAWE+AAKEY+ELL D+CEQKL PNLPY+KSLFLGWFEPL+ IV
Sbjct: 133 HRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIV 192
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
EQE+ + +H PYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 193 TEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 251
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE G+ A E +L
Sbjct: 252 AIEHEVRINRFLEKTRKKSNKEMEKEEEAAGD-TDIAKEQQRLR---------------- 294
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D+ +PWGQ+ +AKVG R+++L ++TA+IQ P SQ
Sbjct: 295 KKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDG 354
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PDIRPAF+H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP W
Sbjct: 355 LPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICW 414
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ EAVKRAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 415 TGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSI 474
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV I+ WK ++++ KEN+ERHSQRC++EL
Sbjct: 475 VDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVEL 534
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL W
Sbjct: 535 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHW 594
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ RVAFTENHL+++FDSADRPLEG+RWWL AEDP QCLA C+
Sbjct: 595 LKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCM 654
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRS +PETTISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GI
Sbjct: 655 NLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGI 714
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RVLEIMR DA+KDP + QVDRKLVKQTVMTSVYGVTYVGARDQIKRR
Sbjct: 715 ATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 774
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I D++ELF ASCYAAK TLTAL EMF+AAR IM+WL DCAKVIA NEPVRWTT
Sbjct: 775 LKERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTT 834
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 835 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 894
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLESF+KSFPKL F
Sbjct: 895 VACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKF 954
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFD++EVL S YFFN
Sbjct: 955 PPLPERGDFDMKEVLESPYFFN 976
>K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria italica
GN=Si028824m.g PE=3 SV=1
Length = 972
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/863 (68%), Positives = 695/863 (80%), Gaps = 21/863 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K LR+RQ+++ETEAWE+AAKEY+ELL D+CEQKL PNLPY+KSLFLGWFEPL+ I
Sbjct: 130 HKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQIA 189
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + +H PYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 190 AEQELVANRGSRASHGPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 248
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEP-DGEFYHAAIENGKLSDXXXXXXXXXXXXXX 307
AIE+E RI EE D + A E +L
Sbjct: 249 AIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDI---AKEQQRLR--------------- 290
Query: 308 XXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGG 367
+ L+K+QK++QV I+K DD +PWGQ+A AKVG R+++L IETA+IQ P SQ
Sbjct: 291 -KKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSSD 349
Query: 368 SPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNN 427
PDIRPAF+H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP
Sbjct: 350 GLPDIRPAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPIC 409
Query: 428 WTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLD 487
WT YDKGA+LFLPSYVMRTHGA+QQ EAVKRAP Q++ +FEAL++LG+TKWR+N+R+L
Sbjct: 410 WTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLS 469
Query: 488 VISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIE 547
+I +IW+SGGRLADLVDR DV ++KW+ +++ K N+ERHSQRC++E
Sbjct: 470 IIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVE 529
Query: 548 LKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLR 607
LKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG+SGLR
Sbjct: 530 LKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLR 589
Query: 608 WLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAAC 667
WLKIHLANLYAGGVDKL Y R+AF ENHL+++FDSADRPLEG+RWWL AEDP QCLA C
Sbjct: 590 WLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVC 649
Query: 668 INLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSG 727
+NL+EALRSP+PE TISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSG
Sbjct: 650 MNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSG 709
Query: 728 IASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKR 787
IA+RV+EIMR+D++KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKR
Sbjct: 710 IATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 769
Query: 788 RLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWT 847
RLKER I DD+ELF ASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPV+WT
Sbjct: 770 RLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWT 829
Query: 848 TPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMT 907
TP+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMT
Sbjct: 830 TPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 889
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN 967
AVACK+ GL+FAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLLESF+KSFPKL
Sbjct: 890 AVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLK 949
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
FPPLPERGDFD+++VL S YFFN
Sbjct: 950 FPPLPERGDFDMKDVLESPYFFN 972
>P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopodium album PE=2
SV=1
Length = 988
Score = 1239 bits (3205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1012 (62%), Positives = 745/1012 (73%), Gaps = 46/1012 (4%)
Query: 1 MWAHLAK----RTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTC----PVSGSAQV 52
MW +K R + + +L S +R+ + S KI Q Q++ P+ G +
Sbjct: 1 MWKKASKFEILRKIRNSGELKPSSNVSRWKESSQDSAKIRQFLGQNSVNPRFPMLGFGRN 60
Query: 53 GVFTSIN-ELGRSNFSLFEYPFGL----NSSLKLARGYASVAEAIVSSSDTEED----CS 103
G N E+G SNF + PFG+ S + A+ AE IV++S E+D
Sbjct: 61 GELLCRNSEMGGSNFMFYANPFGIFGFYAQSTSCSYATAAAAEEIVTASSEEDDEIRELV 120
Query: 104 GGANEVKQMVKKEVKGKPLLDRKAKY---KDTMLRKRQVKMETEAWEEAAKEYQELLEDI 160
N+++++ + ++ K ++ A + +LRKRQ+K+ETEAW EAA+EYQELL D+
Sbjct: 121 DEINKLERVKPQSIRRKEPINMVAGMTAGRYNVLRKRQIKVETEAWNEAAREYQELLADM 180
Query: 161 CEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITM 220
CEQKL PNLPYMKSLFLGWFEPLK AI A QE CK + + F++LPAD MAVITM
Sbjct: 181 CEQKLAPNLPYMKSLFLGWFEPLKDAIKAHQEACKVGRNRPLYGECFDELPADMMAVITM 240
Query: 221 HKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGE 280
HKLMGLLMT +G G VI AA QIGEA+E EA+I
Sbjct: 241 HKLMGLLMTG-SGNGGTTVIQAATQIGEAVEQEAKIRKFLEKSKK--------------- 284
Query: 281 FYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEA 340
A N D ++L+K+QK+ QV I++G DD KPW Q+
Sbjct: 285 --KPATNNNDEDDSAKAQQRLAKKV------TTLMKKQKISQVREIVRGQDDSKPWSQDN 336
Query: 341 RAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR-YGIIEC 399
+ KVGC+++QLL ETAYIQ P QL PPDIRPAF HT KT +SQK +RR YG+IEC
Sbjct: 337 QVKVGCKLIQLLAETAYIQPPADQLADGPPDIRPAFIHTQKTVCKESQKGLRRRYGVIEC 396
Query: 400 DPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKR- 458
DPLV +GLEK+A++MVIPY+PML+PP NWT YDKGAYL+LPSY+MRTHG KQQ +A+KR
Sbjct: 397 DPLVRRGLEKTARHMVIPYMPMLIPPLNWTGYDKGAYLYLPSYIMRTHGVKQQRDAIKRV 456
Query: 459 APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXX 518
A N L +FEALD+LGNTKWR+N+++L +I +IW SGG LADLVDR+D+
Sbjct: 457 ARDNNLCTVFEALDTLGNTKWRVNKKVLSIIDRIWASGGCLADLVDREDMPLPGEPDTDD 516
Query: 519 XXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMH 578
I+KWK +VK + K+N ERHSQRC+ ELKLAVARKMK+E+GFYYPHN+DFRGRAYPMH
Sbjct: 517 AEEIKKWKWKVKHVKKDNAERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMH 576
Query: 579 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLD 638
P+LNHLGSDLCRGILEFAEGRPLGKSGL WLK+H+ANLYAGGVDKL YE RVAFTEN LD
Sbjct: 577 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKVHVANLYAGGVDKLSYEGRVAFTENRLD 636
Query: 639 DVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQ 698
DVFDSADRPLEGRRWWL AEDP QCLAACINL++ALRS +PE +SH+P+H DGSCNGLQ
Sbjct: 637 DVFDSADRPLEGRRWWLTAEDPFQCLAACINLTDALRSSSPEDYLSHIPIHQDGSCNGLQ 696
Query: 699 HYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXX 758
HYAALGRDKLGA AVNLV G +PADVYSGIA+RV EIMR DAEKDP
Sbjct: 697 HYAALGRDKLGAEAVNLVAGGKPADVYSGIAARVFEIMRGDAEKDPSIEPNAFHAKLLLN 756
Query: 759 QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEE 818
QVDRKLVKQTVMTSVYGVTY+G RDQIKRRLKER AI DD++LF+ASCYAAKTT+TALEE
Sbjct: 757 QVDRKLVKQTVMTSVYGVTYIGVRDQIKRRLKERDAIVDDNDLFAASCYAAKTTMTALEE 816
Query: 819 MFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE 878
MFEAARSIM WL DCAK+IAS N+P RW+TP+GLP VQPYR GR ++KTSLQVL+LR +
Sbjct: 817 MFEAARSIMGWLGDCAKIIASENQPARWSTPLGLPVVQPYRNHGRRLVKTSLQVLTLRCD 876
Query: 879 TDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRI 938
TDKV+ KRQ TAFPPNFVHSLDGSHMMMTA+ACKKAG++FAGVHDSYWTHACDVD+MN+I
Sbjct: 877 TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGMNFAGVHDSYWTHACDVDKMNQI 936
Query: 939 LREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LREKFVELYE PILENLLESFQ+SFP L FPPLPERGDFDLREVL S YFFN
Sbjct: 937 LREKFVELYEQPILENLLESFQESFPTLQFPPLPERGDFDLREVLESPYFFN 988
>M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000719mg PE=4 SV=1
Length = 1024
Score = 1238 bits (3202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1017 (61%), Positives = 749/1017 (73%), Gaps = 55/1017 (5%)
Query: 1 MWAHLAKRTFQRN--FKLPSYSPSTRFSQHSNFLEKIL----QPRNQSTCPVSGSAQVG- 53
+W + AK+ R F + S S S +S E + +P S+C ++VG
Sbjct: 36 VWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSEVGF 95
Query: 54 -----VFTSINELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANE 108
+ + + + + +F P N +GYASVAEA VSS+D EE+ S
Sbjct: 96 RGKGAISSPEDCMCKPSFWSVRNPIWFNGFC--PKGYASVAEA-VSSTDVEEEVSVVDEV 152
Query: 109 VKQMVKKEVKGKPLLDRKAKYKDT---------------MLRKRQVKMETEAWEEAAKEY 153
+ + + ++ K R+A+YK ML++RQ+K+ETEAWE AAKEY
Sbjct: 153 QELLQQMSIEEK----REAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEY 208
Query: 154 QELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPAD 213
+EL+ D+CEQKL PNLPYMKSLFLGWFEPL++AI EQ++C+K K +APY + LPAD
Sbjct: 209 RELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPAD 268
Query: 214 KMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXX 273
M+VITMHKLMGLLMT G RV+ AA IGEAIE E RI
Sbjct: 269 MMSVITMHKLMGLLMTGGEH-GTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDK--- 324
Query: 274 XEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDW 333
++ +GE A E KL+ ++L+K+QK++ V GI+ D
Sbjct: 325 -DQENGESDAAKKEREKLN----------------KKVTNLMKKQKLKAVRGIVSKHDAS 367
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
K W EARAKVG R+++LL +TA+IQ P QL PPDIRPAF HTF+T D++ RR
Sbjct: 368 KSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRR 427
Query: 394 YGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC 453
YG+IECDPLV KGLEK+A++MVIPY+PMLVPP NWT YDKG Y FLPSYVMR HGA+QQ
Sbjct: 428 YGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQR 487
Query: 454 EAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXX 513
EA+KR P QLEP+F+ALD+LGNT+WR+N+R+L V+ +IW SGG LADLVDR+DV
Sbjct: 488 EAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEE 547
Query: 514 XXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGR 573
++KWK +VK++ KEN ERHSQRC+ ELKLAVARKMK+E+GFYYPHN+DFRGR
Sbjct: 548 PDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGR 607
Query: 574 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFT 633
AYPMHPYLNHLGSD+CRGILEF EGRPLGKSGL WLKIHLANLYAGGVDKL E R+AFT
Sbjct: 608 AYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFT 667
Query: 634 ENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGS 693
ENHLDD+FDS D+PLEGRRWWL+AEDP QCLA CINL+EALRS +PET ISH+PVH DGS
Sbjct: 668 ENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGS 727
Query: 694 CNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXX 753
CNGLQHYAALGRDKLGAA+VNLV G++PADVYSGIA RVLEIMR+DA+KDP
Sbjct: 728 CNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRA 787
Query: 754 XXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTL 813
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER +I DD+E+F +CYAAK TL
Sbjct: 788 KLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITL 847
Query: 814 TALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVL 873
TAL EMFEAAR IMSWL +CAK+IAS N+PVRWTTP+GLP VQPYR+ GR +IKTSLQVL
Sbjct: 848 TALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVL 907
Query: 874 SLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVD 933
+L+RET+KV+VKRQ TAFPPNFVHSLD SHMMMTA+ACKKAGL FAGVHDSYWTHACDVD
Sbjct: 908 TLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVD 967
Query: 934 EMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
EMN+ILREKFV+LYE PILENLLESFQ+SFP L FPPLPERGDFDLR+VL S YFFN
Sbjct: 968 EMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024
>I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI4G08880 PE=3 SV=1
Length = 959
Score = 1231 bits (3186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/862 (68%), Positives = 691/862 (80%), Gaps = 21/862 (2%)
Query: 130 KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVA 189
K LR+RQV++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+A
Sbjct: 118 KYAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIA 177
Query: 190 EQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEA 249
EQE+ + + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA
Sbjct: 178 EQELVGERGARASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEA 236
Query: 250 IENEARIXX-XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
IE+E RI E D + A E +L
Sbjct: 237 IEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDI---AKEQQRLR---------------- 277
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D +PWGQ+A AKVG R+++LLIETA+IQ PVSQ S
Sbjct: 278 KKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSADS 337
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PDIRPAF H +T + QK RRYG+I+CDPL+ +GL+++AK+MVIPY+PML+PP +W
Sbjct: 338 TPDIRPAFTHEMRTVTREQQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISW 397
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ EAVK+AP Q++ IFEALD+LG+TKWRIN+++L +
Sbjct: 398 TGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSI 457
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV ++KW+ ++++ KEN+ERHSQRC++EL
Sbjct: 458 VDRIWSSGGRLADLVDRTDVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVEL 517
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG SGL W
Sbjct: 518 KLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCW 577
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSA+RPLEG+RWWL AEDP QCLA C+
Sbjct: 578 LKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCM 637
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
+L+EALRS +PE ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSGI
Sbjct: 638 DLTEALRSSSPEAMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGI 697
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIMR+DA+KDP + QVDRKLVKQTVMTSVYGVTYVGAR+QIKRR
Sbjct: 698 ATRVVEIMRRDAQKDPALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 757
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I DDSELF+ASCYAAK TLTAL EMFEAARSIM+WL DCAKVIA NEPVRW T
Sbjct: 758 LKERGVIGDDSELFAASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMT 817
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 818 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 877
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VAC K GL FAGVHDSYWTHACDVD MN+ILREKFVELY+APILENLL+SF+ SFP L F
Sbjct: 878 VACNKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLDSFETSFPTLRF 937
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFDL +VL S YFFN
Sbjct: 938 PPLPERGDFDLNDVLQSPYFFN 959
>Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=1
Length = 1005
Score = 1229 bits (3179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/858 (68%), Positives = 695/858 (81%), Gaps = 22/858 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQ+++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFL WFEPL+ I+AEQE+
Sbjct: 169 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLSWFEPLRDQIIAEQEL 228
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
+ + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA+E+E
Sbjct: 229 VSERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAVEHE 287
Query: 254 ARIXX-XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXS 312
RI E D + A E +L +
Sbjct: 288 VRIHKFLEKTKKKNTKEVDKVVEAVDADI---AKEQERLR----------------KKVT 328
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
L+K+QK++QV ++K D +PWGQ+A AKVG R+++L IETA+IQ P SQ G S P+I
Sbjct: 329 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEI 388
Query: 373 RPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYD 432
RPAF H +T +A Q+ RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP NWT YD
Sbjct: 389 RPAFTHEMRT-VAREQRKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYD 447
Query: 433 KGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQI 492
KGA+LFLPSYVMRTHGA+QQ EAVK+AP Q++ IFEALD+LG+TKWR+N+ +L ++ +I
Sbjct: 448 KGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKEVLSIVDRI 507
Query: 493 WTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
W+SGGRLADLVDR DV ++KW+ +++ KEN+ERHSQRC++ELKLAV
Sbjct: 508 WSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAEKENSERHSQRCDVELKLAV 567
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
ARKMKEE GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIH
Sbjct: 568 ARKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIH 627
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
LANLY GGVDKL Y+ R+AFTENHLDD+FDSA+RPLEG+RWWLEAEDP QCLA C++L+E
Sbjct: 628 LANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNE 687
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
ALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSGIA+RV
Sbjct: 688 ALRSPSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARV 747
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
+EIM++DA+KDP ++ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKER
Sbjct: 748 VEIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKER 807
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
I DDSELF ASCYAAK TLTAL EMFEAARSIM+WL DCAKVIA NEPVRWTTP+GL
Sbjct: 808 GVIADDSELFGASCYAAKVTLTALGEMFEAARSIMTWLGDCAKVIACENEPVRWTTPLGL 867
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACK 912
P VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 868 PVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 927
Query: 913 KAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLP 972
K GL FAGVHDSYWTHACDVD MN+ILREKFVELY+APILENLLESF+ SFPKL FPPLP
Sbjct: 928 KQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPLP 987
Query: 973 ERGDFDLREVLNSQYFFN 990
ERG+FD+++VL S YFFN
Sbjct: 988 ERGNFDMKDVLQSTYFFN 1005
>E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm2
PE=3 SV=1
Length = 990
Score = 1227 bits (3174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/926 (64%), Positives = 712/926 (76%), Gaps = 55/926 (5%)
Query: 83 RGYASVAEAIVSSSDTEEDCSGGANEVKQMVK-------KEVKGKPLLDRKAKY------ 129
+G+ASVAEA+ S T+ED S E+K +V+ KE +G+ R+ K+
Sbjct: 102 QGFASVAEAV---SSTDEDTSA-IEEIKGLVERFSEEVFKEKEGEFRGKRRTKFGNLGYA 157
Query: 130 KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVA 189
K L++RQ+K+ETEAWE+AAKEY+EL+ D+C+ KL NLPY+KSLFLGWFEPL+ I +
Sbjct: 158 KYNALKRRQIKIETEAWEQAAKEYKELMMDMCKNKLAXNLPYIKSLFLGWFEPLRDRIAS 217
Query: 190 EQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEA 249
EQE C++ + + PY N LPA+ MAVITMHKL+GL+MT+ + GCARV+ AA +IG+A
Sbjct: 218 EQEACRRGKCRAAYGPYLNRLPAEMMAVITMHKLVGLMMTSGDH-GCARVVQAACRIGDA 276
Query: 250 IENEARIXXXXXXXXXXXXXXXXXXEEPDG-----EFYHAAIENGKLSDXXXXXXXXXXX 304
IENE+RI EEP+ EF + N
Sbjct: 277 IENESRIHSFLEKTKKKHARGNMAEEEPETVTKEKEFLRKKVTN---------------- 320
Query: 305 XXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQ 364
LIK+QK++QV ++KG DD PWG EA AKVGC +++LLIETAYIQ P+ Q
Sbjct: 321 ---------LIKKQKLRQVTKLVKGKDDSAPWGVEAHAKVGCHLIELLIETAYIQPPLDQ 371
Query: 365 LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
PPDIRPAF+H+ + + + RRYG+IECDPLV KGL+K+A++ VIPY+PMLVP
Sbjct: 372 TVDGPPDIRPAFRHSLRNVSKEQSSNSRRYGVIECDPLVRKGLDKTARHTVIPYMPMLVP 431
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P WT YDKGA+LFLPSY+MRTHG++QQ EAVKR P QL+ IFEALD+LG+TKWRIN+R
Sbjct: 432 PLCWTGYDKGAHLFLPSYIMRTHGSRQQREAVKRTPTQQLQSIFEALDTLGSTKWRINKR 491
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
LL V+ +IW SGG LA LVD +D +RKWK ++ KEN+E+HSQRC
Sbjct: 492 LLAVVERIWASGGNLAGLVDCEDAPLPEKPDTEDEAVLRKWKWSLRNTKKENSEKHSQRC 551
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMKEE+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS
Sbjct: 552 DVELKLSVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 611
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GLRWLKIHLANLYAGGVDKL Y+ R+AF ENHLDD+FDSAD+PLEG RWWL AEDP QCL
Sbjct: 612 GLRWLKIHLANLYAGGVDKLSYDGRLAFVENHLDDIFDSADKPLEGSRWWLGAEDPFQCL 671
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AACINLSEALRS +P+TTISHVPVH DGSCNGLQHYAALGRDKLGAA+VNLV G++PADV
Sbjct: 672 AACINLSEALRSSSPDTTISHVPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADV 731
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YSGIAS VLEIMR+D++KDP N QVDRKLVKQTVMTSVYGVTY+GARDQ
Sbjct: 732 YSGIASGVLEIMRRDSQKDPANNPSAVRARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQ 791
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IK+RLKER I +D ++F A+CYAAKTTL ALEEMF+AAR IMSWL DCAKVIAS NE V
Sbjct: 792 IKKRLKERDVIPED-QVFGAACYAAKTTLAALEEMFQAARGIMSWLGDCAKVIASENESV 850
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RWTTP+GLP VQPY++ GR + VL+L++ETDKV++KRQ TAFPPNFVHSLDGSHM
Sbjct: 851 RWTTPLGLPVVQPYKKQGRCL------VLALQKETDKVMIKRQRTAFPPNFVHSLDGSHM 904
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTA+ACKK GL+FAGVHDSYWTHACDVDEMNRILR+KFVELYE PILENLLES+QKSFP
Sbjct: 905 MMTAIACKKIGLNFAGVHDSYWTHACDVDEMNRILRKKFVELYEQPILENLLESYQKSFP 964
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
KL+FPPLP+RGDFDL+EVL S YFF
Sbjct: 965 KLSFPPLPDRGDFDLKEVLKSPYFFQ 990
>Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) OS=Hordeum
vulgare GN=rpoTm PE=2 SV=1
Length = 862
Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/857 (68%), Positives = 692/857 (80%), Gaps = 21/857 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQ+++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+AEQE+
Sbjct: 27 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQEL 86
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
+ + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA+E+E
Sbjct: 87 VGERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAVEHE 145
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
RI EP SD +
Sbjct: 146 VRIHKFLEKTKKKNTKEVDKVVEPGD------------SDIAKEQQLLRKKV------TD 187
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L+K+QK++QV ++K D +PWGQ+A AKVG R+++L IETA+IQ P SQ G S P+IR
Sbjct: 188 LMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIR 247
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAF H +T +A QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP NWT YDK
Sbjct: 248 PAFTHEMRT-VAREQKS-RRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDK 305
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
GA+LFLPSYVMRTHGA+QQ EAVK+AP Q++ IFEALD+LG+TKWR+N+R+L ++ +IW
Sbjct: 306 GAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRIW 365
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+SGGRLADLVDR DV ++KW+ +++ KEN+ERHSQRC++ELKLAVA
Sbjct: 366 SSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVA 425
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKMKEE GFY+PHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHL
Sbjct: 426 RKMKEEVGFYHPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHL 485
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
ANLY GGVDKL Y+ R+AFTENHL+D+FDSA+RPLEG+RWWLEAEDP QCLA C++L+EA
Sbjct: 486 ANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEA 545
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
LRS +PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSGIA+RV+
Sbjct: 546 LRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVV 605
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
EIM++DA+KDP ++ QVDR+LVKQTVMTSVYGVTYVGAR+QIKRRLKER
Sbjct: 606 EIMKRDAQKDPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKERG 665
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I DDSELF ASCYAAK TLTAL EMFEAARSIM+WL DCAKVIA NEPVRW TP+GLP
Sbjct: 666 VIADDSELFGASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWKTPLGLP 725
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACKK
Sbjct: 726 VVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKK 785
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
GL FAGVHDSYWTHACDVD MN+ILREKFVELY+APILENLLESF+ SFPKL FPPLPE
Sbjct: 786 QGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPLPE 845
Query: 974 RGDFDLREVLNSQYFFN 990
RG+FD+++VL S YFFN
Sbjct: 846 RGNFDMKDVLQSTYFFN 862
>E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm1
PE=3 SV=1
Length = 996
Score = 1223 bits (3165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/929 (63%), Positives = 710/929 (76%), Gaps = 37/929 (3%)
Query: 75 LNSSLKL----ARGYASVAEAIVSSSD---TEEDCSGGANEVKQMVKKEVKGKPLLDRKA 127
+N+S + +G A+VAEA+ S+ + E+ G E+ + V ++ G+ K
Sbjct: 92 MNASFRCRVGSVQGLANVAEAVASTDEDVSAIEEIQGLLEELSEEVARQKTGEFDAKNKP 151
Query: 128 KYKDTML------RKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFE 181
+ D ++RQ+K+ETEAWE+AA+EY+EL D+C+QKL PNLPYMKSLFLGWFE
Sbjct: 152 NFGDLGFGKYKAQKRRQIKIETEAWEQAAREYRELFVDMCKQKLAPNLPYMKSLFLGWFE 211
Query: 182 PLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
PL+ I AEQE +K + +A Y + LPAD +AVITMHKLMGL+MT+ N GCARV+
Sbjct: 212 PLRDRIAAEQESYRKGKSRAAYARYIDHLPADMVAVITMHKLMGLMMTS-NDNGCARVVQ 270
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
AA QIGEAIENEARI EP+ K++
Sbjct: 271 AACQIGEAIENEARIHRFLEKTKKKPANANKAEAEPEAVTKEKEFLRKKVT--------- 321
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSP 361
SLIK+QK++QV I+KG DD +PWG E AKVGCR+++LL++ I +P
Sbjct: 322 -----------SLIKKQKLRQVTKIVKGKDDSEPWGTEGHAKVGCRLIELLMKP-LISAP 369
Query: 362 VSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPM 421
+ Q AF+H+ ++ Q + RRYG+IECDPLV KGL+++A++MVIPY+PM
Sbjct: 370 LDQTADGHL-YSSAFRHSLRSPSNHQQNNSRRYGVIECDPLVRKGLDRTARHMVIPYMPM 428
Query: 422 LVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRI 481
LVPP WT YDKGA+LFLPSYVMRTHGA+QQ EAVK AP QL+ +FEALD+LG+TKWR+
Sbjct: 429 LVPPLGWTGYDKGAHLFLPSYVMRTHGARQQREAVKSAPRKQLQSVFEALDTLGSTKWRV 488
Query: 482 NQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHS 541
N+R+L V+ +IW SGG LA LVD DV +RKWK ++ KEN+ER+S
Sbjct: 489 NKRVLAVVDRIWASGGHLAGLVDCQDVPLPEKPDTEDEAVLRKWKWSLRNARKENSERYS 548
Query: 542 QRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPL 601
QRC++ELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPL
Sbjct: 549 QRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPL 608
Query: 602 GKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPL 661
GKSGL WLKIH+ANLYAGG+DKL Y+ R+AF ENHLDD+FDS+DRPLEG RWWL AEDP
Sbjct: 609 GKSGLHWLKIHVANLYAGGIDKLSYDGRLAFVENHLDDIFDSSDRPLEGSRWWLGAEDPF 668
Query: 662 QCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRP 721
QCLAACINLS+ALRS +PETTISHVP+H DGSCNGLQHYAALGRDKLGAAAVNLV G++P
Sbjct: 669 QCLAACINLSDALRSSSPETTISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 728
Query: 722 ADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGA 781
ADVYSGIA RV +IMR+D++KDP N QVDRKLVKQTVMTSVYGVTY+GA
Sbjct: 729 ADVYSGIAERVFDIMRRDSQKDPTNNPSAARARLLIDQVDRKLVKQTVMTSVYGVTYIGA 788
Query: 782 RDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTN 841
RDQIKRRLKER AI DD ++F A+CYAAKTTLTALEEMF+AAR+IMSWL DCAKVIAS N
Sbjct: 789 RDQIKRRLKERDAIPDD-QVFGAACYAAKTTLTALEEMFQAARAIMSWLGDCAKVIASEN 847
Query: 842 EPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDG 901
EPVRWTTP+GLP VQPY++ GR ++KTSLQVL+L+RETDKV++KRQ TAFPPNFVHSLDG
Sbjct: 848 EPVRWTTPLGLPVVQPYKKKGRCLVKTSLQVLALKRETDKVMIKRQRTAFPPNFVHSLDG 907
Query: 902 SHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQK 961
SHMMMTAVACKKAGL FAGVHDSYWTHACDVDE+NRILREKFVELYE PILENLLE FQK
Sbjct: 908 SHMMMTAVACKKAGLKFAGVHDSYWTHACDVDEINRILREKFVELYEQPILENLLEGFQK 967
Query: 962 SFPKLNFPPLPERGDFDLREVLNSQYFFN 990
SFPK +FPPLP+RGDFDL+EVL S YFFN
Sbjct: 968 SFPKFSFPPLPDRGDFDLKEVLQSTYFFN 996
>K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1046
Score = 1220 bits (3156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/897 (68%), Positives = 703/897 (78%), Gaps = 31/897 (3%)
Query: 105 GANEVKQMVKKEVKGKPLLDR---------KAKYKDTMLRKRQVKMETEAWEEAAKEYQE 155
G E+ Q +KKE + K + R +++Y++ LR+RQVK+ETE WEEAAKEY+E
Sbjct: 170 GIQELLQGMKKEKQKKVVGYRWKNQGKGVGQSRYQE--LRRRQVKIETEMWEEAAKEYRE 227
Query: 156 LLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKM 215
LL D+CE KL PNLPYMKSLFLGWFEPL+ AIV EQE+ + +M +APYF LPADKM
Sbjct: 228 LLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKEQEMYSEGKNRMAYAPYFVQLPADKM 287
Query: 216 AVITMHKLMGLLMTNHN--GIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXX 273
AVI MHKLMGLLMT + IG ARV+ AA IG+AIENE RI
Sbjct: 288 AVIAMHKLMGLLMTGNERVTIGTARVVQAACGIGDAIENEVRIHKFLEKTKKKKGDRSNK 347
Query: 274 XEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDW 333
+ GE E KL L+K+QK+ V G++KG DD
Sbjct: 348 NKA--GESVADIKEEQKLRKKVI----------------DLMKKQKLVAVRGLVKGKDDT 389
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
KPWG + KVG R+++LL++TAYIQ P QL + PDIRPAF H+FKT +S K RR
Sbjct: 390 KPWGAVIKTKVGSRLIELLLQTAYIQPPSDQLPDAAPDIRPAFVHSFKTVTKESIKASRR 449
Query: 394 YGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC 453
YGII+CDPL+ KGLE++AKNMVIPY+PMLVPP NWT YDKG +LFLPSYVMRTHG +QQ
Sbjct: 450 YGIIQCDPLILKGLERTAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQR 509
Query: 454 EAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXX 513
EAVKRAP QLEP+FEALD+LG+TKWR+N+++L V+ +IW SGGR+ADLVDRDDV
Sbjct: 510 EAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPLPDE 569
Query: 514 XXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGR 573
I+KWK + K++ KEN ER+SQRC+IELKLAVARKMK+E+GFYYPHN+DFRGR
Sbjct: 570 PDTDDEAKIKKWKWKYKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 629
Query: 574 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFT 633
AYPMHP+LNHLGSDLCRGILEFAEGR LGKSGLRWLKIHLANLYAGGVDKL YE R+AFT
Sbjct: 630 AYPMHPHLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYEGRLAFT 689
Query: 634 ENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGS 693
ENH +D+FDSAD+PLEGRRWWL+AEDPLQCLA CI L+EALRS +PET ISH+PVH DGS
Sbjct: 690 ENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFISHIPVHQDGS 749
Query: 694 CNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXX 753
CNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA+RV IM++DA+KDP
Sbjct: 750 CNGLQHYAALGRDKLGAAAVNLVTGEKPADVYSGIAARVSNIMQRDAQKDPAVFRDALHA 809
Query: 754 XXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTL 813
QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER AI DD ELF ASCYAAK TL
Sbjct: 810 RTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDKELFGASCYAAKVTL 869
Query: 814 TALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVL 873
TALEEMF+ AR IMSWL DCAKVIAS N+PVRWTTP+GLP VQPYR++G+ IIKTSLQ+L
Sbjct: 870 TALEEMFQGARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKHIIKTSLQIL 929
Query: 874 SLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVD 933
+L+RETDKV+V RQ TAFPPNFVHSLDGSHMMMTAVACKK GL FAGVHDSYWTHACDVD
Sbjct: 930 TLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLSFAGVHDSYWTHACDVD 989
Query: 934 EMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+MNRILREKFVELYE P+LENLLESFQ SFP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 990 KMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLKEVLESPYFFN 1046
>M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 963
Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/1007 (60%), Positives = 748/1007 (74%), Gaps = 61/1007 (6%)
Query: 1 MWAHLAK--RTFQRNFKLPSYSPS-----TRF---SQHSNFLEK--ILQPRNQSTCPVSG 48
MW ++A+ + RN +L S PS T F Q S + EK IL P +T P+
Sbjct: 1 MWRNIARTASSASRNLRLSSNRPSPLPATTGFLSCFQDSIWCEKSRILDP---ATPPLVT 57
Query: 49 SAQVGVFTSINE-----LGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCS 103
F E LG N + E ++ + +R +ASVAEA VSS+D +ED S
Sbjct: 58 RLFDAGFWQKGESLPKTLGHVNSLIME----VSGVPRNSRSFASVAEA-VSSTDADEDTS 112
Query: 104 GGANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQ 163
+++M + LLD + K TMLR+RQ+++ETEAWE AAKEY+ELL D+CE+
Sbjct: 113 ----TIEEMQR-------LLDAE---KYTMLRRRQIQIETEAWETAAKEYKELLMDMCER 158
Query: 164 KLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKL 223
KL PNLPYMKSLFLGWFEP + IVAEQ + K ++ YF+ LPA+ +AVITMHKL
Sbjct: 159 KLAPNLPYMKSLFLGWFEPFRDKIVAEQGQSM-AKNKFSYQHYFSQLPAEMVAVITMHKL 217
Query: 224 MGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYH 283
+ LLMT G RV+ A Q+GEAIE EARI E
Sbjct: 218 VSLLMTGGES-GGVRVVQAVCQVGEAIEQEARIHRFLEKTRKKTSKDQTSDE-------- 268
Query: 284 AAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAK 343
+E G ++ + L+K+QK+QQV I++G D KPWGQ+A+ K
Sbjct: 269 --VEGGAVT---------KEEQILRKKVTDLMKKQKVQQVRKIVRGQDVSKPWGQDAQVK 317
Query: 344 VGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLV 403
VG R+++L +ETA+IQ PVSQ PPDIRPAF+ + ++ Q +RYGIIECDPLV
Sbjct: 318 VGSRLIELFMETAFIQPPVSQSADGPPDIRPAFRRVIRI-VSSEQLKTKRYGIIECDPLV 376
Query: 404 TKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQ 463
+GL+++A++MVIPY+PML+PP NW YD+GA+L LPSY+MR HGA+QQ EA+KRAP Q
Sbjct: 377 RQGLDRTARHMVIPYMPMLMPPLNWKGYDRGAHLILPSYIMRIHGARQQREALKRAPKKQ 436
Query: 464 LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIR 523
++ +F+ALD+LG TKWR+N+R+L ++ +IW+SGGRLADLVDR+D+ +R
Sbjct: 437 MQAVFQALDTLGCTKWRVNKRVLSIVDRIWSSGGRLADLVDREDIPLPEKPDTEDESELR 496
Query: 524 KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNH 583
KWK +++++ KEN+ERHS+RC++ELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNH
Sbjct: 497 KWKWKMRSVKKENSERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 556
Query: 584 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDS 643
LGSDLCRGILEFAEGRPL KSGLRWLKIHLANLYAGGVDKL Y+ R+AFTENH++D+FDS
Sbjct: 557 LGSDLCRGILEFAEGRPLMKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTENHVEDIFDS 616
Query: 644 ADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAAL 703
ADRPLEGRRWWL AEDP QCLA CINL+EALRS +PETTISH+PVH DGSCNGLQHYAAL
Sbjct: 617 ADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHIPVHQDGSCNGLQHYAAL 676
Query: 704 GRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRK 763
GRDKLGA AVNLV GD+PADVYSGIA+RVL+IMR+D++KDP + QVDRK
Sbjct: 677 GRDKLGAIAVNLVAGDKPADVYSGIAARVLDIMRRDSQKDPAEDPNALLARLIVDQVDRK 736
Query: 764 LVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAA 823
LVKQTVMTSVYGVT++GAR+QIK+RLKER DD ELF AS YAA+TTLTALEEMFEAA
Sbjct: 737 LVKQTVMTSVYGVTFIGAREQIKKRLKERGVTADDRELFGASSYAARTTLTALEEMFEAA 796
Query: 824 RSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVL 883
R IM+WL DCAKVIA+ N VRWTTP+GLP VQPYR +G+ I+KTSLQVL+L+RETDKV+
Sbjct: 797 RKIMNWLGDCAKVIATENHSVRWTTPLGLPVVQPYRALGKHIVKTSLQVLTLQRETDKVM 856
Query: 884 VKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
V+RQ TAFPPNFVHSLDGSHMMMTAVAC+KAGL FAGVHDSYWTHACDVD+MNRILREKF
Sbjct: 857 VRRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLIFAGVHDSYWTHACDVDQMNRILREKF 916
Query: 944 VELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
VELYE PILENLLESFQ +FP L FP LPERGDF+L++VL+S YFFN
Sbjct: 917 VELYEKPILENLLESFQIAFPTLTFPELPERGDFNLKDVLDSPYFFN 963
>Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays GN=rpoT1 PE=2
SV=1
Length = 975
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/862 (66%), Positives = 686/862 (79%), Gaps = 19/862 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
++ T LR+RQ+++ETEAWE+AA EY+ELL D+CEQKL PNLPY+KSLFLGWFEPL+ I
Sbjct: 133 HRYTSLRRRQIRIETEAWEQAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIA 192
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
EQE+ + +H P+F+ LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 193 TEQELVADPGSRASHGPFFSMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 251
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE + A+E +L
Sbjct: 252 AIEHEVRINRFLEKTRKKNNKEMENEEEAGDT--NIAVEQQRLR---------------- 293
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D +PWGQ+A AKVG R++ L I TA+IQ P SQ
Sbjct: 294 KKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDG 353
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PDIRPAF+H +T + + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP W
Sbjct: 354 LPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICW 413
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ +AVKRAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 414 TGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSI 473
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW++GGRLADLVDR DV ++ WK ++ K+N+ERHSQRC++EL
Sbjct: 474 VDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVEL 533
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRW
Sbjct: 534 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 593
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYA GVDKL Y+ R+AF ENHL+++FDSADRPLEGRRW L AEDP QCLA C+
Sbjct: 594 LKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRPLEGRRWRLGAEDPFQCLAVCM 653
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRS +PETTISH+PVH DGSCNGLQHYAALG+DKLGA AVNLV G++PADVY+GI
Sbjct: 654 NLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGI 713
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIMR DA+KDP QVDRKLVKQTVMTSVYGVTY+GAR+QI+RR
Sbjct: 714 ANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRR 773
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I +DSELF ASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWTT
Sbjct: 774 LKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 833
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 834 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTA 893
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VACK+ GL+FAGVHDSYWTHA DVD MN+ILREKFVELY+ PILENLLESF+KSFPKL F
Sbjct: 894 VACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKF 953
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFD++EVL S YFFN
Sbjct: 954 PPLPERGDFDMKEVLESTYFFN 975
>F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=MGP3 PE=2 SV=1
Length = 983
Score = 1216 bits (3146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1012 (58%), Positives = 723/1012 (71%), Gaps = 51/1012 (5%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTSINE 60
MW ++ R R K S S S+ N + IL S+ +SG +NE
Sbjct: 1 MWRNILGRASLRKVKFLSDSSSSGTHYPVNRVRGIL-----SSVNLSGVRNGLSINPVNE 55
Query: 61 LGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGK 120
+G S F + + GYA+ A+AI S+ ED S G++EV +++ + K
Sbjct: 56 MG--GLSSFRH-----GQCYVFEGYATAAQAIDSTD--PEDESSGSDEVNELITEMEKET 106
Query: 121 PLLDRKAKY---------------KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKL 165
+ +KA+ K ML++RQVKMETE WE AA+E +E+L D+CEQKL
Sbjct: 107 ERIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILADMCEQKL 166
Query: 166 VPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMG 225
PNLPYMKSLFLGWFEP+++AI + + K K+ +AP+ LPADKMAVITMHK+MG
Sbjct: 167 APNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMG 226
Query: 226 LLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAA 285
LLMTN G+G ++++AA QIGEA+E E RI E
Sbjct: 227 LLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTE--------- 277
Query: 286 IENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVG 345
++ + L+++ K++QV +++ D +KPWGQEA+ KVG
Sbjct: 278 ------AENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVG 331
Query: 346 CRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTK 405
R++QLL+E AYIQ P Q PPDIRPAFK F+T ++ K RRYG IECDPLV K
Sbjct: 332 ARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLK 391
Query: 406 GLEKS-------AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKR 458
GL+KS A++MVIPYLPML+PP NWT YD+GA+ FLPSYVMRTHGAKQQ +KR
Sbjct: 392 GLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKR 451
Query: 459 APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXX 518
P QLEP++EALD+LGNTKW+IN+++L ++ +IW +GGR+ LVDR+DV
Sbjct: 452 TPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPERED 511
Query: 519 XXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMH 578
+ W+ + K +K+NNERHSQRC+IELKL VARKMK+E+GFYYPHNVDFRGRAYP+H
Sbjct: 512 QEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIH 571
Query: 579 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLD 638
PYLNHLGSDLCRGILEF EG+PLGKSGLRWLKIH+ANLYAGGVDKL YE R+AFTE+HL+
Sbjct: 572 PYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLE 631
Query: 639 DVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQ 698
D+FDS+DRPLEG+RWWL AEDP QCLAACINLSEALRSP PE ISH+P+H DGSCNGLQ
Sbjct: 632 DIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQ 691
Query: 699 HYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXX 758
HYAALGRDKLGA AVNLV G++PADVY+ IA+RVL+IM++DAE+DPET
Sbjct: 692 HYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLD 751
Query: 759 QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEE 818
QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER EDDS F ASCYAAK TL ALEE
Sbjct: 752 QVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEE 811
Query: 819 MFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE 878
MFEAAR+I SW DCAK+IAS N V WTTP+GLP VQPYR+ GR ++KT+LQVL+L RE
Sbjct: 812 MFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRE 871
Query: 879 TDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRI 938
TDKV+ +RQ TAF PNF+HSLDGSHMMMTAVAC +AGL FAGVHDS+WTHACDVD MN I
Sbjct: 872 TDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTI 931
Query: 939 LREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LREKFVELYE PILENLLESFQKSFP ++FPPLPERGDFDLR+VL S YFFN
Sbjct: 932 LREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 983
>M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004354 PE=3 SV=1
Length = 971
Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1005 (59%), Positives = 724/1005 (72%), Gaps = 49/1005 (4%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTSINE 60
MW ++ R R K+ +S ST S I C V +NE
Sbjct: 1 MWRNILGRATLR--KIKPFSDSTSASHFRGIFSSI-----DLGCGVRNRLPT---NPVNE 50
Query: 61 LGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGK 120
LGR L PF RG A+ A+ I S+D E+D S G++EV +++ K
Sbjct: 51 LGRLTSVLHNQPFAF-------RGLATAAQTI-DSTDPEDDSSSGSDEVNELMSAMEKET 102
Query: 121 PLLDRKAKY---------------KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKL 165
+ +KA+ K L++RQVK+ETE WE+AAKE QE++ED+CEQKL
Sbjct: 103 ERVRKKARLAAKQQMKVVAGMGAQKYYSLKQRQVKLETEEWEKAAKECQEIIEDMCEQKL 162
Query: 166 VPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMG 225
PNLPY+KSLFLGWFEPL+ AI A+ + K K+ +A Y LPAD MAVITMHK+MG
Sbjct: 163 APNLPYVKSLFLGWFEPLRDAIQADLDGFKVKKGKIPYASYMEQLPADMMAVITMHKMMG 222
Query: 226 LLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAA 285
LLMTN G+G +V++AA QIGEAIE EARI E D
Sbjct: 223 LLMTNAEGVGVVKVVNAATQIGEAIEQEARINSFMKKAKKKKNVVDDESEGVDASGEIDT 282
Query: 286 IENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVG 345
E KL ++L+K+ K++QV GI+K D +K WGQEA+ KVG
Sbjct: 283 KETLKLK----------------KQINTLLKKHKVRQVRGIVKAHDSFKSWGQEAQVKVG 326
Query: 346 CRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTK 405
R++QLL+ETAYIQ P Q PP+IRPAFK + +T +++K R+YG IECDPL+ K
Sbjct: 327 ARLIQLLMETAYIQPPAEQFDDGPPEIRPAFKQSSRTVTIENKKLSRKYGCIECDPLIRK 386
Query: 406 GLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLE 465
GL+KSA++MVIPYLPML+PP NWT YD+GA+ FLPSY+MRTHGAKQQ A+KR P QLE
Sbjct: 387 GLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYIMRTHGAKQQRVAIKRTPKAQLE 446
Query: 466 PIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKW 525
P+F+ALD+LGNTKWRIN+++L ++ +IW +GGR+ LVDRDD I++W
Sbjct: 447 PVFQALDTLGNTKWRINKKVLSLVDRIWANGGRVGGLVDRDDAPIPEEPDSEDQEEIKQW 506
Query: 526 KRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLG 585
K ++K KEN+ERHSQRC++ELKL VARKMK+E+GFY+PHNVDFRGRAYPMHPYLNHLG
Sbjct: 507 KWKMKEANKENSERHSQRCDVELKLEVARKMKDEEGFYFPHNVDFRGRAYPMHPYLNHLG 566
Query: 586 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSAD 645
SDLCRGILEF EG+PLG+SGLRWLKIH+ANLY GGVDK Y+ RVAFTE+HL+D+FDS+D
Sbjct: 567 SDLCRGILEFCEGKPLGESGLRWLKIHIANLYGGGVDKFAYKDRVAFTESHLEDIFDSSD 626
Query: 646 RPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGR 705
RPLEG+RW L AEDP QCLAAC+NLSEALRSP PE ISH+P+H DGSCNGLQHYAALGR
Sbjct: 627 RPLEGKRWRLNAEDPFQCLAACMNLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGR 686
Query: 706 DKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLV 765
D++GAAAVNL G++PADVY+ IA+RVL IMR+DAE+DPET QVDRKLV
Sbjct: 687 DQIGAAAVNLFTGEKPADVYADIAARVLNIMRQDAEEDPETFPNATYAKLMLDQVDRKLV 746
Query: 766 KQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARS 825
KQTVMTSVYGVTY GARDQIK+RLKER A DDS+ F ASCYAA+ TL ALEEMFEAAR+
Sbjct: 747 KQTVMTSVYGVTYSGARDQIKKRLKERGAFADDSQNFHASCYAARVTLKALEEMFEAARA 806
Query: 826 IMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK 885
IMSW +CAK+IAS N+ V WTTP+GLP VQPYR+ R ++KT+LQVL+L+RET+KV+ +
Sbjct: 807 IMSWFGECAKIIASQNKAVCWTTPLGLPVVQPYRKNERHLVKTTLQVLTLQRETEKVMAR 866
Query: 886 RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVE 945
+Q TAF PNFVHSLDGSHMMMTAVAC KAGL FAGVHDS+WTHACDV+ MN ILREKFVE
Sbjct: 867 KQMTAFAPNFVHSLDGSHMMMTAVACNKAGLSFAGVHDSFWTHACDVELMNNILREKFVE 926
Query: 946 LYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LY+ PILENLLESFQKSFP L FPPLPERGDFDLREV+ S YFFN
Sbjct: 927 LYDKPILENLLESFQKSFPGLTFPPLPERGDFDLREVIRSPYFFN 971
>D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476028 PE=3 SV=1
Length = 975
Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/960 (60%), Positives = 714/960 (74%), Gaps = 39/960 (4%)
Query: 53 GVFTSINELG-RSNFSLFEY-PFGLNSSLKLAR-----GYASVAEAIVSSSDTEEDCSGG 105
G+ +S+N +G R+ S+ FG SS + + GYA+ A+AI S+ ED S G
Sbjct: 33 GILSSVNLIGVRNGLSINPIDEFGGLSSFRYGQCYVFEGYATAAQAIDSTD--PEDESSG 90
Query: 106 ANEVKQMVKKEVKGKPLLDRKAKYKDT---------------MLRKRQVKMETEAWEEAA 150
++EV +++ + K + +KA+ T MLR+RQVKMETE WE AA
Sbjct: 91 SDEVNELITEMEKETERIRKKARLAATPPKRVIAGMGAQKYYMLRQRQVKMETEEWERAA 150
Query: 151 KEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDL 210
+E +E+L D+CEQKL PNLPYMK+LFLGWFEP+++AI A+ ++ K K+ +AP+ L
Sbjct: 151 RECREILADMCEQKLAPNLPYMKTLFLGWFEPVRNAIQADLDLFKIKKGKIPYAPFMEQL 210
Query: 211 PADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXX 270
PADKMAVITM+K+MGLLMTN G+G ++++AA QIGEA+E E RI
Sbjct: 211 PADKMAVITMNKMMGLLMTNVEGVGIVKLVNAATQIGEAVEQEVRINSFLQKNNKKNATG 270
Query: 271 XXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGL 330
+ E H + E + L+++ K+++V +++
Sbjct: 271 KTI----NTEAVHVSEET-----------VAKETEKARKRATVLMEKNKLREVKVLVRKH 315
Query: 331 DDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKD 390
D +KPWGQEA+ KVG R++QLLIE AYIQ P Q PPDIRPAFK F+T ++ K
Sbjct: 316 DSFKPWGQEAQVKVGARLIQLLIENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLENTKT 375
Query: 391 IRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK 450
RRYG IECDPLV KGL+KSA++MVIPYLPML+PP NWT YD+GA+LFLPS++MRTHGA
Sbjct: 376 SRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHLFLPSFIMRTHGAI 435
Query: 451 QQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXX 510
QQ ++R P QLEP+FEALD+LGNTKWRIN+++L ++ +IW +GGRL LVDR+DV
Sbjct: 436 QQRTVMRRTPKEQLEPVFEALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDREDVPV 495
Query: 511 XXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDF 570
+ WK + K +K+NNERHSQRC+IELKL VARKMK+E+GFYYPHNVDF
Sbjct: 496 PEEPEREDHEKFKNWKWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDF 555
Query: 571 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRV 630
RGRAYP+HPYLNHLGSDLCRGILEF EG+PLGKSGLRWLKIH+ANLYAGGVDKL YE R+
Sbjct: 556 RGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRI 615
Query: 631 AFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHM 690
AFTE+HL+D++DS+DRPLEG+RWWL AEDP QCLAACINLSEALRSP PE ISH+P+H
Sbjct: 616 AFTESHLEDIYDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQ 675
Query: 691 DGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXX 750
DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+ IA+RV +IM++DA++DPET
Sbjct: 676 DGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVFKIMQQDAKEDPETFPNA 735
Query: 751 XXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAK 810
QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER EDDS F A+CYAAK
Sbjct: 736 TYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHAACYAAK 795
Query: 811 TTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSL 870
TL ALEEMFEAAR+I SW DCAK+IAS N+ V WTTP+GLP VQPYR+ GR ++KT+L
Sbjct: 796 ITLKALEEMFEAARAIKSWFGDCAKIIASENKAVCWTTPLGLPVVQPYRKPGRHLVKTTL 855
Query: 871 QVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHAC 930
QVL+L RETDKV +RQ TAF PNF+HSLDGSHMMMTAVAC + GL FAGVHDS+WTHAC
Sbjct: 856 QVLTLSRETDKVAARRQMTAFAPNFIHSLDGSHMMMTAVACNRVGLSFAGVHDSFWTHAC 915
Query: 931 DVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
DV+ MN ILREKFVELYE PILENLLESFQKSFP ++FPPLPERGDFDLR+VL S YFFN
Sbjct: 916 DVEIMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLQSPYFFN 975
>R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10019728mg PE=4 SV=1
Length = 971
Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/1008 (59%), Positives = 726/1008 (72%), Gaps = 55/1008 (5%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPS-TRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTSIN 59
MW +L R R K S S S T F N + I+ S+ SG IN
Sbjct: 1 MWRNLLGRASLRKVKFLSDSSSGTHFP--VNRVRGII-----SSVNPSGVRNGLSINPIN 53
Query: 60 ELGRSNFSLFEYP--FGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEV 117
ELGR F F + +G GYA+ A+AI S+ ED S G++EV +++ +
Sbjct: 54 ELGR--FGSFRHGQCYGFE-------GYATAAQAIDSTD--PEDESSGSDEVNELMTEMG 102
Query: 118 KGKPLLDRKAKYKDT---------------MLRKRQVKMETEAWEEAAKEYQELLEDICE 162
K + +KA+ T ML++RQVKMETE WE+AA+E +E+L D+CE
Sbjct: 103 KETERILKKARLAATQPKRVIAGMGVQKYYMLKQRQVKMETEEWEKAARECREILADMCE 162
Query: 163 QKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHK 222
QKL PNLPY+K LFLGWFEPL++AI A+ + K K+ +AP+ LPAD M VITMHK
Sbjct: 163 QKLAPNLPYVKFLFLGWFEPLRNAIQADLDAFKIKKGKIPYAPFMEQLPADMMTVITMHK 222
Query: 223 LMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFY 282
+MGLLMTN G+G ++++AA QIGEA+E EARI + D E
Sbjct: 223 MMGLLMTNAEGVGIVKLVNAATQIGEAVEQEARIHSFMLKTKKKKNETEKTSND-DSEAV 281
Query: 283 HAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARA 342
E + L+K++K+++V ++K D +KPWGQEA+
Sbjct: 282 AKETERMR------------------KQVGVLMKKKKLREVKALVKKHDSFKPWGQEAQV 323
Query: 343 KVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPL 402
KVG R++QLL+E AYIQ P Q PPDIRPAFK TF+T ++ K RRYG IECD L
Sbjct: 324 KVGSRLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQTFRTVTLENTKTSRRYGCIECDSL 383
Query: 403 VTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN 462
V KGL+KSA++MVIPYLPML+PP NWT YD+GA+ FLPS++MRTHGAKQQ +K+ P
Sbjct: 384 VQKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSFIMRTHGAKQQRMVIKQTPKE 443
Query: 463 QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXI 522
QL+P+FEALD+LGNTKWRIN+++L ++ +IW +GGRL LVDR+DV +
Sbjct: 444 QLKPVFEALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDREDVPLPEEPVSEDQENV 503
Query: 523 RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLN 582
+ WK ++K KENNERHSQRC+IELKL VARKMK+E+GFYYPHNVDFRGRAYPMHPYLN
Sbjct: 504 KDWKWELKKANKENNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPMHPYLN 563
Query: 583 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFD 642
HLGSDLCRGILEF EG+PLGKSGLRWLKIH+ANLYAGGVDKL YE RVAFTE+HL+D+FD
Sbjct: 564 HLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRVAFTESHLEDIFD 623
Query: 643 SADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAA 702
++DRPLEG+RWWL+AEDP QCLAACI+LSEALRSP PE ISH+P+H DGSCNGLQHYAA
Sbjct: 624 TSDRPLEGKRWWLKAEDPFQCLAACISLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAA 683
Query: 703 LGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDR 762
LGRDKLGA AVNLV G++PADVY+ IA+RVL+IM++DAE+DPET QVDR
Sbjct: 684 LGRDKLGADAVNLVTGEKPADVYAEIAARVLKIMQQDAEEDPETFRNATYAKLMLDQVDR 743
Query: 763 KLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEA 822
KLVKQTVMTSVYGVTY GARDQIK+RLKER A DDS F A+CYAAK TL ALEEMFEA
Sbjct: 744 KLVKQTVMTSVYGVTYSGARDQIKKRLKERGAFGDDSLTFHAACYAAKITLKALEEMFEA 803
Query: 823 ARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKV 882
AR+I +W +CAK+IA+ N+ V WTTP+GLP VQPYR GR ++KT+LQVL+L RETDKV
Sbjct: 804 ARAIKTWFGECAKIIAAENKAVCWTTPLGLPVVQPYRLPGRHLVKTTLQVLTLSRETDKV 863
Query: 883 LVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREK 942
+RQ TAF PNF+HSLDGSHMMMTAVAC AGL FAGVHDS+WTHACDV+ MN ILREK
Sbjct: 864 QTRRQMTAFAPNFIHSLDGSHMMMTAVACNSAGLSFAGVHDSFWTHACDVEIMNTILREK 923
Query: 943 FVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
FVELYE PILENLLESFQKSFP L+FPPLPERGDFDLR VL S YFFN
Sbjct: 924 FVELYEKPILENLLESFQKSFPDLSFPPLPERGDFDLRNVLESPYFFN 971
>K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1015
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/859 (68%), Positives = 684/859 (79%), Gaps = 20/859 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK+ETE WEEAAKEY+ELL D+CE KL PNLPYMKSLFLGWFEPL+ AIV EQE+
Sbjct: 175 LRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKEQEM 234
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCARVIHAALQIGEAIE 251
+ + + PYF LPADKMAVI MHKLMGLLMT H +G ARV+ AA IG+AIE
Sbjct: 235 YGEGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQAACGIGDAIE 294
Query: 252 NEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXX 311
NE RI E + + K S+
Sbjct: 295 NEVRIHKFL---------------EKTKKKKGDRSKKNKASESVADIKEEQKLRKKVI-- 337
Query: 312 SSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPD 371
L+K+QK+ V G++KG DD KPWG + KVG R+++LL++TAYIQ P QL + PD
Sbjct: 338 -DLMKKQKLVAVRGLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPD 396
Query: 372 IRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRY 431
IRPAF H+F+T S K +RYGI++CDPL+ KGLE++AKNMVIPY+PMLVPP NW+ Y
Sbjct: 397 IRPAFVHSFRTVAKVSAKASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGY 456
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQ 491
DKG +LFLPSYVMRTHGA+QQ EAVKRAP QLEP+FEALD+LG+TKWR+N+++L V+ +
Sbjct: 457 DKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDR 516
Query: 492 IWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLA 551
IW SGGR+ADLVDRDDV I+KWK + K++ KEN ER+SQRC+IELKLA
Sbjct: 517 IWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLA 576
Query: 552 VARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 611
VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFAEGR LGKSGL+WLKI
Sbjct: 577 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKI 636
Query: 612 HLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLS 671
HLANLYAGGVDKL +E R+ FTENH +D+FDSAD+PL+GRRWWL+AEDPLQCLA CI L+
Sbjct: 637 HLANLYAGGVDKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLT 696
Query: 672 EALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASR 731
EALRS +PET ISH+PVH DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA+R
Sbjct: 697 EALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 756
Query: 732 VLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 791
V IM++DA+KDP QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKE
Sbjct: 757 VSNIMQRDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE 816
Query: 792 RCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIG 851
R AI DD+ELF ASCYAAK TLTALEEMF+ AR IM+WL DCAKVIAS N+PVRWTTP+G
Sbjct: 817 RNAISDDTELFGASCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLG 876
Query: 852 LPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVAC 911
LP VQPYR++G+ IIKTSLQ+L+L+RETDKV+V RQ TAFPPNFVHSLDGSHMMMTAVAC
Sbjct: 877 LPVVQPYRKLGKHIIKTSLQMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVAC 936
Query: 912 KKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPL 971
KK GL+FAGVHDSYWTHACDVD+MNRILREKFVELYE P+LENLLESFQ SFP L+FP L
Sbjct: 937 KKEGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSL 996
Query: 972 PERGDFDLREVLNSQYFFN 990
PERGDFDLREVL S YFFN
Sbjct: 997 PERGDFDLREVLESPYFFN 1015
>M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra023533 PE=3 SV=1
Length = 975
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/1016 (60%), Positives = 736/1016 (72%), Gaps = 67/1016 (6%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRF-SQHSNFLEKILQPRNQSTCPVSGSA-QVGVFTSI 58
MW ++AK R+ RF S+ FL +P V GS+ + +F SI
Sbjct: 1 MWRNIAKHAITRS--------QARFGSKGRGFLAFSHEP------IVKGSSFRFPLFGSI 46
Query: 59 -----NELGRSNFSLFEYPFGLNSSLK-----LARGYASVAEAIVSSSDTEEDCSGGANE 108
+ELG SN GL+++ LARGY SVAE VSS+D EED S A+E
Sbjct: 47 PDPKCHELGFSN----RVGSGLSNNGSCLNGFLARGYTSVAEE-VSSTDVEEDPSL-ADE 100
Query: 109 VKQMVKKEVKGKPLLDRKA--------------KYKDTMLRKRQVKMETEAWEEAAKEYQ 154
V++++K+ K K D ++ KY++ L +RQVK+ETE WE AA EY+
Sbjct: 101 VEELLKEMKKEKKREDHRSWRMRNQESVGMGRSKYRN--LWRRQVKIETEEWERAANEYR 158
Query: 155 ELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADK 214
ELL D+CEQKL PNLPY+KSLFLGWFEPL+ I EQE+ + K +A Y + LPAD
Sbjct: 159 ELLADMCEQKLAPNLPYVKSLFLGWFEPLRDVISKEQELFRLGKSKAVYAHYIDQLPADM 218
Query: 215 MAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXX 274
+AVITMHKLMG LMT + GC +V+ AA +G+AIE E RI
Sbjct: 219 VAVITMHKLMGHLMTGGDN-GCVKVVQAACSVGDAIEQEIRICTFLDKTRKK-------- 269
Query: 275 EEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWK 334
EE D E +ENG + LIK+QK+ V I++ D K
Sbjct: 270 EEDDNE-ESGEVENGN---------PMREQDKLRKKVNDLIKKQKLSAVRKILQSHDYTK 319
Query: 335 PWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY 394
PW +ARAKVG +++LL+ TAYIQSP +Q PD+RPAFKHTFKT S K R+Y
Sbjct: 320 PWSADARAKVGSHLIELLVRTAYIQSPTNQQDNDLPDVRPAFKHTFKTVAQGSMKSGRKY 379
Query: 395 GIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCE 454
G+IECDPLV KGLEK+ + V+PY+PMLVPP NW+ YDKGAYLFL SY+M+THGAKQQ E
Sbjct: 380 GVIECDPLVRKGLEKTGRYAVMPYMPMLVPPLNWSGYDKGAYLFLASYIMKTHGAKQQRE 439
Query: 455 AVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXX 514
A+K AP QL+P+FEALD+LG+T+WR+N+R+L V+ +IW+SGG ADLVDR DV
Sbjct: 440 AIKSAPKGQLKPVFEALDTLGSTRWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPLPEKP 499
Query: 515 XXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRA 574
++KWK ++K+ KEN+ERHS RC+IELKL+VARKMK+E+GFYYPHNVDFRGRA
Sbjct: 500 DTEDESILKKWKWEMKSAKKENSERHSLRCDIELKLSVARKMKDEEGFYYPHNVDFRGRA 559
Query: 575 YPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTE 634
YPM P+LNHLGSDLCRG+LEFAEGRPLG GLRWLKIHLANLYAGGVDKL YE R+AFTE
Sbjct: 560 YPMPPHLNHLGSDLCRGVLEFAEGRPLGSPGLRWLKIHLANLYAGGVDKLSYEGRLAFTE 619
Query: 635 NHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSC 694
+HLDD+FDSADRPLEG RWWL+AEDP QCLA CINL+EALRSP+PET +SH+P+H DGSC
Sbjct: 620 SHLDDIFDSADRPLEGNRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQDGSC 679
Query: 695 NGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXX 754
NGLQHYAALGRD +GA AVNLV G++PADVYS IA+RVL+IMR+DA+KDPE
Sbjct: 680 NGLQHYAALGRDTIGAEAVNLVAGEKPADVYSEIATRVLDIMRRDADKDPEIYPDALRAR 739
Query: 755 XXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLT 814
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER A DD E+F A+CYAAK TL
Sbjct: 740 KLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSAFSDDKEIFGAACYAAKVTLA 799
Query: 815 ALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLS 874
A++EMFEAAR+IM W +CAK+IAS NE VRWTTP+GLP VQPY Q+G ++KTSLQ LS
Sbjct: 800 AMDEMFEAARAIMHWFGECAKIIASENETVRWTTPLGLPVVQPYLQMGTKLVKTSLQTLS 859
Query: 875 LRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDE 934
L+RETDKV+V+RQ TAFPPNF+HSLDGSHMMMTAVACK+ G+ FAGVHDS+WTHACDVD+
Sbjct: 860 LQRETDKVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRVGVCFAGVHDSFWTHACDVDK 919
Query: 935 MNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+N+ILREKFVELY PILENLLESF+KSFP L FPPLPERGD DL+ VL S YFFN
Sbjct: 920 LNKILREKFVELYSQPILENLLESFEKSFPHLEFPPLPERGDLDLKVVLESTYFFN 975
>B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_746127 PE=3 SV=1
Length = 847
Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/864 (66%), Positives = 681/864 (78%), Gaps = 20/864 (2%)
Query: 127 AKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSA 186
KYK LR+RQVK+E EAWE+AAKEY+ELL+D+CE KL PNLPYMK LFLGWFEPL+ A
Sbjct: 4 GKYK--ALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFEPLRDA 61
Query: 187 IVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQI 246
I EQE ++ + ++PYF+ LPAD M+VITMHKL ++M GCARV+ AA I
Sbjct: 62 IAKEQESIRRGKTRPDYSPYFDLLPADMMSVITMHKLTAMVMIGGEH-GCARVVAAACMI 120
Query: 247 GEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXX 306
G+AIE E RI +GE E KL
Sbjct: 121 GDAIEQEIRIHNFLEKTRKKKENADNSKNSVEGESPAVMNEEEKLR-------------- 166
Query: 307 XXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
+ LIK+QK+ V I+KG DD K W +A+AKVG R+++LL++TAYIQ P QL
Sbjct: 167 --KKVTDLIKKQKLPAVRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLA 224
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPN 426
SPPD+RPAF HTF+T +++K R+YG+I+CD LV KGLE++ +++VIPY+PMLVPP
Sbjct: 225 DSPPDLRPAFVHTFRTVSYENKKTSRKYGVIQCDSLVLKGLEQTDRHIVIPYMPMLVPPL 284
Query: 427 NWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLL 486
W YDKGA+LFLPSYVMR HGAKQQ EAVKR P QL+ +FEALD+LGNTKWR+N+R+L
Sbjct: 285 RWRGYDKGAHLFLPSYVMRIHGAKQQREAVKRTPKKQLQLVFEALDTLGNTKWRVNKRVL 344
Query: 487 DVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEI 546
V+ +IW +GGRLADLVDR DV ++KWK +VK++ KEN ERHS+RC+
Sbjct: 345 SVVDRIWNNGGRLADLVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDT 404
Query: 547 ELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 606
ELK+AVARKMK E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL
Sbjct: 405 ELKIAVARKMKNEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 464
Query: 607 RWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAA 666
RWLKIHLANL+A GVDKL +E R+AFTENHLDD+FDSAD+PLEG+RWWL AEDP QCLA
Sbjct: 465 RWLKIHLANLFACGVDKLSHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAEDPFQCLAV 524
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
CINL+EALRS +PET +SH+P+H DGSCNGLQHYAALGRDKLGAAAVNLV G++P DVYS
Sbjct: 525 CINLTEALRSSSPETCLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYS 584
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
GIA+RVL+IMR DA++DPE QVDRKLVKQTVMTSVYGVTY+GARDQI+
Sbjct: 585 GIAARVLDIMRSDAQEDPEVFPDALRARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIE 644
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRW 846
RRLKER + D+SE+F SCYAAK TLTAL EMFEAARSIM+WL +CAK+IAS NEPVRW
Sbjct: 645 RRLKER-GLTDNSEIFGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKIIASENEPVRW 703
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMM 906
TTP+GLP VQPYR++G+ +IKTSLQ L+L++ETDKV+VKRQ TAFPPNFVHSLDGSHMMM
Sbjct: 704 TTPLGLPVVQPYRKLGKHVIKTSLQFLTLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMM 763
Query: 907 TAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKL 966
TAVACK+AGL FAGVHDSYWTHACDVDEMNRILREKFVELYE PIL+NLLESFQKSFP L
Sbjct: 764 TAVACKRAGLKFAGVHDSYWTHACDVDEMNRILREKFVELYETPILKNLLESFQKSFPTL 823
Query: 967 NFPPLPERGDFDLREVLNSQYFFN 990
+FPPLPE GDF+LR+VL S YFFN
Sbjct: 824 SFPPLPEWGDFELRQVLESPYFFN 847
>Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia oleracea GN=rpoT2
PE=2 SV=1
Length = 1036
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1023 (57%), Positives = 731/1023 (71%), Gaps = 60/1023 (5%)
Query: 1 MWAHLAKRTFQR--NFKLPSYSPSTRFS-----QHSNFLEKI-LQPRNQSTCPVSGSAQV 52
MW + AK+ R N L +S S +S F +++ +P C ++V
Sbjct: 41 MWRNFAKQAISRTPNLCLRKFSISRSYSFLGGTHDCGFSDRLKFRPFELGFCKNRSFSEV 100
Query: 53 GVFTSINELGRSNFSLFEYPFG------LNSSLKLARGYASVAEAIVSSSDTEEDCSGGA 106
G L + E P LN ++ +GYASV EA V SS ED
Sbjct: 101 GFCREGGSLVKEGIG--ERPVSGCLGNRLNFNVVCPKGYASVVEAEVDSSTDLEDDVSVF 158
Query: 107 NEVKQMV-------------------KKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWE 147
+E++++V +K V G PL YK LR RQ+K+ETE+W+
Sbjct: 159 DEIQELVEEMRKEEKRAKWRESHQRQQKMVAGMPL------YKYQKLRNRQIKLETESWQ 212
Query: 148 EAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYF 207
+AA EY+ELL D+C+ KL PNLPY+KSLFLGWFEP + +I+ +QE+ ++ + + YF
Sbjct: 213 QAANEYKELLADMCKLKLAPNLPYVKSLFLGWFEPFRDSIIEDQELIRQGKCRGAYGTYF 272
Query: 208 NDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXX 267
+ LPAD MA+ITMHKLMG+LMT +G G +V+ AA +GEAIE E RI
Sbjct: 273 DQLPADMMAIITMHKLMGMLMTG-SGHGSVKVVQAACALGEAIEQEVRIHTFLEKAKKKK 331
Query: 268 XXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGII 327
++PD A I+ + ++LIK+QK +Q + I+
Sbjct: 332 GDRS---KKPDDAASDAEIQEQQ---------------HLRKNVNNLIKKQKRRQALKIV 373
Query: 328 KGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADS 387
D KPWG E RAKVG R+++LLI+TAYIQ P SQ PPD+RPAF H+ K+ ++
Sbjct: 374 DSQGDLKPWGSETRAKVGSRLIELLIQTAYIQPPASQSACDPPDLRPAFVHSLKSVGPEN 433
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTH 447
+K RR+G+IECDPL+ KGLEK+ +++VIPY+PMLVPP WT YDKGAYL L S+VMRTH
Sbjct: 434 KKTGRRFGMIECDPLIIKGLEKTPRHIVIPYMPMLVPPEKWTGYDKGAYLVLRSFVMRTH 493
Query: 448 GAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD 507
G+K Q AV+RA QL+ +FEALD+LGNTKWR+N+++L ++ ++W +GGRLADLVDRDD
Sbjct: 494 GSKHQRVAVRRASEEQLKSVFEALDTLGNTKWRVNKKVLSIVDRVWANGGRLADLVDRDD 553
Query: 508 VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
V +++WK +V+++ KEN ERHSQRC++ELKLAVARKMK+E+GF+YPHN
Sbjct: 554 VPLPEKPDTEDESELKRWKWKVRSLKKENRERHSQRCDVELKLAVARKMKDEEGFFYPHN 613
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
VDFRGRAYPMHPYLNHLGSD+CRGILEFAEGR +GKSGLRWLKIH+ANLYAGG+DKL E
Sbjct: 614 VDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRAVGKSGLRWLKIHVANLYAGGIDKLSLE 673
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
R+AFTENHLDD+FDS D+PLEGR WWL+AEDP QCLA CI L+EALRS PE SH+P
Sbjct: 674 GRIAFTENHLDDIFDSVDKPLEGRCWWLKAEDPFQCLAVCIELAEALRSTRPEAFKSHIP 733
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETN 747
VH DGSCNGLQHYAALGRD+LGA AVNLV G++PADVYSGIASRVL IM DA+KDP
Sbjct: 734 VHQDGSCNGLQHYAALGRDELGATAVNLVAGEKPADVYSGIASRVLSIMEADAKKDPTDF 793
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCY 807
QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER A DD+E++ A+CY
Sbjct: 794 PDTVLARKLINQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAAFSDDTEIYGAACY 853
Query: 808 AAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIK 867
A+ TLTAL EMF+AARSIMSWL DCAK+IAS N+PVRW TP+GLP VQPY + GR +IK
Sbjct: 854 VARITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYCKKGRHLIK 913
Query: 868 TSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWT 927
TSLQ+L+L +ET+K++V+RQ +AFPPNFVHSLDGSHMMMTAVACK AGL+FAGVHDSYWT
Sbjct: 914 TSLQMLTLEKETEKIMVRRQKSAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWT 973
Query: 928 HACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQY 987
HACDVD+M+ ILREKFVELY+ PILENLLE+FQ+S+P L+FPPLP+RGDF+LR+VL+S Y
Sbjct: 974 HACDVDQMSSILREKFVELYDQPILENLLETFQQSYPTLSFPPLPDRGDFELRDVLDSPY 1033
Query: 988 FFN 990
FFN
Sbjct: 1034 FFN 1036
>R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10003497mg PE=4 SV=1
Length = 1014
Score = 1181 bits (3054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/999 (59%), Positives = 719/999 (71%), Gaps = 33/999 (3%)
Query: 1 MWAHLAKRTFQRNF-KLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSA--QVGVFTS 57
MW ++AK+ R+ +L S + SQ S F K L R +SGS ++GV
Sbjct: 40 MWRNIAKQAILRSAARLNVGSHTLGISQESVF-SKNLSFRCSVLGSISGSPCHEMGVRHL 98
Query: 58 INELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEV 117
R F F GLN +L ARG+ SVAE ++S+ EE + + KK
Sbjct: 99 SGITRREEF--FNNERGLNGTL--ARGFTSVAEEVLSTDVEEEPEVDELLKEMKKEKKRE 154
Query: 118 KGKPLLDRKAKY------KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPY 171
+ +K ++ K L +RQVK+ETE WE AA EY+ELL D+CE+KL PNLPY
Sbjct: 155 SHRSWRMKKQEHLGMGRTKFQNLWRRQVKIETEEWERAAAEYRELLTDMCERKLAPNLPY 214
Query: 172 MKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNH 231
+KSLFLGWFEPL+ AI EQE+ K T+A Y + LPAD +AVITMHKLMG LMT
Sbjct: 215 VKSLFLGWFEPLRDAIAKEQEMYSLGKSKATYAHYLDQLPADMIAVITMHKLMGHLMTGG 274
Query: 232 NGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKL 291
GC +V+ AA +G+AIE E RI E GE +ENG
Sbjct: 275 EN-GCIKVVQAACTVGDAIEQEIRICTFLDKTRKKKGDD----NEESGE-----VENG-- 322
Query: 292 SDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQL 351
+ LIK+QK+ V I++ D KPW + RAKVG R+++L
Sbjct: 323 -------TAMKEQDKLRKMVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIEL 375
Query: 352 LIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSA 411
L+ TAYIQSP +Q PD+RPAF HTFKT S K R+YG+IECDPLV KGLEKS
Sbjct: 376 LVRTAYIQSPANQQDNDMPDVRPAFVHTFKTVAKGSMKSGRKYGVIECDPLVRKGLEKSG 435
Query: 412 KNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEAL 471
+ V+PY+PMLVPP W+ YDKGAYLFL SY+M+THGAKQQ EAVK AP QL+P+FEAL
Sbjct: 436 RYAVMPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGAKQQREAVKSAPKGQLQPVFEAL 495
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKT 531
D+LG+TKWR+N+R+L V+ +IW+SGG +ADLVDR DV ++KW+ + K+
Sbjct: 496 DTLGSTKWRVNKRVLTVVDRIWSSGGCVADLVDRSDVPLPEKPDTEDENILKKWRWEAKS 555
Query: 532 IMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRG 591
K N+ERHSQRC+ ELKL+VARKMK+E+GFYYPHN+DFRGRAYPM P+LNHLGSDLCRG
Sbjct: 556 AKKVNSERHSQRCDTELKLSVARKMKDEEGFYYPHNIDFRGRAYPMPPHLNHLGSDLCRG 615
Query: 592 ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGR 651
+LEFAEGRPLG GLRWLKIHLANLYAGGVDKL E R+AFTENHL+D+FDSADRPLEG
Sbjct: 616 VLEFAEGRPLGIPGLRWLKIHLANLYAGGVDKLSLEGRLAFTENHLEDIFDSADRPLEGS 675
Query: 652 RWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAA 711
RWWL+AEDP QCLA CINL+EALRSP+PET +SH+P+H DGSCNGLQHYAALGRD LGA
Sbjct: 676 RWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAE 735
Query: 712 AVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMT 771
AVNLV G++PADVYSGIA+RVL+IMR+DA++ PE QVDRKLVKQTVMT
Sbjct: 736 AVNLVAGEKPADVYSGIATRVLDIMRRDADRGPEAFPDALRARKLLNQVDRKLVKQTVMT 795
Query: 772 SVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLA 831
SVYGVTY+GARDQIKRRLKER D+ E+F A+CYAAK TL A++EMF+AAR+IM W
Sbjct: 796 SVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAKVTLAAIDEMFQAARAIMRWFG 855
Query: 832 DCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAF 891
+CAK+IAS NE VRWTTP+GLP VQPY Q+G ++KTSLQ LSL+RETDKV+V+RQ TAF
Sbjct: 856 ECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQRETDKVIVRRQRTAF 915
Query: 892 PPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 951
PPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++NRILREKFVELY PI
Sbjct: 916 PPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNRILREKFVELYSQPI 975
Query: 952 LENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LENLLESF++SFP L FPPLPERGD DLR VL+S YFFN
Sbjct: 976 LENLLESFEQSFPHLEFPPLPERGDLDLRVVLDSPYFFN 1014
>D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidopsis lyrata subsp.
lyrata GN=ARALYDRAFT_909544 PE=3 SV=1
Length = 1009
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1006 (59%), Positives = 727/1006 (72%), Gaps = 52/1006 (5%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSA--QVGVFTSI 58
MW ++AK+ R+ + TR S+ K L R +SGS ++G F S+
Sbjct: 40 MWRNIAKQAILRSATRSNVGSKTRGFLGSSPESKNLSFRFPVFGSISGSPCYEMG-FRSL 98
Query: 59 NELGRSN-FSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEED-------------CSG 104
+ + R + FS E LN +L ARGYASVAE ++S+ D EE+
Sbjct: 99 SGITRRDEFSKSER--CLNGTL--ARGYASVAEEVLST-DVEEEPEVHELLKEMKKEKKR 153
Query: 105 GANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQK 164
++ +M K+E G + K+++ L +RQVK+ETE WE AA EY ELL D+CEQK
Sbjct: 154 ESHRSWRMKKQEQFGMG----RTKFQN--LWRRQVKIETEEWERAAAEYMELLTDMCEQK 207
Query: 165 LVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLM 224
L PNLPY+KSLFLGWFEPL+ AI +QE+ + K T+A Y + LPADK++VITMHKLM
Sbjct: 208 LAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLM 267
Query: 225 GLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHA 284
G LMT + GC +V+HAA +G+AIE E RI E GE
Sbjct: 268 GHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKTRKKKGDE----NEESGE---- 318
Query: 285 AIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKV 344
+ENG + LIK+QK+ V I++ D KPW + RAKV
Sbjct: 319 -VENG---------TSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKV 368
Query: 345 GCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVT 404
G R+++LL+ TAYIQSP Q PD+RPAF HTF+ A + R+YG+IECDPLV
Sbjct: 369 GSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFRIANSG-----RKYGVIECDPLVR 423
Query: 405 KGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQL 464
KGLEKS + VIPY+PMLVPP W+ YDKGAYLFL SY+M+THG+KQQ EA+K AP QL
Sbjct: 424 KGLEKSGRYAVIPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGSKQQREALKSAPKGQL 483
Query: 465 EPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK 524
P+FEALD+LG+TKWR+N+R+L V+ +IW+SGG ADLVDR DV ++K
Sbjct: 484 LPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPLPEKPDTEDEGILKK 543
Query: 525 WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHL 584
WK +VK+ K N+ERHSQRC+ ELKL+VARKMK+E+ FYYPHN+DFRGRAYPM P+LNHL
Sbjct: 544 WKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHL 603
Query: 585 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSA 644
GSDLCRG+LEFAEGRPLG SGLRWLKIHLANLYAGGVDKL + R+AFTENHL+D+FDSA
Sbjct: 604 GSDLCRGVLEFAEGRPLGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLEDIFDSA 663
Query: 645 DRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALG 704
DRPLEG RWWL+AEDP QCLA CINL+EALRSP+PET +SH+P+H DGSCNGLQHYAALG
Sbjct: 664 DRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALG 723
Query: 705 RDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKL 764
RD LGA AVNLV G++PADVYSGIA+RVL+IMR+DA++DPE QVDRKL
Sbjct: 724 RDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEAYPDALRARKLLNQVDRKL 783
Query: 765 VKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAAR 824
VKQTVMTSVYGVTY+GARDQIKRRLKER D+ E+F A+CYAAK TL A++EMF+AAR
Sbjct: 784 VKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAKVTLAAIDEMFQAAR 843
Query: 825 SIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV 884
+IM W DCAK+IAS NE VRWTTP+GLP VQPY Q+G ++KTSLQ LSL+ ETD+V+V
Sbjct: 844 AIMRWFGDCAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIV 903
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
+RQ TAFPPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++NRILREKFV
Sbjct: 904 RRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNRILREKFV 963
Query: 945 ELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
ELY PILENLLESF++SFP L FPPLPERGD DL+ VL+S YFFN
Sbjct: 964 ELYSQPILENLLESFEQSFPHLEFPPLPERGDLDLKVVLDSPYFFN 1009
>B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica oleracea var.
alboglabra GN=BoB028L01.020 PE=3 SV=1
Length = 951
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/1003 (57%), Positives = 708/1003 (70%), Gaps = 65/1003 (6%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS-IN 59
MW ++ R R K+ +S ST + F+ S+ +SG + + T+ +N
Sbjct: 1 MWRNIFGRATLR--KIKPFSDSTSATHFRGFI---------SSINLSGGVRNQLATNPVN 49
Query: 60 ELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKE--- 116
ELGR L +PF RG A+ A+ I S + NE+ ++KE
Sbjct: 50 ELGRLTSVLHNHPFAF-------RGLATAAQTIDSDDSSSGSDE--VNELMSAMEKETER 100
Query: 117 VKGKPLLDRKAKYKDTM---------LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVP 167
V+ K L K K L++RQVK+ETE WE+AAKE QE++ED+CEQKL P
Sbjct: 101 VRKKARLAAKQPMKVVAGMGAQKYYSLKQRQVKLETEEWEKAAKECQEIIEDMCEQKLAP 160
Query: 168 NLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLL 227
NLPY+KSLFLGWFEPL+ AI A+ + K K+ +A Y LPAD MAVITMHK+MGLL
Sbjct: 161 NLPYVKSLFLGWFEPLRDAIQADLDGFKVKKGKIPYASYMEQLPADMMAVITMHKMMGLL 220
Query: 228 MTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIE 287
MTN G+G +V++AA QIGEAIE EARI E + E
Sbjct: 221 MTNAEGVGVVKVVNAATQIGEAIEQEARITSFMKKAKKKKNVVDDESEAVNASGEVETKE 280
Query: 288 NGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCR 347
KL ++L+K+ K++QV I+K D +K WGQEA+ KVG R
Sbjct: 281 TLKLK----------------KQINTLLKKHKVRQVREIVKAHDSFKSWGQEAQVKVGAR 324
Query: 348 VMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL 407
++QLL+ETAYIQ P Q PP+IRPAFK + + +++K R+YG IECDPL+ KGL
Sbjct: 325 LIQLLMETAYIQPPAEQFDDGPPEIRPAFKQSSRIVTIENKKLSRKYGCIECDPLIRKGL 384
Query: 408 EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPI 467
+KSA++MVIPYLPML+PP NWT YD+GA+ FLPSY+MRTHGAKQQ A+KR P QLEP+
Sbjct: 385 DKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYIMRTHGAKQQRIAIKRTPKAQLEPV 444
Query: 468 FEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKR 527
F+ L++LGNTKWRIN+++L ++ +IW +GGR+ LVDRDDV I++WK
Sbjct: 445 FQGLNTLGNTKWRINKKVLSLVDRIWANGGRVGGLVDRDDVPIPEEPDSEDQEEIKQWKW 504
Query: 528 QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
++K KEN+ERHSQRC++ELKL VARKMK+E+GFY+PHNVDFRGRAYPMHPYLNHLGSD
Sbjct: 505 KMKEANKENSERHSQRCDVELKLEVARKMKDEEGFYFPHNVDFRGRAYPMHPYLNHLGSD 564
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
LCRGILEF EG+PLG+SGLRWLKIH+ANLY GGVDK Y+ RVAF E+HL+D+FDS+DRP
Sbjct: 565 LCRGILEFCEGKPLGESGLRWLKIHIANLYGGGVDKFAYKDRVAFAESHLEDIFDSSDRP 624
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
LEG+RWWL AEDP QCLAAC+NLSEALRSP PE +SH+P+H DGSCNGLQHYAALGRD+
Sbjct: 625 LEGKRWWLNAEDPFQCLAACMNLSEALRSPFPEAAVSHIPIHQDGSCNGLQHYAALGRDQ 684
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQ 767
+GAAAVNL G++PADVY+ IA+RVL IMR+DAE+DPET QVDRKLVKQ
Sbjct: 685 IGAAAVNLFTGEKPADVYADIAARVLNIMRQDAEEDPETFPNATYAKLMLDQVDRKLVKQ 744
Query: 768 TVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIM 827
TVMTSVYGVTY GARDQIK+RLKER A DDS+ F ASCYAA+ TL ALEEMFEAAR+IM
Sbjct: 745 TVMTSVYGVTYSGARDQIKKRLKERGAFADDSQNFHASCYAARVTLKALEEMFEAARAIM 804
Query: 828 SWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQ 887
SW +CAK+IAS N+ V WTTP+GLP VQPYR+ R + V+ ++Q
Sbjct: 805 SWFGECAKIIASQNKAVCWTTPLGLPVVQPYRKNERHL----------------VMARKQ 848
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
TAF PNFVHSLDGSHMMMTAVAC KAGL FAGVHDS+WTHACDV+ MN ILREKFVELY
Sbjct: 849 MTAFAPNFVHSLDGSHMMMTAVACNKAGLSFAGVHDSFWTHACDVELMNNILREKFVELY 908
Query: 948 EAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+ PILENLLESFQKSFP L FPPLPERGDFDLREV+ S YFFN
Sbjct: 909 DKPILENLLESFQKSFPGLTFPPLPERGDFDLREVIRSPYFFN 951
>E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTp
PE=3 SV=1
Length = 985
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/876 (62%), Positives = 679/876 (77%), Gaps = 25/876 (2%)
Query: 118 KGKPLLDR-KAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLF 176
+G+P +R + K +LR+RQVKMETEAWE+AA+EY+EL++++CE+KL P+LPY+KSLF
Sbjct: 132 RGRPARERERESSKYNLLRRRQVKMETEAWEDAAREYRELIKEMCEKKLAPHLPYVKSLF 191
Query: 177 LGWFEPLKSAIVAEQEVCKKSHRKMT--HAPYFNDLPADKMAVITMHKLMGLLMTNHNGI 234
LGWFEP + AI +QE+ ++ + + +AP+ LPAD MAVI MHK+M LLM +
Sbjct: 192 LGWFEPFRDAIKEDQELQRRRKKNLAAAYAPFIGHLPADMMAVIVMHKMMVLLMNGQDD- 250
Query: 235 GCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDX 294
GC R++HAA IGEAIE E RI E + E + ++++
Sbjct: 251 GCVRLVHAACHIGEAIEQEVRIYNFFQKIKKSTRENQILSENHENESKNQEALRKRVTN- 309
Query: 295 XXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIE 354
L+K++K++ V +++ DD +PWG+++ AK+G R + LLI+
Sbjct: 310 -------------------LLKKKKIRDVQLLVEA-DDVEPWGRDSHAKLGSRXIDLLIQ 349
Query: 355 TAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNM 414
T Y+Q P++QL PP+IRPAF+HTFKT + ++RYGIIECDPLV KGL+ +A+++
Sbjct: 350 TXYVQPPLNQLAZGPPEIRPAFRHTFKTXKKEXDNSVKRYGIIECDPLVRKGLDATARHL 409
Query: 415 VIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSL 474
VIPY+PML+PP WT YDKG +LFLPSYVMRTHGAKQQ +A+K P QL+ +FEALD+L
Sbjct: 410 VIPYMPMLIPPKKWTGYDKGGHLFLPSYVMRTHGAKQQRDALKSVPKXQLKEVFEALDTL 469
Query: 475 GNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMK 534
G+TKWR+N+R+LDVI +W SG +A LVD D+ +R+W+ VK + K
Sbjct: 470 GSTKWRVNKRVLDVIDSLWASGRPIAGLVDHSDIALPEKPCTEDEAQMRRWRWSVKKVKK 529
Query: 535 ENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILE 594
EN ERH+QRC+IELKL+VARKM++E GFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 530 ENCERHAQRCDIELKLSVARKMRKEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 589
Query: 595 FAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWW 654
FAEG+PLGK+GLRWLKIHLANLY GGVDKL ++ R+ F ENHL D+FDSA+RP+EGR+WW
Sbjct: 590 FAEGKPLGKTGLRWLKIHLANLYGGGVDKLSFDGRLTFVENHLADIFDSAERPIEGRQWW 649
Query: 655 LEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVN 714
L AEDP QCLAACI+LS AL+S +PE ISH+PVH+DGSCNGLQHYAALGRD+LGAA+VN
Sbjct: 650 LNAEDPFQCLAACIDLSXALKSSSPEDAISHIPVHLDGSCNGLQHYAALGRDRLGAASVN 709
Query: 715 LVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVY 774
LV G++P DVYSGIA+RV+EI+ +D++KDP + QVDRKLVKQTVMTSVY
Sbjct: 710 LVSGEKPXDVYSGIAARVMEIVVRDSKKDPAVHPTSLLARILIDQVDRKLVKQTVMTSVY 769
Query: 775 GVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCA 834
GVTY+GARDQIKRRLKER I DD LFSA+CYAAK TL+ALEEMF+AARSIMSWL DCA
Sbjct: 770 GVTYIGARDQIKRRLKERDFITDDKLLFSAACYAAKVTLSALEEMFQAARSIMSWLGDCA 829
Query: 835 KVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPN 894
KVIAS NEPVRWTTP+GLP VQPY + R +++TSLQVL+L+RE++KVLVKRQ TAFPPN
Sbjct: 830 KVIASENEPVRWTTPLGLPVVQPYWKQSRHLVRTSLQVLALQRESNKVLVKRQKTAFPPN 889
Query: 895 FVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 954
FVHSLDGSHMMMTAVACK AGL+FAGVHDSYWTHACDVD+M+RILR KFVELY PILEN
Sbjct: 890 FVHSLDGSHMMMTAVACKLAGLNFAGVHDSYWTHACDVDDMSRILRLKFVELYSMPILEN 949
Query: 955 LLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
LLESFQ SFP L FPPLP+RGDFDL+EVL S YFFN
Sbjct: 950 LLESFQTSFPTLVFPPLPDRGDFDLQEVLESPYFFN 985
>K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 998
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/859 (66%), Positives = 668/859 (77%), Gaps = 37/859 (4%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK+ETE WEEAAKEY+ELL D+CE KL PNLPYMKSLFLGWFEPL+ AIV EQE+
Sbjct: 175 LRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKEQEM 234
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCARVIHAALQIGEAIE 251
+ + + PYF LPADKMAVI MHKLMGLLMT H +G ARV+ AA IG+AIE
Sbjct: 235 YGEGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQAACGIGDAIE 294
Query: 252 NEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXX 311
NE RI E + + K S+
Sbjct: 295 NEVRIHKFL---------------EKTKKKKGDRSKKNKASESVADIKEEQKLRKKVI-- 337
Query: 312 SSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPD 371
L+K+QK+ V G++KG DD KPWG + KVG R+++LL++TAYIQ P QL + PD
Sbjct: 338 -DLMKKQKLVAVRGLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPD 396
Query: 372 IRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRY 431
IRPAF H+F+T S K +RYGI++CDPL+ KGLE++AKNMVIPY+PMLVPP NW+ Y
Sbjct: 397 IRPAFVHSFRTVAKVSAKASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGY 456
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQ 491
DKG +LFLPSYVMRTHGA+QQ EAVKRAP QLEP+FEALD+LG+TKWR+N+++L V+ +
Sbjct: 457 DKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDR 516
Query: 492 IWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLA 551
IW SGGR+ADLVDRDDV I+KWK + K++ KEN ER+SQRC+IELKLA
Sbjct: 517 IWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLA 576
Query: 552 VARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 611
VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFAEGR LGKSGL+WLKI
Sbjct: 577 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKI 636
Query: 612 HLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLS 671
HLANLYAGGVDKL +E R+ FTENH +D+FDSAD+PL+GRRWWL+AEDPLQCLA CI L+
Sbjct: 637 HLANLYAGGVDKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLT 696
Query: 672 EALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASR 731
EALRS +PET ISH+PVH +LGAAAVNLV G++PADVYSGIA+R
Sbjct: 697 EALRSSSPETFISHIPVH-----------------QLGAAAVNLVAGEKPADVYSGIAAR 739
Query: 732 VLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 791
V IM++DA+KDP QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKE
Sbjct: 740 VSNIMQRDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE 799
Query: 792 RCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIG 851
R AI DD+ELF ASCYAAK TLTALEEMF+ AR IM+WL DCAKVIAS N+PVRWTTP+G
Sbjct: 800 RNAISDDTELFGASCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLG 859
Query: 852 LPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVAC 911
LP VQPYR++G+ IIKTSLQ+L+L+RETDKV+V RQ TAFPPNFVHSLDGSHMMMTAVAC
Sbjct: 860 LPVVQPYRKLGKHIIKTSLQMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVAC 919
Query: 912 KKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPL 971
KK GL+FAGVHDSYWTHACDVD+MNRILREKFVELYE P+LENLLESFQ SFP L+FP L
Sbjct: 920 KKEGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSL 979
Query: 972 PERGDFDLREVLNSQYFFN 990
PERGDFDLREVL S YFFN
Sbjct: 980 PERGDFDLREVLESPYFFN 998
>F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=AT5G15700 PE=2 SV=1
Length = 1051
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/1003 (57%), Positives = 712/1003 (70%), Gaps = 64/1003 (6%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTR----------FSQHSNFLEKILQPRNQSTCPVSGSA 50
MW ++AK+ R+ + S TR FS++ +F +L S C G
Sbjct: 40 MWRNIAKQAISRSAARLNVSSQTRGLLVSSPESIFSKNLSFRFPVLG----SPCHGKGFR 95
Query: 51 QVGVFTSINELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGG----- 105
+ T E +S L S LARGY SVAE V S+D EE+
Sbjct: 96 CLSGITRREEFSKSERCL---------SGTLARGYTSVAEEEVLSTDVEEEPEVDELLKE 146
Query: 106 --------ANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELL 157
++ +M K++ G + K+++ L +RQVK+ETE WE AA EY ELL
Sbjct: 147 MKKEKKRESHRSWRMKKQDQFGMG----RTKFQN--LWRRQVKIETEEWERAAAEYMELL 200
Query: 158 EDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAV 217
D+CEQKL PNLPY+KSLFLGWFEPL+ AI +QE+ + K T+A Y + LPADK++V
Sbjct: 201 TDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISV 260
Query: 218 ITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEP 277
ITMHKLMG LMT + GC +V+HAA +G+AIE E RI ++
Sbjct: 261 ITMHKLMGHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKK-----------KKG 308
Query: 278 DGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWG 337
D +EN + LIK+QK+ V I++ D KPW
Sbjct: 309 DDNEESGGVEN---------ETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWI 359
Query: 338 QEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGII 397
+ RAKVG R+++LL+ TAYIQSP Q PD+RPAF HTFK A S R+YG+I
Sbjct: 360 ADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFKVAKG-SMNSGRKYGVI 418
Query: 398 ECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVK 457
ECDPLV KGLEKS + V+PY+PMLVPP W+ YDKGAYLFL SY+M+THGAKQQ EA+K
Sbjct: 419 ECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALK 478
Query: 458 RAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXX 517
AP QL+P+FEALD+LG+TKWR+N+R+L V+ +IW+SGG +AD+VDR DV
Sbjct: 479 SAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTE 538
Query: 518 XXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPM 577
++KWK +VK+ K N+ERHSQRC+ ELKL+VARKMK+E+ FYYPHN+DFRGRAYPM
Sbjct: 539 DEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPM 598
Query: 578 HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHL 637
P+LNHLGSDLCRG+LEFAEGRP+G SGLRWLKIHLANLYAGGVDKL + R+AFTENHL
Sbjct: 599 PPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHL 658
Query: 638 DDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGL 697
DD+FDSADRPLEG RWWL+AEDP QCLA CI+L+EALRSP+PET +SH+P+H DGSCNGL
Sbjct: 659 DDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGL 718
Query: 698 QHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXX 757
QHYAALGRD LGA AVNLV G++PADVYSGIA+RVL+IMR+DA++DPE
Sbjct: 719 QHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLL 778
Query: 758 XQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALE 817
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER D+ E+F A+CYAAK TL A++
Sbjct: 779 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAID 838
Query: 818 EMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR 877
EMF+AAR+IM W +CAK+IAS NE VRWTTP+GLP VQPY Q+G ++KTSLQ LSL+
Sbjct: 839 EMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQH 898
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
ETD+V+V+RQ TAFPPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++N
Sbjct: 899 ETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNI 958
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLR 980
ILREKFVELY PILENLLESF++SFP L+FPPLPERGD DL+
Sbjct: 959 ILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLK 1001
>Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cleome spinosa PE=4
SV=1
Length = 1021
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1007 (57%), Positives = 703/1007 (69%), Gaps = 86/1007 (8%)
Query: 1 MWAHLAKRTFQRNFKLPSYSPSTR----FSQHSNFLEK-ILQPRNQSTCPVSGSAQVGVF 55
MW ++AK+T R+ S +R FS S F E I +P SG +G +
Sbjct: 40 MWRNIAKQTISRSPVRLSVCRQSRGLLGFSSESIFPEIFIFRPSVIGPISSSGFHDMG-Y 98
Query: 56 TSINEL-------GRSNFSLF--EYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGA 106
+ E+ GR F E F S R Y + AEA VSS+D EED S
Sbjct: 99 SRTCEIPAPGDFSGRPGFGFLKDECCFHRFS----PRSYVNAAEA-VSSTDIEEDASV-V 152
Query: 107 NEVKQMVKKEVKGKPLLD---RKAKYKDTM---------LRKRQVKMETEAWEEAAKEYQ 154
+EV++++++ K + R+ K ++ + L++RQVK+ETEAWE+AA EY+
Sbjct: 153 DEVQELLREMKKEEKKEKVHLRRVKRQEDLGMLEKKYQSLKRRQVKIETEAWEKAANEYK 212
Query: 155 ELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADK 214
ELL D+CEQKL PNLPY+KSLFLGWFEPL+ AI +QE+ + + +A Y + LPAD
Sbjct: 213 ELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAIAKDQELYRLGKNRANYAYYIDQLPADM 272
Query: 215 MAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXX 274
+AVITMHKLMGLLMT + GC +VI AA +G+AIE E RI
Sbjct: 273 IAVITMHKLMGLLMTGGDN-GCVKVIMAACTVGDAIEQEIRICRFLEKTKKKKENISEGV 331
Query: 275 EEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWK 334
E + E S LIK+QK+ V I+ D K
Sbjct: 332 ENVEKE------------------TTVKEEDWLKRKVSELIKKQKLPAVRQILNSHDASK 373
Query: 335 PWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY 394
PW + RAKVG R+++L ++TAYIQ P +Q G PPDIRPAF HTFKT + +S+K RRY
Sbjct: 374 PWSTDVRAKVGSRLIELFMKTAYIQPPTNQRGDDPPDIRPAFVHTFKT-VKNSKKSGRRY 432
Query: 395 GIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCE 454
G+IECDPLV KGLEK+ +MV+PY+PMLVPP NW+ YD+GAY FLPSY+MR HGAKQQ E
Sbjct: 433 GVIECDPLVRKGLEKTGWHMVMPYMPMLVPPVNWSGYDRGAYFFLPSYLMRIHGAKQQRE 492
Query: 455 AVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXX 514
A+K P QL+ +FEALD+LGN KWR+N+R+L ++ +IW SGGRLADLVDR DV
Sbjct: 493 ALKSTPRKQLQLVFEALDTLGNAKWRVNKRVLSIVDRIWNSGGRLADLVDRSDVPLPEKP 552
Query: 515 XXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRA 574
++KWK +VK+ KEN ERHSQRC+IELKL VARKMK+E+GFYYPHN+DFRGRA
Sbjct: 553 DTEDENILKKWKWKVKSANKENRERHSQRCDIELKLNVARKMKDEEGFYYPHNIDFRGRA 612
Query: 575 YPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTE 634
YPMHP+LNHLGSDLCRG+LEFAEG+PLG SGLRWLKIHLANLYAGGVDKL +E R+AFTE
Sbjct: 613 YPMHPHLNHLGSDLCRGVLEFAEGKPLGSSGLRWLKIHLANLYAGGVDKLSFEGRLAFTE 672
Query: 635 NHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSC 694
NHLDD+F+SADRPLEGRRWWL+AEDP QCLA CIN++EALRSP PET +SH+P+H
Sbjct: 673 NHLDDIFNSADRPLEGRRWWLQAEDPFQCLAVCINITEALRSPCPETFVSHIPIH----- 727
Query: 695 NGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXX 754
+LGAAAVNLV G++PADVYSGIA+RVL+IMR+DAE+DPE
Sbjct: 728 ------------QLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEQDPEVFPDALRAR 775
Query: 755 XXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLT 814
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER DD+ELF A+CYAAK TLT
Sbjct: 776 NLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSIFTDDTELFGAACYAAKVTLT 835
Query: 815 ALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLS 874
AL EMF+AAR IMSWL +CAK+IAS N+PVRWTTP+GLP VQPYR++GR
Sbjct: 836 ALGEMFQAARDIMSWLGECAKIIASQNQPVRWTTPLGLPVVQPYRKMGRHT--------- 886
Query: 875 LRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDE 934
V+VKRQ TAFPPNFVHSLDGSHMMMTAVAC+KAG+ FAGVHDSYWTHACDVDE
Sbjct: 887 -------VMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGICFAGVHDSYWTHACDVDE 939
Query: 935 MNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLRE 981
+NR LREKFVELY+ PILE+LLESF+KSFP L+FPPLPERGDFDLRE
Sbjct: 940 LNRTLREKFVELYDKPILEDLLESFEKSFPHLSFPPLPERGDFDLRE 986
>Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0069P02.30-1 PE=2 SV=1
Length = 951
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/793 (67%), Positives = 634/793 (79%), Gaps = 19/793 (2%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K MLR+RQ+++ETEAWE+AA+EY+ELL D+C+QKL PNLPY+KSLFLGWFEPL+ I+
Sbjct: 175 HKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQII 234
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + + +HA YFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 235 AEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 293
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
AIE+E RI EE G A E +L
Sbjct: 294 AIEHEVRIHKFLEKTKKKSNKEMDNEEE--GGDSDIAKEQERLR---------------- 335
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
+ L+K+QK++QV I+K D+ KPWGQ+A AKVG R+++L+IETAYIQ P SQ
Sbjct: 336 KKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADG 395
Query: 369 PPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PPDIRPAF H +T + QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP +W
Sbjct: 396 PPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISW 455
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
T YDKGA+LFLPSYVMRTHGA+QQ +AV+RAP Q++ +FEAL++LG+TKWR+N+R+L +
Sbjct: 456 TGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSI 515
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +IW+SGGRLADLVDR DV ++KW+ ++ KEN+ERHSQRC++EL
Sbjct: 516 VDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVEL 575
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
KLAVARKMK+E GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRW
Sbjct: 576 KLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 635
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLANLYAGGVDKL Y+ R+AFTENHL+D+FDSADRPLEG+RWWL AEDP QCLA CI
Sbjct: 636 LKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCI 695
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
NL+EALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVY+GI
Sbjct: 696 NLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGI 755
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A+RV+EIM+ DA KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRR
Sbjct: 756 ATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 815
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
LKER I DDSELFSASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWTT
Sbjct: 816 LKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 875
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 876 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 935
Query: 909 VACKKAGLDFAGV 921
VACK+ GL+FA V
Sbjct: 936 VACKRQGLNFAVV 948
>G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_8g065900 PE=3 SV=1
Length = 727
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/680 (77%), Positives = 593/680 (87%), Gaps = 1/680 (0%)
Query: 312 SSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPD 371
+SLIK+QK QQ +GI+KG D KPWGQEA+ KVG R++QLLIETAY++ P ++ G PD
Sbjct: 48 ASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGSRLIQLLIETAYLEPPANKFGDGGPD 107
Query: 372 IRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRY 431
I PAFKHT KT DS RRYG+IECDP++ KGLEK+A+NMVIPY+PMLVPPNNW Y
Sbjct: 108 IFPAFKHTLKTISNDSNNGSRRYGVIECDPMIQKGLEKTARNMVIPYMPMLVPPNNWIGY 167
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQ 491
DKGAYLFLPSYVMR HGAKQQ +A+K AP NQL+ IFEAL++LGNTKWR+N+ +L VI Q
Sbjct: 168 DKGAYLFLPSYVMRIHGAKQQRDALKWAPKNQLDSIFEALNTLGNTKWRVNKSVLGVIDQ 227
Query: 492 IWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLA 551
IW +GGR+ADLVDRDD+ IRKWK +VK + KENNERHSQRC+IELKLA
Sbjct: 228 IWANGGRVADLVDRDDLPLPEELDTEDESEIRKWKWKVKNVKKENNERHSQRCDIELKLA 287
Query: 552 VARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 611
VARK+KEE GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK GL+WLKI
Sbjct: 288 VARKLKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKKGLQWLKI 347
Query: 612 HLANLYA-GGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
HLANLYA GGVDKL Y+ RVAFTE+HLDD+FDSADRPLEG+RWWL+AEDP QCLAACINL
Sbjct: 348 HLANLYATGGVDKLSYDGRVAFTEDHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACINL 407
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
SEALRSP PE T+SH+PVH DGSCNGLQHYAALGRDKLGA+AVNLV GD+PADVYSGIA+
Sbjct: 408 SEALRSPNPEATLSHMPVHQDGSCNGLQHYAALGRDKLGASAVNLVGGDKPADVYSGIAA 467
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
RVL+IM++DA KDP T+ QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLK
Sbjct: 468 RVLQIMKRDALKDPATDPHALHARRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 527
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
ERCA+EDDSELF+ASCYAAKTTLTALEEMFEAARSIM WL DCAKVIA TN+ VRW TP+
Sbjct: 528 ERCAVEDDSELFAASCYAAKTTLTALEEMFEAARSIMGWLGDCAKVIACTNQAVRWVTPL 587
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVA 910
GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVA
Sbjct: 588 GLPVVQPYREVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 647
Query: 911 CKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPP 970
CK+AG++FAGVHDSYWTHACDV+EMNRILREKFVELYE PILENLLE+F+K+FP L FPP
Sbjct: 648 CKQAGMNFAGVHDSYWTHACDVEEMNRILREKFVELYETPILENLLENFEKTFPNLKFPP 707
Query: 971 LPERGDFDLREVLNSQYFFN 990
LPERGD DL+EVL S YFFN
Sbjct: 708 LPERGDLDLQEVLKSPYFFN 727
>F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_11s0037g00630 PE=3 SV=1
Length = 979
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/863 (61%), Positives = 649/863 (75%), Gaps = 33/863 (3%)
Query: 133 MLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQE 192
+LR+RQVK ETEAWE +EY+E+ ++CE+KL PNLPY+K+LFLGWFEPL+ AI EQ
Sbjct: 145 LLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQR 204
Query: 193 VCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIEN 252
+ +K +AP+ LPADKMAVI MHK+MGL+M H GC RV+ AA+QIG AIE
Sbjct: 205 AQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEE-GCVRVVQAAVQIGMAIEQ 263
Query: 253 EARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXX----XXXXX 308
E RI H+ +E K +
Sbjct: 264 EVRI--------------------------HSFLEKTKNFERHKTVGHSQEGLREKEILR 297
Query: 309 XXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGS 368
S I+++K+ +V ++K ++ PWG++ +AK+G R+++LL ETAY+Q+PV+Q
Sbjct: 298 KRVKSFIRKKKIIEVQKLVKN-EEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADC 356
Query: 369 PPDIRPAFKHTFKTAMADS-QKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNN 427
PPD+RPAF+HTFKT +S QKD R+YG+IECDPLV GL+++AK+MVIPY+PML+PP
Sbjct: 357 PPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKK 416
Query: 428 WTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLD 487
W YDKG YLFLPSYVMRTHG+++Q +AVK P QL+ +FEALD+LGNTKWRIN+R+L
Sbjct: 417 WKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLS 476
Query: 488 VISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIE 547
V+ IW GG L LVDR++V I+ WK + K N ERHS RC+ E
Sbjct: 477 VVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTE 536
Query: 548 LKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLR 607
+KL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG+LEFAEGRPLGKSGLR
Sbjct: 537 IKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLR 596
Query: 608 WLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAAC 667
WLKI LANLYAGGV+KL Y+ R+AF +NHLDDVFDSAD PL G RWWL AEDP QCLAAC
Sbjct: 597 WLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAAC 656
Query: 668 INLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSG 727
INLSEALRS +P T ISH+P+H DGSCNGLQHYAALGR+ L A+AVNLV G++PADVYS
Sbjct: 657 INLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSE 716
Query: 728 IASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKR 787
IA+RV EIM++D+ KDP T+ QVDRKLVKQTVMTSVYGVTY+GAR+QIKR
Sbjct: 717 IAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKR 776
Query: 788 RLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWT 847
RL E+ I D+ LF+A+CYAAK TL AL E+F+AAR IM+WL +CAKVIAS N+PV+WT
Sbjct: 777 RLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWT 836
Query: 848 TPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMT 907
TP+GLP +QPY + R +I+TSLQVL+L+RE V++++Q TAFPPNFVHSLDGSHMMMT
Sbjct: 837 TPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMT 896
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN 967
AVAC+ AGL FAGVHDS+WTHACDVD+MN+ILREKFVELY PILENLLESFQ S P L
Sbjct: 897 AVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLT 956
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
FPPLP+RG+FDLREVL S YFFN
Sbjct: 957 FPPLPDRGNFDLREVLESPYFFN 979
>M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000868mg PE=4 SV=1
Length = 976
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/860 (60%), Positives = 650/860 (75%), Gaps = 24/860 (2%)
Query: 132 TMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQ 191
+LR+RQ+K ETEAWE EY++L + + E+KL PNLPY+K+LFLGWFEPL+ AI EQ
Sbjct: 140 NVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIAREQ 199
Query: 192 EVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIE 251
+ + K AP+ + LPADKMA+I MHK+MGL+M N GC +V+ AA+ IG AIE
Sbjct: 200 KTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVG-NQDGCVQVVQAAVHIGMAIE 258
Query: 252 NEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXX 311
E RI +E DG I +++
Sbjct: 259 QEVRIHSFLEKTKNLQKKKTGVADE-DGLSKEKEILRKRVN------------------- 298
Query: 312 SSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPD 371
LI+++++ +V ++ ++ KPWG++ +AK+G R+++LL ETAY+Q P+SQL SPPD
Sbjct: 299 -GLIRRKRLNEVQKLLIK-EEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPD 356
Query: 372 IRPAFKHTFK-TAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTR 430
+RPAF+H FK A + QK ++ YG+IECDPLV GL+K+AK+M+IPY+PMLVPP W
Sbjct: 357 VRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKG 416
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
YDKG +LFLPSYVMRTHG+++Q +A++ NQ++ +FEALD LG+TKWR+N+++L V+
Sbjct: 417 YDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVE 476
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
IW GG +A LV+R+DV I++WK V+ K N ERHSQRC+ ELKL
Sbjct: 477 SIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKL 536
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG+LEFAEGRPLGKSGLRWLK
Sbjct: 537 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLK 596
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
IHLANLYAGGV+KL YE R+AF +NH+DD+FDSA P+ G RWWL AEDPLQCLAACINL
Sbjct: 597 IHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINL 656
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
SEAL SP+P T ISH+P+H DGSCNGLQHYAALGRD L AAAVNLV GD+PADVYS IA+
Sbjct: 657 SEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAA 716
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
RV EIM++D+ KDP T+ Q+DRKLVKQTVMTSVYGVTYVGAR+QIKRRL+
Sbjct: 717 RVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 776
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
E+ I DD LF+A+CYAAK TL AL E+F+AAR IMSWL DCAKVIAS N+PVRWTTP+
Sbjct: 777 EKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPL 836
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVA 910
GLP VQPY + R +I+TSLQVL+L+RE++ V +++Q TAFPPNFVHSLDGSHMMMTA+A
Sbjct: 837 GLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALA 896
Query: 911 CKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPP 970
C+ AGL FAGVHDS+WTH CDVD+MN ILREKFVELY PILE+LLESFQ S+P L FPP
Sbjct: 897 CRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPP 956
Query: 971 LPERGDFDLREVLNSQYFFN 990
LPERGDFDL +VL S YFFN
Sbjct: 957 LPERGDFDLLQVLESPYFFN 976
>B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_911981 PE=3 SV=1
Length = 882
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/866 (60%), Positives = 643/866 (74%), Gaps = 28/866 (3%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K +LR+RQ++ ETEAWE A EY+ L+ ++CE+KL PNLPY+K L LGWFEPLK AI
Sbjct: 42 KRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAI 101
Query: 188 VAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIG 247
EQ++ K +K +P LPADKMAVI MHK+MGLLM H GC RV+ AA+QIG
Sbjct: 102 EKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHED-GCVRVVQAAVQIG 160
Query: 248 EAIENEARIXX--XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
AIE E RI E D E
Sbjct: 161 MAIEQEVRIHNFLEKTKNYQRKKTMHEVQETMDKE-----------------------KE 197
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ +V ++K D+ KPW + +AK+G R+++LL ETAY+Q PV+Q
Sbjct: 198 VLRKRVNSLIRRKRLMEVQNLVKQ-DETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQS 256
Query: 366 GGSPPDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
PPD+RPAF+H FKT + QK +++YG+IECDPL+ GL+ +AK+M+IPY PMLVP
Sbjct: 257 EDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVP 316
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG +LFLPSYVMRTHG++QQ AV+ P Q++ +FEALD+LGNTKWR+N+R
Sbjct: 317 PKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRR 376
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
LLDV+ +IWTSGG +A LVDR+D+ I+KWK V+ K N ERHSQRC
Sbjct: 377 LLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRC 436
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
+ ELKL+VARK+K+E+GFYYPHN+DFRGRAYPMHP+L HL SDLCRG+LEF EGRPLGKS
Sbjct: 437 DTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKS 496
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GLRWLKIHLANLY+GGV+KL ++ R+AF ENHL ++FDSA P+ G+RWWL+AEDP QCL
Sbjct: 497 GLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCL 556
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AACINLSEAL S +P T ISH+P+H DGSCNGLQHYAALGRD L AAAVNLV ++P+DV
Sbjct: 557 AACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDV 616
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS IA RV EI+R+D+ KDP TN QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 617 YSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQ 676
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I DD LFSA+CY AK TLTAL E+F+AAR IMSWL DCAK+IAS ++PV
Sbjct: 677 IKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPV 736
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
+WTTP+GLP VQPY + R +IKTSLQ+L+L+RE V V++Q TAFPPNFVHSLDGSHM
Sbjct: 737 QWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHM 796
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC+ AGL FAGVHDS+WTHA DVD MNRILREKFVELY PILENLLE FQ S+P
Sbjct: 797 MMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYP 856
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPPLPERG+FDL++VL S YFFN
Sbjct: 857 TLQFPPLPERGNFDLQKVLRSPYFFN 882
>B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_802205 PE=2 SV=1
Length = 982
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/866 (60%), Positives = 641/866 (74%), Gaps = 28/866 (3%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K +LR+RQ++ ETEAWE A+EY L++++CE+KL PNLPY+KSLFLGWFEPLK AI
Sbjct: 142 KRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAI 201
Query: 188 VAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIG 247
EQ++ K +K +P LPADKMAVI MHK+MGL+M H GC RV+ AA+QIG
Sbjct: 202 EREQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVMVGHED-GCVRVVQAAVQIG 260
Query: 248 EAIENEARIXX--XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
AIE E RI E D E
Sbjct: 261 IAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKE-----------------------KE 297
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ +V ++ D+ KPW ++ +AK+G R+++LL ETAY+Q PV Q
Sbjct: 298 MLRKRVNSLIRRKRLMEVQNLVIQ-DETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQS 356
Query: 366 GGSPPDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G PPD+RPAF+H FK+ + QK +++YG+IECDPL+ GL+ +AK+M+IPY PMLVP
Sbjct: 357 EGIPPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVP 416
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG +LFLPSY+MRTHG++QQ +AV+ P Q++ +FEALD+LGNTKWR+N +
Sbjct: 417 PKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGK 476
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ +IW SGG A LV+R D+ I+KWK V+ K N ERHSQRC
Sbjct: 477 VLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRC 536
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
+ ELKL+VARK+K+E+GFYYPHN+DFRGRAYPMHP+L HL SDLCRG+LEFAEGRPLGKS
Sbjct: 537 DTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKS 596
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLY+GGV+KL ++ R+AF ENHL ++FDSA+ P+ G+RWWL AEDP QCL
Sbjct: 597 GLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCL 656
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AACINLSEAL+S +P T ISH+P+H DGSCNGLQHYAALGRD AAAVNLV ++P+DV
Sbjct: 657 AACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDV 716
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS IA+RV EI+R+D+ KDP TN +VDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 717 YSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQ 776
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I DD LFSA+CYAAK TLTAL E+F+AAR IM WL DCAKVIAS ++PV
Sbjct: 777 IKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPV 836
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RWTTP+GLP VQPY + R +I+TSLQVL+L+RE V V++Q TAFPPNFVHSLDGSHM
Sbjct: 837 RWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHM 896
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC+ A L FAGVHDS+WTHA D D MNRILREKFVELY PILENLLE FQ S+P
Sbjct: 897 MMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYP 956
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FP LPERG+FDL+EVL S YFFN
Sbjct: 957 TLKFPSLPERGNFDLQEVLRSPYFFN 982
>R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025273mg PE=4 SV=1
Length = 991
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/890 (58%), Positives = 661/890 (74%), Gaps = 37/890 (4%)
Query: 104 GGANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQ 163
G + V Q VK E K +D++ K LR+RQVK ETEAWE+ EY++L +++CE+
Sbjct: 136 GLSKMVDQTVKIEHK---YIDKR---KFDSLRRRQVKEETEAWEKMVDEYRDLEKEMCEK 189
Query: 164 KLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMH 221
L PNLPY+K +FLGWF+PLK I EQ++ K +K+ +AP+ LPADKMAVI MH
Sbjct: 190 NLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMH 249
Query: 222 KLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEF 281
K+MGL+M+ H GC +V+ AA+ IG AIE E RI
Sbjct: 250 KMMGLVMSGHED-GCIQVVQAAVSIGIAIEQEVRI------------------------- 283
Query: 282 YHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEAR 341
H ++ + ++ +SLI+++++ + ++K + KPWG+ +
Sbjct: 284 -HNFLKRTRKNNAGDSQEELKEKQLLRKRVNSLIRRKRIIDALKVVKS-EGIKPWGRATQ 341
Query: 342 AKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECD 400
AK+G R+++LLIETAY+Q P++Q G S P+ RPAF+H FKT K +RRYG+IECD
Sbjct: 342 AKLGSRLLELLIETAYVQPPLTQSGDSIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECD 401
Query: 401 PLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAP 460
L+ GL+KSAK+M+IPY+PMLVPP W YDKG YLFLPSY+MRTHG+K+Q +A++
Sbjct: 402 SLLLAGLDKSAKHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDIS 461
Query: 461 YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXX 520
+FEALD+LGNTKWR+N+++LDV+ ++W GG +A LV+R+DV
Sbjct: 462 SKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPE 521
Query: 521 XIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPY 580
++ WK V+ K N ERHS RC++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+
Sbjct: 522 ELQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPH 581
Query: 581 LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDV 640
LNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANLYAGGV+KL +++R+AF E HLDDV
Sbjct: 582 LNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVETHLDDV 641
Query: 641 FDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHY 700
DSA+ P+ G+RWWL+AEDP QCLAAC+ L++AL+SP+P + ISH+P+H DGSCNGLQHY
Sbjct: 642 MDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHY 701
Query: 701 AALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQV 760
AALGRD AAAVNLV G++PADVYS I+ RV EIM+KD+ KDPE+N QV
Sbjct: 702 AALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQV 761
Query: 761 DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMF 820
DRKLVKQTVMTSVYGVTYVGAR+QIKRRL+E+ I D+ LF+A+CY+AK TL AL E+F
Sbjct: 762 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIF 821
Query: 821 EAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETD 880
EAAR+IMSWL DCAK+IAS N PVRW TP+GLP VQPY + R +I+TSLQVL+L+RE +
Sbjct: 822 EAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGN 881
Query: 881 KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILR 940
V V++Q TAFPPNFVHSLDG+HMMMTAVAC++AGL+FAGVHDSYWTHACDVD MNRILR
Sbjct: 882 TVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILR 941
Query: 941 EKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
EKFVELY PILE+LL+SFQ+S+P L FPP+P+RGDFDL+EVL SQYFFN
Sbjct: 942 EKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 991
>K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc07g005930.2 PE=3 SV=1
Length = 992
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/859 (59%), Positives = 639/859 (74%), Gaps = 37/859 (4%)
Query: 138 QVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKS 197
Q+K ETEAWE+ +EY+EL ++CE+KL PNLPY+K L LGWFEPL+ AI EQ
Sbjct: 165 QIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQ 224
Query: 198 HRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIX 257
+ +AP+ + LPADKMAVI MHKLMGLLM C +V+ AA+QIG A+ENE RI
Sbjct: 225 KHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRI- 283
Query: 258 XXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGK-----LSDXXXXXXXXXXXXXXXXXXS 312
H +E K ++
Sbjct: 284 -------------------------HNFMEKTKKHQKHMTGAQGQEDMSRETMILRKRVK 318
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
SLIK+ ++ +V +++ ++ + WG++ +AK+GCR+++LL ETAY+Q PV Q +PPDI
Sbjct: 319 SLIKRNRVVEVRKLMQS-EEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDI 377
Query: 373 RPAFKHTFKTAMADSQKDI-RRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRY 431
RPAF+H F+ A D K+I ++YG+IECDPLV G++++ K M+IPY+PMLVPP W Y
Sbjct: 378 RPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGY 437
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQ 491
DKG YLFLPSY+MRTHG+++Q +AV+ P Q++ ++EALD+LG+TKWR+N+R+L V+
Sbjct: 438 DKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVET 497
Query: 492 IWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLA 551
IW GG +A LVDR DV +++WK +V+ K N E HSQRC+ ELKL+
Sbjct: 498 IWAGGGNIAGLVDRKDVPIPELHSDDIME-LKRWKWRVRKAKKINQELHSQRCDTELKLS 556
Query: 552 VARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 611
VARK+++E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRGILEFAEGRPLGKSGLRWLK+
Sbjct: 557 VARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKV 616
Query: 612 HLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLS 671
HLA+LYAGG++KLCY++R+AF ENH+DD+ DSA PL G RWWL AEDPLQCLAACINLS
Sbjct: 617 HLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLS 676
Query: 672 EALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASR 731
EA++S +P T ISH+P+H DGSCNGLQHYAALGRD + AAAVNLV G++PADVY+ IA R
Sbjct: 677 EAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALR 736
Query: 732 VLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 791
V I+R D+ KDP T+ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRL+E
Sbjct: 737 VDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 796
Query: 792 RCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIG 851
+ I+DD LF+ASCY TL AL E+F+AAR M+WL DCAKVIAS N+PVRWTTP+G
Sbjct: 797 KGLIDDDRLLFTASCY---VTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLG 853
Query: 852 LPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVAC 911
LP VQPY + R +I+TSLQVL+L+RE D V V++Q TAFPPNFVHSLDGSHMMMTAVAC
Sbjct: 854 LPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVAC 913
Query: 912 KKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPL 971
+ AGL FAGVHDS+WTHACDVD+MNRILREKFVELY PILE+LLESFQ+S+P L FPPL
Sbjct: 914 RDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQESYPALTFPPL 973
Query: 972 PERGDFDLREVLNSQYFFN 990
P+RGDFDLREVL S YFFN
Sbjct: 974 PKRGDFDLREVLESPYFFN 992
>D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_481268 PE=3 SV=1
Length = 990
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/866 (59%), Positives = 649/866 (74%), Gaps = 31/866 (3%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE EY++L +++CE+ L PNLPY+K +FLGWF+PLK I
Sbjct: 153 KRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVI 212
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ++ K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 213 EREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 271
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE E RI H ++ + ++
Sbjct: 272 IGIAIEQEVRI--------------------------HNFLKRTRKNNAGDSQEELKEKQ 305
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LLIE AY+Q P++Q
Sbjct: 306 LLRKRVNSLIRRKRIIDALKVVK-TEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQS 364
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P+ RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 365 GDSIPEFRPAFRHKFKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 424
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A++ + +FEALD+LGNTKWR+N+
Sbjct: 425 PKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISHKTAHRVFEALDTLGNTKWRVNRN 484
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV I+ WK V+ K N ERHS RC
Sbjct: 485 ILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRC 544
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 545 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 604
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANL+AGGV+KL +++R+AF ENHLDD+ DSA+ P+ G+RWWL+AEDP QCL
Sbjct: 605 GLHWLKIHLANLFAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCL 664
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++ALRSP+P + ISH+P+H DGSCNGLQHYAALGRD AAAVNLV G++PADV
Sbjct: 665 AACVILTQALRSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADV 724
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 725 YSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQ 784
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I D+ LF+A+CY+AK TL AL E+FEAAR+IMSWL DCAK+IAS N PV
Sbjct: 785 IKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPV 844
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RW TP+GLP VQPY + R +I+TSLQVL+L+RE + V V++Q TAFPPNFVHSLDG+HM
Sbjct: 845 RWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHM 904
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC++AGL+FAGVHDSYWTHACDVD MNRILREKFVELY PILE+LL+SFQ+S+P
Sbjct: 905 MMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP 964
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP+P+RGDFDL+EVL SQYFFN
Sbjct: 965 NLVFPPVPKRGDFDLKEVLKSQYFFN 990
>Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At2g24120 PE=2 SV=1
Length = 993
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/866 (59%), Positives = 648/866 (74%), Gaps = 31/866 (3%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE EY++L +++CE+ L PNLPY+K +FLGWF+PLK I
Sbjct: 156 KRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVI 215
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ++ K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 216 EREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 274
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE E RI H ++ + ++
Sbjct: 275 IGIAIEQEVRI--------------------------HNFLKRTRKNNAGDSQEELKEKQ 308
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LLIE AY+Q P++Q
Sbjct: 309 LLRKRVNSLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQS 367
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P+ RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 368 GDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 427
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A+K + +FEALD+LGNTKWR+N+
Sbjct: 428 PKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRN 487
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV ++ WK + K N ERHS RC
Sbjct: 488 ILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRC 547
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 548 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 607
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLYAGGV+KL +++R+AF ENHLDD+ DSA+ P+ G+RWWL+AEDP QCL
Sbjct: 608 GLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCL 667
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++AL+SP+P + ISH+P+H DGSCNGLQHYAALGRD AAAVNLV G++PADV
Sbjct: 668 AACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADV 727
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 728 YSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQ 787
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I D+ LF+A+CY+AK TL AL E+FEAAR+IMSWL DCAK+IAS N PV
Sbjct: 788 IKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPV 847
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RW TP+GLP VQPY + R +I+TSLQVL+L+RE + V V++Q TAFPPNFVHSLDG+HM
Sbjct: 848 RWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHM 907
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC++AGL+FAGVHDSYWTHACDVD MNRILREKFVELY PILE+LL+SFQ+S+P
Sbjct: 908 MMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYP 967
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP+P+RGDFDL+EVL SQYFFN
Sbjct: 968 NLVFPPVPKRGDFDLKEVLKSQYFFN 993
>M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra039230 PE=3 SV=1
Length = 979
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/866 (59%), Positives = 649/866 (74%), Gaps = 31/866 (3%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE +EY++L +++CE+ L PNLPY+K +FLGWF+PLK I
Sbjct: 142 KRKFDSLRRRQVKEETEAWERMVEEYRDLEKEMCEKSLAPNLPYVKHMFLGWFQPLKEVI 201
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ + K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 202 EREQRLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 260
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE+E RI H ++ + ++
Sbjct: 261 IGIAIEHEVRI--------------------------HNFLKRTRKNNAGDSQEELKDKQ 294
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LL+ETAY+Q P++Q
Sbjct: 295 LLRKRVNSLIRRKRIIDALKVVKS-EGIKPWGRATQAKLGSRLLELLMETAYVQPPLTQS 353
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P+ RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 354 GDSIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 413
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A+K +FEALD+LGNTKWR+N++
Sbjct: 414 PKRWRGYDKGGYLFLPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRK 473
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV ++ WK V+ K N ERHS RC
Sbjct: 474 ILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKAKKTNRERHSLRC 533
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 534 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 593
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLYAGGV+KL +E R++F ENHLDD+ DSA+ + GRRWWL+AEDP QCL
Sbjct: 594 GLYWLKIHLANLYAGGVEKLSHEGRLSFVENHLDDIMDSAENAIHGRRWWLKAEDPFQCL 653
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++AL+SP+P + ISH+P+H DGSCNGLQHYAALGRD AAAVNLV G++PADV
Sbjct: 654 AACVVLAQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADV 713
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 714 YSEISLRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQ 773
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I D+ LFSA+CY+AK TL AL E+FEAAR+IMSWL DCAK+IA+ N PV
Sbjct: 774 IKRRLEEKGVITDERMLFSAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIATDNHPV 833
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RWTTP+GLP VQPY + R +I+TSLQVL+L+RE + V V++Q TAFPPNFVHSLDG+HM
Sbjct: 834 RWTTPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHM 893
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC++AGL+FAGVHDSYWTHACDVD MNRILREKFVELY PILE+LL+SFQ+S+P
Sbjct: 894 MMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYP 953
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP+P+RG FDL+EVL SQYFFN
Sbjct: 954 NLVFPPVPKRGGFDLKEVLKSQYFFN 979
>K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 812
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/844 (65%), Positives = 645/844 (76%), Gaps = 49/844 (5%)
Query: 1 MWAHLAKR---TFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS 57
MW +LAKR T + NF++ S SP RF + Q+ G +VGV
Sbjct: 1 MWTNLAKRASSTLRNNFRVSSLSP--RFC------------KPQTCKTFQGFPEVGV--- 43
Query: 58 INELGRSNFSLFE----YPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMV 113
+S F E S + L RG+ASVAEAI S+DTE+D +EV++++
Sbjct: 44 ----SQSKFVFHEGFSCSSSWSWSWMVLGRGHASVAEAI-ESTDTEDD----YDEVQKLL 94
Query: 114 KKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMK 173
++ K + +D + YK +L++RQ++ ETEAW EAA+EY ELLED+ ++KL PNLPYMK
Sbjct: 95 EEMAKAEHKVD-SSSYKYKLLKRRQIESETEAWAEAAREYGELLEDMRDKKLAPNLPYMK 153
Query: 174 SLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG 233
SLFLGWFEPL++AI+A+Q++CK S +M+HAPYFNDLPAD MAV+TMHKLM LLMTN NG
Sbjct: 154 SLFLGWFEPLRNAILADQDLCKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNANG 213
Query: 234 IGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIE-NGKLS 292
+G ARVI AA QIGEA+ENEARI E+ + + A +E +GKL+
Sbjct: 214 VGTARVIQAACQIGEAVENEARIYQFMKR------------EKENKSSHLAPVEQSGKLT 261
Query: 293 DXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLL 352
+ + L+K+QK Q MGII DDWK WGQEA+ KVG R+MQLL
Sbjct: 262 EENGEMEQKQSRLRKRV--AGLMKKQKKLQAMGIIGRQDDWKTWGQEAQVKVGSRLMQLL 319
Query: 353 IETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAK 412
IETAYIQ P +Q+G PPDI PAF+HT +T +SQ++ RRYG+IECDPLV GLEKSA+
Sbjct: 320 IETAYIQPPTNQIGDGPPDIHPAFRHTLRTLSNESQRETRRYGVIECDPLVQNGLEKSAR 379
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALD 472
+MVIPY+PMLVPP NWT YDKGAYLFLPSYVMR HGAKQQ EAVKRAP +QL+P+FEAL+
Sbjct: 380 HMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALN 439
Query: 473 SLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTI 532
+LGNTKWR+N+R+L VI QIW +GGRLADLVDR++V IRKWK +VK +
Sbjct: 440 TLGNTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPSPKEPDTIDEAEIRKWKWKVKAV 499
Query: 533 MKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 592
KEN+ERHSQRC+IELKLAVARKMK+E+ FYYPHN+DFRGRAYPMHPYLNHLGSDLCRGI
Sbjct: 500 KKENSERHSQRCDIELKLAVARKMKDEEAFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 559
Query: 593 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRR 652
LEFAEGR LGKSGLRWLKIHLANLYAGGVDKL Y+ R++FTENHLDD+FDSADRPLEG+
Sbjct: 560 LEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEGKH 619
Query: 653 WWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAA 712
WWL+AEDP QCLAACINLSEALRSPTPETTISH+PVH DGSCNGLQHYAALGRDKLGAAA
Sbjct: 620 WWLQAEDPFQCLAACINLSEALRSPTPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAA 679
Query: 713 VNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTS 772
VNLV GD+PADVYSGIA+RVLEIM++DAEKDP TN QVDRKLVKQTVMTS
Sbjct: 680 VNLVGGDQPADVYSGIAARVLEIMKRDAEKDPRTNPNALHARRLISQVDRKLVKQTVMTS 739
Query: 773 VYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLAD 832
VYGVTY+GARDQIKRRLKERCAIEDD ELF+ASCYAAKTTLTALEEMFEAARSIM WL D
Sbjct: 740 VYGVTYIGARDQIKRRLKERCAIEDDVELFAASCYAAKTTLTALEEMFEAARSIMGWLGD 799
Query: 833 CAKV 836
CAKV
Sbjct: 800 CAKV 803
>M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1767
Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/876 (58%), Positives = 635/876 (72%), Gaps = 38/876 (4%)
Query: 125 RKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLK 184
R + K LR+RQ+K ETEAWE AA+EY+EL ++ E+KL P+LPY+KSLFLGWFEPL+
Sbjct: 892 RAERRKYNSLRRRQIKAETEAWERAAQEYKELEREMLEKKLAPSLPYVKSLFLGWFEPLR 951
Query: 185 SAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAAL 244
I EQ + K +K +AP+ LPADKMAVI MHK+MGLLM GC R++ AA+
Sbjct: 952 DVIEREQRLQKTKMQKAAYAPHIGLLPADKMAVIVMHKMMGLLMVGQED-GCIRLVQAAI 1010
Query: 245 QIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKL-----SDXXXXXX 299
+IGEAIE E +I A +E K ++
Sbjct: 1011 RIGEAIEQEFKI--------------------------QAYLEKSKRPRRRKNEGDRNVI 1044
Query: 300 XXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ 359
LIK +K+ +V +++ + + WG++ +AK+G R+++LL+E+A++Q
Sbjct: 1045 LCTQQEILRKKVMKLIKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQ 1104
Query: 360 SPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYL 419
P L PP+I PAF+HTFK ++ K I RYG+IECDPLV KG + +A++MVIPYL
Sbjct: 1105 VPCDSLADCPPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYL 1164
Query: 420 PMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKW 479
PML+PP +W YD G +LFLPSYVMRTHGA++Q +A+K P QL+ +FEALD+LG TKW
Sbjct: 1165 PMLIPPKSWKGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKW 1224
Query: 480 RINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNER 539
RIN+R+LDVI +W+ GG +A LVDR D+ I+KW+ + K N+E
Sbjct: 1225 RINRRILDVIEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEM 1284
Query: 540 HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 599
H+QRC++ELKL+VA KM++E+GFYYPHN+DFRGRAYPMH +LNHL SDLCRGILEFAEG+
Sbjct: 1285 HAQRCDVELKLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGK 1344
Query: 600 PLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAED 659
PLGKSGL WLKIHLAN+Y GGV+KL Y+ R+ F +NHL D+FDSA+ P++G RWW+ AED
Sbjct: 1345 PLGKSGLHWLKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAED 1404
Query: 660 PLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGD 719
P QCLAACI+L++AL+S +P ISH+P+H DGSCNGLQHYAALGRD L AAAVNLV G+
Sbjct: 1405 PFQCLAACIDLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGE 1464
Query: 720 RPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYV 779
+PADVYS IA RV EI+RKD+EKDP + QVDRKLVKQTVMTSVYGVTYV
Sbjct: 1465 KPADVYSEIAMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYV 1524
Query: 780 GARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAS 839
GAR+QIKRRL+E+ I DD LF ASCYAAK TL AL EMFEAAR IM WL DCAK+IAS
Sbjct: 1525 GAREQIKRRLEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIAS 1584
Query: 840 TNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE-TDKVLVKRQSTAFPPNFVHS 898
NEPV+WTTP+GLP VQPYR R I+TSLQVL+L+RE +V VKRQ TAFPPN+VHS
Sbjct: 1585 ENEPVKWTTPLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSQVSVKRQKTAFPPNYVHS 1644
Query: 899 LDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLES 958
LDGSHMMMTA++CK AGL FAGVHDS+WTHACDVD MN+ILRE+FV LY PILENLL+
Sbjct: 1645 LDGSHMMMTAISCKNAGLHFAGVHDSFWTHACDVDRMNQILREEFVALYNIPILENLLDG 1704
Query: 959 FQKSFPKLNFPPLPERGDFDLREVLNSQ-----YFF 989
FQ SFP L FPPLP+RGDFDL++VL +FF
Sbjct: 1705 FQTSFPTLTFPPLPDRGDFDLKKVLEQNNNIFSFFF 1740
>M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004010 PE=3 SV=1
Length = 902
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/984 (55%), Positives = 670/984 (68%), Gaps = 101/984 (10%)
Query: 8 RTFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS-INELGRSNF 66
R R FK S SPS N + IL S+ + GS Q T+ ++LGR++
Sbjct: 19 RATSRKFKPFSGSPS------GNKIHSIL-----SSIELVGSLQNRPPTNPFHQLGRASS 67
Query: 67 SLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGKPLLDRK 126
L F +A+ +AI E+D S G+ EV +++ + G
Sbjct: 68 VLHGQRFA----------FATATQAI------EDDSSSGSEEVNELMTETGMG------- 104
Query: 127 AKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSA 186
A+ K L++RQV++ETE WE AA+E +E++ED+CEQKL PNLPY+KSLFLGWFEPL+ A
Sbjct: 105 AQKKYHSLKQRQVRLETEEWERAARECREIIEDMCEQKLAPNLPYVKSLFLGWFEPLRDA 164
Query: 187 IVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQI 246
I A+ + K K+ +APY LPAD MAVITMHK+M LLMTN G+G RV++AA +
Sbjct: 165 IRADLDAFKVKRGKIPYAPYMELLPADMMAVITMHKMMALLMTNAEGVGVVRVVNAATNV 224
Query: 247 GEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXX 306
GEAIE EARI + GE E KL
Sbjct: 225 GEAIEQEARIKSFMQKGKMKNATSNTEAVDALGE--TGTKEAVKLK-------------- 268
Query: 307 XXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
++L+K+ K+++V GI+K D +KPWGQEA+ KVG R++QLL+ETAYIQ P Q
Sbjct: 269 --KQINTLLKKHKVRRVSGIVKAHDSFKPWGQEAQVKVGARLIQLLLETAYIQPPAEQFD 326
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPN 426
PP+IRPAFK T K ++ K RRYG IECDPL+ KGL+KSA+++VIPYLPML+PP
Sbjct: 327 DGPPEIRPAFKQTSKNVTLENTKLSRRYGCIECDPLIRKGLDKSARHVVIPYLPMLIPPR 386
Query: 427 NWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLL 486
NWT YD+GA+ FLPSY+MRT+G+KQQ V + P QLEP+F+ALD+LGNTKWRIN+++L
Sbjct: 387 NWTGYDQGAHFFLPSYLMRTNGSKQQRIVVNKTPKAQLEPVFKALDTLGNTKWRINKKVL 446
Query: 487 DVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEI 546
++ +IW +GGRL LVDRDDV +++WK + K KEN+ERHSQRC++
Sbjct: 447 SLVDRIWANGGRLGGLVDRDDVPIPEEPDGEDQEELKQWKWKFKEANKENSERHSQRCDV 506
Query: 547 ELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 606
ELKL VARKMKEE+GFY+PHNVDFRGRAYPMHPYLNHLGSDLCRGILEF EG+PLG+SGL
Sbjct: 507 ELKLEVARKMKEEEGFYFPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGL 566
Query: 607 RWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAA 666
RWLK+H+ANLYAGGVDK
Sbjct: 567 RWLKVHIANLYAGGVDKGSLS--------------------------------------- 587
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
ALRS PE ISH+P+H DGSCNGLQHYAALGRDK GAAAVNL G++PAD+Y+
Sbjct: 588 ------ALRSSVPEAAISHIPIHQDGSCNGLQHYAALGRDKTGAAAVNLFTGEKPADIYA 641
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
IA+RVL+IM+KDAE+DPET QVDRKLVKQTVMT+VYGVTY GAR+QIK
Sbjct: 642 DIAARVLKIMQKDAEEDPET---FPYAKLMLDQVDRKLVKQTVMTTVYGVTYSGARNQIK 698
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRW 846
+RLKER A DDS+ F A+ YAA+ T ALEEMF AAR+IM W +CAK+IAS N+PV W
Sbjct: 699 KRLKERGAFADDSQNFHAAYYAARVTTNALEEMFGAARAIMIWFGECAKIIASQNKPVCW 758
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMM 906
TTP+GLP VQPYRQ GR ++KT+LQVL+++R+T+KV ++Q TAF PNFVHSLD SHMMM
Sbjct: 759 TTPLGLPVVQPYRQPGRHLVKTTLQVLTIKRDTEKVKARKQMTAFAPNFVHSLDASHMMM 818
Query: 907 TAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKL 966
TAVAC KAGL FAGVHDS+WTHA DVD MNRILREKFVELY+ P+LENLLESFQKSFP L
Sbjct: 819 TAVACNKAGLSFAGVHDSFWTHASDVDVMNRILREKFVELYDKPVLENLLESFQKSFPSL 878
Query: 967 NFPPLPERGDFDLREVLNSQYFFN 990
FPPLPERGDFDLREV+ S YFFN
Sbjct: 879 RFPPLPERGDFDLREVIRSPYFFN 902
>Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT3 PE=2 SV=1
Length = 989
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/862 (58%), Positives = 638/862 (74%), Gaps = 26/862 (3%)
Query: 130 KDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVA 189
K +LR+RQ+K ETEAWE +EY+E + ++ ++KL PNLP +K+LFLGWFEPLK AI
Sbjct: 153 KYNLLRRRQIKAETEAWESMVEEYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEK 212
Query: 190 EQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEA 249
EQ+ + +K + + + LPADKMAVI MHK+M LLM N GC R++ AALQIG A
Sbjct: 213 EQKSQRSRKQKAIYGYHIDMLPADKMAVIVMHKMMSLLMVG-NDAGCVRLVQAALQIGTA 271
Query: 250 IENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXX 309
IE E +I + P+ I+ ++
Sbjct: 272 IEQEIKIHSFLEKTKNIRKNAS---DLPEDLLKEKEIQRNRVK----------------- 311
Query: 310 XXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP 369
SLIK++++ + ++ +D K W Q+ +AK+G R+++LLI+TAYIQ P SQ +P
Sbjct: 312 ---SLIKRKRLFEAAKLVTS-EDSKSWSQDTQAKLGSRLIELLIDTAYIQHPTSQSADTP 367
Query: 370 PDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNW 428
PD+RPAF+H FK + Q+ ++RYG+IECDPLV KG+++SA+ M+IPY+PML+PP NW
Sbjct: 368 PDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKNW 427
Query: 429 TRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDV 488
YDKG YLFLPSYVMRTHG+++Q +A+++ P Q++ +FEAL++LG+TKWRIN+++L V
Sbjct: 428 KGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLGV 487
Query: 489 ISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIEL 548
+ +W SGG + LV+ DDV I WK V+ K N ERH+ RC++EL
Sbjct: 488 VENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVEL 547
Query: 549 KLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRW 608
K++VA+KMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG+LEFA GRPLGK+GL W
Sbjct: 548 KISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRPLGKTGLHW 607
Query: 609 LKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACI 668
LKIHLAN+YAGGVDKL YE+R AF ENHL++VFDSA P+ G RWWL AEDP QCLAACI
Sbjct: 608 LKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQCLAACI 667
Query: 669 NLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGI 728
+L+ AL S +P + IS++P+H DGSCNGLQHYAALGRD AAAVNLV G+ PADVYS I
Sbjct: 668 DLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEEPADVYSEI 727
Query: 729 ASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
A RV EIM KD+ KDP+T+ QVDRKLVKQTVMTSVYGVT+VGAR+QIKRR
Sbjct: 728 AVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 787
Query: 789 LKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
L+E+ I DD LFSA+CY+AK T++AL ++F+AAR IM WL DCAKVIAS N+PVRWTT
Sbjct: 788 LEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTT 847
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
P+GLP VQPY + R +IKTSLQVL+L++E + + VK+Q TAFPPN+VHSLDG+HMMMTA
Sbjct: 848 PLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVHSLDGTHMMMTA 907
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
VAC+ AGL FAGVHDS+WTHACDV++MN+ILR KFVELY PILENLLESFQ ++P F
Sbjct: 908 VACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESFQTAYPASTF 967
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERGDFDL EVL S YFFN
Sbjct: 968 PPLPERGDFDLEEVLESPYFFN 989
>I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=2
Length = 951
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/871 (57%), Positives = 637/871 (73%), Gaps = 24/871 (2%)
Query: 122 LLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFE 181
L D + + K +LR+RQ+K ETEA E+ +EY+EL ++ E+ L PNLP++K+LFLGWF+
Sbjct: 103 LNDIEEEKKLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFD 162
Query: 182 PLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
PLK AI AEQ+ + K AP+ + LPA K+AVI MHK+MGL+ + GC ++
Sbjct: 163 PLKEAIEAEQKSKRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVD 222
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
AA+QIG A+E E RI +E +++N K
Sbjct: 223 AAVQIGMAVEQEVRIHKFLEKTRSHQSKKTEAGDE-------DSMDNDK----------- 264
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSP 361
+ LIK+++++QV ++K + PWG++ +AK+G R+++LLIETA++ SP
Sbjct: 265 ---QKLRKHVNGLIKRRRLKQVQMLLKEKES-GPWGRDTQAKLGSRLIELLIETAFVHSP 320
Query: 362 VSQLGGSPPDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLP 420
V+Q +PPDIRPAF+H FK + QK ++ YG+IECDPLV G++KS K+M++PY+P
Sbjct: 321 VNQSADTPPDIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMP 380
Query: 421 MLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWR 480
MLVPP W Y+KG +LFLPSY+MRTHG+K+Q + +K Q++ +FEALD+LGNTKWR
Sbjct: 381 MLVPPKKWKGYEKGGHLFLPSYIMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWR 440
Query: 481 INQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERH 540
+N+RLL+V+ +W GG +A L+DR DV I++WK V+ K N ERH
Sbjct: 441 VNRRLLNVVESLWAGGGNIAGLIDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERH 500
Query: 541 SQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
S RC+ ELKL+VA+KMK+E+GFYYPHNVDFRGRAYPMH +LNHL DLCRG+LEFAEGRP
Sbjct: 501 SLRCDTELKLSVAQKMKDEEGFYYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRP 560
Query: 601 LGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDP 660
LG+SGL WLKIHLANLYAGG++KL Y+ R+AF ENHL D+FDSAD P+ G RWWL A+DP
Sbjct: 561 LGESGLCWLKIHLANLYAGGIEKLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDP 620
Query: 661 LQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDR 720
QCLAACINLSEALRS +P + I H+P+H DGSCNGLQHYAALGRD L AAAVNLV ++
Sbjct: 621 FQCLAACINLSEALRSSSPNSVILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEK 680
Query: 721 PADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVG 780
PADVYS IA RV +IMRKD KDP Q+DRKLVKQTVMTSVYGVT+VG
Sbjct: 681 PADVYSEIAVRVHDIMRKDCIKDPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVG 740
Query: 781 ARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST 840
AR+QIKRRL+E+ I D+ LF+A+CYAAK TLTAL E+F AAR IM WL DCAKVIA
Sbjct: 741 AREQIKRRLEEKGLITDEKLLFAAACYAAKVTLTALGEIFGAARVIMGWLGDCAKVIAFE 800
Query: 841 NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLD 900
N+PVRWTTP+GLP VQPY + R +IKTSLQ L+LRRE + V K+Q +AFPPNFVHSLD
Sbjct: 801 NQPVRWTTPLGLPVVQPYCKTERHLIKTSLQFLALRREGNAVDAKKQRSAFPPNFVHSLD 860
Query: 901 GSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQ 960
GSHMMMTA+AC+ AGL FAGVHDS+WTHACDV++M++ILREKFVELY PILENLLE F+
Sbjct: 861 GSHMMMTALACRDAGLCFAGVHDSFWTHACDVEKMSQILREKFVELYSMPILENLLEGFE 920
Query: 961 KSFPKLNFPPLPE-RGDFDLREVLNSQYFFN 990
S+P L FPPLPE RGDFDL++VL S YFFN
Sbjct: 921 TSYPGLTFPPLPERRGDFDLQKVLESPYFFN 951
>K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 973
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/873 (57%), Positives = 634/873 (72%), Gaps = 37/873 (4%)
Query: 126 KAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKS 185
K + K +LR+RQ++ ETEAWE+ +EY+EL ++ E+ L PNLP++KSL LGWFEP ++
Sbjct: 130 KEREKYNLLRRRQIEAETEAWEKMVEEYRELEREMREKMLAPNLPHVKSLLLGWFEPFRA 189
Query: 186 AIVAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAA 243
A+ AEQ + +K + AP+ +DLPADK+AVI MHK+M ++M N G C +++HAA
Sbjct: 190 AVEAEQTAHRARPKKQQDSIAPHVDDLPADKVAVIVMHKMMAMVMENEEG--CVQLVHAA 247
Query: 244 LQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXX----- 298
+ IG A+E E RI H +E K S
Sbjct: 248 VHIGMALEQEVRI--------------------------HKFVEGNKSSQSKKTEGDAED 281
Query: 299 XXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYI 358
+SL+K+ ++++V I++ ++ PW ++ +AK+G R+++LLI+TAY+
Sbjct: 282 SLDSDKEKQRNYLNSLLKKNRLREVQMILRK-EECSPWSRDTQAKLGSRLVELLIDTAYV 340
Query: 359 QSPVSQLGGSPPDIRPAFKHTFKTA-MADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP 417
SPV+Q +PPDIRPAF+H FK QK ++YGII+CDPLV GLEK AK+M+IP
Sbjct: 341 HSPVNQSADTPPDIRPAFRHGFKAVPWHPGQKFSKKYGIIQCDPLVLVGLEKCAKHMLIP 400
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNT 477
Y+PML+PP W YDKG +LFLPSY+MRTHG+K+Q + +K Q++ +FEALD LGNT
Sbjct: 401 YMPMLIPPKKWKGYDKGGHLFLPSYIMRTHGSKKQQDVMKNVDGAQMQKVFEALDILGNT 460
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
KWR+N+R+L V+ IW GG +A LVD DV I++WK V+ K N
Sbjct: 461 KWRVNRRVLGVVESIWAGGGNIAGLVDCKDVPKPDKPLVEDLKLIQEWKCNVRKAKKINL 520
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
ERHS RC+ ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHLGSDLCRG+LEFAE
Sbjct: 521 ERHSLRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 580
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
GRPLGKSGLRWLKIHLANLYAGG++K Y+ R+ F E+H+ D+FDSAD P+ G RWWL A
Sbjct: 581 GRPLGKSGLRWLKIHLANLYAGGIEKQSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTA 640
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
EDP QCLAACINLSEALRS +P + ISH+P+H DGSCNGLQHYAALGRD L AAAVNLV
Sbjct: 641 EDPFQCLAACINLSEALRSSSPNSFISHLPIHQDGSCNGLQHYAALGRDDLEAAAVNLVA 700
Query: 718 GDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
++PADVY+ IA RV +IMR+D+ KDP+T Q+DRKLVKQTVMTSVYGVT
Sbjct: 701 KEKPADVYTEIAVRVYDIMRQDSNKDPDTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 760
Query: 778 YVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
Y+GAR+QIKRRL E+ + DD L++ASCYAAK TL AL E+FEAAR IM WL DCAKVI
Sbjct: 761 YIGAREQIKRRLGEKGFVTDDRLLYAASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVI 820
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVH 897
A N+ V WTTP+GLP VQPY + R I+TSLQ+L+L+RE V VK+Q +AFPPNFVH
Sbjct: 821 ACENQAVCWTTPLGLPVVQPYCKTERYQIRTSLQLLALQREGSAVSVKKQRSAFPPNFVH 880
Query: 898 SLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLE 957
SLD SHMMMTA+AC AGL FAGVHDS+WTH CDV++MN+ILREKFVELY PILENLLE
Sbjct: 881 SLDSSHMMMTALACNDAGLCFAGVHDSFWTHPCDVEKMNQILREKFVELYNMPILENLLE 940
Query: 958 SFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
FQ ++P L FPPLP+RGDFDL++VL+S YFFN
Sbjct: 941 GFQTTYPGLAFPPLPKRGDFDLQKVLDSPYFFN 973
>I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 943
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/855 (55%), Positives = 625/855 (73%), Gaps = 24/855 (2%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
+RQVK ETEAW AA+EY++L ++ ++ L P+LPY+KSLFLGWFEPL+ AI +QEV +
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQR 172
Query: 196 KSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEAR 255
+ K +A Y LPA+K++VI MHK+MGLLM+N +G G RV+ AA IGEA+E E +
Sbjct: 173 RKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVEREFK 232
Query: 256 IXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLI 315
+ F+ + GK + SL+
Sbjct: 233 VQA----------------------FFQKTRKKGK--NGENDPALGKEQAKCRKLVKSLV 268
Query: 316 KQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPA 375
K++K+ + +++ + + WG EA+ K+G R+++LL+++A++QSP Q+ S PD RPA
Sbjct: 269 KRRKLTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPA 328
Query: 376 FKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGA 435
FKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YDKG
Sbjct: 329 FKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGG 388
Query: 436 YLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+N+R+ DV+ IW+
Sbjct: 389 HLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSR 448
Query: 496 GGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARK 555
GG +A LVD+ D+ I+KWK +K K N E H++RC+ ELKL+VARK
Sbjct: 449 GGGIAGLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARK 508
Query: 556 MKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 615
M+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN
Sbjct: 509 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLAN 568
Query: 616 LYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR 675
Y GG++KL + S++AF ENHL D+FDSA P++G RWW+ AEDP QCLAAC++LS AL+
Sbjct: 569 KYGGGIEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALK 628
Query: 676 SPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
S +P T ISH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+RVL++
Sbjct: 629 SSSPHTAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDV 688
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+R+D+ KDP T++ QVDRKLVKQTVMTSVYGVT++GAR QI +RL+E+ I
Sbjct: 689 VREDSMKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHI 748
Query: 796 EDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAV 855
DD L+ SCYA + TL AL +MF++AR+IM+WL DCAK+IAS N+PV+WT+P+GLP V
Sbjct: 749 TDDKLLYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKNQPVKWTSPVGLPVV 808
Query: 856 QPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAG 915
QPY++ +I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+AG
Sbjct: 809 QPYKKYKNYMIRTSLQCLALRREGDTIATQRQKAAFPPNFVHSLDSSHMMMTAITCKEAG 868
Query: 916 LDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERG 975
L FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLLE FQ SFP + FPP P +G
Sbjct: 869 LHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTSFPTVEFPPCPAQG 928
Query: 976 DFDLREVLNSQYFFN 990
+FD+REVL S YFFN
Sbjct: 929 NFDVREVLTSTYFFN 943
>A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_23934 PE=3 SV=1
Length = 950
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/866 (55%), Positives = 628/866 (72%), Gaps = 2/866 (0%)
Query: 125 RKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLK 184
RKA+++ LR+RQVK ETEAW AA EY+EL ++ +++L P LPY+KSLFLGWFEPL+
Sbjct: 87 RKAEHR--RLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLR 144
Query: 185 SAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAAL 244
AI +QEV ++ K +A Y LPADK+AVI MHK+MGLLM++ +G+ RV+ AA
Sbjct: 145 DAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAH 204
Query: 245 QIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXX 304
IGEA+E E R+ + + + K S
Sbjct: 205 CIGEAVERENRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQ 264
Query: 305 XXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQ 364
SL++++K+ + I++ + + WG E++ K+G R+++LL+++A++QSP Q
Sbjct: 265 AKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQ 324
Query: 365 LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
S PDIRPAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLV
Sbjct: 325 TPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVT 384
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YD G YLFLPSY+MRTHG K Q EA+K P QL +FEALD+LG+TKWR+N+R
Sbjct: 385 PKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRR 444
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+ + + IW+ GG +A LVD++++ I+KWK +K K N E H++RC
Sbjct: 445 VHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERC 504
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
+ ELKL+VARKM+EE GFYYPHN+DFRGRAYPMH +L+HLGSDLCRG+LE+AEGRPLGKS
Sbjct: 505 DTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKS 564
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GLRWLKIHLAN Y GG++KL +E +VAF EN L D+FDSA P++G WW+ AEDP QCL
Sbjct: 565 GLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCL 624
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC++LS+AL+S +P+ +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV GD+PAD+
Sbjct: 625 AACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADI 684
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS IA+RVL+++R+D+ +DP TN QVDRKLVKQTVMTSVYGVTY+GAR Q
Sbjct: 685 YSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQ 744
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
I +RL+E+ I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N PV
Sbjct: 745 ITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENYPV 804
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
+WT+P+GLP VQPY++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHM
Sbjct: 805 KWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHM 864
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTA+ACKKAGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLL+ FQ SFP
Sbjct: 865 MMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFP 924
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP P +GDFD+REVL S YFFN
Sbjct: 925 TLEFPPCPSQGDFDVREVLASTYFFN 950
>B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_22187 PE=3 SV=1
Length = 946
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/857 (55%), Positives = 622/857 (72%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA EY+EL ++ +++L P LPY+KSLFLGWFEPL+ AI +QEV
Sbjct: 90 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 149
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LPADK+AVI MHK+MGLLM++ +G+ RV+ AA IGEA+E E
Sbjct: 150 QRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVERE 209
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
R+ + + + K S S
Sbjct: 210 NRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQAKCRKRVKS 269
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L++++K+ + I++ + + WG E++ K+G R+++LL+++A++QSP Q S PDIR
Sbjct: 270 LVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIR 329
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLV P W YD
Sbjct: 330 PAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDT 389
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G YLFLPSY+MRTHG K Q EA+K P QL +FEALD+LG+TKWR+N+R+ + + IW
Sbjct: 390 GGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIW 449
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD++++ I+KWK +K K N E H++RC+ ELKL+VA
Sbjct: 450 SRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKLSVA 509
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMH +L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHL
Sbjct: 510 RKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHL 569
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GG++KL +E +VAF EN L D+FDSA P++G WW+ AEDP QCLAAC++LS+A
Sbjct: 570 ANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDA 629
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L+S +P+ +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV GD+PAD+YS IA+RVL
Sbjct: 630 LKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVL 689
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
+++R+D+ +DP TN QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+
Sbjct: 690 DVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKG 749
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N PV+WT+P+GLP
Sbjct: 750 LITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHPVKWTSPVGLP 809
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPY++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACKK
Sbjct: 810 VVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHMMMTAIACKK 869
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLL+ FQ SFP L FPP P
Sbjct: 870 AGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPS 929
Query: 974 RGDFDLREVLNSQYFFN 990
+GDFD+REVL S YFFN
Sbjct: 930 QGDFDVREVLASTYFFN 946
>Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT2 PE=2 SV=1
Length = 953
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/866 (55%), Positives = 628/866 (72%), Gaps = 27/866 (3%)
Query: 125 RKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLK 184
RKA+++ LR+RQVK ETEAW AA EY+EL ++ +++L P LPY+KSLFLGWFEPL+
Sbjct: 115 RKAEHR--RLRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLR 172
Query: 185 SAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAAL 244
AI +QEV ++ K +A Y LPADK+AVI MHK+MGLLM++ +G+ RV+ AA
Sbjct: 173 DAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAH 232
Query: 245 QIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXX 304
IGEA+E E ++ F+ + K S
Sbjct: 233 CIGEAVEREFKVQT----------------------FFQ---KTRKKSAGENDLALEKEQ 267
Query: 305 XXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQ 364
SL++++K+ + I++ + + WG E++ K+G R+++LL+++A++QSP Q
Sbjct: 268 AKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQ 327
Query: 365 LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
S PDIRPAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLV
Sbjct: 328 TPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVT 387
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YD G YLFLPSY+MRTHG K Q EA+K P QL +FEALD+LG+TKWR+N+R
Sbjct: 388 PKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRR 447
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+ + + IW+ GG +A LVD++++ I+KWK +K K N E H++RC
Sbjct: 448 VHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERC 507
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
+ ELKL+VARKM+EE GFYYPHN+DFRGRAYPMH +L+HLGSDLCRG+LE+AEGRPLGKS
Sbjct: 508 DTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKS 567
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GLRWLKIHLAN Y GG++KL +E +VAF EN L D+FDSA P++G WW+ AEDP QCL
Sbjct: 568 GLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCL 627
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC++LS+AL+S +P+ +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV GD+PAD+
Sbjct: 628 AACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADI 687
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS IA+RVL+++R+D+ +DP TN QVDRKLVKQTVMTSVYGVTY+GAR Q
Sbjct: 688 YSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQ 747
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
I +RL+E+ I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N PV
Sbjct: 748 ITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHPV 807
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
+WT+P+GLP VQPY++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHM
Sbjct: 808 KWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHM 867
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTA+ACKKAGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLL+ FQ SFP
Sbjct: 868 MMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFP 927
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP P +GDFD+REVL S YFFN
Sbjct: 928 TLEFPPCPSQGDFDVREVLASTYFFN 953
>K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc02g089340.2 PE=3 SV=1
Length = 711
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/713 (68%), Positives = 573/713 (80%), Gaps = 31/713 (4%)
Query: 278 DGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWG 337
DGE HA +E KL +SL+K+QK++ V I++ DD KPWG
Sbjct: 30 DGE--HATLEQKKLH----------------KKVTSLMKKQKLRAVNQIVRSQDDSKPWG 71
Query: 338 QEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGII 397
Q+A+AKVG R+++ L++TAYIQSP QL PPDIRPAF H+ +T +++ RRYG+I
Sbjct: 72 QDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVI 131
Query: 398 ECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVK 457
+CD LV KGLE++A++MVIPY+PMLVPP WT YDKG +L+LPSYVMRTHGA+QQ EAVK
Sbjct: 132 QCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVK 191
Query: 458 RAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXX 517
R NQL+P+FEALD+LG+TKWRIN+R+L V+ +IW GGRLADLVDRDDV
Sbjct: 192 RTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTE 251
Query: 518 XXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPM 577
KW+ +VK++ KEN ERHSQRC+IELKLAVA +MK+E+GF+YPHNVDFRGRAYPM
Sbjct: 252 DEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPM 311
Query: 578 HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHL 637
HP+LNHLGSD+CRG+LEFA GRPLGKSGL +K D C ++FTE+HL
Sbjct: 312 HPHLNHLGSDICRGVLEFAAGRPLGKSGLALVK-----------DTPC--KFISFTESHL 358
Query: 638 DDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGL 697
DD+FDSAD+PLEGR WWL AEDP QCLA CINLSEA+RS +PET ISHVPVH DGSCNGL
Sbjct: 359 DDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGL 418
Query: 698 QHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXX 757
QHYAALGRDKLGAAAVNLV G++PADVYSGIA+RVL+IM +DA++DP
Sbjct: 419 QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLV 478
Query: 758 XQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALE 817
QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER AI DD+ELF A+CYAAK TLTAL
Sbjct: 479 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALG 538
Query: 818 EMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR 877
EMFEAARSIM+WL +CAK+IAS NEPVRWTTP+GLP VQPYR+IGR IKTSLQ+L+L+R
Sbjct: 539 EMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQR 598
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
ET+KV+VKRQ TAFPPNF+HSLDGSHMMMTAVAC++AGL+FAGVHDSYWTHACDVD++NR
Sbjct: 599 ETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNR 658
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
ILREKFVELYE PILE LLE FQ S+P L+FPPLPERGDFDLR+V+ S YFFN
Sbjct: 659 ILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 711
>I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 949
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/857 (55%), Positives = 621/857 (72%), Gaps = 25/857 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA EY+EL ++ +++L P LPY+KSLFLGWFEPL+ AI +QEV
Sbjct: 118 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 177
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LPADK+AVI MHK+MGLLM++ +G+ RV+ AA IGEA+E E
Sbjct: 178 QRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVERE 237
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
++ F+ + K S S
Sbjct: 238 FKVQT----------------------FFQ---KTRKKSAGENDLALEKEQAKCRKRVKS 272
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L++++K+ + I++ + + WG E++ K+G R+++LL+++A++QSP Q S PDIR
Sbjct: 273 LVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIR 332
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLV P W YD
Sbjct: 333 PAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDT 392
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G Y FLPSY+MRTHG K Q EA+K P QL +FEALD+LG+TKWR+N+R+ + + IW
Sbjct: 393 GGYFFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIW 452
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD++++ I+KWK +K K N E H++RC+ ELKL+VA
Sbjct: 453 SRGGGIAGLVDKENIPLPERPETEDPDKIQKWKWSLKKAKKANRELHAERCDTELKLSVA 512
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMH +L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHL
Sbjct: 513 RKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHL 572
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GG++KL +E +VAF EN L D+FDSA P++G WW+ AEDP QCLAAC++LS+A
Sbjct: 573 ANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDA 632
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L+S +P+ +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV GD+PAD+YS IA+RVL
Sbjct: 633 LKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVL 692
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
+++R+D+ +DP TN QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+
Sbjct: 693 DVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKG 752
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N PV+WT+P+GLP
Sbjct: 753 LITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHPVKWTSPVGLP 812
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPY++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACKK
Sbjct: 813 VVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHMMMTAIACKK 872
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLL+ FQ SFP L FPP P
Sbjct: 873 AGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPS 932
Query: 974 RGDFDLREVLNSQYFFN 990
+GDFD+REVL S YFFN
Sbjct: 933 QGDFDVREVLASTYFFN 949
>Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=2
Length = 949
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/857 (54%), Positives = 617/857 (71%), Gaps = 21/857 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA+EY++L ++ ++ L P LPY+KSLFLGWFEPL+ A+ +Q+V
Sbjct: 114 LRQRQVKAETEAWARAAEEYRQLEGEMLDRHLAPQLPYVKSLFLGWFEPLRDAVARDQDV 173
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LPA+K+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E
Sbjct: 174 QRRKRVKHVYAKYLLLLPAEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVERE 233
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
++ +P + A S
Sbjct: 234 YKVQAFFQKTRRKTRSKTESENDPGLDKEQAKCRK---------------------LVKS 272
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L++++K + +++ + + WG EA+ K+G R+++LL+++A++QSP Q S PD R
Sbjct: 273 LVRRRKSTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQTPDSSPDFR 332
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YDK
Sbjct: 333 PAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDK 392
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G +LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+N+R+ DV+ IW
Sbjct: 393 GGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIW 452
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD+ ++ I+KWK VK K N E H++RC+ ELKL+VA
Sbjct: 453 SRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHAERCDTELKLSVA 512
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHL
Sbjct: 513 RKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHL 572
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GG++KL +ES++ F E+HL D+FDSA P++G WW+ AEDP QCLAAC++LS A
Sbjct: 573 ANKYGGGIEKLSHESKLTFVEDHLPDIFDSAANPVDGNCWWINAEDPFQCLAACMDLSNA 632
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L S +P +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+RVL
Sbjct: 633 LESSSPHGAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVL 692
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
+++R+D+ KDP T+ +VDRKLVKQTVMTSVYGVT++GAR QI +RL+E+
Sbjct: 693 DVVREDSMKDPATDPSVPLAKVLVDEVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKG 752
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I DD L+ SCYA + TL AL +MF++AR+IM+WL DCAK+IAS N+PVRWT+P+GLP
Sbjct: 753 HITDDKLLYDVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKNQPVRWTSPVGLP 812
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPY++ +I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+
Sbjct: 813 VVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDSSHMMMTAITCKE 872
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLLE FQ FP + FPP P
Sbjct: 873 AGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPA 932
Query: 974 RGDFDLREVLNSQYFFN 990
+G+FD+REVL S YFFN
Sbjct: 933 QGNFDVREVLTSTYFFN 949
>K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria italica
GN=Si005787m.g PE=3 SV=1
Length = 966
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/858 (55%), Positives = 626/858 (72%), Gaps = 26/858 (3%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA+EY+E+ ++ +++L P LPY+KSLF+GWFEPL+ AI +Q+V
Sbjct: 134 LRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARDQDV 193
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LPADK+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E
Sbjct: 194 QRRKRVKHVYAKYLLLLPADKIAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVERE 253
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHA-AIENGKLSDXXXXXXXXXXXXXXXXXXS 312
++ ++ GE A +E K
Sbjct: 254 FKVQSFFQKSRK---------KKDQGENDQALEMEQAKCR----------------KRVK 288
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
+L++++KM + +++ + + WG EA+ K+G R+++LL+++A++Q P Q S PDI
Sbjct: 289 TLVRRRKMTEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDI 348
Query: 373 RPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYD 432
RPAF+H + + ++ + +++ +IECD LV +G E +A+++ IPYLPMLVPP W YD
Sbjct: 349 RPAFRHVLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYD 408
Query: 433 KGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQI 492
KG +LFLPSY+MRTHG K Q +A+K P QL+ +FEALD LG+TKWR+N+R+ DV+ I
Sbjct: 409 KGGHLFLPSYIMRTHGVKDQKDAIKSVPRKQLQKVFEALDILGSTKWRVNRRVHDVVETI 468
Query: 493 WTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
W+ GG +A LVD+ ++ ++KWK +K K N E H++RC+ ELKL+V
Sbjct: 469 WSRGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSV 528
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
ARKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGL WLKIH
Sbjct: 529 ARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIH 588
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
LAN Y GGV+KL +E ++AF EN L D+FDSA P++G RWW AEDP QCLAAC++LS+
Sbjct: 589 LANKYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNRWWTNAEDPFQCLAACMDLSD 648
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
AL+S +P +SH+P+H DGSCNGLQHYAALGRD +GA VNLV G++PAD+YS IA+RV
Sbjct: 649 ALKSSSPYRAVSHLPIHQDGSCNGLQHYAALGRDYMGAVVVNLVPGEKPADIYSEIAARV 708
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
L+++R+D+ KDP TN QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+
Sbjct: 709 LDVVREDSMKDPATNPNASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEK 768
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N+PV+WT+P+GL
Sbjct: 769 GLITDDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGL 828
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACK 912
P VQPY++ +I+TSLQ L+LRRE D + V+RQ AFPPNFVHSLD SHMMMTA+ACK
Sbjct: 829 PVVQPYKKYKNYMIRTSLQCLALRREGDAIAVQRQKAAFPPNFVHSLDSSHMMMTAIACK 888
Query: 913 KAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLP 972
+AGLDFAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLLE FQ SFP L FPP P
Sbjct: 889 EAGLDFAGVHDSFWVHACDVDQMNQILREQFVELYSMPILENLLEEFQTSFPTLEFPPCP 948
Query: 973 ERGDFDLREVLNSQYFFN 990
+G+FD+REVLNS YFFN
Sbjct: 949 PQGNFDVREVLNSTYFFN 966
>J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) OS=Oryza
brachyantha GN=OB06G30770 PE=3 SV=1
Length = 845
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/853 (55%), Positives = 616/853 (72%), Gaps = 22/853 (2%)
Query: 139 VKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSH 198
VK ETEAW AA EY+EL ++ ++KL P LPY+KSLFLGWFEPL+ AI +QEV ++
Sbjct: 14 VKAETEAWARAADEYRELEREMLDRKLAPALPYVKSLFLGWFEPLRDAIARDQEVQRRKR 73
Query: 199 RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXX 258
K +A Y LPADK+AVI MHK+MGLLM++ +G RV+ AA IGEA+E E ++
Sbjct: 74 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGGVSVRVVQAAHCIGEAVEREFKVQT 133
Query: 259 XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQ 318
F ++ ++ SL++++
Sbjct: 134 F---------------------FQKTRKKSASKTEGENDEALEKEQAKCRERVKSLVRRR 172
Query: 319 KMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKH 378
K+ + I++ + + WG EA+ K+G R+++LL+++A++QSP Q S PDIRPAFKH
Sbjct: 173 KLTEAQKIVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQKPESSPDIRPAFKH 232
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLF 438
+ + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YD G YLF
Sbjct: 233 VLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVPPKKWKGYDSGGYLF 292
Query: 439 LPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR 498
LPSY+MRTHG K Q EA+K P QL +FEALD+LG+TKWR+N+R+ D + IW+ GG
Sbjct: 293 LPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHDAVEAIWSRGGG 352
Query: 499 LADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKE 558
+A LVD+ ++ I+KWK +K K N E H++RC+ ELKL+VARKM+E
Sbjct: 353 IAGLVDKGNIPLPERPESEDPDEIQKWKWGLKKAKKTNRELHAERCDTELKLSVARKMRE 412
Query: 559 EKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA 618
E GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y
Sbjct: 413 EDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYG 472
Query: 619 GGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT 678
GG++KL +E +VAF EN L D+FDSA P++G WW+ AEDP QCLAAC++LS+AL+S +
Sbjct: 473 GGIEKLSHEGKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSS 532
Query: 679 PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRK 738
P +SH+P+H DGSCNGLQHYAALGRD +GA AVNLV G++PAD+YS IA+RVL+++R+
Sbjct: 533 PHCAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIATRVLDVVRQ 592
Query: 739 DAEKDPETN-SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIED 797
D+ KDP TN + QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+ I D
Sbjct: 593 DSMKDPATNPTASLARHIGSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGHITD 652
Query: 798 DSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQP 857
D L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N+PV+WT+P+GLP VQP
Sbjct: 653 DKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENQPVKWTSPVGLPVVQP 712
Query: 858 YRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLD 917
Y++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACKKAGL
Sbjct: 713 YKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLDSSHMMMTAIACKKAGLH 772
Query: 918 FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDF 977
FAGVHDS+W HACDVD+MN ILRE+FVELY PIL+NLL+ FQ SFP L FPP P +GDF
Sbjct: 773 FAGVHDSFWVHACDVDKMNHILREQFVELYSMPILQNLLKEFQTSFPTLEFPPCPSQGDF 832
Query: 978 DLREVLNSQYFFN 990
D+REVL S YFFN
Sbjct: 833 DVREVLASTYFFN 845
>Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=2 SV=1
Length = 948
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/857 (54%), Positives = 618/857 (72%), Gaps = 21/857 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA+EY++L ++ ++ L P LPY+KSLFLGWFEPL+ A+ +Q+V
Sbjct: 113 LRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARDQDV 172
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LP +K+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E
Sbjct: 173 QRRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVERE 232
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
++ +P + A S
Sbjct: 233 YKVQAFFQKTRRKTRSKNESENDPALDKEQAKCRK---------------------LVKS 271
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L++++K+ + +++ + + WG EA+ K+G R+++LL+++A++QSP +Q + PD R
Sbjct: 272 LVRRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFR 331
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YDK
Sbjct: 332 PAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDK 391
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G +LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+N+R+ DV+ IW
Sbjct: 392 GGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIW 451
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD++++ I+KW+ VK K N E H++RC+ ELKL+VA
Sbjct: 452 SRGGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVA 511
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGLRWLKIHL
Sbjct: 512 RKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHL 571
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GG++KL +ES++AF E+ L +FDSA P++G WW+ AEDP QCLAACI+LS+A
Sbjct: 572 ANKYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDPFQCLAACIDLSDA 631
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L+S +P +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+RVL
Sbjct: 632 LKSSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVL 691
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
++R+D+ KDP T+ QVDRKLVKQTVMTSVYGVT++GAR QI +RL+E+
Sbjct: 692 NVVREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKG 751
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I D+ L+ SCYAA+ TL AL +MF++AR IM+WL DCAK+IAS N+PVRWT+P+GLP
Sbjct: 752 HITDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVRWTSPVGLP 811
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPY++ +I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+
Sbjct: 812 VVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDSSHMMMTAITCKE 871
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLLE FQ FP + FPP P
Sbjct: 872 AGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPA 931
Query: 974 RGDFDLREVLNSQYFFN 990
+G+FD+REVL S YFFN
Sbjct: 932 QGNFDVREVLTSTYFFN 948
>Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=3 SV=1
Length = 948
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/857 (54%), Positives = 617/857 (71%), Gaps = 21/857 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA+EY++L ++ ++ L P LPY+KSLFLGWFEPL+ A+ +Q+V
Sbjct: 113 LRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARDQDV 172
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LP +K+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E
Sbjct: 173 QRRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVERE 232
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
++ +P + A S
Sbjct: 233 YKVQAFFQKTRRKTRSKNESENDPALDKEQAKCRK---------------------LVKS 271
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L++++K+ + +++ + + WG EA+ K+G R+++LL+++A++QSP +Q + PD R
Sbjct: 272 LVRRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFR 331
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YDK
Sbjct: 332 PAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDK 391
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G +LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+N+R+ DV+ IW
Sbjct: 392 GGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIW 451
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD++++ I+KW+ VK K N E H++RC+ ELKL+VA
Sbjct: 452 SRGGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVA 511
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+ EGRPLGKSGLRWLKIHL
Sbjct: 512 RKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHL 571
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GG++KL +ES++AF E+ L +FDSA P++G WW+ AED QCLAACI+LS+A
Sbjct: 572 ANKYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDSFQCLAACIDLSDA 631
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L+S +P +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+RVL
Sbjct: 632 LKSSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVL 691
Query: 734 EIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERC 793
++R+D+ KDP T+ QVDRKLVKQTVMTSVYGVT++GAR QI +RL+E+
Sbjct: 692 NVVREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKG 751
Query: 794 AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLP 853
I D+ L+ SCYAA+ TL AL +MF++AR IM+WL DCAK+IAS N+PVRWT+P+GLP
Sbjct: 752 HITDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVRWTSPVGLP 811
Query: 854 AVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
VQPY++ +I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+
Sbjct: 812 VVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDSSHMMMTAITCKE 871
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY PILENLLE FQ FP + FPP P
Sbjct: 872 AGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPA 931
Query: 974 RGDFDLREVLNSQYFFN 990
+G+FD+REVL S YFFN
Sbjct: 932 QGNFDVREVLTSTYFFN 948
>M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra032120 PE=4 SV=1
Length = 940
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/866 (56%), Positives = 620/866 (71%), Gaps = 64/866 (7%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE EY+EL +++CE+ L PNLPY+K +FLGWF+PL+ I
Sbjct: 136 KRKFDSLRRRQVKEETEAWERMVDEYRELEKEMCEKSLAPNLPYVKHMFLGWFQPLRDVI 195
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ + K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 196 EREQRLQKSKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 254
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE+E I H ++ + ++
Sbjct: 255 IGIAIEHEVGI--------------------------HNFLKRTRKNNAGDSQEEVKDKQ 288
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LL+ETAY+Q P++Q
Sbjct: 289 LLRKRVNSLIRRKRIIDALKVVKS-EGIKPWGRATQAKLGSRLLELLMETAYVQPPLTQS 347
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P++RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 348 GDSIPEVRPAFRHKFKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 407
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A+K +FEALD+LGNTKWR+N++
Sbjct: 408 PKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRK 467
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV I+ WK V+ K N ERHS RC
Sbjct: 468 ILDVVEKLWADGGNIAGLVNREDVPIPEKPLSEDPEEIQTWKWSVRKAKKINRERHSLRC 527
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 528 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 587
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLYAGGV+KL ++ R+AF ENHLDD+ DSA+ + G+RWWL+AEDP QCL
Sbjct: 588 GLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAVHGKRWWLKAEDPFQCL 647
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++AL+SP+P + IS++P+H + AAAVNLV GD+PADV
Sbjct: 648 AACVILAQALKSPSPHSVISNLPIH-----------------QFEAAAVNLVAGDKPADV 690
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 691 YSEISLRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQ 750
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I D+ LF+A+CY+AK TL AL E+FEAAR+IMSWL DCAK+IAS N PV
Sbjct: 751 IKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPV 810
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHM 904
RWTTP+GLP VQPY R E V V++Q TAFPPNFVHSLDG+HM
Sbjct: 811 RWTTPLGLPVVQPY----------------CRSERHLVDVRKQRTAFPPNFVHSLDGTHM 854
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC++AGL+FAGVHDSYWTHACDVD MNRILREKFVELY +PILE+LL+SFQ+S+P
Sbjct: 855 MMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYSSPILEDLLQSFQESYP 914
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
L FPP+P+RGDFDL+EVL SQYFFN
Sbjct: 915 TLVFPPVPKRGDFDLKEVLKSQYFFN 940
>C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb10g025820 PE=3 SV=1
Length = 960
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/858 (54%), Positives = 619/858 (72%), Gaps = 25/858 (2%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQVK ETEAW AA+EY+E+ ++ +++L P LPY+KSLF+GWFEPL+ AI +Q+V
Sbjct: 127 LRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARDQDV 186
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
++ K +A Y LPADK+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E
Sbjct: 187 QRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVERE 246
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
++ F+ + K +
Sbjct: 247 FKVQ----------------------SFFQKS--RKKKDQGENDPALEKEQAKCRKRVKT 282
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR 373
L+K++KM + +++ + + WG EA+ K+G R+++LL+++A++Q P Q+ S PDIR
Sbjct: 283 LVKRRKMSEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQIPDSSPDIR 342
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDK 433
PAFKH + + ++ + +++ +IECD LV G E +A+++ IPYLPMLVPP W Y+K
Sbjct: 343 PAFKHVLRQPIIENGRLKKKHWVIECDHLVHDGFESTARHVDIPYLPMLVPPKKWKGYNK 402
Query: 434 GAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIW 493
G +LFLPSY+MRTHG K Q +A+ P QL +FEALD LG+TKWR+N+R+ DV+ IW
Sbjct: 403 GGHLFLPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIW 462
Query: 494 TSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVA 553
+ GG +A LVD+ ++ ++KWK +K K N E H++RC+ ELKL+VA
Sbjct: 463 SRGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVA 522
Query: 554 RKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 613
RKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHL
Sbjct: 523 RKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHL 582
Query: 614 ANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEA 673
AN Y GGV+KL +E ++AF EN L D+FDSA P++G WW AEDP QCLAAC++LS+A
Sbjct: 583 ANKYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDA 642
Query: 674 LRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVL 733
L SP+P T+SH+P+H DGSCNGLQHYAALGRD +GA AVNLV G++PAD+YS IA+RVL
Sbjct: 643 LNSPSPYRTVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIAARVL 702
Query: 734 EIMRKDAEKDPETN-SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
++R+D+ KDP TN + QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+
Sbjct: 703 NVVREDSMKDPATNPTASLDMGIGSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEK 762
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
I DD L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N+PV+WT+P+GL
Sbjct: 763 GLIADDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGL 822
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACK 912
P VQPY++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACK
Sbjct: 823 PVVQPYKKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLDSSHMMMTAIACK 882
Query: 913 KAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLP 972
+AGL FAGVHDS+W HACDVD+MN+ILR++FVELY PIL+NLLE FQ +FP L FPP P
Sbjct: 883 EAGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILDNLLEEFQMAFPTLEFPPCP 942
Query: 973 ERGDFDLREVLNSQYFFN 990
+G+FD+REVL S YFFN
Sbjct: 943 PQGNFDVREVLTSTYFFN 960
>Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays GN=rpoT2 PE=2
SV=1
Length = 952
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/852 (54%), Positives = 612/852 (71%), Gaps = 24/852 (2%)
Query: 139 VKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSH 198
VK ETEAW AA+EY+E+ ++ +++L P LPY+K+LF+GWFEPL+ AI +Q+V ++
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQRRKR 184
Query: 199 RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXX 258
K +A Y LPADK+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E ++
Sbjct: 185 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKVQS 244
Query: 259 XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQ 318
+P E A SL+K++
Sbjct: 245 FFQKSRKKKIQGE---NDPALEKEQAKCRK---------------------RVKSLVKRR 280
Query: 319 KMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKH 378
KM + +++ + + WG EA+ K+G R+++LL+++A++Q P Q S PDIRPAFKH
Sbjct: 281 KMSEAQRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKH 340
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLF 438
+ + ++ + +++ +IECD LV +G E +A+++ IPYLPMLVPP W YDKG +LF
Sbjct: 341 VLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLF 400
Query: 439 LPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR 498
LPSY+MRTHG K Q +A+ P QL +FEALD LG+TKWR+N+R+ DV+ IW+ GG
Sbjct: 401 LPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGG 460
Query: 499 LADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKE 558
+A LVD+ ++ ++KWK +K K N E H++RC+ ELKL+VARKM+E
Sbjct: 461 IAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMRE 520
Query: 559 EKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA 618
E GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y
Sbjct: 521 EDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYG 580
Query: 619 GGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT 678
GG++KL +E ++AF EN L D+FDSA P++G WW AEDP QCLAAC++LS+ALRSP+
Sbjct: 581 GGIEKLSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPS 640
Query: 679 PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRK 738
P +SH+P+H DGSCNGLQHYAALGRD +GA AVNLV G++PAD+YS IASRVL ++ +
Sbjct: 641 PYHAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCE 700
Query: 739 DAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDD 798
D+ KDP TN QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+ I DD
Sbjct: 701 DSMKDPATNPTASLARALVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDD 760
Query: 799 SELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPY 858
L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N+PV+WT+P+GLP VQPY
Sbjct: 761 KLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPY 820
Query: 859 RQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDF 918
++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACK++GL F
Sbjct: 821 KKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLDSSHMMMTAIACKESGLHF 880
Query: 919 AGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFD 978
AGVHDS+W HACDVD+MN+ILR++FVELY PILENLLE FQ SFP L FPP P +G+FD
Sbjct: 881 AGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQTSFPTLEFPPCPPQGNFD 940
Query: 979 LREVLNSQYFFN 990
+REVL S YFFN
Sbjct: 941 VREVLTSTYFFN 952
>O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays GN=RpoT PE=3
SV=1
Length = 952
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/852 (54%), Positives = 612/852 (71%), Gaps = 24/852 (2%)
Query: 139 VKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSH 198
VK ETEAW AA+EY+E+ ++ +++L P LPY+K+LF+GWFEPL+ AI +Q+V ++
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQRRKR 184
Query: 199 RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXX 258
K +A Y LPADK+AVI MHK+MGLLM++ +G G RV+ AA IGEA+E E ++
Sbjct: 185 VKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKVQS 244
Query: 259 XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQ 318
+P E A SL+K++
Sbjct: 245 FFQKSRKKKIQGE---NDPALEKEQAKCRK---------------------RVKSLVKRR 280
Query: 319 KMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKH 378
KM + +++ + + WG EA+ K+G R+++LL+++A++Q P Q S PDIRPAFKH
Sbjct: 281 KMSEAQRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKH 340
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLF 438
+ + ++ + +++ +IECD LV +G E +A+++ IPYLPMLVPP W YDKG +LF
Sbjct: 341 VLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLF 400
Query: 439 LPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR 498
LPSY+MRTHG K Q +A+ P QL +FEALD LG+TKWR+N+R+ DV+ IW+ GG
Sbjct: 401 LPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGG 460
Query: 499 LADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKE 558
+A LVD+ ++ ++KWK +K K N E H++RC+ ELKL+VARKM+E
Sbjct: 461 IAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMRE 520
Query: 559 EKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA 618
E GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y
Sbjct: 521 EDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYG 580
Query: 619 GGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT 678
GG++KL +E ++AF EN L D+FDSA P++G WW AEDP QCLAAC++LS+ALRSP+
Sbjct: 581 GGIEKLSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPS 640
Query: 679 PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRK 738
P +SH+P+H DGSCNGLQHYAALGRD +GA AVNLV G++PAD+YS IASRVL ++ +
Sbjct: 641 PYHAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCE 700
Query: 739 DAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDD 798
D+ KDP TN QVDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+ I DD
Sbjct: 701 DSMKDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDD 760
Query: 799 SELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPY 858
L+ SCYA + TL AL +MF++AR IM+WL DCAK+IAS N+PV+WT+P+GLP VQPY
Sbjct: 761 KLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPY 820
Query: 859 RQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDF 918
++ +I+TSLQ L+LRRE D + ++RQ AFPPNFVHSLD SHMMMTA+ACK++GL F
Sbjct: 821 KKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLDSSHMMMTAIACKESGLHF 880
Query: 919 AGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFD 978
AGVHDS+W HACDVD+MN+ILR++FVELY PILENLLE FQ SFP L FPP P +G+FD
Sbjct: 881 AGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQTSFPTLEFPPCPPQGNFD 940
Query: 979 LREVLNSQYFFN 990
+REVL S YFFN
Sbjct: 941 VREVLTSTYFFN 952
>Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=P0453H04.42 PE=2 SV=1
Length = 806
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/831 (55%), Positives = 602/831 (72%), Gaps = 25/831 (3%)
Query: 160 ICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVIT 219
+ +++L P LPY+KSLFLGWFEPL+ AI +QEV ++ K +A Y LPADK+AVI
Sbjct: 1 MLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIV 60
Query: 220 MHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDG 279
MHK+MGLLM++ +G+ RV+ AA IGEA+E E ++
Sbjct: 61 MHKMMGLLMSSKDGVASVRVVQAAHCIGEAVEREFKVQT--------------------- 99
Query: 280 EFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQE 339
F+ + K S SL++++K+ + I++ + + WG E
Sbjct: 100 -FFQ---KTRKKSAGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTE 155
Query: 340 ARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIEC 399
++ K+G R+++LL+++A++QSP Q S PDIRPAFKH + + ++ + +++ +IEC
Sbjct: 156 SQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIEC 215
Query: 400 DPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRA 459
DPLV +G E +A+++ IPYLPMLV P W YD G YLFLPSY+MRTHG K Q EA+K
Sbjct: 216 DPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSV 275
Query: 460 PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXX 519
P QL +FEALD+LG+TKWR+N+R+ + + IW+ GG +A LVD++++
Sbjct: 276 PRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDP 335
Query: 520 XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHP 579
I+KWK +K K N E H++RC+ ELKL+VARKM+EE GFYYPHN+DFRGRAYPMH
Sbjct: 336 DEIQKWKWSLKKAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHA 395
Query: 580 YLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDD 639
+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GG++KL +E +VAF EN L D
Sbjct: 396 HLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPD 455
Query: 640 VFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQH 699
+FDSA P++G WW+ AEDP QCLAAC++LS+AL+S +P+ +SH+P+H DGSCNGLQH
Sbjct: 456 IFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQH 515
Query: 700 YAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQ 759
YAALGRD +GAAAVNLV GD+PAD+YS IA+RVL+++R+D+ +DP TN Q
Sbjct: 516 YAALGRDYMGAAAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQ 575
Query: 760 VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEM 819
VDRKLVKQTVMTSVYGVTY+GAR QI +RL+E+ I DD L+ SCYA + TL AL +M
Sbjct: 576 VDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQM 635
Query: 820 FEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRET 879
F++AR IM+WL DCAK+IAS N PV+WT+P+GLP VQPY++ +I+TSLQ L+LRRE
Sbjct: 636 FQSARGIMAWLGDCAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREG 695
Query: 880 DKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRIL 939
D + ++RQ AFPPNFVHSLD SHMMMTA+ACKKAGL FAGVHDS+W HACDVD+MN+IL
Sbjct: 696 DAIALQRQKAAFPPNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQIL 755
Query: 940 REKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
RE+FVELY PILENLL+ FQ SFP L FPP P +GDFD+REVL S YFFN
Sbjct: 756 REQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 806
>M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Aegilops tauschii
GN=F775_25821 PE=4 SV=1
Length = 884
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/901 (56%), Positives = 611/901 (67%), Gaps = 154/901 (17%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQ+++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+AEQE+
Sbjct: 94 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQEL 153
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
+ + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA+E+E
Sbjct: 154 VSQRGTRASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAVEHE 212
Query: 254 ARIXX-XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXS 312
RI E D + A E +L +
Sbjct: 213 VRIHKFLEKTKKKNTKEVDKVVEAVDADI---AKEQERLR----------------KKVT 253
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
L+K+QK++QV ++K D +PWGQ+A AKVG R+++L IETA+IQ P SQ G S P+I
Sbjct: 254 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEI 313
Query: 373 RPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYD 432
RPAF H +T V + +KS + VI
Sbjct: 314 RPAFTHEMRT--------------------VAREQQKSRRYGVI---------------- 337
Query: 433 KGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQI 492
+C+ + R ++ ALD+LG+TKWR+N+++L ++ +I
Sbjct: 338 -------------------KCDPLVRQGLDRT-----ALDNLGSTKWRVNKKVLSIVDRI 373
Query: 493 WTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
W+SGGRLADLVDR DV ++KW+ +++ KEN+ERHSQRC++ELKLAV
Sbjct: 374 WSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAV 433
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
ARKMKEE GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIH
Sbjct: 434 ARKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIH 493
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
LANLY GGVDKL Y+ R+AFTENHL+D+FDSA+RPLEG+RWWLEAEDP QCLA C++L+E
Sbjct: 494 LANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNE 553
Query: 673 ALRSPTPETTISHVPVHM-----------------DGSCNGLQHYAALGRDKLGAAAVNL 715
ALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 554 ALRSPSPETVISHIPVHQQQLHECRKDIQVQSKEEDGSCNGLQHYAALGRDKLGAVAVNL 613
Query: 716 VRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXX------------------- 756
V G++PADVYSGIA+RV+EIM++DA+KDP ++
Sbjct: 614 VSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQFVSAILHDLISVIAFS 673
Query: 757 -------XXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAA 809
QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKER I +DSELF ASCYAA
Sbjct: 674 WYLIDSPVIQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIAEDSELFGASCYAA 733
Query: 810 KTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTS 869
K TLTAL EMFEAARSIM+WL DCAK IKTS
Sbjct: 734 KVTLTALGEMFEAARSIMTWLGDCAK------------------------------IKTS 763
Query: 870 LQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
LQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACKK GL FAGVHDSYWTHA
Sbjct: 764 LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHA 823
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
CDVD MN+ILREKFVELY+APILENLLESF+ +FPKL FPPLPERG+FD+++VL S YFF
Sbjct: 824 CDVDTMNKILREKFVELYDAPILENLLESFRTAFPKLKFPPLPERGNFDMKDVLQSTYFF 883
Query: 990 N 990
N
Sbjct: 884 N 884
>Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=3 SV=1
Length = 1087
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/927 (52%), Positives = 642/927 (69%), Gaps = 15/927 (1%)
Query: 74 GLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQM---VKKEVKGKPLLDRKAKYK 130
G +L R YAS AEA++ D E+ + + K K + RKA++K
Sbjct: 166 GERPALDYCRTYASAAEAVIDDDDESEEECAPEEPPQSVDFNKAKTAKERAAESRKARWK 225
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
+ LR RQ K+ETEAW +AA EY+EL+ ++C++ L PNLP +SL LGWFEPL+ AI E
Sbjct: 226 EKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQE 285
Query: 191 Q----EVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQI 246
Q E + HR + + P+ LPAD +AVITMH+LM LLM++ GC +V+HAALQI
Sbjct: 286 QKDYEERNFREHRAI-YGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQI 343
Query: 247 GEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXX 306
GEA+E E I G+ N S
Sbjct: 344 GEAVEQEVGIYKLLRSKRKVAKKVKNKVS---GDALDDLDTNTDDSIANSVLDSDLKLKL 400
Query: 307 XXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
L+KQQK++ V +++ + +PWG + KVG R+++L++ET+ ++SP Q
Sbjct: 401 AKEKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNA 460
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRR-YGIIECDPLVTKGLEKSAKNMVIPYLPMLVPP 425
++RPAFKHT + ++ ++ R YG+IECDP V L+KS ++MV+PY+PMLV P
Sbjct: 461 QDMTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKP 520
Query: 426 NNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRL 485
WT + G YL L S +MRTHGAK+ + + + I +ALD+LG+T+W+IN +
Sbjct: 521 RAWTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVV 580
Query: 486 LDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
LDV+ Q+W GGRLADLVD +DV IR W+R + + N+ERHS RC+
Sbjct: 581 LDVLEQVWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCD 640
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
ELKLA ARK+++E+GF+YPHN+DFRGRAYP+HP+LNHLGSD+CRGIL+FAEGR LG +G
Sbjct: 641 TELKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTG 700
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
LRWLKIHLANLY G V K+ +++RVA+ + ++ VFDSADRPL+G RWWL+AEDP Q LA
Sbjct: 701 LRWLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLA 760
Query: 666 ACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVY 725
C+++ A++S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNLV GD+PADVY
Sbjct: 761 TCLDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVY 820
Query: 726 SGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQI 785
SGIA+RV EIM +DA+KDP+T+ ++DRKLVKQTVMTSVYGVT+VGAR QI
Sbjct: 821 SGIAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQI 880
Query: 786 KRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR 845
RLKER I++ +E++ A+CYAAKTTL AL EMF+ AR IMSWL DCAK+IAS E V+
Sbjct: 881 FNRLKERGTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVK 940
Query: 846 WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR-ETDK-VLVKRQSTAFPPNFVHSLDGSH 903
WTTP+GLP VQPYR+ GR ++KTSLQVL+LR + D+ VLV+RQ +AFPPNFVHSLD +H
Sbjct: 941 WTTPLGLPVVQPYRKPGRHLVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDSTH 1000
Query: 904 MMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
MMMTA+AC++AGL FAGVHDSYWTHA DV++MN +LREKFVELY P+LENLL+SFQ+ F
Sbjct: 1001 MMMTALACQEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQERF 1060
Query: 964 PKLNFPPLPERGDFDLREVLNSQYFFN 990
P L FP +P RGD DL+EVL + YFFN
Sbjct: 1061 PTLVFPEVPARGDLDLKEVLRAPYFFN 1087
>Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=2 SV=1
Length = 1087
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/927 (52%), Positives = 642/927 (69%), Gaps = 15/927 (1%)
Query: 74 GLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQM---VKKEVKGKPLLDRKAKYK 130
G +L R YAS AEA++ D E+ + + K K + RKA++K
Sbjct: 166 GERPALDYCRTYASAAEAVIDDDDESEEECAPEEPPQSVDFNKAKTAKERAAESRKARWK 225
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
+ LR RQ K+ETEAW +AA EY+EL+ ++C++ L PNLP +SL LGWFEPL+ AI E
Sbjct: 226 EKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQE 285
Query: 191 Q----EVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQI 246
Q E + HR + + P+ LPAD +AVITMH+LM LLM++ GC +V+HAALQI
Sbjct: 286 QKDYEERNFREHRAI-YGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQI 343
Query: 247 GEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXX 306
GEA+E E I G+ N S
Sbjct: 344 GEAVEQEVGIYKLLRSKRKVAKKVKNKVS---GDALDDLDTNTDDSIANSVLDSDLKLKL 400
Query: 307 XXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
L+KQQK++ V +++ + +PWG + KVG R+++L++ET+ ++SP Q
Sbjct: 401 AKEKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNA 460
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRR-YGIIECDPLVTKGLEKSAKNMVIPYLPMLVPP 425
++RPAFKHT + ++ ++ R YG+IECDP V L+KS ++MV+PY+PMLV P
Sbjct: 461 QDMTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKP 520
Query: 426 NNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRL 485
WT + G YL L S +MRTHGAK+ + + + I +ALD+LG+T+W+IN +
Sbjct: 521 RAWTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVV 580
Query: 486 LDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
LDV+ Q+W GGRLADLVD +DV IR W+R + + N+ERHS RC+
Sbjct: 581 LDVLEQMWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCD 640
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
ELKLA ARK+++E+GF+YPHN+DFRGRAYP+HP+LNHLGSD+CRGIL+FAEGR LG +G
Sbjct: 641 TELKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTG 700
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
LRWLKIHLANLY G V K+ +++RVA+ + ++ VFDSADRPL+G RWWL+AEDP Q LA
Sbjct: 701 LRWLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLA 760
Query: 666 ACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVY 725
C+++ A++S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNLV GD+PADVY
Sbjct: 761 TCLDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVY 820
Query: 726 SGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQI 785
SGIA+RV EIM +DA+KDP+T+ ++DRKLVKQTVMTSVYGVT+VGAR QI
Sbjct: 821 SGIAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQI 880
Query: 786 KRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR 845
RLKER I++ +E++ A+CYAAKTTL AL EMF+ AR IMSWL DCAK+IAS E V+
Sbjct: 881 FNRLKERGTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVK 940
Query: 846 WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR-ETDK-VLVKRQSTAFPPNFVHSLDGSH 903
WTTP+GLP VQPYR+ GR ++KTSLQVL+LR + D+ VLV+RQ +AFPPNFVHSLD +H
Sbjct: 941 WTTPLGLPVVQPYRKPGRHLVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDSTH 1000
Query: 904 MMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
MMMTA+AC++AGL FAGVHDSYWTHA DV++MN +LREKFVELY P+LENLL+SFQ+ F
Sbjct: 1001 MMMTALACQEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQERF 1060
Query: 964 PKLNFPPLPERGDFDLREVLNSQYFFN 990
P L FP +P RGD DL+EVL + YFFN
Sbjct: 1061 PTLVFPEVPARGDLDLKEVLRAPYFFN 1087
>I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 915
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/820 (55%), Positives = 598/820 (72%), Gaps = 24/820 (2%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
+RQVK ETEAW AA+EY++L ++ ++ L P+LPY+KSLFLGWFEPL+ AI +QEV +
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQR 172
Query: 196 KSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEAR 255
+ K +A Y LPA+K++VI MHK+MGLLM+N +G G RV+ AA IGEA+E E +
Sbjct: 173 RKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVEREFK 232
Query: 256 IXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLI 315
+ F+ + GK + SL+
Sbjct: 233 VQA----------------------FFQKTRKKGK--NGENDPALGKEQAKCRKLVKSLV 268
Query: 316 KQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPA 375
K++K+ + +++ + + WG EA+ K+G R+++LL+++A++QSP Q+ S PD RPA
Sbjct: 269 KRRKLTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPA 328
Query: 376 FKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGA 435
FKH + + ++ + +++ +IECDPLV +G E +A+++ IPYLPMLVPP W YDKG
Sbjct: 329 FKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGG 388
Query: 436 YLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+N+R+ DV+ IW+
Sbjct: 389 HLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSR 448
Query: 496 GGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARK 555
GG +A LVD+ D+ I+KWK +K K N E H++RC+ ELKL+VARK
Sbjct: 449 GGGIAGLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARK 508
Query: 556 MKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 615
M+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN
Sbjct: 509 MREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLAN 568
Query: 616 LYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR 675
Y GG++KL + S++AF ENHL D+FDSA P++G RWW+ AEDP QCLAAC++LS AL+
Sbjct: 569 KYGGGIEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALK 628
Query: 676 SPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
S +P T ISH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+RVL++
Sbjct: 629 SSSPHTAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDV 688
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+R+D+ KDP T++ QVDRKLVKQTVMTSVYGVT++GAR QI +RL+E+ I
Sbjct: 689 VREDSMKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHI 748
Query: 796 EDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAV 855
DD L+ SCYA + TL AL +MF++AR+IM+WL DCAK+IAS N+PV+WT+P+GLP V
Sbjct: 749 TDDKLLYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKNQPVKWTSPVGLPVV 808
Query: 856 QPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAG 915
QPY++ +I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+AG
Sbjct: 809 QPYKKYKNYMIRTSLQCLALRREGDTIATQRQKAAFPPNFVHSLDSSHMMMTAITCKEAG 868
Query: 916 LDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
L FAGVHDS+W HACDVD+MN+ILRE+FVELY PILEN+
Sbjct: 869 LHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENV 908
>A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196123 PE=3 SV=1
Length = 1088
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/928 (52%), Positives = 642/928 (69%), Gaps = 16/928 (1%)
Query: 74 GLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQM---VKKEVKGKPLLDRKAKYK 130
G +L R YAS AEA++ D E+ + + K K + RKA++K
Sbjct: 166 GERPALDYCRTYASAAEAVIDDDDESEEECAPEEPPQSVDFNKAKTAKERAAESRKARWK 225
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
+ LR RQ K+ETEAW +AA EY+EL+ ++C++ L PNLP +SL LGWFEPL+ AI E
Sbjct: 226 EKALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQE 285
Query: 191 Q----EVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQI 246
Q E + HR + + P+ LPAD +AVITMH+LM LLM++ GC +V+HAALQI
Sbjct: 286 QKDYEERNFREHRAI-YGPFLAKLPADMLAVITMHRLMSLLMSDQEH-GCVKVVHAALQI 343
Query: 247 GEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXX 306
GEA+E E I G+ N S
Sbjct: 344 GEAVEQEVGIYKLLRSKRKVAKKVKNKVS---GDALDDLDTNTDDSIANSVLDSDLKLKL 400
Query: 307 XXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
L+KQQK++ V +++ + +PWG + KVG R+++L++ET+ ++SP Q
Sbjct: 401 AKEKVKKLVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNA 460
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRR-YGIIECDPLVTKGLEKSAKNMVIPYLPMLVPP 425
++RPAFKHT + ++ ++ R YG+IECDP V L+KS ++MV+PY+PMLV P
Sbjct: 461 QDMTELRPAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKP 520
Query: 426 NNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRL 485
WT + G YL L S +MRTHGAK+ + + + I +ALD+LG+T+W+IN +
Sbjct: 521 RAWTGFYDGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVV 580
Query: 486 LDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
LDV+ Q+W GGRLADLVD +DV IR W+R + + N+ERHS RC+
Sbjct: 581 LDVLEQMWKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCD 640
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
ELKLA ARK+++E+GF+YPHN+DFRGRAYP+HP+LNHLGSD+CRGIL+FAEGR LG +G
Sbjct: 641 TELKLAAARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTG 700
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
LRWLKIHLANLY G V K+ +++RVA+ + ++ VFDSADRPL+G RWWL+AEDP Q LA
Sbjct: 701 LRWLKIHLANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLA 760
Query: 666 ACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVY 725
C+++ A++S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNLV GD+PADVY
Sbjct: 761 TCLDIRNAIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVY 820
Query: 726 SGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQI 785
SGIA+RV EIM +DA+KDP+T+ ++DRKLVKQTVMTSVYGVT+VGAR QI
Sbjct: 821 SGIAARVREIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQI 880
Query: 786 KRRLKERCAIEDDSELFSASCYAAK-TTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
RLKER I++ +E++ A+CYAAK TTL AL EMF+ AR IMSWL DCAK+IAS E V
Sbjct: 881 FNRLKERGTIQEQTEMYRAACYAAKVTTLNALGEMFKEARCIMSWLGDCAKIIASNGETV 940
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR-ETDK-VLVKRQSTAFPPNFVHSLDGS 902
+WTTP+GLP VQPYR+ GR ++KTSLQVL+LR + D+ VLV+RQ +AFPPNFVHSLD +
Sbjct: 941 KWTTPLGLPVVQPYRKPGRHLVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDST 1000
Query: 903 HMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKS 962
HMMMTA+AC++AGL FAGVHDSYWTHA DV++MN +LREKFVELY P+LENLL+SFQ+
Sbjct: 1001 HMMMTALACQEAGLTFAGVHDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQER 1060
Query: 963 FPKLNFPPLPERGDFDLREVLNSQYFFN 990
FP L FP +P RGD DL+EVL + YFFN
Sbjct: 1061 FPTLVFPEVPARGDLDLKEVLRAPYFFN 1088
>A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_30516 PE=3 SV=1
Length = 845
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/654 (70%), Positives = 527/654 (80%), Gaps = 42/654 (6%)
Query: 337 GQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGI 396
G+ +VG R+++L+IETAYIQ P SQ PPDIRPAF H +T + Q
Sbjct: 234 GEAIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQ-------- 285
Query: 397 IECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAV 456
YDKGA+LFLPSYVMRTHGA+QQ +AV
Sbjct: 286 ----------------------------------YDKGAHLFLPSYVMRTHGARQQRDAV 311
Query: 457 KRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXX 516
+RAP Q++ +FEAL++LG+TKWR+N+R+L ++ +IW+SGGRLADLVDR DV
Sbjct: 312 RRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDT 371
Query: 517 XXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYP 576
++KW+ ++ KEN+ERHSQRC++ELKLAVARKMK+E GFYYPHN+DFRGRAYP
Sbjct: 372 EDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYP 431
Query: 577 MHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENH 636
MHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL Y+ R+AFTENH
Sbjct: 432 MHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENH 491
Query: 637 LDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNG 696
L+D+FDSADRPLEG+RWWL AEDP QCLA CINL+EALRSP+PET ISH+PVH DGSCNG
Sbjct: 492 LEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNG 551
Query: 697 LQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXX 756
LQHYAALGRDKLGA AVNLV G++PADVY+GIA+RV+EIM+ DA KDP T+
Sbjct: 552 LQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLL 611
Query: 757 XXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTAL 816
QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKER I DDSELFSASCYAAK TLTAL
Sbjct: 612 LDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTAL 671
Query: 817 EEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR 876
EMF+AARSIM+WL DCAKVIA NEPVRWTTP+GLP VQPYR++GR +IKTSLQVL+L+
Sbjct: 672 GEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 731
Query: 877 RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMN 936
RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACK+ GL+FAGVHDSYWTHACDVD MN
Sbjct: 732 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMN 791
Query: 937 RILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+ILREKFVELY+ PILENLLESF+KSFP+L FPPLPERGDFDL +VL S YFFN
Sbjct: 792 KILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 845
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
Query: 129 YKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIV 188
+K MLR+RQ+++ETEAWE+AA+EY+ELL D+C+QKL PNLPY+KSLFLGWFEPL+ I+
Sbjct: 117 HKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQII 176
Query: 189 AEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
AEQE+ + + +HA YFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGE
Sbjct: 177 AEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGE 235
Query: 249 AIENE 253
AIE+E
Sbjct: 236 AIEHE 240
>B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chloroplast, putative
OS=Ricinus communis GN=RCOM_1406230 PE=4 SV=1
Length = 1000
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/834 (55%), Positives = 580/834 (69%), Gaps = 55/834 (6%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K +LR+RQ++ ETEAWE +EY+ L++++CE+KL PNLPY+K LFLGWFEPLK I
Sbjct: 147 KRKYNLLRRRQIREETEAWERMVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEGI 206
Query: 188 VAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIG 247
+EQ + + K AP+ LPADKMAVI MHK++GLLM H GC ++ AA+QIG
Sbjct: 207 KSEQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMVGLLMVGHED-GCVPLVQAAVQIG 265
Query: 248 EAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXX 307
AIE E RI E + +G
Sbjct: 266 MAIEQEVRIHNFL---------------EKTKNYQRKKTISG------AQESLGKEKEIL 304
Query: 308 XXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGG 367
+SLI+++K+ +V ++K ++ KPWG++ +AK+G R+++LL ETA++Q PV+Q
Sbjct: 305 RKRVNSLIRRKKLIEVQKLVKN-EEMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSAD 363
Query: 368 SPPDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPN 426
PPD+RPAF+H F+ + QK +++YG+IEC+PLV KGL+ SAK+M+IPY PMLVPP
Sbjct: 364 VPPDVRPAFRHRFRIVKNNPGQKIVKKYGVIECNPLVLKGLDGSAKHMLIPYFPMLVPPK 423
Query: 427 NWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLL 486
W Y+KG + FLPSY+MRTHG+++Q +A+K P N ++ +FEALD+LGNTKWR+N+R+L
Sbjct: 424 KWKGYNKGGHFFLPSYIMRTHGSRKQQDALKNVPRNHMQKVFEALDTLGNTKWRVNRRVL 483
Query: 487 DVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKR------QVKTIMKENNERH 540
DV+ IW GG +A LVDR D K R + K N ERH
Sbjct: 484 DVVESIWARGGNIAGLVDRKDAGCHQSALLPVLMLFMKTDRTSEVRWSARKAKKTNRERH 543
Query: 541 SQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
VARK+K+E+GFYYPHN+DFRGRAYPMHP+L HL SDLCRGILEFAEGRP
Sbjct: 544 LN--------DVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRP 595
Query: 601 LGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDP 660
LGKSGLRWLKIHLANLY+GGV+KL ++ R+AF E+HL D+FDSA+ P+ G RWWL AEDP
Sbjct: 596 LGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVEDHLADIFDSAENPVNGNRWWLTAEDP 655
Query: 661 LQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDR 720
QCLAACINLSEAL+S +P T ISH+P+H AAAVNLV G++
Sbjct: 656 FQCLAACINLSEALKSSSPHTVISHLPIHQPE-----------------AAAVNLVAGEK 698
Query: 721 PADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVG 780
PADVY+ IA+RV E++ +D+ KDP TN QVDRKLVKQTVMTSVYGVTYVG
Sbjct: 699 PADVYTEIAARVHELIERDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVG 758
Query: 781 ARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST 840
AR+QIKRRL+E+ I DD LFSASCY AK TLTAL E+F+AAR IM WL DCAKVIAS
Sbjct: 759 AREQIKRRLEEKGQITDDRLLFSASCYTAKVTLTALGELFQAARDIMGWLGDCAKVIASE 818
Query: 841 NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLD 900
++PV+WTTP+GLP VQPY + R +I+TSLQVL+L+RE V V++Q TAFPPNFVHSLD
Sbjct: 819 DQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGSSVKVRKQRTAFPPNFVHSLD 878
Query: 901 GSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 954
GSHMMMTAVAC+ A L FAGVHDS+WTHACDVD MNRILREKFVELY ILEN
Sbjct: 879 GSHMMMTAVACRDADLRFAGVHDSFWTHACDVDLMNRILREKFVELYSMSILEN 932
>B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0196710 PE=3 SV=1
Length = 589
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/561 (78%), Positives = 492/561 (87%)
Query: 430 RYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVI 489
RYDKGA+LFLPSYVMRTHGA+QQ EAVK P QL+P+FEALD+LG+TKWRIN+R+L V+
Sbjct: 29 RYDKGAHLFLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVV 88
Query: 490 SQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELK 549
+IW SGGRL DLVDR+DV +RKWK +++ KEN ERHSQRC+ ELK
Sbjct: 89 DRIWNSGGRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELK 148
Query: 550 LAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 609
LAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL
Sbjct: 149 LAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 208
Query: 610 KIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACIN 669
KIHLANL+AGGVDKL Y+ R+AFTENHLDD+FDSADRPLEG+RWWL AEDP QCLA CI+
Sbjct: 209 KIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCID 268
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L+EALRS +PET ISHVP+H DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA
Sbjct: 269 LTEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 328
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
RVL+IMRKDA+KDP+ QVDRKLVKQTVMTSVYGVTY+GARDQIKRRL
Sbjct: 329 VRVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 388
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTP 849
KER I DD+E+F ASCYAAK TLTAL EMFEAARSIMSWL +CAK+IAS NEPVRWTTP
Sbjct: 389 KERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTP 448
Query: 850 IGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
+GLP VQPYR GR +IKTSLQVL+L++ET+KV+VKRQ TAFPPNFVHSLDGSHMMMTAV
Sbjct: 449 LGLPVVQPYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 508
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
CK+AGL+FAGVHDSYWTHACDVD+MNRILREKFVELYE P+LENLLESFQ+SFP L+FP
Sbjct: 509 TCKRAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFP 568
Query: 970 PLPERGDFDLREVLNSQYFFN 990
PLPERGDFDL++VL S YFFN
Sbjct: 569 PLPERGDFDLQDVLKSPYFFN 589
>M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Triticum urartu
GN=TRIUR3_29385 PE=4 SV=1
Length = 854
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/823 (58%), Positives = 574/823 (69%), Gaps = 111/823 (13%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQ+++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+AEQE+
Sbjct: 45 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQEL 104
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
+ + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA+E+E
Sbjct: 105 VSERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAVEHE 163
Query: 254 ARIXX-XXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXS 312
RI E D + A E +L +
Sbjct: 164 VRIHKFLEKTKKKNTKEVDKVVEAVDADI---AKEQERLR----------------KKVT 204
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
L+K+QK++QV ++K D +PWGQ+A AKVG R+++L IETA+IQ P SQ G S
Sbjct: 205 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDST--- 261
Query: 373 RPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYD 432
P + F M V + +KS + VI
Sbjct: 262 -PEIRPAFTHEMRT----------------VAREQQKSRRYGVI---------------- 288
Query: 433 KGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQI 492
+C+ + R ++ ALD+LG+TKWR+N+++L ++ +I
Sbjct: 289 -------------------KCDPLVRQGLDR-----TALDNLGSTKWRVNKKVLSIVDRI 324
Query: 493 WTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
W+SGGRLADLVDR DV ++KW+ +++ KEN+ERHSQRC++ELKLAV
Sbjct: 325 WSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAV 384
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
ARKMKEE GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIH
Sbjct: 385 ARKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIH 444
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
LANLY GGVDKL Y+ R+AFTENHLDD+FDSA+RPLEG+RWWLEAEDP QCLA C++L+E
Sbjct: 445 LANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNE 504
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
ALRSP+PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSGIA+RV
Sbjct: 505 ALRSPSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARV 564
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
+EIM++DA+KDP ++ QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKER
Sbjct: 565 VEIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKER 624
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
I DDSELF ASCYAAK TLTAL EMFEAARSIM+WL DCAK
Sbjct: 625 GVIADDSELFGASCYAAKVTLTALGEMFEAARSIMTWLGDCAK----------------- 667
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACK 912
IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 668 -------------IKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 714
Query: 913 KAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
K GL FAGVHDSYWTHACDVD MN+ILREKFVELY+APILEN+
Sbjct: 715 KQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENV 757
>Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=2 SV=1
Length = 1065
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/877 (53%), Positives = 601/877 (68%), Gaps = 19/877 (2%)
Query: 122 LLDRKA-KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWF 180
LL++K+ K K L KRQVK+ETEAW++AA EY+EL+ ++C + L PNLP+ +SL L WF
Sbjct: 200 LLEQKSRKRKARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWF 259
Query: 181 EPLKSAIVAEQEVC----KKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGC 236
EPL+ I+ EQ + HR M + PY LPAD +AVITMH+LMGLLM + GC
Sbjct: 260 EPLRDGILEEQRAYGNREHREHRSM-YGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GC 317
Query: 237 ARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXX 296
+VIHAA+ IGEA+E E RI D + +E + +D
Sbjct: 318 VKVIHAAVVIGEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA-NNEELEATRKADLKS 376
Query: 297 XXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETA 356
L+KQ K+++V I+K +PW K+G R+++L++ET+
Sbjct: 377 KKVVRDKV-------KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETS 429
Query: 357 YIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI 416
++++P Q G ++RPAF+H FK + Q R YG+IECD LV +++S K+MV+
Sbjct: 430 FVRAPACQDGDDFGELRPAFQHKFKNHVL-RQNVNRIYGVIECDQLVLAEIDQSVKHMVM 488
Query: 417 PYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGN 476
PY+PMLV P W +++G YL+L S +MRT GAK+Q AV P ++ + EAL+ LG
Sbjct: 489 PYMPMLVKPLPWKGFNEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGE 548
Query: 477 TKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKEN 536
T WR+N+R+L+V+ ++W +GG +ADLV+ DDV KWK V + N
Sbjct: 549 TGWRVNKRVLEVVEKLWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTN 608
Query: 537 NERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA 596
+ERHS RC+ ELKL VA+K+ +E+ FYYPHN+DFRGRAYPMHP+LNHLG+DLCRG+L FA
Sbjct: 609 SERHSLRCDTELKLGVAKKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFA 668
Query: 597 EGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLE 656
+G+PLG SGLRW+KI LANLY G V K+ ++ R AF E+ ++++ DSA+RPL+G R WL+
Sbjct: 669 DGKPLGPSGLRWIKIQLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLK 728
Query: 657 AEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLV 716
AEDP Q LAACI+L +AL S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNL+
Sbjct: 729 AEDPFQFLAACIDLRDALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLI 788
Query: 717 RGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGV 776
GD+PADVYSGIA RV IM KDA K+P T+ Q+DRKLVKQTVMTSVYGV
Sbjct: 789 AGDKPADVYSGIAERVKIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGV 848
Query: 777 TYVGARDQIKRRLKERCAIE-DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAK 835
T++GAR QI RLKER I D + + A+CYAAK TL AL EMF+ AR IMSWL DCAK
Sbjct: 849 TFIGARMQILNRLKERSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAK 908
Query: 836 VIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPP 893
+IA+ VRWT+P+GLP VQPYR+ R ++KTSLQVL+LR D VL RQ +AFPP
Sbjct: 909 IIAAAGHTVRWTSPLGLPIVQPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPP 968
Query: 894 NFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILE 953
NFVHSLD SHMMMTA+AC KAGL FAGVHDSYWTHA DV+ MN ILR+ FV+LY+ PILE
Sbjct: 969 NFVHSLDSSHMMMTALACSKAGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILE 1028
Query: 954 NLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
NLL FQ FP L FP +P RGD DL+EVL S YFFN
Sbjct: 1029 NLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065
>A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223008 PE=3 SV=1
Length = 1065
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/877 (53%), Positives = 600/877 (68%), Gaps = 19/877 (2%)
Query: 122 LLDRKA-KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWF 180
LL++K+ K K L KRQVK+ETEAW++AA EY+EL+ ++C + L PNLP+ +SL L WF
Sbjct: 200 LLEQKSRKRKARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWF 259
Query: 181 EPLKSAIVAEQEVC----KKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGC 236
EPL+ I+ EQ + HR M + PY LPAD +AVITMH+LMGLLM + GC
Sbjct: 260 EPLRDGILEEQRAYGNREHREHRSM-YGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GC 317
Query: 237 ARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXX 296
+VIHAA+ IGEA+E E RI D + +E + +D
Sbjct: 318 VKVIHAAVVIGEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA-NNEELEATRKADLKS 376
Query: 297 XXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETA 356
L+KQ K+++V I+K +PW K+G R+++L++ET+
Sbjct: 377 KKVVRDKV-------KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETS 429
Query: 357 YIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI 416
++++P Q G ++RPAF+H FK + Q R YG+IECD LV +++S K+MV+
Sbjct: 430 FVRAPACQDGDDFGELRPAFQHKFKNHVL-RQNVNRIYGVIECDQLVLAEIDQSVKHMVM 488
Query: 417 PYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGN 476
PY+PMLV P W +++G YL+L S +MRT GAK+Q AV P ++ + EAL+ LG
Sbjct: 489 PYMPMLVKPLPWKGFNEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGE 548
Query: 477 TKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKEN 536
T WR+N+R+L+V+ ++W +GG +ADLV+ DDV KWK V + N
Sbjct: 549 TGWRVNKRVLEVVEKLWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTN 608
Query: 537 NERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA 596
+ERHS RC+ ELKL VA K+ +E+ FYYPHN+DFRGRAYPMHP+LNHLG+DLCRG+L FA
Sbjct: 609 SERHSLRCDTELKLGVANKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFA 668
Query: 597 EGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLE 656
+G+PLG SGLRW+KI LANLY G V K+ ++ R AF E+ ++++ DSA+RPL+G R WL+
Sbjct: 669 DGKPLGPSGLRWIKIQLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLK 728
Query: 657 AEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLV 716
AEDP Q LAACI+L +AL S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNL+
Sbjct: 729 AEDPFQFLAACIDLRDALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLI 788
Query: 717 RGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGV 776
GD+PADVYSGIA RV IM KDA K+P T+ Q+DRKLVKQTVMTSVYGV
Sbjct: 789 AGDKPADVYSGIAERVKIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGV 848
Query: 777 TYVGARDQIKRRLKERCAIE-DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAK 835
T++GAR QI RLKER I D + + A+CYAAK TL AL EMF+ AR IMSWL DCAK
Sbjct: 849 TFIGARMQILNRLKERSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAK 908
Query: 836 VIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPP 893
+IA+ VRWT+P+GLP VQPYR+ R ++KTSLQVL+LR D VL RQ +AFPP
Sbjct: 909 IIAAAGHTVRWTSPLGLPIVQPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPP 968
Query: 894 NFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILE 953
NFVHSLD SHMMMTA+AC KAGL FAGVHDSYWTHA DV+ MN ILR+ FV+LY+ PILE
Sbjct: 969 NFVHSLDSSHMMMTALACSKAGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILE 1028
Query: 954 NLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
NLL FQ FP L FP +P RGD DL+EVL S YFFN
Sbjct: 1029 NLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065
>Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=3 SV=1
Length = 1065
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/877 (53%), Positives = 600/877 (68%), Gaps = 19/877 (2%)
Query: 122 LLDRKA-KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWF 180
LL++K+ K K L KRQVK+ETEAW++AA EY+EL+ ++C + L PNLP+ +SL L WF
Sbjct: 200 LLEQKSRKRKARELHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWF 259
Query: 181 EPLKSAIVAEQEVC----KKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGC 236
EPL+ I+ EQ + HR M + PY LPAD +AVITMH+LMGLLM + GC
Sbjct: 260 EPLRDGILEEQRAYGNREHREHRSM-YGPYMCQLPADMLAVITMHRLMGLLMCDQEH-GC 317
Query: 237 ARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXX 296
+VIHAA+ IGEA+E E RI D + +E + +D
Sbjct: 318 VKVIHAAVVIGEAVEQEVRIFQLMNSQKKSKDAEGNTNSLGDVA-NNEELEATRKADLKS 376
Query: 297 XXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETA 356
L+KQ K+++V I+K +PW K+G R+++L++ET+
Sbjct: 377 KKVVRDKV-------KKLVKQNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETS 429
Query: 357 YIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI 416
++++P Q G ++RPAF+H FK + Q R YG+IECD LV +++S K+MV+
Sbjct: 430 FVRAPACQDGDDFGELRPAFQHKFKNHVL-RQNVNRIYGVIECDQLVLAEIDQSVKHMVM 488
Query: 417 PYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGN 476
PY+PMLV P W +++G YL+L S +MRT GAK+Q AV P ++ + EAL+ LG
Sbjct: 489 PYMPMLVKPLPWKGFNEGGYLYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGE 548
Query: 477 TKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKEN 536
T WR+N+R+L+V+ ++W +GG +ADLV+ DDV KWK V + N
Sbjct: 549 TGWRVNKRVLEVVEKLWKAGGGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTN 608
Query: 537 NERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA 596
+ERHS RC+ ELKL VA K+ +E+ FYYPHN+DFRGRAYPMHP+LNHLG+DLCRG+L FA
Sbjct: 609 SERHSLRCDTELKLGVADKLIDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFA 668
Query: 597 EGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLE 656
+G+PLG SGLRW+KI LANLY G V K+ ++ R AF E+ ++++ DSA+RPL+G R WL+
Sbjct: 669 DGKPLGPSGLRWIKIQLANLYGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLK 728
Query: 657 AEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLV 716
AEDP Q LAACI+L +AL S PET +SH+PVH DGSCNGLQHYAALGRD++GA +VNL+
Sbjct: 729 AEDPFQFLAACIDLRDALASGNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLI 788
Query: 717 RGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGV 776
GD+PADVYSGIA RV IM KDA K+P T+ Q+DRKLVKQTVMTSVYGV
Sbjct: 789 AGDKPADVYSGIAERVEIIMEKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGV 848
Query: 777 TYVGARDQIKRRLKERCAIE-DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAK 835
T++GAR QI RLKER I D + + A+CYAAK TL AL EMF+ AR IMSWL DCAK
Sbjct: 849 TFIGARMQILNRLKERSPIAVDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAK 908
Query: 836 VIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPP 893
+IA+ VRWT+P+GLP VQPYR+ R ++KTSLQVL+LR D VL RQ +AFPP
Sbjct: 909 IIAAAGHTVRWTSPLGLPIVQPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPP 968
Query: 894 NFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILE 953
NFVHSLD SHMMMTA+AC KAGL FAGVHDSYWTHA DV+ MN ILR+ FV+LY+ PILE
Sbjct: 969 NFVHSLDSSHMMMTALACSKAGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILE 1028
Query: 954 NLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
NLL FQ FP L FP +P RGD DL+EVL S YFFN
Sbjct: 1029 NLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065
>K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 884
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/799 (56%), Positives = 574/799 (71%), Gaps = 23/799 (2%)
Query: 122 LLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFE 181
L D + + K +LR+RQ+K ETEA E+ +EY+EL ++ E+ L PNLP++K+LFLGWF+
Sbjct: 103 LNDIEEEKKLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFD 162
Query: 182 PLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
PLK AI AEQ+ + K AP+ + LPA K+AVI MHK+MGL+ + GC ++
Sbjct: 163 PLKEAIEAEQKSKRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVD 222
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
AA+QIG A+E E RI +E +++N K
Sbjct: 223 AAVQIGMAVEQEVRIHKFLEKTRSHQSKKTEAGDE-------DSMDNDK----------- 264
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSP 361
+ LIK+++++QV ++K + PWG++ +AK+G R+++LLIETA++ SP
Sbjct: 265 ---QKLRKHVNGLIKRRRLKQVQMLLKEKES-GPWGRDTQAKLGSRLIELLIETAFVHSP 320
Query: 362 VSQLGGSPPDIRPAFKHTFKTAMAD-SQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLP 420
V+Q +PPDIRPAF+H FK + QK ++ YG+IECDPLV G++KS K+M++PY+P
Sbjct: 321 VNQSADTPPDIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMP 380
Query: 421 MLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWR 480
MLVPP W Y+KG +LFLPSY+MRTHG+K+Q + +K Q++ +FEALD+LGNTKWR
Sbjct: 381 MLVPPKKWKGYEKGGHLFLPSYIMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWR 440
Query: 481 INQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERH 540
+N+RLL+V+ +W GG +A L+DR DV I++WK V+ K N ERH
Sbjct: 441 VNRRLLNVVESLWAGGGNIAGLIDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERH 500
Query: 541 SQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
S RC+ ELKL+VA+KMK+E+GFYYPHNVDFRGRAYPMH +LNHL DLCRG+LEFAEGRP
Sbjct: 501 SLRCDTELKLSVAQKMKDEEGFYYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRP 560
Query: 601 LGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDP 660
LG+SGL WLKIHLANLYAGG++KL Y+ R+AF ENHL D+FDSAD P+ G RWWL A+DP
Sbjct: 561 LGESGLCWLKIHLANLYAGGIEKLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDP 620
Query: 661 LQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDR 720
QCLAACINLSEALRS +P + I H+P+H DGSCNGLQHYAALGRD L AAAVNLV ++
Sbjct: 621 FQCLAACINLSEALRSSSPNSVILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEK 680
Query: 721 PADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVG 780
PADVYS IA RV +IMRKD KDP Q+DRKLVKQTVMTSVYGVT+VG
Sbjct: 681 PADVYSEIAVRVHDIMRKDCIKDPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVG 740
Query: 781 ARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST 840
AR+QIKRRL+E+ I D+ LF+A+CYAAK TLTAL E+F AAR IM WL DCAKVIA
Sbjct: 741 AREQIKRRLEEKGLITDEKLLFAAACYAAKVTLTALGEIFGAARVIMGWLGDCAKVIAFE 800
Query: 841 NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLD 900
N+PVRWTTP+GLP VQPY + R +IKTSLQ L+LRRE + V K+Q +AFPPNFVHSLD
Sbjct: 801 NQPVRWTTPLGLPVVQPYCKTERHLIKTSLQFLALRREGNAVDAKKQRSAFPPNFVHSLD 860
Query: 901 GSHMMMTAVACKKAGLDFA 919
GSHMMMTA+AC+ AGL FA
Sbjct: 861 GSHMMMTALACRDAGLCFA 879
>K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 690
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/734 (63%), Positives = 541/734 (73%), Gaps = 47/734 (6%)
Query: 1 MWAHLAKR---TFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS 57
MW +LAKR T + F++ S P RF + K + P P +G
Sbjct: 1 MWTNLAKRASSTLRNTFRVSSLYP--RFCKPQT--SKTINPYPFQAFPKAG--------- 47
Query: 58 INELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEV 117
+ RS F +E G++SVAEAI S+DTE+D ++QM K E
Sbjct: 48 ---VSRSKFLFYE-------------GFSSVAEAI-ESTDTEDDYDEVQKLLQQMAKAEH 90
Query: 118 KGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFL 177
K + + R RQ+K ETEAW EAA+EY+ELLED+ EQKL PNLPYMKSLFL
Sbjct: 91 KVDNSSSSSSYKYKLLKR-RQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFL 149
Query: 178 GWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA 237
GWFEPL++AI+A+QE+CK S +M+HAPYFNDLPAD MAV+TMHKLM LLMTN NG+G A
Sbjct: 150 GWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTA 209
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
RVI AA QIGEA+ENEARI E+ GE ENG++
Sbjct: 210 RVIQAACQIGEAVENEARIYQFMKREKENKSSHVVPVEQ-RGELTE---ENGEMD----- 260
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
++L+K+QK Q MGI++G DDWK WGQEA+ KVG R+MQLLIETAY
Sbjct: 261 ----KKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVKVGSRLMQLLIETAY 316
Query: 358 IQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP 417
IQ P + +G PPDIRPAFKHT KT ++SQK+ RRYG+IECDPLV GLEKSA++MVIP
Sbjct: 317 IQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLVQNGLEKSARHMVIP 376
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNT 477
Y+PMLVPP NWT YDKGAYLFLPSYVMR HGAKQQ EAVKRAP +QL+P+FEAL++LG+T
Sbjct: 377 YMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGST 436
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
KWR+N+R+L VI QIW +GGRLADLVDR++V IRKWK +VK + KENN
Sbjct: 437 KWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIRKWKWKVKAVKKENN 496
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
ERHSQRC+IELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF+E
Sbjct: 497 ERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSE 556
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
GRPLGKSGL WLKIHLANLYAGGVDKL Y+ R+ FTENHLDD+FDSADRPLEG+RWWL+A
Sbjct: 557 GRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDSADRPLEGKRWWLQA 616
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
EDP QCLAAC NLSEALRSPTPETTISH+PVH DGSCNGLQHYAALGRDKLGAAAVNLV
Sbjct: 617 EDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVG 676
Query: 718 GDRPADVYSGIASR 731
GD+PADVYSGIA+R
Sbjct: 677 GDQPADVYSGIAAR 690
>B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor) OS=Selaginella
moellendorffii GN=rpoT PE=3 SV=1
Length = 1002
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/911 (49%), Positives = 596/911 (65%), Gaps = 55/911 (6%)
Query: 100 EDCSGGANEVKQMVKKEVKGKPLLDRKAKYKDTMLR-----------KRQVKMETEAWEE 148
E C G EV + + E L+R +K++ RQ K+E +AW+
Sbjct: 127 EACFGEEEEVGVLPELEEIHDISLERSSKFEGGKALKAARARARRLFNRQQKLELDAWDA 186
Query: 149 AAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKK---SHRKMTHAP 205
A +EY+++L ++C +KL PNLP+ KSL + WFEP++ I E + +K + + P
Sbjct: 187 AVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKAIEKEEPGEDRSHYGP 246
Query: 206 YFND--LPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXX 263
L AD +AVITMH+L+ L+M + + GC R+ + A+ IG+A+E E +I
Sbjct: 247 LLKGAGLTADVLAVITMHRLVALMMQDVDS-GCIRLANTAVLIGDAVEQEIKIRR----- 300
Query: 264 XXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQ---QKM 320
A++ K + +++ ++
Sbjct: 301 ---------------------ALKKRKPKELAEEAEPPTPEEEKKEYLKDKLRRAIIERP 339
Query: 321 QQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTF 380
+ V I+K LD +PW +AK+GCR++ +++ ++I PVS +IRPAF+H
Sbjct: 340 RNVKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSDCPEDGTEIRPAFRHVL 399
Query: 381 KTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLP 440
K +R YG I CDP + ++ SAK +V+PY+PML+PP W Y GAYL L
Sbjct: 400 KVPKGGL---LRSYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPPRAWKGYHNGAYLHLR 456
Query: 441 SYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLA 500
S +MRTHG+KQQ EAV+ P QL+ +F ALD+LG W+IN+ + +VI ++W++GG +
Sbjct: 457 SVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKINKEVFEVIEKLWSAGGGIG 516
Query: 501 DLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEK 560
LVDR DV +R W++ + N+ER+SQRC++ELKLAVAR +K+E+
Sbjct: 517 GLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCDLELKLAVARSLKDEE 576
Query: 561 GFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGG 620
FYYPHN+DFRGRAYPMH +LNHLGSD+CRG+L FA+GRPLG +GLRWLKIH+AN++A G
Sbjct: 577 CFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTGLRWLKIHIANVFANG 636
Query: 621 VDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPE 680
DKL ++ RVAF E++L+ V SA++PL+ RWWL+AEDP QCLAACI+L A+ SP PE
Sbjct: 637 ADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQCLAACIDLRNAMHSPNPE 695
Query: 681 TTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA 740
ISH+PVH DGSCNGLQHYAALGRDK GA AVNL+ D PADVYSGIA+RV ++ +DA
Sbjct: 696 YYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPADVYSGIAARVRTLVEEDA 755
Query: 741 EKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSE 800
KDP VDRKLVKQTVMTSVYGVTYVGAR+QI RL+++ I D+
Sbjct: 756 RKDPAA----VYAKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQITNRLRDKGFILDEPT 811
Query: 801 LFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQ 860
L+ CYAAK TL AL EMF AR IM+WL CAKVIA+ + VRW TP+GLP VQPYR+
Sbjct: 812 LYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKVIANDGDSVRWITPLGLPVVQPYRR 871
Query: 861 IGRSIIKTSLQVLSLRRETDK-VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFA 919
GR ++KT LQ L LR +TD+ VL RQ +AFPPNFVHS+DGSHMMMTAVAC++AGL FA
Sbjct: 872 PGRHVVKTCLQCLILRTDTDQPVLAARQRSAFPPNFVHSMDGSHMMMTAVACQEAGLTFA 931
Query: 920 GVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDL 979
GVHDS+WTHA DV+ MN ILREKFVELYE PILENLLESFQK +PKL FP LP RGD DL
Sbjct: 932 GVHDSFWTHAGDVERMNVILREKFVELYEQPILENLLESFQKRWPKLKFPDLPVRGDLDL 991
Query: 980 REVLNSQYFFN 990
+EVL+S YFFN
Sbjct: 992 KEVLSSPYFFN 1002
>F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=SCA3 PE=2 SV=1
Length = 895
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/758 (56%), Positives = 548/758 (72%), Gaps = 31/758 (4%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE EY++L +++CE+ L PNLPY+K +FLGWF+PLK I
Sbjct: 156 KRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVI 215
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ++ K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 216 EREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 274
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE E RI H ++ + ++
Sbjct: 275 IGIAIEQEVRI--------------------------HNFLKRTRKNNAGDSQEELKEKQ 308
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LLIE AY+Q P++Q
Sbjct: 309 LLRKRVNSLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQS 367
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P+ RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 368 GDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 427
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A+K + +FEALD+LGNTKWR+N+
Sbjct: 428 PKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRN 487
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV ++ WK + K N ERHS RC
Sbjct: 488 ILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRC 547
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 548 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 607
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLYAGGV+KL +++R+AF ENHLDD+ DSA+ P+ G+RWWL+AEDP QCL
Sbjct: 608 GLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCL 667
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++AL+SP+P + ISH+P+H DGSCNGLQHYAALGRD AAAVNLV G++PADV
Sbjct: 668 AACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADV 727
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+Q
Sbjct: 728 YSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQ 787
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPV 844
IKRRL+E+ I D+ LF+A+CY+AK TL AL E+FEAAR+IMSWL DCAK+IAS N PV
Sbjct: 788 IKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPV 847
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKV 882
RW TP+GLP VQPY + R +I+TSLQVL+L+RE + V
Sbjct: 848 RWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTV 885
>D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_108034 PE=3 SV=1
Length = 831
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/866 (51%), Positives = 582/866 (67%), Gaps = 44/866 (5%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
L RQ K+E +AW+ A +EY+++L ++C +KL PNLP+ KSL + WFEP++ I E +
Sbjct: 1 LFNRQQKLELDAWDAAVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKA 60
Query: 194 CKK---SHRKMTHAPYFND--LPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGE 248
+K + + P L AD +AVITMH+L+ L+M + + GC R+ + A+ IG+
Sbjct: 61 IEKEEPGEDRSHYGPLLKGAGLTADVLAVITMHRLVALMMQDVDS-GCIRLANTAVLIGD 119
Query: 249 AIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXX 308
A+E E +I A++ K +
Sbjct: 120 AVEQEIKIRR--------------------------ALKKRKPKELAEEAEPPTPEEEKK 153
Query: 309 XXXSSLIKQ---QKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+++ ++ + V I+K LD +PW +AK+GCR++ +++ ++I PVS
Sbjct: 154 EYLKDKLRRAIIERPRNVKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSDC 213
Query: 366 GGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPP 425
+IRPAF+H K +R YG I CDP + ++ SAK +V+PY+PML+PP
Sbjct: 214 PEDGTEIRPAFRHVLKVPKGGL---LRSYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPP 270
Query: 426 NNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRL 485
W Y GAYL L S +MRTHG+KQQ EAV+ P QL+ +F ALD+LG W+IN+ +
Sbjct: 271 RAWKGYHNGAYLHLRSVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKINKEV 330
Query: 486 LDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
+VI ++W++GG + LVDR DV +R W++ + N+ER+SQRC+
Sbjct: 331 FEVIEKLWSAGGGIGGLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCD 390
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
+ELKLAVAR +K+E+ FYYPHN+DFRGRAYPMH +LNHLGSD+CRG+L FA+GRPLG +G
Sbjct: 391 LELKLAVARSLKDEECFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTG 450
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
LRWLKIH+AN++A G DKL ++ RVAF E++L+ V SA++PL+ RWWL+AEDP QCLA
Sbjct: 451 LRWLKIHIANVFANGADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQCLA 509
Query: 666 ACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVY 725
ACI+L A+ SP PE ISH+PVH DGSCNGLQHYAALGRDK GA AVNL+ D PADVY
Sbjct: 510 ACIDLRNAMHSPNPEYYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPADVY 569
Query: 726 SGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQI 785
SGIA+RV ++ +DA KDP VDRKLVKQTVMTSVYGVTYVGAR+QI
Sbjct: 570 SGIAARVRTLVEEDARKDPAA----VYAKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQI 625
Query: 786 KRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR 845
RL+++ I D+ L+ CYAAK TL AL EMF AR IM+WL CAKVIA+ + VR
Sbjct: 626 TNRLRDKGFILDEPTLYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKVIANDGDSVR 685
Query: 846 WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK-VLVKRQSTAFPPNFVHSLDGSHM 904
W TP+GLP VQPYR+ GR ++KT LQ L LR +TD+ VL RQ +AFPPNFVHS+DGSHM
Sbjct: 686 WITPLGLPVVQPYRRPGRHVVKTCLQCLILRTDTDQPVLAARQRSAFPPNFVHSMDGSHM 745
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
MMTAVAC++AGL FAGVHDS+WTHA DV+ MN ILREKFVELYE PILENLLESFQK +P
Sbjct: 746 MMTAVACQEAGLTFAGVHDSFWTHAGDVERMNVILREKFVELYEQPILENLLESFQKRWP 805
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
KL FP LP RGD DL+EVL+S YFFN
Sbjct: 806 KLKFPDLPVRGDLDLKEVLSSPYFFN 831
>G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_7g017440 PE=3 SV=1
Length = 895
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/562 (75%), Positives = 477/562 (84%), Gaps = 2/562 (0%)
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
+DKG YLFLPSYVMRTHG KQQ EAVK+ P QLEP+FEALD+LGNTKWR+N ++L V+
Sbjct: 334 FDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKVLSVVD 393
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
+IW GGRLA LVDR+DV +KWK +VK++ KEN ER+S RC+ ELKL
Sbjct: 394 RIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCDTELKL 453
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
AVARKMK+E+ FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSGL WLK
Sbjct: 454 AVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLK 513
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
IHLANLY GGVDKL E R+ F ENHLD++FDSA++P+EGRRWWL AEDP Q LAAC+ L
Sbjct: 514 IHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLAACMTL 573
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
+EAL+ TPE+ ISH+PVH DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA+
Sbjct: 574 TEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 633
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
RVL IM+ DA+KDPET S QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLK
Sbjct: 634 RVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 693
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
ER AI DDSELF A+CYAAK TLTAL+EMFE ARSIM+WL DCAKVIAS NEPV WTTP+
Sbjct: 694 ERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKVIASENEPVCWTTPL 753
Query: 851 GLPAVQPYRQIGRSI--IKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
GLP VQPYR GR I +KTSLQ+L+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMTA
Sbjct: 754 GLPVVQPYRYQGRHIVSVKTSLQMLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 813
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNF 968
+ACKKAGL FAGVHDSYWTHACDVD MNRILREKFVELYE PILENLLESFQ+SFP L F
Sbjct: 814 IACKKAGLSFAGVHDSYWTHACDVDNMNRILREKFVELYETPILENLLESFQESFPSLEF 873
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
PPLPERG+ DL EVL S YFFN
Sbjct: 874 PPLPERGNLDLNEVLESPYFFN 895
>N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcomitrella patens
GN=rpoTm PE=2 SV=1
Length = 1010
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/893 (48%), Positives = 581/893 (65%), Gaps = 28/893 (3%)
Query: 103 SGGANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICE 162
+G A E K+M +K K K LR+RQ+ ETEAW A +Y+E + ++C
Sbjct: 141 AGAAVEAKEMERK----------KGHNKLQELRQRQIINETEAWTNAEAQYEEFIAEMCR 190
Query: 163 QKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSH---RKMTHAPYFNDLPADKMAVIT 219
+KL PNLP + L LGW+EPL+ AI EQ + + ++ P+ LP ++AVIT
Sbjct: 191 KKLAPNLPASQLLLLGWYEPLRDAIAEEQRAFSELEFRGERASYGPFLCQLPPSQLAVIT 250
Query: 220 MHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDG 279
MH L+ L+M+N +G +VI AAL IGEA+E E I + DG
Sbjct: 251 MHCLLALVMSNEK-MGYVKVIQAALHIGEAVEQEVLIRKLRIGKAKKNETKRKGITKDDG 309
Query: 280 EFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQE 339
+ IE+GK+ + + K +K++ +++ PWG
Sbjct: 310 I---STIESGKVE--------LTTSPELPTQATGMQKLRKLRLWRSMLQKASGSDPWGPT 358
Query: 340 ARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIEC 399
AKVG R+++L +ETA I+ P S P F+HT K + S + +G++EC
Sbjct: 359 IYAKVGSRLLELFMETAVIRVP-SDDPHVDASFEPVFQHTNKKFVCTSGRSSTGFGVVEC 417
Query: 400 DPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRA 459
+PLV + ++KS K +++PY+PM+ P +W + G YLFL S +MRTHG+K+Q + K
Sbjct: 418 NPLVLEQIDKSVKYVIMPYMPMVSKPKHWKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNT 477
Query: 460 PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXX 519
P ++ IF+AL+ LG T WR+N+ +L V+ QIW GGRLA+LVD +DV
Sbjct: 478 PRENMKKIFQALNVLGETGWRVNKPVLAVLEQIWKEGGRLANLVDAEDVLVPAKPETNNL 537
Query: 520 XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHP 579
++ W+R+V + + N ER+S RC++ELKLAVARK+ E FY PHN+DFRGRAYPMHP
Sbjct: 538 DELKSWRREVGIVKRTNYERYSLRCDVELKLAVARKLVNEDAFYLPHNLDFRGRAYPMHP 597
Query: 580 YLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDD 639
LNHLGSD+CRG+LEFA+GRPLG++GLRWLKIHLANLY G + KL +++RVA + H+DD
Sbjct: 598 NLNHLGSDMCRGVLEFAKGRPLGETGLRWLKIHLANLYGGSISKLSFDARVAHVDTHMDD 657
Query: 640 VFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQH 699
VFDSA+ P+ G RWWL+AEDP Q LAACI++ A++S P+T S +PVH DGSCNGLQH
Sbjct: 658 VFDSAENPMNGNRWWLKAEDPFQFLAACIDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQH 717
Query: 700 YAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQ 759
YAALGRD++GA VNL+ GD PADVYS IA RV + K A K+PE + Q
Sbjct: 718 YAALGRDRIGAGTVNLLAGDVPADVYSAIADRVHRTIEKAALKNPEASKHAAIARVLLGQ 777
Query: 760 VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEM 819
+DRKLVKQT+MTSVYGVT+VGAR QI RLKER I+D ELF AS YAAK TL AL E
Sbjct: 778 IDRKLVKQTIMTSVYGVTFVGARIQILNRLKERGIIQDGGELFKASVYAAKVTLDALGEG 837
Query: 820 FEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR-E 878
F AR IM+WL++CA++IA + V+WTTP+GL VQPYR R ++KT+LQ L +R +
Sbjct: 838 FREARCIMNWLSECAQIIAHSGNSVKWTTPLGLEVVQPYRNPSRHLVKTALQDLHIRSVD 897
Query: 879 TDK-VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
D VL RQ +AF PNF+HSLD +HMM+TA+A +AG+ FAGVHDS+WTHA DVD +N+
Sbjct: 898 VDSPVLKTRQRSAFAPNFIHSLDSTHMMLTALASNQAGISFAGVHDSFWTHAGDVDVLNK 957
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+ REKFVELY PILENLL FQ+ + L FPP+PERG D+REVL + YFFN
Sbjct: 958 LTREKFVELYSYPILENLLLGFQRRYADLTFPPVPERGVLDIREVLKAPYFFN 1010
>A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_222742 PE=3 SV=1
Length = 861
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/871 (49%), Positives = 573/871 (65%), Gaps = 18/871 (2%)
Query: 125 RKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLK 184
+K K LR+RQ+ ETEAW A +Y+E + ++C +KL PNLP + L LGW+EPL+
Sbjct: 4 KKGHNKLQELRQRQIINETEAWTNAEAQYEEFIAEMCRKKLAPNLPASQLLLLGWYEPLR 63
Query: 185 SAIVAEQEVCKKSH---RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
AI EQ + + ++ P+ LP ++AVITMH L+ L+M+N +G +VI
Sbjct: 64 DAIAEEQRAFSELEFRGERASYGPFLCQLPPSQLAVITMHCLLALVMSNEK-MGYVKVIQ 122
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
AAL IGEA+E E I + DG + IE+GK+
Sbjct: 123 AALHIGEAVEQEVLIRKLRIGKAKKNETKRKGITKDDGI---STIESGKVE--------L 171
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSP 361
+ + K +K++ +++ PWG AKVG R+++L +ETA I+ P
Sbjct: 172 TTSPELPTQATGMQKLRKLRLWRSMLQKASGSDPWGPTIYAKVGSRLLELFMETAVIRVP 231
Query: 362 VSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPM 421
S P F+HT K + + + +G++EC+PLV + ++KS K +++PY+PM
Sbjct: 232 -SDDPHVDASFEPVFQHTNKKFVCTNGRSSTGFGVVECNPLVLEQIDKSVKYVIMPYMPM 290
Query: 422 LVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRI 481
+ P +W + G YLFL S +MRTHG+K+Q + K P ++ IF+AL+ LG T WR+
Sbjct: 291 VSKPKHWKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGETGWRV 350
Query: 482 NQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHS 541
N+ +L V+ QIW GGRLA+LVD +DV ++ W+R+V + + N ER+S
Sbjct: 351 NKPVLAVLEQIWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNYERYS 410
Query: 542 QRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPL 601
RC++ELKLAVARK+ E FY PHN+DFRGRAYPMHP LNHLGSD+CRG+LEFA+GRPL
Sbjct: 411 LRCDVELKLAVARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAKGRPL 470
Query: 602 GKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPL 661
G++GLRWLKIHLANLY G + KL +++RVA + H+DDVFDSA+ P+ G RWWL+AEDP
Sbjct: 471 GETGLRWLKIHLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKAEDPF 530
Query: 662 QCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRP 721
Q LAACI++ A++S P+T S +PVH DGSCNGLQHYAALGRD++GA VNL+ GD P
Sbjct: 531 QFLAACIDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLAGDVP 590
Query: 722 ADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGA 781
ADVYS IA RV + K A K+PE + Q+DRKLVKQT+MTSVYGVT+VGA
Sbjct: 591 ADVYSAIADRVHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVTFVGA 650
Query: 782 RDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTN 841
R QI RLKER I+D ELF AS YAAK TL AL E F AR IM+WL++CA++IA +
Sbjct: 651 RIQILNRLKERGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQIIAHSG 710
Query: 842 EPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR-ETDK-VLVKRQSTAFPPNFVHSL 899
V+WTTP+GL VQPYR R ++KT+LQ L +R + D VL RQ +AF PNF+HSL
Sbjct: 711 NSVKWTTPLGLEVVQPYRNPSRHLVKTALQDLHIRSVDVDSPVLKTRQRSAFAPNFIHSL 770
Query: 900 DGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESF 959
D +HMM+TA+A +AG+ FAGVHDS+WTHA DVD +N++ REKFVELY PILENLL F
Sbjct: 771 DSTHMMLTALASNQAGISFAGVHDSFWTHAGDVDVLNKLTREKFVELYSYPILENLLLGF 830
Query: 960 QKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
Q+ + L FPP+PERG D+REVL + YFFN
Sbjct: 831 QRRYADLTFPPVPERGVLDIREVLKAPYFFN 861
>N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloroplastic
OS=Aegilops tauschii GN=F775_25754 PE=4 SV=1
Length = 887
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/897 (48%), Positives = 565/897 (62%), Gaps = 121/897 (13%)
Query: 160 ICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVIT 219
+ ++ L P LPY+KSLFLGWFEPL+ A+ +Q+V ++ K +A Y LPA+K+AVI
Sbjct: 1 MLDRHLAPQLPYVKSLFLGWFEPLRDAVARDQDVQRRKRVKHVYAKYLLLLPAEKVAVIV 60
Query: 220 MHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDG 279
MHK+MGLLM++ +G G RV+ AA IGEA+E E ++ +P
Sbjct: 61 MHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVEREYKVQAFFQKTRRKTRSKTESENDPGL 120
Query: 280 EFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQE 339
+ A SL++++K+ + +++ + + WG E
Sbjct: 121 DKEQAKCRK---------------------LVKSLVRRRKLTEAQKLVQQEIELEEWGTE 159
Query: 340 ARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIEC 399
A+ KV PD P T + ++ +++ +IEC
Sbjct: 160 AQVKVCF-----------------------PDSTPTM--TEFCLICYGRRLKKKHFVIEC 194
Query: 400 DPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRA 459
DPLV +G E +A+++ IPYLPMLVPP W YDKG +LFLPSYVMRTHG K Q EA+K
Sbjct: 195 DPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSV 254
Query: 460 PYNQLEPIFE---------ALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXX 510
P QL +FE ALD LG TKWR+N+R+ DV+ IW+ GG +A LVD+ ++
Sbjct: 255 PRKQLRKVFEQSEALSYWQALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPL 314
Query: 511 XXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDF 570
I+KWK VK K N E H++RC+ ELKL+VARKM+EE GFYYPHN+DF
Sbjct: 315 PEQPETEDPDEIQKWKWSVKKTKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDF 374
Query: 571 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRV 630
RGRAYPMHP+L+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GG++KL +ES++
Sbjct: 375 RGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKL 434
Query: 631 AFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHM 690
F E+HL D+FDSA P++G WW+ AEDP QCLAAC++LS AL S +P +SH+P+H
Sbjct: 435 TFVEDHLPDIFDSAANPVDGNCWWINAEDPFQCLAACMDLSNALESSSPHGAVSHLPIHQ 494
Query: 691 DGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS------------------RV 732
DGSCNGLQHYAALGRD +GAAAVNLV G++PAD+YS IA+ RV
Sbjct: 495 DGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARCLPRRPPFPLPSLIYPGRV 554
Query: 733 LEIMRKDAEKDPET-----------------------------------NSXXXXXXXXX 757
L+++R+D+ KDP T N
Sbjct: 555 LDVVREDSMKDPATDPSVPLAKVLVDEVSLLPAPLCLNQEIFFFMYLFFNKTVEDLDIGS 614
Query: 758 XQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAA-------- 809
QVDRKLVKQTVMTSVYGVT++GAR QI +RL+E+ I DD L+ SCYA
Sbjct: 615 LQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKLLYDVSCYATRRQGHAVT 674
Query: 810 -----KTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
K TL AL +MF++AR+IM+WL DCAK+IAS N+PVRWT+P+GLP VQPY++
Sbjct: 675 VVSLMKVTLDALGQMFQSARAIMAWLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNY 734
Query: 865 IIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDS 924
+I+TSLQ L+LRRE D + +RQ AFPPNFVHSLD SHMMMTA+ CK+AGL FAGVHDS
Sbjct: 735 MIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDSSHMMMTAITCKEAGLHFAGVHDS 794
Query: 925 YWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLRE 981
+W HACDVD+MN+ILRE+FVELY PILENLLE FQ FP + FPP P +G+FD+ E
Sbjct: 795 FWVHACDVDKMNQILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPAQGNFDIYE 851
>K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/713 (62%), Positives = 520/713 (72%), Gaps = 47/713 (6%)
Query: 1 MWAHLAKR---TFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS 57
MW +LAKR T + F++ S P RF + K + P P +G
Sbjct: 1 MWTNLAKRASSTLRNTFRVSSLYP--RFCKPQT--SKTINPYPFQAFPKAG--------- 47
Query: 58 INELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEV 117
+ RS F +E G++SVAEAI S+DTE+D ++QM K E
Sbjct: 48 ---VSRSKFLFYE-------------GFSSVAEAI-ESTDTEDDYDEVQKLLQQMAKAEH 90
Query: 118 KGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFL 177
K + + R RQ+K ETEAW EAA+EY+ELLED+ EQKL PNLPYMKSLFL
Sbjct: 91 KVDNSSSSSSYKYKLLKR-RQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFL 149
Query: 178 GWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA 237
GWFEPL++AI+A+QE+CK S +M+HAPYFNDLPAD MAV+TMHKLM LLMTN NG+G A
Sbjct: 150 GWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTA 209
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
RVI AA QIGEA+ENEARI E+ GE ENG++
Sbjct: 210 RVIQAACQIGEAVENEARIYQFMKREKENKSSHVVPVEQ-RGELTE---ENGEMD----- 260
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
++L+K+QK Q MGI++G DDWK WGQEA+ KVG R+MQLLIETAY
Sbjct: 261 ----KKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVKVGSRLMQLLIETAY 316
Query: 358 IQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP 417
IQ P + +G PPDIRPAFKHT KT ++SQK+ RRYG+IECDPLV GLEKSA++MVIP
Sbjct: 317 IQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLVQNGLEKSARHMVIP 376
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNT 477
Y+PMLVPP NWT YDKGAYLFLPSYVMR HGAKQQ EAVKRAP +QL+P+FEAL++LG+T
Sbjct: 377 YMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGST 436
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
KWR+N+R+L VI QIW +GGRLADLVDR++V IRKWK +VK + KENN
Sbjct: 437 KWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIRKWKWKVKAVKKENN 496
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
ERHSQRC+IELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF+E
Sbjct: 497 ERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSE 556
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
GRPLGKSGL WLKIHLANLYAGGVDKL Y+ R+ FTENHLDD+FDSADRPLEG+RWWL+A
Sbjct: 557 GRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDSADRPLEGKRWWLQA 616
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGA 710
EDP QCLAAC NLSEALRSPTPETTISH+PVH DGSCNGLQHYAALGRDK+ A
Sbjct: 617 EDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAALGRDKIHA 669
>K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/712 (62%), Positives = 519/712 (72%), Gaps = 47/712 (6%)
Query: 1 MWAHLAKR---TFQRNFKLPSYSPSTRFSQHSNFLEKILQPRNQSTCPVSGSAQVGVFTS 57
MW +LAKR T + F++ S P RF + K + P P +G
Sbjct: 1 MWTNLAKRASSTLRNTFRVSSLYP--RFCKPQT--SKTINPYPFQAFPKAG--------- 47
Query: 58 INELGRSNFSLFEYPFGLNSSLKLARGYASVAEAIVSSSDTEEDCSGGANEVKQMVKKEV 117
+ RS F +E G++SVAEAI S+DTE+D ++QM K E
Sbjct: 48 ---VSRSKFLFYE-------------GFSSVAEAI-ESTDTEDDYDEVQKLLQQMAKAEH 90
Query: 118 KGKPLLDRKAKYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFL 177
K + + R RQ+K ETEAW EAA+EY+ELLED+ EQKL PNLPYMKSLFL
Sbjct: 91 KVDNSSSSSSYKYKLLKR-RQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFL 149
Query: 178 GWFEPLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA 237
GWFEPL++AI+A+QE+CK S +M+HAPYFNDLPAD MAV+TMHKLM LLMTN NG+G A
Sbjct: 150 GWFEPLRNAILADQELCKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTA 209
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
RVI AA QIGEA+ENEARI E+ GE ENG++
Sbjct: 210 RVIQAACQIGEAVENEARIYQFMKREKENKSSHVVPVEQ-RGELTE---ENGEMD----- 260
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
++L+K+QK Q MGI++G DDWK WGQEA+ KVG R+MQLLIETAY
Sbjct: 261 ----KKQSRLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVKVGSRLMQLLIETAY 316
Query: 358 IQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP 417
IQ P + +G PPDIRPAFKHT KT ++SQK+ RRYG+IECDPLV GLEKSA++MVIP
Sbjct: 317 IQPPANLIGDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLVQNGLEKSARHMVIP 376
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNT 477
Y+PMLVPP NWT YDKGAYLFLPSYVMR HGAKQQ EAVKRAP +QL+P+FEAL++LG+T
Sbjct: 377 YMPMLVPPINWTGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGST 436
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
KWR+N+R+L VI QIW +GGRLADLVDR++V IRKWK +VK + KENN
Sbjct: 437 KWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEIRKWKWKVKAVKKENN 496
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
ERHSQRC+IELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF+E
Sbjct: 497 ERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSE 556
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
GRPLGKSGL WLKIHLANLYAGGVDKL Y+ R+ FTENHLDD+FDSADRPLEG+RWWL+A
Sbjct: 557 GRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFDSADRPLEGKRWWLQA 616
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
EDP QCLAAC NLSEALRSPTPETTISH+PVH DGSCNGLQHYAALGRDK G
Sbjct: 617 EDPFQCLAACTNLSEALRSPTPETTISHMPVHQDGSCNGLQHYAALGRDKNG 668
>B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_580715 PE=3 SV=1
Length = 543
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/527 (75%), Positives = 457/527 (86%), Gaps = 1/527 (0%)
Query: 464 LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIR 523
E IF+ALD+LGNT+WR+N+R+L V+ +IW++GG LADLVD DV ++
Sbjct: 18 FELIFQALDTLGNTRWRVNKRVLSVVDRIWSNGGCLADLVDHSDVPLPEKPETEDEALLK 77
Query: 524 KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNH 583
KWK +++ + KEN ERH+QRC+IELKLAVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNH
Sbjct: 78 KWKWKLRGVKKENKERHAQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNH 137
Query: 584 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDS 643
LGSDLCRGILEFAEGRPLGKSGLRWLKIH+ANL+AGGVDKL YE R+AFTENHLDD+FD
Sbjct: 138 LGSDLCRGILEFAEGRPLGKSGLRWLKIHIANLFAGGVDKLSYEGRIAFTENHLDDIFDC 197
Query: 644 ADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAAL 703
D+PL+G+RWWL AEDP Q LA CINL+EALRS +PET ISH+PVH DGSCNGLQHYAAL
Sbjct: 198 TDKPLDGKRWWLHAEDPFQFLAVCINLTEALRSSSPETYISHIPVHQDGSCNGLQHYAAL 257
Query: 704 GRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRK 763
GRDKLGAAAVNLV G++PADVYSGIA+RVL+IMR+DA+KDP+ QVDRK
Sbjct: 258 GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPDVFPDALRAKELINQVDRK 317
Query: 764 LVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAA 823
LVKQTVMTSVYGVTY+GARDQIKRRLKER I ++S++F SCYAAK TLTAL EMFEAA
Sbjct: 318 LVKQTVMTSVYGVTYIGARDQIKRRLKER-GITEESDIFGCSCYAAKVTLTALGEMFEAA 376
Query: 824 RSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVL 883
RSIM+WL DCAK+IAS NEPVRWTTP+GLP VQPYR++G IKTSLQVL L++ETDKV+
Sbjct: 377 RSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKLGTRSIKTSLQVLILQKETDKVM 436
Query: 884 VKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
V+RQ TAFPPNFVHSLD SHMMMTAVACK AGL+FAGVHDSYWTHACDVDEMNRILREKF
Sbjct: 437 VQRQRTAFPPNFVHSLDSSHMMMTAVACKGAGLNFAGVHDSYWTHACDVDEMNRILREKF 496
Query: 944 VELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
VELYE PILENLLESF+KSFP L+FPPLP+RGDF+LREVL S YFFN
Sbjct: 497 VELYETPILENLLESFEKSFPTLSFPPLPDRGDFELREVLESPYFFN 543
>M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloroplastic
OS=Triticum urartu GN=TRIUR3_09671 PE=4 SV=1
Length = 921
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/792 (51%), Positives = 535/792 (67%), Gaps = 59/792 (7%)
Query: 182 PLKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
PL+ A+ +Q+V ++ K +A Y LPA+K+AVI MHK+MGLLM++ +G G RV+
Sbjct: 145 PLRDAVARDQDVQRRKRVKHVYAKYLLLLPAEKVAVIVMHKMMGLLMSSKDGCGSVRVVQ 204
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
AA IGEA+E E ++ F + +D
Sbjct: 205 AAHSIGEAVEREYKVQAF---------------------FQKTRRKTRSKTDSENDPALN 243
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSP 361
SL++++K+ + +++ + + WG EA+ KV
Sbjct: 244 KEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKV----------------- 286
Query: 362 VSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPM 421
PD P T + ++ +++ +IECDPLV +G E +A+++ IPYLPM
Sbjct: 287 ------CFPDSIPTI--TEFCLICYGRRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 338
Query: 422 LVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRI 481
LVPP W YDKG +LFLPSYVMRTHG K Q EA+K P QL +FEALD LG TKWR+
Sbjct: 339 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 398
Query: 482 NQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHS 541
N+R+ DV+ IW+ GG +A LVD+ ++ I+KWK VK K N E H+
Sbjct: 399 NRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHA 458
Query: 542 QRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPL 601
+RC+ ELKL+VARKM+EE GFYYPHN+DFRGRAYPMHP+L+HLGSDLCRG+LE+AEGRPL
Sbjct: 459 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 518
Query: 602 GKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPL 661
GKSGLRWLKIHLAN Y GG++KL +ES++AF E+HL D+FDSA P++G WW+ AEDP
Sbjct: 519 GKSGLRWLKIHLANKYGGGIEKLSHESKLAFVEDHLPDIFDSASNPVDGNCWWINAEDPF 578
Query: 662 QCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRP 721
QCLAAC++LS+AL SP+P +SH+P+H DGSCNGLQHYAALGRD +GAAAVNLV G++P
Sbjct: 579 QCLAACMDLSKALESPSPHDAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 638
Query: 722 ADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGA 781
AD+YS IA+RVL+++R+D+ KDP T+ +VDRKLVKQTVMTSVYGVT++GA
Sbjct: 639 ADIYSEIAARVLDVVREDSMKDPATDPSVSLAKVLVDEVDRKLVKQTVMTSVYGVTFIGA 698
Query: 782 RDQIKRRLKERCAIEDDSELFSASCYAA-------------KTTLTALEEMFEAARSIMS 828
R QIK+RL+E+ I DD L+ SCYA K TL AL +MF++AR+IM+
Sbjct: 699 RQQIKKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSARAIMA 758
Query: 829 WLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQS 888
WL +CAK+IAS N+PVRWT+P+GLP VQPY++ +I+TSLQ L+LRRE D + +RQ
Sbjct: 759 WLGECAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQK 818
Query: 889 TAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYE 948
AFPPNFVHSLD SHMMMTA+ CK+AGL FAGVHDS+W HACDVD+MN+ILRE+FVELY
Sbjct: 819 AAFPPNFVHSLDSSHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYS 878
Query: 949 APILENLLESFQ 960
PILEN L+ Q
Sbjct: 879 MPILENDLKFSQ 890
>M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401001383 PE=4 SV=1
Length = 672
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/661 (61%), Positives = 492/661 (74%), Gaps = 33/661 (4%)
Query: 83 RGYASVAEAI-VSSSDTEEDCS--GGANEVKQMVKKEVKGKPLLDRKA---------KYK 130
+ YASVAEA+ VSS+D EED S G E+ +KKE K + R+ + K
Sbjct: 33 KSYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLTSGIDRRK 92
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
L++RQVK+ET+AWE AAKEY+ELL D+CEQKL PNLPY+KSLFLGWFEPL+ I E
Sbjct: 93 YPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQE 152
Query: 191 QEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAI 250
QE+C + K ++ YF+ LPAD MAVITMHKLMGLLMT G ARV+ AAL IG+AI
Sbjct: 153 QELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEH-GNARVVQAALTIGDAI 211
Query: 251 ENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXX 310
E E RI E DGE HA +E KL
Sbjct: 212 EQEVRIHKFLEKTEKHKAEKDRKME--DGE--HATLEQKKLH----------------KK 251
Query: 311 XSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPP 370
+SL+K+QK++ V I++ DD KPWGQ+A+AKVG R+++ L++TAYIQSP QL PP
Sbjct: 252 VTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPP 311
Query: 371 DIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTR 430
DIRPAF H+ +T +++ RRYG+I+CD LV KGLE++A++MVIPY+PMLVPP WT
Sbjct: 312 DIRPAFIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTG 371
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
YDKG +L+LPSYVMRTHGA+QQ EAVKRA NQL P+FEALD+LG+TKWRIN+R+L V+
Sbjct: 372 YDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVD 431
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
+IW GGRLADLVDRDD KW+ +VK++ KEN ERHSQRC+IELKL
Sbjct: 432 RIWAGGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKL 491
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
AVA +MK+E+GF+YPHNVDFRGRAYPMHP+LNHLGSD+CRG+LEFA GRPLG+SGLRWLK
Sbjct: 492 AVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLK 551
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
IHLANL+AGGVDKL + R+AFTE+HLDD+FDSAD+PLEGRRWWL AEDP QCLA CINL
Sbjct: 552 IHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINL 611
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
SEA+RS +PET ISH+PVH DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA+
Sbjct: 612 SEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 671
Query: 731 R 731
R
Sbjct: 672 R 672
>M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 777
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/609 (64%), Positives = 478/609 (78%), Gaps = 23/609 (3%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
LR+RQ+++ETEAWE+AAKEY+ELL D+CE KL PNLPY+KSLFLGWFEPL+ I+AEQE+
Sbjct: 165 LRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQEL 224
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
+ + +HAPYFN LPAD MAVITMHKLMGLLMT +G G RVI AA QIGEA+E+E
Sbjct: 225 VGERGTRASHAPYFNMLPADMMAVITMHKLMGLLMTG-SGDGSVRVIQAACQIGEAVEHE 283
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEP-DGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXS 312
RI EP D + A E L +
Sbjct: 284 VRIHKFLEKTKKKNTKEVDKVVEPGDSDI---AKEQQLLR----------------KKVT 324
Query: 313 SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI 372
L+K+QK++QV ++K D +PWGQ+A AKVG R+++L IETA+IQ P SQ G S P+I
Sbjct: 325 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEI 384
Query: 373 RPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYD 432
RPAF H +T +A QK RRYG+I+CDPLV +GL+++AK+MVIPY+PML+PP NWT YD
Sbjct: 385 RPAFTHEMRT-VAREQKS-RRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYD 442
Query: 433 KGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQI 492
KGA+LFLPSYVMRTHGA+QQ EAVK+AP Q++ IFEALD+LG+TKWR+N+R+L ++ +I
Sbjct: 443 KGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRI 502
Query: 493 WTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
W+SGGRLADLVDR DV ++KW+ +++ KEN+ERHSQRC++ELKLAV
Sbjct: 503 WSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAV 562
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
ARKMKEE GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIH
Sbjct: 563 ARKMKEEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIH 622
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
LANLY GGVDKL Y+ R+AFTENHL+D+FDSA+RPLEG+RWWLEAEDP QCLA C++L+E
Sbjct: 623 LANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNE 682
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
ALRS +PET ISH+PVH DGSCNGLQHYAALGRDKLGA AVNLV G++PADVYSGIA+RV
Sbjct: 683 ALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARV 742
Query: 733 LEIMRKDAE 741
+EIM++DA+
Sbjct: 743 VEIMKRDAQ 751
>B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_925854 PE=4 SV=1
Length = 528
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/560 (68%), Positives = 450/560 (80%), Gaps = 32/560 (5%)
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
YDKGA+LFLPSYVMR HGAKQQ EAVKRAP QL+ +FEALD+LGNT+WR+N+R+L V+
Sbjct: 1 YDKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLQAVFEALDTLGNTRWRVNKRVLSVVD 60
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
+IW++GG LADLVD DV ++KWK +++ + KEN ERH+QRC+IELKL
Sbjct: 61 RIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWKWKLRGVKKENKERHAQRCDIELKL 120
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
AVARKMK+E+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK
Sbjct: 121 AVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 180
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
IH+ANL+AGGVDKL YE R+AFTENHLDD+FDSAD+PL+G+RWWL AEDP Q LA CINL
Sbjct: 181 IHIANLFAGGVDKLSYEGRIAFTENHLDDIFDSADKPLDGKRWWLHAEDPFQFLAVCINL 240
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
+EALRS +PET ISH+PVH DGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIA+
Sbjct: 241 TEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 300
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
R+ M V + V+ ++ S ++ ++ I +
Sbjct: 301 RLFNYM----------------------CVCVEWVRAQIIISYKNFFHM--KNVISQ--- 333
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
A + +LF + + + TLTAL EMFEAARSIM+WL DCAK+IAS NEPVRWTTP+
Sbjct: 334 ---ASKGGIKLFELAWF--QVTLTALGEMFEAARSIMNWLGDCAKIIASENEPVRWTTPL 388
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVA 910
GLP VQPYR++G IKTSLQVL L++ETDKV+V+RQ TAF PNFVHSLD SHMMMTAVA
Sbjct: 389 GLPVVQPYRKLGTRSIKTSLQVLILQKETDKVMVQRQRTAFSPNFVHSLDSSHMMMTAVA 448
Query: 911 CKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPP 970
CK AGL+FAGVHDSYWTHACDVDEMNRILREKFVELYE PILENLLESF+KSFP L+FPP
Sbjct: 449 CKGAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPP 508
Query: 971 LPERGDFDLREVLNSQYFFN 990
LP+RGDF+LREVL S YFFN
Sbjct: 509 LPDRGDFELREVLESPYFFN 528
>I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 547
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/547 (66%), Positives = 433/547 (79%)
Query: 444 MRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLV 503
MRTHG+++Q + +K Q++ +FE LD LGNTKWR+N+R+L V+ IW GG +A LV
Sbjct: 1 MRTHGSRKQQDVMKNVNGAQMQKVFETLDILGNTKWRVNRRMLGVVESIWAGGGNIAGLV 60
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D DV I++WK V+ K N ERHS RC+ ELKL+VARKMK+E+GFY
Sbjct: 61 DCKDVPKPDKPPVEDLKLIQEWKCSVRKAKKINLERHSLRCDTELKLSVARKMKDEEGFY 120
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
YPHN+DFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++K
Sbjct: 121 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 180
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
Y+ R+ F E+H+ D+FDSAD P+ G RWWL AEDP QCLAACINLSEALRS +P + I
Sbjct: 181 HSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSSSPNSFI 240
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH+P+H DGSCNGLQHYAALGRD L AAAVNLV ++PADVY+ IA RV +IMR+D+ KD
Sbjct: 241 SHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAKEKPADVYTEIAVRVYDIMRRDSNKD 300
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFS 803
P+T Q+DRKLVKQTVMTSVYGVTY+GAR+QIKRRL E+ I DD L++
Sbjct: 301 PDTFPNALLAKVLLGQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGLITDDRLLYA 360
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGR 863
ASCYAAK TL AL E+FEAAR IM WL DCAKVIA N+ VRWTTP+GLP VQPY + R
Sbjct: 361 ASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVIACENQAVRWTTPLGLPVVQPYCKTER 420
Query: 864 SIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHD 923
I+TSLQ+L+L+RE V VK+Q +AFPPNFVHSLD SHMMMTA+AC AGL FAGVHD
Sbjct: 421 YQIRTSLQLLALQREGSAVSVKKQRSAFPPNFVHSLDSSHMMMTALACNDAGLCFAGVHD 480
Query: 924 SYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVL 983
S+WTH CDV++MN+ILREKFVELY PILENLLE FQ ++P L FPPLP+RGDFDL++VL
Sbjct: 481 SFWTHPCDVEKMNQILREKFVELYNMPILENLLEGFQTTYPGLAFPPLPKRGDFDLQKVL 540
Query: 984 NSQYFFN 990
+S YFFN
Sbjct: 541 DSPYFFN 547
>Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=At2g24120 PE=2 SV=1
Length = 786
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/659 (54%), Positives = 468/659 (71%), Gaps = 31/659 (4%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI 187
K K LR+RQVK ETEAWE EY++L +++CE+ L PNLPY+K +FLGWF+PLK I
Sbjct: 156 KRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVI 215
Query: 188 VAEQEVCKKSHRKM--THAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
EQ++ K +K+ +AP+ LPADKMAVI MHK+MGL+M+ H GC +V+ AA+
Sbjct: 216 EREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVS 274
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
IG AIE E RI H ++ + ++
Sbjct: 275 IGIAIEQEVRI--------------------------HNFLKRTRKNNAGDSQEELKEKQ 308
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
+SLI+++++ + ++K + KPWG+ +AK+G R+++LLIE AY+Q P++Q
Sbjct: 309 LLRKRVNSLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQS 367
Query: 366 GGSPPDIRPAFKHTFKTAMA-DSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPYLPMLVP 424
G S P+ RPAF+H FKT K +RRYG+IECD L+ GL+KSAK+M+IPY+PMLVP
Sbjct: 368 GDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVP 427
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQR 484
P W YDKG YLFLPSY+MRTHG+K+Q +A+K + +FEALD+LGNTKWR+N+
Sbjct: 428 PKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRN 487
Query: 485 LLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRC 544
+LDV+ ++W GG +A LV+R+DV ++ WK + K N ERHS RC
Sbjct: 488 ILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRC 547
Query: 545 EIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 604
++ELKL+VARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPLGKS
Sbjct: 548 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKS 607
Query: 605 GLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCL 664
GL WLKIHLANLYAGGV+KL +++R+AF ENHLDD+ DSA+ P+ G+RWWL+AEDP QCL
Sbjct: 608 GLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCL 667
Query: 665 AACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AAC+ L++AL+SP+P + ISH+P+H DGSCNGLQHYAALGRD AAAVNLV G++PADV
Sbjct: 668 AACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADV 727
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARD 783
YS I+ RV EIM+KD+ KDPE+N QVDRKLVKQTVMTSVYGVTYVGAR+
Sbjct: 728 YSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGARE 786
>M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011152 PE=3 SV=1
Length = 471
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/469 (73%), Positives = 401/469 (85%)
Query: 522 IRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYL 581
+++WK +V+ K N E HSQRC+ ELKL+VARK+K+E+GFYYPHN+DFRGRAYPMHP+L
Sbjct: 3 LKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHL 62
Query: 582 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVF 641
NHL SDLCRGILEFAEGRPLGKSGLRWLK+HLA+LYAGG++KLCY++R+AF ENH+DD+
Sbjct: 63 NHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDIL 122
Query: 642 DSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYA 701
DSA PL G RWWL AEDPLQCLAACINLSEAL+SP+P T ISH+P+H DGSCNGLQHYA
Sbjct: 123 DSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYA 182
Query: 702 ALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVD 761
ALGRD + AAAVNLV G++PADVY+ IA RV I+R D+ KDP T+ QVD
Sbjct: 183 ALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVD 242
Query: 762 RKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFE 821
RKLVKQTVMTSVYGVTYVGAR+QIKRRL+E+ I+DD LF+ASCYAAK TL AL E+F+
Sbjct: 243 RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQ 302
Query: 822 AARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK 881
AAR M+WL DCAKVIAS N+PVRWTTP+GLP VQPY + R +I+TSLQVL+L+RE D
Sbjct: 303 AARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDA 362
Query: 882 VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILRE 941
V V++Q TAFPPNFVHSLDGSHMMMTAVAC+ AGL FAGVHDS+WTHACDVD+MNRILRE
Sbjct: 363 VEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILRE 422
Query: 942 KFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
KFVELY PILE+LLESFQ+S+P L FPPLP+RGDFDL+EVL S YFFN
Sbjct: 423 KFVELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLQEVLESPYFFN 471
>D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleria gruberi
GN=NAEGRDRAFT_81702 PE=3 SV=1
Length = 933
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/875 (39%), Positives = 505/875 (57%), Gaps = 92/875 (10%)
Query: 137 RQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK- 195
+Q ++ET + + A Y++ L+ + LP K + L W+EPL I +Q+
Sbjct: 130 KQKELETRSMDIAKARYRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNF 189
Query: 196 ---------------KSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVI 240
S Y + A+K+A+IT+H+L+ + G + +
Sbjct: 190 SCSKKKSSSTNTTTTTSQDNFAIPLYLTSISAEKLAIITLHELLASCLKERGGSPVSSI- 248
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
+ QIG+AI+ E + ++ I+N +
Sbjct: 249 --SYQIGDAIQAEINVEKLKRT-----------------NYFKLIIKNQMI--------- 280
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQS 360
++ K K++ L+++ + +E ++G ++QL + TA++
Sbjct: 281 ----------YHNINKISKLK--------LNEYVTFTKEELVQLGSYLIQLALSTAHVP- 321
Query: 361 PVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDP--LVTKGLEKSAKNMVIP- 417
L +P + PAF H T ++ + G++E D L G E A+ ++ P
Sbjct: 322 ----LISNPKETVPAFIHRNIT------RNSKIIGVVEPDDNLLHLIGREHVAQEILYPN 371
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNT 477
+LPMLVPPN WT G Y+ L +MRT G+ Q +K A N L L++L T
Sbjct: 372 HLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSAELNDL---LSGLNTLNET 428
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
+WRIN + + + ++W SGG L +L R D +KWKR V+ I N
Sbjct: 429 RWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPEIKKKWKRTVEKIKTHNR 488
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
HS RC++ LKL VA K+ FY+PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F +
Sbjct: 489 NLHSLRCDMLLKLKVAEDFKDNT-FYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEK 547
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
G P+GK G+ WLKIHLANLY G DKL ++ RV F + +++++ DSAD+PLEG RWWL++
Sbjct: 548 GMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKS 605
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
E+P Q LAAC+ L+E LRSP PE +SH+P+ MDGSCNGLQHYAALGRD LGA VNL+
Sbjct: 606 ENPWQTLAACVELAECLRSPNPEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVNLLP 665
Query: 718 GDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
+P DVY G VLE+++K E+D + + V R +KQTVMTSVYGVT
Sbjct: 666 TSKPMDVYVG----VLEVVKKHIERDMKAGN--KLAKLLHGNVYRSTIKQTVMTSVYGVT 719
Query: 778 YVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
+VGAR+QI++RLKE+ + +D ++F+ + Y A TL +L E+F +A++IM WL DCA +I
Sbjct: 720 FVGAREQIQKRLKEKKEVPED-DVFACASYLASITLKSLGEVFSSAQNIMEWLNDCALLI 778
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK--RQSTAFPPNF 895
+S++ PV W TP+GLP +QPYR I+KT +Q ++L +DK+ V RQ +AFPPN+
Sbjct: 779 SSSDTPVSWITPLGLPVIQPYRSKRSKIVKTVMQSITLADSSDKLPVSRTRQKSAFPPNY 838
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
VHSLD SHM MTA AC+K G++FA VHDS+W +A +VD MN I+RE+F+ L+ P+LE L
Sbjct: 839 VHSLDSSHMFMTASACQKEGIEFAAVHDSFWCNAGNVDRMNTIIREQFINLHSQPLLEEL 898
Query: 956 LESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+F +P++ FPPLP++G DL VL++ YFF+
Sbjct: 899 NATFTNLYPQIQFPPLPKKGSLDLTRVLDAPYFFD 933
>K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoccus prasinos
GN=Bathy10g00540 PE=3 SV=1
Length = 1109
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 355/945 (37%), Positives = 503/945 (53%), Gaps = 93/945 (9%)
Query: 135 RKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVC 194
R+RQ ++E E+ + K Y+E+ E + + NLP ++ L ++EPL + EQ +
Sbjct: 169 RERQRRVENESVNDEIKRYREMSEQMAQVGAGANLPAVRQLLTSFYEPLMVGVEREQNMI 228
Query: 195 KKS---HRKMTHAPYFNDLPADKMAVITMHKLMGLLMTN---------------HNGIGC 236
+ + + PY L ADK+AVI++H ++ +LM H G
Sbjct: 229 SEGVPGFDRRVYGPYLQLLGADKIAVISLHTIISMLMRGVEKTRGDVFRDHSREHGEAGS 288
Query: 237 ARVIHAALQIGEAIENE---ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHA--AIENGKL 291
+ + A +G IE E +R+ E+ F A EN +
Sbjct: 289 VKFVRLASSLGRVIEAEVNLSRLQTREKLLSARYRAGLINMEDIVETFNQERHAGENEMI 348
Query: 292 SDXXXXXXXXXXXXXXXXXXSSLIKQ-------------QKMQQVMGII----KGLDDWK 334
++ +LIK+ +K++ V + K LD+
Sbjct: 349 AEREREEKIANIDREIRE--KNLIKESDIRSTMLQRDSTKKLKSVRAVSEQAKKALDN-A 405
Query: 335 PWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-PAFKHTFK------TAMADS 387
WG KVG ++ ++++ I+ P + + I PAF H +
Sbjct: 406 DWGSVLHLKVGAAIIAIVLDVCKIKVPGPETAETGEKIEVPAFYHDYSLEPNAYQGWKQK 465
Query: 388 QKDIRRYGIIECDP----LVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYV 443
R G + V A++ + + PM+VPP W Y+KG YL S V
Sbjct: 466 ASPNNRSGTVHWHDSFFRFVHSATLARARSAITRHKPMIVPPRPWESYNKGGYLNSNSVV 525
Query: 444 MRTH----GAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS---- 495
MR + G + + + +F AL+ LG+T W IN +L+VI Q+W
Sbjct: 526 MRGNYSRDGPSDGQMKLLAERVGEYDNVFGALNVLGSTAWVINTDILEVIEQVWREKKYA 585
Query: 496 ---GGRLADLVDRDDVXX-----------------XXXXXXXXXXXIRKWKRQVKTIMKE 535
GG +A++ R ++ + ++ R +
Sbjct: 586 GGFGGGIANIPPRAELNLPNWPSSEFRLRRERNGPLYATALPSSREVGEFMRAFNRAKQT 645
Query: 536 NNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEF 595
N E HSQRC+ +KL VAR+MK E+ Y+PHNVDFRGRAY MH +LNH+GSD CRG L+F
Sbjct: 646 NRELHSQRCDFAIKLQVAREMKNEERIYFPHNVDFRGRAYTMHAHLNHIGSDFCRGTLKF 705
Query: 596 AEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPL--EGRRW 653
A+ +PLG++GL WL I ANLY GG DKL RV F++ +L+ + SA+ PL EG W
Sbjct: 706 ADAKPLGENGLDWLFIQCANLYGGGADKLPLHQRVEFSKLNLEKIKKSAEDPLGPEG-SW 764
Query: 654 WLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAV 713
W +A+DP QCLA C+ + +A+ S P + ++PVH DGSCNGLQHYAALGRD G AV
Sbjct: 765 WQDADDPWQCLATCMEIIKAINSKDPAKYMCNLPVHQDGSCNGLQHYAALGRDFAGGRAV 824
Query: 714 NLVRGDRPADVYSGIASRVLEIMRKDAE----KDPETNSXXXXXXXXXXQVDRKLVKQTV 769
NLV DR ADVY+GIA+ + +I++KD E KD E+ QVDRKLVKQTV
Sbjct: 825 NLVPADRGADVYTGIANVLRDIVQKDIENCDYKDEESVERMKLAKLLIDQVDRKLVKQTV 884
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MTSVYGVT+VGAR QI RLKER E +S + + YAAK TL AL +MF+ AR +M W
Sbjct: 885 MTSVYGVTFVGARMQISARLKERVGFESESVRYRVAAYAAKRTLDALNDMFQNAREVMGW 944
Query: 830 LADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK--RQ 887
L CA V+ N PV+WTTP+GLP +QPYR + ++T LQ LR E +K V +Q
Sbjct: 945 LTHCASVVTKVNAPVQWTTPLGLPVLQPYRNQTQKSVRTLLQTFVLRSEDEKQKVNKSKQ 1004
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+AFPPN++HS+D +HMMMTA+ C +A + FAGVHDS+WTHA DV M+RILREKF+EL+
Sbjct: 1005 RSAFPPNYIHSIDSTHMMMTALECSRANITFAGVHDSFWTHAGDVPVMSRILREKFIELH 1064
Query: 948 EAPILENLLESFQKSFPKL--NFPPLPERGDFDLREVLNSQYFFN 990
E P+L+NL E + ++P++ F P PE GD D+ V +S YFF+
Sbjct: 1065 ETPLLDNLYEELKSTYPEVAGEFLPPPEYGDLDIETVRDSAYFFS 1109
>A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_34669 PE=3 SV=1
Length = 922
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/895 (39%), Positives = 487/895 (54%), Gaps = 75/895 (8%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
++Q + E A E Y+EL + LP ++ L ++ PL A+ EQE +
Sbjct: 63 RKQREAENLAVEREVMRYKELARKTFAAGIGAQLPVVQKLLASFYVPLVEALTEEQEKIR 122
Query: 196 KSH---RKMTHAPYFNDLPADKMAVITMHKLMGLLMT-NHNGIGCARVIHAALQIGEAIE 251
+ + + Y L DK+AV+T+H + LM + G A+ I A Q+G A++
Sbjct: 123 GNVPGVDRRVYGHYLGLLEPDKLAVLTLHATLSTLMKGDGRNNGAAKFISVADQVGSAVQ 182
Query: 252 NEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXX 311
E + AA E + S
Sbjct: 183 AEVNLERMRSAEK-------------------AAKEAFRRSRLVNTEGNVKEIDDAAEHR 223
Query: 312 SSL-IKQQKMQQVMGIIK----GLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG 366
+L + KM + + K L++ + WG+E R K+G ++ L+ TA I P +
Sbjct: 224 INLALDTSKMNTIKSVSKHARQALENAE-WGREIRLKIGTVLLTALMNTAKIGVPDEK-- 280
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAKNMVIP--YLPML 422
G + PAF H +K A YG++ + + + E + ++P + PM+
Sbjct: 281 GELLTL-PAFYHDYKEAG---------YGMLHWHDSIYRFINTETMTRAALVPVRHFPMV 330
Query: 423 VPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLE----------------P 466
+PP W RY+KG YL + MR K E RA LE P
Sbjct: 331 IPPRYWERYNKGGYLRADNLCMR---GKYSNEGPSRAQIAALEEKAREADASGEPVQYQP 387
Query: 467 IFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXX--XXXXXXXXXIRK 524
+ +AL++LG T W+IN +L ++ ++W GG +A++ R ++ +
Sbjct: 388 VLDALNALGQTAWQINTDVLPIVEEVWARGGGVAEVPLRAELQLPRWPGGGLPGKGEVID 447
Query: 525 WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHL 584
+ + V+ K N E HSQRC+ +KL VAR+MK E Y+PHN+DFRGRAY MH +LNH+
Sbjct: 448 FLQSVRKTKKSNMELHSQRCDFLIKLQVAREMKNEPNIYFPHNLDFRGRAYTMHVHLNHI 507
Query: 585 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSA 644
GSDLCRG+L F E +PLG+ GLRW+ I A L+ G DKL + RV F ++ ++DV SA
Sbjct: 508 GSDLCRGLLRFNEKKPLGERGLRWMHIQCATLFGNGADKLPMDERVQFIKDRIEDVRASA 567
Query: 645 DRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALG 704
PL WW EAE+P QCLA CI L +AL P +S++PVH DGSCNGLQHYAALG
Sbjct: 568 QDPLAKDAWWQEAEEPWQCLATCIELDKALELSDPTQFMSNLPVHQDGSCNGLQHYAALG 627
Query: 705 RDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAE----KDPETNSXXXXXXXXXXQV 760
RD G AVNLV DR ADVY+GIA+ + I+ +D + +D E + +
Sbjct: 628 RDLHGGEAVNLVPADRGADVYTGIANVLKRIVAEDIKLIDSEDEEDVNNAKLAMSLAQHI 687
Query: 761 DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL-FSASCYAAKTTLTALEEM 819
DRKLVKQTVMTSVYGVT++GAR QI RL+ER A+ED+ L + S YAAK TL AL M
Sbjct: 688 DRKLVKQTVMTSVYGVTFIGARAQIYSRLREREAMEDNELLRYRVSNYAAKRTLDALNNM 747
Query: 820 FEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--R 877
F AR +M WL CA + S EPVRWTTP+GLP VQPY ++T LQ SL+
Sbjct: 748 FSNARDVMGWLTTCATIATSAGEPVRWTTPLGLPVVQPYHSQRTKRVRTILQSFSLKVHD 807
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
E V+ +Q +AFPPN++HS+D SHMM TA+AC AGL FAGVHDS+WTHA DVD MN
Sbjct: 808 EQQPVMKVKQRSAFPPNYIHSIDSSHMMRTAIACVDAGLTFAGVHDSFWTHATDVDTMNV 867
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKL--NFPPLPERGDFDLREVLNSQYFFN 990
ILREKF+E+++ P+LENL F+ ++P + FP P GD DL V +S YFF+
Sbjct: 868 ILREKFIEVHKEPLLENLYHEFRANYPDVADEFPQPPAPGDLDLDVVQDSVYFFS 922
>Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleria sp. TES-2005
PE=3 SV=1
Length = 968
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/670 (44%), Positives = 431/670 (64%), Gaps = 37/670 (5%)
Query: 330 LDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQK 389
L+++ + +E ++G ++QL ++TA + L +P + PAF H K
Sbjct: 327 LNEYVSFSKEELIRLGSYLIQLTLDTAKVP-----LVDNPKESVPAFIH----------K 371
Query: 390 DIRR----YGIIECDPLVTK--GLEKSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSY 442
++ R G+IE D + + G E + ++ P +LPMLVPPN WT G Y+ L
Sbjct: 372 NVSRAGKVIGMIEPDENLIQLVGREHLTQEILFPNHLPMLVPPNPWTSSVSGGYIALKVM 431
Query: 443 VMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL 502
+MRT G+ Q +K A +L + L++L +KW +N ++ + + ++W GG L +L
Sbjct: 432 IMRTRGSHLQSYILKSA---ELTDLLSGLNTLNESKWIVNPKVYETVLRVWNEGGGLGEL 488
Query: 503 VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGF 562
R D +KWKR + I + N HS RC++ LKL VA K+ F
Sbjct: 489 PSRFDDALPEEPETDDPEVKKKWKRTCEKIKQHNRNLHSLRCDMLLKLKVAEDFKDN-AF 547
Query: 563 YYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 622
Y+PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F +G P+GK G+ WLKIHLANLY G D
Sbjct: 548 YFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLY--GKD 605
Query: 623 KLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETT 682
KL ++ RV F + ++ +VFDSAD PL+G RWWL++E+P Q LAAC+ L+ LRS PE
Sbjct: 606 KLPFDERVQFIDQNMAEVFDSADVPLDGNRWWLQSENPWQTLAACVELTNCLRSEKPEEY 665
Query: 683 ISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK 742
IS++P+ MDGSCNGLQHYAALGRD LGA VNL+ +P DVY G VLE+++K E+
Sbjct: 666 ISNLPIQMDGSCNGLQHYAALGRDNLGALHVNLLPTSKPMDVYVG----VLEVVKKHIER 721
Query: 743 DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELF 802
D + + V R +KQTVMTSVYGVT+VGAR+QI++RLKE+ + +D ++F
Sbjct: 722 DMKAGN--KLAKLLHGNVYRSTIKQTVMTSVYGVTFVGAREQIQKRLKEKKEVPED-DVF 778
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIG 862
+ + Y A TL +L E+F +A++IM WL DCA +I+S++ PV W TP+GLP +QPYR
Sbjct: 779 ACASYLASITLKSLGEVFSSAQNIMEWLNDCALLISSSDTPVSWITPLGLPVIQPYRSKR 838
Query: 863 RSIIKTSLQVLSLRRETDKVLVK--RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
I+KT +Q ++L +DK+ V RQ +AFPPN+VHSLD SHM MTA AC K G++FA
Sbjct: 839 TKIVKTVMQSVTLFDSSDKLPVSKTRQKSAFPPNYVHSLDSSHMFMTATACHKEGIEFAA 898
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLR 980
VHDS+W +A +VD MN+I+RE+F+ L+ P+LE L +F + +P + FPPLP++G DL
Sbjct: 899 VHDSFWCNAGNVDRMNKIIREQFINLHSQPLLEELYATFTRLYPNIQFPPLPKKGTLDLN 958
Query: 981 EVLNSQYFFN 990
VL++ YFF+
Sbjct: 959 RVLDAPYFFD 968
>L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_101460 PE=3 SV=1
Length = 965
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 348/904 (38%), Positives = 498/904 (55%), Gaps = 113/904 (12%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
L + + ET++ E+A + Y+++ + + + L L + WFEPL +AI AEQ
Sbjct: 126 LENLEYEWETKSVEKAVERYKKISKSLKQLGLAFELLQGNQILGHWFEPLCAAIRAEQNA 185
Query: 194 C-------------KKSHRKMTHA------PYFNDLPADKMAVITMHKLMGLLMTNHNGI 234
K +K A Y +P +K+AVIT+H+ M ++ +H+
Sbjct: 186 ALLKTSAADAAASPTKGKKKTQKAEDRELSAYLVTIPPEKLAVITIHETMCEILKSHHPE 245
Query: 235 GCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDX 294
G A + +G A+E E E E + + N
Sbjct: 246 G-APFAALVVAVGRAVEYEYNC------------------ERLAKEGWKPQLRN------ 280
Query: 295 XXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIE 354
SLI+ Q Q +D WG AK+G ++Q L+
Sbjct: 281 -------RSATPTKQQICSLIRTQSRAQ-------FED-ASWGAALHAKIGSLLVQQLLG 325
Query: 355 TAYI-------------QSPVSQLGGSPPDIRPAF----KHTFKTAMADSQKDIRR--YG 395
TA I SP L G+P RPAF + + A Q +R G
Sbjct: 326 TATIARKAEEADVAAAQSSPARLLSGAPRK-RPAFVTKEEALLEPAFNHHQAMLRGKLTG 384
Query: 396 IIECDPLVTKGLEKSAKN---MVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
+ C V +E M Y+PMLV P W ++G YL + V+R G++ Q
Sbjct: 385 FLGCHEQVLALMEHEEVQRGVMQARYMPMLVEPQPWVAPNQGGYLVARTQVLRAKGSRMQ 444
Query: 453 CEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXX 512
E ++ A ++ ++E L+ L +T WRIN R+ +VI + W +GG +ADL R ++
Sbjct: 445 TEVLRSA---SMDKVYECLNLLSSTPWRINNRMHEVICEAWDNGGGIADLPSRTNLPELE 501
Query: 513 --XXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDF 570
+K+ R+ K N HS RC++ K +++ FYYPHN+DF
Sbjct: 502 PPADYYSDLEVKQKFDRERKKAKIANYNLHSLRCDVA-------KECQDRTFYYPHNMDF 554
Query: 571 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRV 630
RGR YP+ P+LNHLG DLCRG+L FAEG+PLG+ LK+HLAN++ G DK+ +E RV
Sbjct: 555 RGRTYPIPPHLNHLGQDLCRGLLTFAEGKPLGE-----LKVHLANVF--GNDKITFEDRV 607
Query: 631 AFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHM 690
F EN+++ + DSA PL G+RWWL+A+ P QCLAA I L A S PET +S +P+H
Sbjct: 608 RFVENNMEHIMDSASNPLGGQRWWLKADKPWQCLAASIELINAYNSGQPETYVSTLPIHQ 667
Query: 691 DGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXX 750
DGSCNGLQHYAALG D++GA VNL+ +RP DVYSG+ V+ + DA E
Sbjct: 668 DGSCNGLQHYAALGGDEMGARQVNLLPSERPQDVYSGVVELVVRRLEDDAANGVEI---- 723
Query: 751 XXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAK 810
+VDRK++KQTVMTSVYGVT++GAR QI+ LK++ + DD ++F AS Y A
Sbjct: 724 --AQRLLGKVDRKVIKQTVMTSVYGVTFIGARQQIENALKDKGKVSDD-DMFLASRYLAT 780
Query: 811 TTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSI--IKT 868
+T ++++EMF AR IM+WL+DCA +IA +PV W TP+GLP VQPYR G+ + T
Sbjct: 781 STFSSIKEMFSGAREIMTWLSDCATLIAKQGKPVTWVTPMGLPVVQPYRTKGKQTQTVVT 840
Query: 869 SLQ-VLSLRRETDKVLV--KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSY 925
+LQ V+ ++ E D + V ++Q TAFPPN+VHSLD +HMM+TA+ C +AGL +A VHDSY
Sbjct: 841 ALQNVMLVKEENDSLPVNTRKQRTAFPPNYVHSLDSTHMMLTALQCHEAGLTYASVHDSY 900
Query: 926 WTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNS 985
WTHA VD MN ILR FV+L+ P+L++LL F++++P + FPP+P +GD DL+E++NS
Sbjct: 901 WTHASSVDTMNHILRRTFVDLHSQPLLDDLLAHFKRTYPGIEFPPVPPKGDLDLKEIINS 960
Query: 986 QYFF 989
YFF
Sbjct: 961 PYFF 964
>C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_83775 PE=3 SV=1
Length = 899
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 350/909 (38%), Positives = 495/909 (54%), Gaps = 88/909 (9%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEV 193
L +RQ + E A + + Y+E + LP + L G+F PL SAI EQE
Sbjct: 27 LEERQRRNEILAVDREVERYKEEARITRRRGGGAELPLGRRLLQGFFAPLTSAIRLEQEH 86
Query: 194 CKKSHR---KMTHAPYFNDLPADKMAVITMHKLMGLLMT--------NHNGIGCARVIHA 242
+ R + + P+ L DK+AVIT+H ++ LM N G + + A
Sbjct: 87 VRLKVRGVDRSNYGPFLLMLNPDKLAVITLHTVISQLMKGEQMFGEPNEAQAGMCKFVRA 146
Query: 243 ALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXX 302
+G++++ E + E +G H +
Sbjct: 147 VEMLGQSVQAEVNLARLRQRARLTKKRYL---ESKNGPHVHDRFMKVNME---------- 193
Query: 303 XXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPV 362
SL ++ V + + + WG R+KVG +++LL+ TA I+ P
Sbjct: 194 ----------SLKTLTTVRGVARLARTALNDSDWGGVTRSKVGAALVKLLLTTARIRVPG 243
Query: 363 SQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSA--KNMVIP--Y 418
G ++ PAF H + A RYG+I ++ A + + P Y
Sbjct: 244 PD--GELIEV-PAFYHDYVKHKA------HRYGVISWHDAFFTFMDDEAMIRATLSPVRY 294
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMR---------------THGAKQQCEAVKRAPYNQ 463
+PM+ PP WTR++ G YL S VMR HG + E RA +
Sbjct: 295 MPMVTPPRPWTRFNAGGYLRTESIVMRGHYTTHGPSKRQMLALHGEQSGAELDGRAA--K 352
Query: 464 LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV--------------- 508
+P+ +AL+ LG T WRIN+ +L V+ ++W +GG AD+ R++V
Sbjct: 353 FQPVLDALNVLGRTAWRINEDVLRVMEEVWATGGGRADVPPRENVPDPTWPANPYGLRRS 412
Query: 509 -XXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
+ + + + N E HSQRC+ +KL VA++M++E Y+PHN
Sbjct: 413 RGQLAATALPSRQDVAGFIHSLNRTKQRNRELHSQRCDFLIKLQVAKEMRDEDRIYFPHN 472
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAY MH +LNHLGSD+CRG L FA+ RPLG GL WL I ANLYAGGVDKL +
Sbjct: 473 IDFRGRAYTMHVHLNHLGSDICRGALVFADARPLGNDGLDWLYIQAANLYAGGVDKLPMD 532
Query: 628 SRVAFTENHLDDVFDSADRPL--EGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
R + E+ + + SA PL +G +WL+AEDP QCLA C + A S P +
Sbjct: 533 ERRQWIEDRVHLLEQSARDPLGPDGG-FWLDAEDPWQCLACCFEIERARASGDPPAYMCR 591
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
+PVH DGSCNGLQHYAALGRD+ G VNL+ DRP DVY+GIA+ + I+ +DA K+PE
Sbjct: 592 LPVHQDGSCNGLQHYAALGRDEAGGEQVNLMPRDRPGDVYTGIANVLKRIVAEDA-KNPE 650
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
VDRKLVKQTVMTSVYGVT++GAR QI+ RLKER A+ED++ + +
Sbjct: 651 DPETQALAIALAPHVDRKLVKQTVMTSVYGVTHIGARQQIQNRLKERGAVEDENLRYKMA 710
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSI 865
YAA+ TL AL +F AR +M+WLA+CA+V+ S V WTTP+GLP VQPYR + +
Sbjct: 711 NYAARRTLDALANLFVNARDVMAWLAECARVVCSQGRAVEWTTPLGLPVVQPYRVKSQRM 770
Query: 866 IKTSLQVLSLRRETDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHD 923
I+T +Q +L+ + D+ V +Q +AFPPNF+HS+D +HMM TA+AC +AGL FAGVHD
Sbjct: 771 IRTLVQSFTLQFDNDENSVAKAKQRSAFPPNFIHSIDSAHMMKTALACHEAGLTFAGVHD 830
Query: 924 SYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKL--NFPPLPERGDFDLRE 981
S+WTHA DV EM+R +REKF+EL+ P+LE L E ++ +P++ PP P G+ D+ +
Sbjct: 831 SFWTHAGDVPEMSRHIREKFIELHSEPLLEMLYEELKEKYPEVAHEIPPPPPMGNMDIEQ 890
Query: 982 VLNSQYFFN 990
V +S YFF+
Sbjct: 891 VKDSIYFFS 899
>Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreococcus tauri
GN=Ot09g03980 PE=3 SV=1
Length = 973
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 346/923 (37%), Positives = 489/923 (52%), Gaps = 96/923 (10%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
++Q + E A E Y+E + LP ++ L ++ PL AI E E K
Sbjct: 79 RKQREAENLACEREVARYKEFARKTFAAGIGAQLPVVQKLLASFYVPLVDAIKEEHEKIK 138
Query: 196 KSH---RKMTHAPYFNDLPADKMAVITMHKLMGLLMT--------------NHNGIGCAR 238
+ + + Y L +K+AV+T+H + LM + G A+
Sbjct: 139 SNVPGVDRRVYGHYLALLEPEKLAVLTLHTTLSTLMKGDLRLDVPIFRGDDDTAASGSAK 198
Query: 239 VIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXX 298
I A Q+G ++ E + E+ E Y + + L+
Sbjct: 199 FITVAEQVGIVVQAEVNLGRMRAA------------EKIAKEAYKKSRQQTTLTADGGNA 246
Query: 299 XXXXXXXXXXXXXSSLIKQQKMQQVMGIIK----GLDDWKPWGQEARAKVGCRVMQLLIE 354
+ + KM + + K L++ + WG+E R KVG ++ L+
Sbjct: 247 ASKDVEELVEQRINLTLDTSKMNTIKSVSKHARNALENAE-WGREIRVKVGTVLLNALMN 305
Query: 355 TAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
TA I P + GG PAF H ++ YG++ + + + E +
Sbjct: 306 TAKIGVP-EENGGVL--TLPAFYHDYREG---------GYGMLHWHDSIYRFINTETMTR 353
Query: 413 NMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLE----- 465
++P + PM+VPP W RY+ G YL + MR K E RA LE
Sbjct: 354 AALVPVKHFPMIVPPREWVRYNNGGYLRANTLCMR---GKYSNEGPSRAQVQALEAKARE 410
Query: 466 -----------PIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVX----- 509
P+ +AL++LG T W++N +L ++ ++W GG +A++ R ++
Sbjct: 411 AELKNEPVLYQPVLDALNALGRTPWQVNTDVLPIVEEVWARGGGIAEVPLRAELQLPRWP 470
Query: 510 -------------XXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKM 556
+ ++ + V+ K N E HSQRC+ +KL VAR+M
Sbjct: 471 GGSYALRSDKNRFQLLASGLPGKGEVIEFLQSVRKTKKSNMELHSQRCDFLIKLQVAREM 530
Query: 557 KEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 616
K E Y+PHN+DFRGRAY MH +LNH+GSDLCRG+L F+E +PLG+ GLRW+ I A L
Sbjct: 531 KNEPNIYFPHNLDFRGRAYTMHVHLNHIGSDLCRGLLRFSEKKPLGERGLRWMYIQCATL 590
Query: 617 YAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRS 676
+ G DKL + RV F + ++ V SA PL WW +AE+P QCLA CI L +AL
Sbjct: 591 FGNGADKLPMDERVQFIVDQIEQVRASAQDPLAKGAWWQDAEEPWQCLATCIELDKALEL 650
Query: 677 PTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIM 736
P +S++PVH DGSCNGLQHYAALGRD G AVNLV DR ADVY+GIA+ + I+
Sbjct: 651 EDPTQFLSNLPVHQDGSCNGLQHYAALGRDLHGGEAVNLVPADRGADVYTGIANVLKRIV 710
Query: 737 RKDAE----KDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
D + + E + +DRKLVKQTVMTSVYGVT++GAR QI RL+ER
Sbjct: 711 ADDIKLIDSDNEEDVANAKLAMALAHHIDRKLVKQTVMTSVYGVTFIGARAQIYSRLRER 770
Query: 793 CAIEDDSEL-FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIG 851
+ED+ L + S YAA+ TL AL MF AR +M WL DCA + +T EPVRWTTP+G
Sbjct: 771 EVMEDNELLRYRVSTYAARRTLDALNNMFSNARDVMGWLTDCAAIATATGEPVRWTTPLG 830
Query: 852 LPAVQPYRQIGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
LP VQPY + ++T LQ +++ + DK V+ +Q +AFPPN++HS+D SHMM TAV
Sbjct: 831 LPVVQPYHRKSTKRVRTILQSFTIKTDDDKQPVMKVKQRSAFPPNYIHSIDSSHMMKTAV 890
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKL--N 967
AC AGL FAGVHDS+WTHACD+D MN+ILREKF+E++ P+LENL E ++S+P +
Sbjct: 891 ACVDAGLTFAGVHDSFWTHACDIDTMNKILREKFIEVHSEPLLENLYEELRESYPDVADK 950
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
FP P+ GD DL V +S YFF+
Sbjct: 951 FPRPPKPGDLDLNVVRDSVYFFS 973
>Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment)
OS=Polysphondylium pallidum GN=mtRNAP PE=3 SV=1
Length = 862
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/658 (43%), Positives = 426/658 (64%), Gaps = 30/658 (4%)
Query: 342 AKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDP 401
KVG +++ ++++ I + G + PAF + ++ + ++YG+I C
Sbjct: 226 TKVGSFMVKSIMDSCMINKYID--GEDIDEKVPAFYYKYR------YNNNKKYGVISCHD 277
Query: 402 LVTKGLEKS---AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKR 458
V +++ + M LPM+VPP WT +KG YL P ++MRT+G+K Q ++ +
Sbjct: 278 NVYSLMDEGHFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFIMRTNGSKLQKTSLYQ 337
Query: 459 APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVX---XXXXXX 515
+ L I+E L+ LG W+ N++++ ++ + W GG +ADL R D
Sbjct: 338 S---DLTNIYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLPSRYDFELPESPSQED 394
Query: 516 XXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAY 575
R + ++++ + NN+ HS RC+ KL VA+++ +E FY+PHNVDFRGR+Y
Sbjct: 395 LQDEKVKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQL-QEYTFYFPHNVDFRGRSY 453
Query: 576 PMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTEN 635
P+ P+LNH+GSD CR L+FAE + LG+ G WLK+ +ANL+ GVDK+ +E RVAFT
Sbjct: 454 PIPPHLNHMGSDFCRSTLKFAEEKELGERGFEWLKVQVANLF--GVDKVSFEDRVAFTME 511
Query: 636 HLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCN 695
++++++DSADRPL+G+RWWL+A+ P Q LAACI L++A+RS P T S +P+H DG+CN
Sbjct: 512 NIENIYDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPTTFKSSLPIHQDGTCN 571
Query: 696 GLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXX 755
GLQHYAALG D+LGA VNL+ +P DVY+G+A V +I+ +DA E
Sbjct: 572 GLQHYAALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHEDALAGDE------LAKL 625
Query: 756 XXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTA 815
+++RK++KQTVMTSVYGVT+VGAR QI+ L ++ I D++ LF A+ Y +KTT +
Sbjct: 626 LDGKIERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQI-DEATLFKATTYLSKTTFAS 684
Query: 816 LEEMFEAARSIMSWLADCAKVIA-STNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLS 874
L++MF ARSIM+WLA CA +I+ T E V W TP+GLP VQPYR+ G+ +KT +
Sbjct: 685 LDKMFIGARSIMAWLAQCAGLISKQTGECVAWYTPLGLPVVQPYRKGGKVSVKTIMNDYL 744
Query: 875 LRRETDKVLV--KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDV 932
+ + D + V ++Q +AFPPNF+HSLD +HM +TA+ CKK G+ FA VHDS+WTHA +
Sbjct: 745 MVEDNDHLPVDSRKQRSAFPPNFIHSLDSTHMFLTAIQCKKKGITFASVHDSFWTHASTI 804
Query: 933 DEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
D MN +LR +FVEL+ PILE L E F +P +N PP+P RG DL++V +S+YFF+
Sbjct: 805 DTMNTMLRHQFVELHSQPILERLREWFNHRYPTVNIPPVPNRGSLDLKKVRDSKYFFH 862
>D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpmA PE=3 SV=1
Length = 1010
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/622 (45%), Positives = 409/622 (65%), Gaps = 28/622 (4%)
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKS---AKNMVIPYLPMLVPPNNWTR 430
PAF + ++ + ++YG+I C V +++ + M LPM+VPP WT
Sbjct: 270 PAFYYKYR------YNNNKKYGVISCHDNVYSLMDEGHFLVEAMNARLLPMVVPPQPWTH 323
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
+KG YL P ++MRT+G+K Q ++ ++ L I+E L+ LG W+ N++++ ++
Sbjct: 324 PNKGCYLQYPCFIMRTNGSKLQKTSLYQS---DLTNIYEGLNVLGEVPWKTNEKMMSILL 380
Query: 491 QIWTSGGRLADLVDRDDVX---XXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIE 547
+ W GG +ADL R D R + ++++ + NN+ HS RC+
Sbjct: 381 EAWEKGGGIADLPSRYDFELPESPSQEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDTL 440
Query: 548 LKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLR 607
KL VA+++ +E FY+PHNVDFRGR+YP+ P+LNH+GSD CR +L+FAE + LG+ G
Sbjct: 441 YKLNVAKQL-QEYTFYFPHNVDFRGRSYPIPPHLNHMGSDFCRSMLKFAEEKELGERGFE 499
Query: 608 WLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAAC 667
WLK+ +ANL+ GVDK+ +E RVAFT ++++++DSADRPL+G+RWWL+A+ P Q LAAC
Sbjct: 500 WLKVQVANLF--GVDKVSFEDRVAFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAAC 557
Query: 668 INLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSG 727
I L++A+RS P T S +P+H DG+CNGLQHYAALG D+LGA VNL+ +P DVY+G
Sbjct: 558 IELTDAIRSGNPTTFKSSLPIHQDGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTG 617
Query: 728 IASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKR 787
+A V +I+ +DA E +++RK++KQTVMTSVYGVT+VGAR QI+
Sbjct: 618 VAQMVAQIVHEDALAGDE------LAKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIEN 671
Query: 788 RLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA-STNEPVRW 846
L ++ I D++ LF A+ Y +KTT +L++MF ARSIM+WLA CA +I+ T E V W
Sbjct: 672 ALSDKYQI-DEATLFKATTYLSKTTFASLDKMFIGARSIMAWLAQCAGLISKQTGECVAW 730
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFPPNFVHSLDGSHM 904
TP+GLP VQPYR+ G+ +KT + + + D + V ++Q +AFPPNF+HSLD +HM
Sbjct: 731 YTPLGLPVVQPYRKGGKVSVKTIMNDYLMVEDNDHLPVDSRKQRSAFPPNFIHSLDSTHM 790
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
+TA+ CKK G+ FA VHDS+WTHA +D MN +LR +FVEL+ PILE L E F +P
Sbjct: 791 FLTAIQCKKKGITFASVHDSFWTHASTIDTMNTMLRHQFVELHSQPILERLREWFNHRYP 850
Query: 965 KLNFPPLPERGDFDLREVLNSQ 986
+N PP+P RG DL++V ++Q
Sbjct: 851 TVNIPPVPNRGSLDLKKVRDNQ 872
>C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromonas pusilla
(strain CCMP1545) GN=MICPUCDRAFT_17826 PE=3 SV=1
Length = 838
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 330/858 (38%), Positives = 487/858 (56%), Gaps = 81/858 (9%)
Query: 173 KSLFLGWFEPLKSAIVAEQ-EVCKK--SHRKMTHAPYFNDLPADKMAVITMHKLMGLLM- 228
++ + EPL AI EQ E+ KK + + P+ L DK+AVIT+H ++ LM
Sbjct: 22 RNFLHNFLEPLSRAIEKEQAEIRKKVPGADRTNYGPFMLMLNPDKLAVITLHAVISQLMM 81
Query: 229 -------TNHNG-IGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGE 280
+ NG +G ++ + ++GEA++ E + ++P
Sbjct: 82 GDDRVKFSGDNGQVGKSKFVRVVERLGEAVQAEVNLSRLKQRGKVRP-------KDPSER 134
Query: 281 FYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEA 340
E +S SL K ++ V + + WG A
Sbjct: 135 ERRFREETAGVS------------------AKSLSKLTTVRSVAKFARRALNDSDWGMTA 176
Query: 341 RAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECD 400
R K+G + +LL+ETA I+ P + G +I+PAF+H ++ + Q+ RYG++
Sbjct: 177 RVKLGSVLAKLLVETAKIEVPDPESGEL--EIKPAFEHHYE--YVNRQQ---RYGMVSWH 229
Query: 401 PLVTKGLE----KSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK------ 450
P +E + A+ ++ Y+PM+ PP W+R+D+G YL ++VMR + +
Sbjct: 230 PAFFDYIEHEDMRHAQMSLVRYMPMVTPPRPWSRFDQGGYLCSETFVMRGNYTRLGPSWG 289
Query: 451 -------QQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLV 503
+Q + +P+ +AL+ LG T W +N+R +DV+ ++W GG +A +
Sbjct: 290 QIMALLGEQKRSDSDGECASYQPVLDALNVLGKTPWVVNERTVDVMQKVWDDGGGIAGVP 349
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
R V K +VK +EN E HSQRC+ +KL VA++M++E+ +
Sbjct: 350 PRRTVDEPVWPDPGEYVNA---KVRVK---RENRELHSQRCDFLIKLKVAQEMRDEEKIF 403
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA-GGVD 622
+PHN+DFRGRAY MH +LNH+GSD+CRG L F E RPLG++GL WL + ANLYA GGVD
Sbjct: 404 FPHNIDFRGRAYTMHAHLNHIGSDVCRGALLFQEARPLGENGLDWLYVQAANLYAAGGVD 463
Query: 623 KLCYESRVAFTENHLDDVFDSADRPL----EGRRWWLEAEDPLQCLAACINLSEALRSPT 678
KL + R + + LD + SA PL +WLEAE+P QCLA I ++ A+ S
Sbjct: 464 KLPLDERREWMKTRLDRIKASARDPLCADDANCAFWLEAENPWQCLATFIEIAAAVDSGD 523
Query: 679 PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRK 738
P + +PVH DGSCNGLQHYAALGRD G VNL D P DVY+G+A+ + ++ +
Sbjct: 524 PASYACRLPVHQDGSCNGLQHYAALGRDIGGGEQVNLTPRDSPGDVYTGVANVLKRMVAE 583
Query: 739 DAE--KDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIE 796
DA DPET + +DRKLVKQTVMTSVYGVT+VGAR QI+ RL+ER AIE
Sbjct: 584 DAADASDPETAATAAALAP---HIDRKLVKQTVMTSVYGVTHVGARQQIQSRLRERGAIE 640
Query: 797 DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQ 856
D+S + + YA++ TL AL +F AR +MSWL +CA+V++ +PV+WTTP+GLP VQ
Sbjct: 641 DESLRYRTANYASRRTLDALSNLFVNAREVMSWLGECARVVSKGGKPVQWTTPMGLPVVQ 700
Query: 857 PYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKA 914
PY+ R +++T +Q VL E + ++Q +AFPPNF+HS+D +HMM TA+AC++
Sbjct: 701 PYKAPSRKVVRTIVQSFVLQYDSEGSAIQKQKQKSAFPPNFIHSVDSAHMMKTALACQRR 760
Query: 915 GLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKL--NFPPLP 972
+ FAGVHDS+WTHA DVD MN ++R+ FVEL+ P++ L E ++++P+ P P
Sbjct: 761 DIAFAGVHDSFWTHARDVDAMNEVIRDTFVELHSEPLMTTLYEELRETYPEAADEIPKPP 820
Query: 973 ERGDFDLREVLNSQYFFN 990
G+ DL EV S+YFF+
Sbjct: 821 PLGELDLNEVKKSRYFFS 838
>Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum polycephalum
GN=rpoM PE=2 SV=1
Length = 997
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 295/627 (47%), Positives = 398/627 (63%), Gaps = 25/627 (3%)
Query: 375 AFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKS---AKNMVIPYLPMLVPPNNWTRY 431
AF H +K S RR G+++C + K ++ + + LPM+V P W
Sbjct: 385 AFVHYYKFYRQGST--TRRQGLLKCHENIFKYVDDGHVIKEVLDARLLPMVVKPVPWVSP 442
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQ 491
G YL++PS +MR + Q ++ A L +F AL++LG T WR+N+ + ++ +
Sbjct: 443 TVGGYLYVPSVLMRAQEHQAQYASLWNA---DLTTVFAALNALGETGWRVNEEVYHIVKK 499
Query: 492 IWTSGGRLADLVDRDDVXXXX--XXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELK 549
+W GG LA L R D+ R WK+ + I + NN+ +S RC+ K
Sbjct: 500 VWDDGGGLAALPTRTDITFPDPPDDLDTNDESKRTWKKTERKIRQLNNDLNSLRCDTTYK 559
Query: 550 LAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 609
L+VA + FY PHNVDFRGRAYP+ P+LN LGSD+CRG+L F E +PLG +GLRWL
Sbjct: 560 LSVAETLLH-MDFYLPHNVDFRGRAYPIPPHLNQLGSDMCRGLLVFKEKKPLGPTGLRWL 618
Query: 610 KIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACIN 669
KIHLANLY GVDK+ +++RV F + ++D VFDSAD PL+G +WW+ A+DP QCL C
Sbjct: 619 KIHLANLY--GVDKVPFDARVNFVDKNIDKVFDSADHPLDGEQWWVGADDPWQCLGTCFE 676
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L++ALRSP PE +S +PVH DGSCNGLQHYAALG D++G VNLV D P DVYSG+A
Sbjct: 677 LAKALRSPNPEEFLSCMPVHQDGSCNGLQHYAALGGDEIGGRKVNLVPSDAPQDVYSGVA 736
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
+ V + + +DA E ++DRK+VKQTVMTSVYGVTY+GAR QI L
Sbjct: 737 TVVAKRVHEDAIAGHELGK------LLDGKLDRKVVKQTVMTSVYGVTYIGARLQIHNAL 790
Query: 790 KER-CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTT 848
++ DD +L+ AS Y T AL +MF AR+IM WLADCA++IA +PV W T
Sbjct: 791 SDKDIEWRDDDQLYHASAYITNHTFEALNQMFLGARNIMKWLADCARIIAKNKDPVAWVT 850
Query: 849 PIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMM 906
P+GLP VQPY + + ++KT +Q +LS R+ V +Q +AFPPN+VHSLD HMM+
Sbjct: 851 PLGLPIVQPYVKNQQFLVKTVVQKVLLSDPRKDLPVNTIKQRSAFPPNYVHSLDSCHMML 910
Query: 907 TAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPK- 965
TA+ C+K G+ + VHDSYWTHAC VD+MN ILR++FVEL+ P+L L E F K + K
Sbjct: 911 TAIECQKKGISYTSVHDSYWTHACTVDQMNVILRDQFVELHSQPLLHRLREWFIKRYGKD 970
Query: 966 --LNFPPLPERGDFDLREVLNSQYFFN 990
+ FPP+PERG DL+ V S+YFF+
Sbjct: 971 GRVEFPPVPERGPLDLQVVKQSKYFFH 997
>F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_95344 PE=3 SV=1
Length = 862
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/581 (48%), Positives = 389/581 (66%), Gaps = 22/581 (3%)
Query: 420 PMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKW 479
PM++ P W +G YL ++R +G K Q ++ ++ +Q I+ AL+ LGNT W
Sbjct: 294 PMVIKPLPWISPFEGPYLHYKVPILRANGNKSQITSLLKSDLSQ---IYRALNVLGNTPW 350
Query: 480 RINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQV--KTIMKENN 537
IN++ D+I++ W +GG +AD+ + + + K + K I K N
Sbjct: 351 VINKKAYDIINEAWEAGGDIADMPRKINYEYPPLPEDVLTSLSSRKKHFLLEKKISKLNK 410
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
+ HS R + + KL VA K + Y+PHN+DFRGR+YP+ P+LNHLGSDLCR +L+F +
Sbjct: 411 DLHSLRSDCKYKLEVAEKFLDHT-IYFPHNLDFRGRSYPIPPHLNHLGSDLCRSLLKFEK 469
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
+PLGK GL WLKI ++NLY GVDK+ + R+ FT +++++ DSAD PL+G+RWWL A
Sbjct: 470 SKPLGKRGLDWLKIQISNLY--GVDKVSHADRIKFTTENIENIMDSADNPLKGKRWWLNA 527
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
+ P Q LAACI L+EALRSP PE S++P+H DG+CNGLQHYAALG D+LGA VNL+
Sbjct: 528 DYPWQALAACIELTEALRSPNPEEFCSNLPIHQDGTCNGLQHYAALGGDELGAIKVNLIP 587
Query: 718 GDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
D+P DVY+G+A V EI+ K+AE E N ++DRKLVKQTVMTSVYGVT
Sbjct: 588 SDKPQDVYTGVAGLVAEIVEKEAE---EGNK---FAIFFRGRIDRKLVKQTVMTSVYGVT 641
Query: 778 YVGARDQIKRRLKERCAIE------DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLA 831
Y+GAR+QI LKE+ E DD +FSAS Y K T AL MF ARSIM+WL+
Sbjct: 642 YIGAREQIHSSLKEKLDEETNPLEIDDEFMFSASSYITKHTFRALNNMFFGARSIMAWLS 701
Query: 832 DCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK--RQST 889
+CA +IA + PV W TP+GLP VQPYR+ ++ +K L +TDK+ V +Q +
Sbjct: 702 ECAVLIAKSGHPVNWITPLGLPVVQPYRKTSKNSVKILEGEFLLINDTDKLQVNTLKQKS 761
Query: 890 AFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEA 949
AFPPNF+HSLD +HM +TA+AC AG+ ++ VHDS+WTHACDVD+MN ++R++F+EL++
Sbjct: 762 AFPPNFIHSLDSTHMFLTALACDDAGITYSSVHDSFWTHACDVDKMNVLIRDQFIELHQQ 821
Query: 950 PILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
P+L+ LLE F+ P ++FP +PE+G+ DL +V NS+YFF+
Sbjct: 822 PLLQRLLEWFKTKHPTIDFPKIPEKGNLDLTQVKNSKYFFH 862
>F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyostelium fasciculatum
(strain SH3) GN=rpmA PE=3 SV=1
Length = 1078
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/575 (48%), Positives = 373/575 (64%), Gaps = 16/575 (2%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTK 478
LPM+V P W + G YL P+++MRT+G+K Q ++ A L I+E L+ LG
Sbjct: 517 LPMVVTPEPWDSPNNGCYLHYPTFIMRTNGSKLQTSSIISA---DLSKIYEGLNILGEVP 573
Query: 479 WRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK-WKRQVKTIMKENN 537
W IN+ +LD+I W SGG + DL R D RK + VK + + N+
Sbjct: 574 WNINRPVLDIILAAWESGGGIGDLPSRFDYELPLAAEYSESAEQRKKHAKLVKKVKQLNH 633
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
+ HS RC++ KL V ++++E FY+PHNVDFRGR+YP+ P+LNHLGSD CR +L FAE
Sbjct: 634 DLHSLRCDLSYKLDVGKQLREHD-FYFPHNVDFRGRSYPIPPHLNHLGSDFCRAMLTFAE 692
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
+PLG GL WLK+HLANL GVDK+ ++ R+AF ++H+ DV+DSAD PL G RWWL A
Sbjct: 693 KKPLGARGLMWLKVHLANL--SGVDKVSFDDRIAFVDSHMADVYDSADNPLNGARWWLAA 750
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
+ P Q LA CI L+ A+RS P +S +P+H DGSCNGLQHYAALG D+ GA VNL+
Sbjct: 751 DKPWQALATCIELANAVRSGDPANFMSSLPLHQDGSCNGLQHYAALGGDEFGAFKVNLLP 810
Query: 718 GDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
+P DVYSG+A V + DA E +V RK++KQTVMTSVYGVT
Sbjct: 811 SPKPQDVYSGVAQLVSATVEHDAANGHEV------AKALLGKVQRKIIKQTVMTSVYGVT 864
Query: 778 YVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
Y+GAR QI+ L+E+ ++DD +F AS Y AK T +L++MF ARSIM+WL+ CA I
Sbjct: 865 YIGARAQIQNALEEKYQMDDDF-VFQASSYLAKETFKSLDKMFLGARSIMAWLSQCASAI 923
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQSTAFPPNF 895
A + E V W TP+GLP VQPYR+ G+ IKT VL E V ++Q +AFPPN+
Sbjct: 924 AKSGECVAWYTPLGLPVVQPYRKGGKFSIKTIANEFVLVDDEEHLPVCSRQQRSAFPPNY 983
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
+HSLD +HM +TA+ +A + FA VHDS+WTHA D++N I+RE+FVEL++ P+L +L
Sbjct: 984 IHSLDSTHMFLTAIEASRANITFASVHDSFWTHAATTDDLNSIIREQFVELHQRPLLHDL 1043
Query: 956 LESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
F K +P +N PP+PE+G D+ +V S YFF+
Sbjct: 1044 HTWFTKRYPTVNIPPVPEKGHLDIEKVKESPYFFH 1078
>F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococcus
anophagefferens GN=AURANDRAFT_20280 PE=3 SV=1
Length = 902
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/672 (44%), Positives = 398/672 (59%), Gaps = 39/672 (5%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYG 395
W RAK+G ++ L++ A + GSP +HT + A R+ G
Sbjct: 253 WPTITRAKLGSALVMALLDVAKDDA------GSP-----LLEHTIVYSNA------RKIG 295
Query: 396 IIEC-DPLVTKG-LEKSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
II D L++ ++ + +P +LPMLV P W YD+G +L L + MRTHG Q
Sbjct: 296 IIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQ 355
Query: 453 CEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXX 512
EA + A + + LD++G W +N + D++ W SGG+ DL ++D+
Sbjct: 356 MEAFRNARGIE-GGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALPE 414
Query: 513 XXXXXXXXXIRKWK------------RQVKTIMKENNERHSQRCEIELKLAVARKMKEEK 560
R+ + + N E HS RC+ LKL++A + K+E
Sbjct: 415 PMDLAEALARADGDEDGGKKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSIAEQFKDEA 474
Query: 561 GFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGG 620
FY+P+NVDFRGRAYP+ P LNHLGSD+CR +L FAE + LG GL WL+IHLANL+ G
Sbjct: 475 AFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLF--G 532
Query: 621 VDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPE 680
+ K + R AF H D+ D+ +RP++G WWLEA++P Q LAAC L+ A P
Sbjct: 533 LSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAELDDPR 592
Query: 681 TTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA 740
+PVH DGSCNGLQHYAALGRD G VNL+ G+ P DVY G+ + V E + + A
Sbjct: 593 DYECALPVHADGSCNGLQHYAALGRDHEGGRQVNLLPGEAPRDVYEGVRALVAEKVARAA 652
Query: 741 EKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSE 800
D E + RK+VKQTVMTSVYGVT+VGAR QI RL + + D++E
Sbjct: 653 TGD-EALETVRLAQIVDGLITRKVVKQTVMTSVYGVTFVGARQQILGRLTDAGDV-DEAE 710
Query: 801 LFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQ 860
L+ +CY A+ TL LEE+F +AR IM WLA CA++++ +PV W TP+GLP VQPYR+
Sbjct: 711 LYLCACYVARLTLEVLEELFTSARHIMGWLAQCARLVSLHGQPVSWITPLGLPVVQPYRR 770
Query: 861 IGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDF 918
G+ +KT Q + L +DK V V RQ +AFPPNFVHSLD SHM+MTAV GL F
Sbjct: 771 DGQHAVKTLAQTVLLVDNSDKLPVSVTRQKSAFPPNFVHSLDSSHMLMTAVEMDHRGLAF 830
Query: 919 AGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFD 978
VHDSYWTHA DV MN LR F+ELYEAP+LE LLESF+ +P +FPPLP RGD D
Sbjct: 831 TAVHDSYWTHAADVATMNSTLRHCFLELYEAPLLEKLLESFELRYPDTDFPPLPPRGDLD 890
Query: 979 LREVLNSQYFFN 990
+ +VL++ YFF+
Sbjct: 891 IAKVLDADYFFS 902
>I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_14577 PE=3 SV=1
Length = 1239
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/900 (36%), Positives = 466/900 (51%), Gaps = 119/900 (13%)
Query: 138 QVKMETEAWEEAAKEYQELLEDICEQKLVPN---LPYMKSLFLGWFEPLKSAIVAEQEVC 194
Q+ +E + +E A + E E+ N L +K + W + L I E + C
Sbjct: 270 QLSLERQGYEMALQRLLHTKEQSIERGDTLNAMHLTPLKRIMWTWHQNLTLLIDEEIKRC 329
Query: 195 K----KSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA-RVIHAALQIGEA 249
+ + H + + P+ LP D ++++T+ +L+ L N +GIG + A L +G+A
Sbjct: 330 EVAAPRDHERRAYGPFLKVLPKDTLSIVTILELLRL--HNSSGIGDGMKTARAILDVGKA 387
Query: 250 IENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXX 309
+E E G ++ A+
Sbjct: 388 VEMEHNAVQMKKHAKSQQNIQNVLS---SGRLFNMAV----------------------- 421
Query: 310 XXSSLIKQQKMQQVMGIIKGLDDWKP-WGQEARAKVGCRVMQLLIETAYIQSPV--SQLG 366
+ ++++ + +W P W RAKVG + LL+E A I P + G
Sbjct: 422 -------NKAHKKIVNNDENSAEWNPVWPTTTRAKVGSVLTSLLLEAAKIPVPSRDPETG 474
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVP 424
+ PAF HT++ + +R GII+ +T+ L + ++ + P LPMLVP
Sbjct: 475 KKIVENIPAFFHTYQYVLG------KRVGIIKFADQLTEMLSREPIRDTLHPRLLPMLVP 528
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQ 483
P W Y+ G YL S MR + +Q + +A + L+ + LD LG+T+W++N+
Sbjct: 529 PRPWLSYNSGGYLQTKSVCMRIKDSAEQLIYLHKASERDLLQDVLAGLDVLGSTRWKVNK 588
Query: 484 RLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK----WKRQVKTIMKENNER 539
+ +I + W G +AD+ + K W +VK I
Sbjct: 589 NVFKIILEAWNKGEAIADIPPAVNGPTPLPPKPENYHTDPKAKFNWVNEVKQIQTTEKNN 648
Query: 540 HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 599
HS RC++ K+ AR Y+PHN+DFRGRAYPM P LNHLG+DLCRG+L F E +
Sbjct: 649 HSLRCDVNYKVETARAFLNLP-MYFPHNMDFRGRAYPMPPTLNHLGNDLCRGLLHFEEAK 707
Query: 600 PLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAED 659
PLG+ G RWLKIHLANLY G DK + R FT +++D++ D+ D PL G++WWL+A+
Sbjct: 708 PLGEKGWRWLKIHLANLY--GYDKHSFTEREQFTLDNIDNIIDAVDNPLTGKQWWLKADS 765
Query: 660 PLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGD 719
P QCLAAC ++EA+RS PE S +PVH DG+CNGLQHYAALG D GA AVNL GD
Sbjct: 766 PWQCLAACFEVAEAVRSGKPEEFKSRLPVHQDGTCNGLQHYAALGGDLAGARAVNLAAGD 825
Query: 720 RPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYV 779
RPADVY+G+A V + + K AE+ E V RK+VKQTVMT+VYGVT+V
Sbjct: 826 RPADVYTGVADMVNKYIDKAAEEGNE------YAKILQGNVSRKVVKQTVMTNVYGVTFV 879
Query: 780 GARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA- 838
GAR QI+ RLKE I D ++++ S Y AK ++L EMF AR I WL D A+ IA
Sbjct: 880 GARAQIENRLKENPDIPRD-KVYALSSYLAKAVFSSLGEMFNGARQIQDWLTDSARRIAR 938
Query: 839 ----------------------------------------STNEP-------VRWTTPIG 851
S P V WTTP+G
Sbjct: 939 SVPLETLEESGVVKHNSGSIEDAKKSKAKAKESKKKKQVFSARNPSSSQMTSVIWTTPLG 998
Query: 852 LPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
LP VQPYR+ G+ + T LQ + + + V +QSTAFPPNF+HSLD +HM+M+AV
Sbjct: 999 LPIVQPYRRSGKRQVATLLQTIYIEDPDASRPVNALKQSTAFPPNFIHSLDATHMLMSAV 1058
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
AC K G+ FA VHDSYWTHACDVD MN ++RE+F+EL+ PI+ENLL+ FQ+ + + P
Sbjct: 1059 ACHKRGMTFASVHDSYWTHACDVDSMNEVIREQFIELHSQPIMENLLQEFQERYKEFRVP 1118
>M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosporidium toruloides
NP11 GN=RHTO_03678 PE=4 SV=1
Length = 1343
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 328/939 (34%), Positives = 497/939 (52%), Gaps = 123/939 (13%)
Query: 87 SVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAW 146
+VAE D E+ S G M+K ++G L L RQ +E ++
Sbjct: 319 NVAEVTPVQGDKGENVSLG------MLKHNLRG---LAVNTGRDGLPLSTRQRLLEESSY 369
Query: 147 EEAAKEY---QELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI----VAEQEVCKKSHR 199
+ A + Y +E L I + + +++ + W + L + +++ R
Sbjct: 370 DAARQLYIHSREQLAQIGKDEGSLQSNWIQQIMFDWHKKLVKTLEDIAAGKRKDIDSGFR 429
Query: 200 KMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXX 259
P+ + LP DK+A+IT+ ++M + + + + L +G A+ENE
Sbjct: 430 DQELEPFLHLLPIDKLALITIVEVMRMCGSGNFAADGMKTTRVVLNVGRAVENE------ 483
Query: 260 XXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQK 319
+HA G LS + ++
Sbjct: 484 ----------------------HHAESLRGSLSTKKLQEELAKIESRGTVNPDGTVTPRR 521
Query: 320 MQQVMGII----------KGLDDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLG 366
+ +GI+ G W P W Q RA+VG ++ L+E A ++ + + G
Sbjct: 522 QTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALMEIAEVERTIKHPKTG 581
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVP 424
+ +PAF H ++ + GII+ +P V++ L+K ++ + +LPMLV
Sbjct: 582 EQVTEKQPAFSHAYQYMRGT------KLGIIKLNPAVSERLDKDPLDITLHPRFLPMLVK 635
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQ 483
P W ++ GAYL + +MRT +++Q + +++A N L+ IF LD+LG W+IN+
Sbjct: 636 PKPWLTWNSGAYLIHQTPMMRTKESEEQVQYLQQASDNHTLDIIFSGLDTLGAVPWKINR 695
Query: 484 RLLDVISQIWTSGGRLADL---VDRDDVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNE 538
++ D++ ++W SG AD+ + ++ + ++R+V+ +M++
Sbjct: 696 KVFDIVVKVWNSGDAFADIPAAAQKLEIPTLEIPKGVMSDPRARDNYRRRVRELMQQKRA 755
Query: 539 RHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 598
HS RC++ KL +AR E FY+PHN+DFRGRAYP+ P L+H+G D+ RG+L FAE
Sbjct: 756 AHSMRCDLNYKLEIARAFLGET-FYFPHNLDFRGRAYPIPPNLSHIGDDMSRGLLLFAES 814
Query: 599 RPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAE 658
+PLG+ GLRWLKIH++NL G DK ++ R AFT HL+DVFDSAD PLEGR+WW +A+
Sbjct: 815 KPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDSADNPLEGRKWWTKAD 872
Query: 659 DPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRG 718
DP QCLA CI ++ ALRS P +PVH DG+CNGLQHYAALG D GA VNL G
Sbjct: 873 DPWQCLATCIEVTNALRSEDPTKYECGLPVHQDGTCNGLQHYAALGGDINGARQVNLDIG 932
Query: 719 DRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTY 778
DRPADVYSG+A V EI+ +D E E ++ RK+VKQTVMT+VYGVT+
Sbjct: 933 DRPADVYSGVAQMVQEIITRDMEAGIE------EAKLLDGKITRKVVKQTVMTTVYGVTF 986
Query: 779 VGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA 838
+GA++QI+R+LK+R + + L+ S Y + L ++ ++F+ A +I +WL CA++IA
Sbjct: 987 IGAKNQIERQLKDRGDVPPE-RLYRCSIYLGRLVLDSIGDLFKGAAAIQTWLNRCARLIA 1045
Query: 839 STNEPVR---------------------------------WTTPIGLPAVQPYRQIGRSI 865
+ P R WTTP+GLP QPYR+ +
Sbjct: 1046 KSIPPQRIEAALQQEKPGKNKTKKALALSRIPKEQMTSVVWTTPLGLPVCQPYRRPKKKQ 1105
Query: 866 IKTSLQVL-----SLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
++T+LQ + S+ E D + Q+TAFPPNF+HSLD +HMMMTA+ACK + FA
Sbjct: 1106 VQTALQTVHIWDPSIPAEVDP---RAQATAFPPNFIHSLDATHMMMTALACK-GKIAFAS 1161
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESF 959
VHDSYWTHACDVDEM+ ILR+ F++L+ IL L + F
Sbjct: 1162 VHDSYWTHACDVDEMSTILRDTFIDLHSQDILGRLRDEF 1200
>G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotorula glutinis
(strain ATCC 204091 / IIP 30 / MTCC 1151) GN=RTG_02653
PE=3 SV=1
Length = 1343
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 328/939 (34%), Positives = 493/939 (52%), Gaps = 123/939 (13%)
Query: 87 SVAEAIVSSSDTEEDCSGGANEVKQMVKKEVKGKPLLDRKAKYKDTMLRKRQVKMETEAW 146
+VAE D E+ S G M+K ++G L L RQ +E ++
Sbjct: 319 NVAEVAPVQGDKGENVSLG------MLKHNLRG---LAVNTGRDGLPLSARQRLLEESSY 369
Query: 147 EEAAKEY---QELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAI----VAEQEVCKKSHR 199
+ A + Y +E L I + + +++ + W + L + +++ R
Sbjct: 370 DAARQLYIHSREQLAQIGKDEGGLQSNWIQQIMFDWHKKLVKTLEDIAAGKRKDIDSGFR 429
Query: 200 KMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXX 259
P+ LP DK+A+IT+ ++M + + + L +G A+ENE
Sbjct: 430 DRELEPFLQLLPVDKLALITIVEVMRMCGSGTFAADGMKTTRVVLNVGRAVENE------ 483
Query: 260 XXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQK 319
+HA LS + ++
Sbjct: 484 ----------------------HHAEALRDSLSTKKLQEELAKVESRGTINPDGTVTPRR 521
Query: 320 MQQVMGII----------KGLDDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLG 366
+ +GI+ G W P W Q RA+VG ++ L+E A ++ + + G
Sbjct: 522 QTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALMEIAEVERTIKHPKTG 581
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVP 424
+ +PAF H ++ + GII+ +P V++ L+K ++ + +LPMLV
Sbjct: 582 EQVSEKQPAFSHAYQYMRGT------KLGIIKLNPAVSERLDKDPLDITLHPRFLPMLVK 635
Query: 425 PNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQ 483
P W ++ GAYL + +MRT +++Q + +++A N L+ IF LD+LG W+IN+
Sbjct: 636 PKPWLTWNSGAYLLHQTPMMRTKESEEQVQYLQQASDNHTLDIIFSGLDTLGAVPWKINR 695
Query: 484 RLLDVISQIWTSGGRLADL---VDRDDVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNE 538
++ D + Q+W SG AD+ + ++ + ++R+V+ +M++
Sbjct: 696 KVFDTVVQVWNSGDAFADIPAAAQKLEIPTLEIPKGVMSDPRARDNYRRRVRELMQQKRA 755
Query: 539 RHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 598
HS RC++ KL +AR E FY+PHN+DFRGRAYP+ P L+H+G D+ RG+L FAE
Sbjct: 756 AHSMRCDLNYKLEIARAFLGET-FYFPHNLDFRGRAYPIPPNLSHIGDDMSRGLLLFAES 814
Query: 599 RPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAE 658
+PLG+ GLRWLKIH++NL G DK ++ R AFT HL+DVFDSAD PLEGR+WW +A+
Sbjct: 815 KPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDSADNPLEGRKWWTKAD 872
Query: 659 DPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRG 718
DP QCLA CI L+ ALRS P +P+H DG+CNGLQHYAALG D GA VNL G
Sbjct: 873 DPWQCLATCIELTNALRSEDPTKYECGLPIHQDGTCNGLQHYAALGGDINGARQVNLDIG 932
Query: 719 DRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTY 778
DRPADVYSG+A V EI+ +D E E ++ RK+VKQTVMT+VYGVT+
Sbjct: 933 DRPADVYSGVAQMVQEIITRDVEAGVE------EAKLLDGKITRKVVKQTVMTTVYGVTF 986
Query: 779 VGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA 838
+GA++QI+R+LK+R + + L+ S Y + L ++ ++F+ A +I +WL CA++IA
Sbjct: 987 IGAKNQIERQLKDRGDVPAE-RLYKCSIYLGRLVLDSIGDLFKGAAAIQTWLNRCARLIA 1045
Query: 839 STNEPVR---------------------------------WTTPIGLPAVQPYRQIGRSI 865
+ P R WTTP+GLP QPYR+ +
Sbjct: 1046 KSIPPQRIEAALKQEKPGKNKSKKALALSRIPKEQMTSVVWTTPLGLPVCQPYRRPKKKQ 1105
Query: 866 IKTSLQVL-----SLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
++T+LQ + S+ E D + Q+TAFPPNF+HSLD +HMMMTA+AC K + FA
Sbjct: 1106 VQTALQTVHIWDPSIPAEVDP---RAQATAFPPNFIHSLDATHMMMTALAC-KGKIAFAS 1161
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESF 959
VHDSYWTHACDVDEM+ ILR+ F++L+ IL L + F
Sbjct: 1162 VHDSYWTHACDVDEMSTILRDTFIDLHSQDILGRLRDEF 1200
>B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 323
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 254/323 (78%), Positives = 285/323 (88%)
Query: 668 INLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSG 727
+NL+EALRS +PETTISH+PVH DGSCNGLQHYAALG+DKLGA AVNLV G++PADVY+G
Sbjct: 1 MNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTG 60
Query: 728 IASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKR 787
IA+RV+EIMR DA+KDP QVDRKLVKQTVMTSVYGVTY+GAR+QI+R
Sbjct: 61 IANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRR 120
Query: 788 RLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWT 847
RLKER I +DSELF ASCYAAK TLTAL EMF+AARSIM+WL DCAKVIA NEPVRWT
Sbjct: 121 RLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWT 180
Query: 848 TPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMT 907
TP+GLP VQPYR++GR +IKTSLQVL+L+RETDKV+VKRQ TAFPPNFVHSLDGSHMMMT
Sbjct: 181 TPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 240
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN 967
AVACK+ GL+FAGVHDSYWTHA DVD MN+ILREKFVELY+ PILENLLESF+KSFPKL
Sbjct: 241 AVACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLK 300
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
FPPLPERGDFD++EVL S YFFN
Sbjct: 301 FPPLPERGDFDMKEVLESTYFFN 323
>E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorella variabilis
GN=CHLNCDRAFT_27382 PE=3 SV=1
Length = 599
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/594 (46%), Positives = 369/594 (62%), Gaps = 24/594 (4%)
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVK---------RAPYNQLEPIF 468
YLPML+PP W R + G +L L + VMR G++ Q E + R P L ++
Sbjct: 9 YLPMLIPPVPWLRNNLGGHLTLRNTVMRIRGSRLQQEMLDAADQEWGEGRGP--GLSRVY 66
Query: 469 EALDSLGNTKWRINQRLLDVISQIWTSGGRLADL-------VDRD---DVXXXXXXXXXX 518
+AL+SLG+T W INQ + V+ +W GG + D+ + RD
Sbjct: 67 DALNSLGSTAWAINQDVFRVVETVWAWGGGVCDIPPKVNLPLPRDLKPGFRQHRHAPGQL 126
Query: 519 XXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMH 578
+R + + + K+N E HS RC++E KLA+AR+ +E FY+PHNVDFRGRAYPMH
Sbjct: 127 QFYLRTRRADISRMQKKNRELHSLRCDMEYKLAIAREFVKEPRFYFPHNVDFRGRAYPMH 186
Query: 579 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLD 638
P+LNHLG+DL RG+L+FAEGRPLG+ GL WL + ANL+ GVDKL RV + E+HL
Sbjct: 187 PHLNHLGADLSRGLLQFAEGRPLGEHGLFWLYVQAANLWGQGVDKLPLWGRVKWVEDHLA 246
Query: 639 DVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQ 698
+ + +W +AE+P Q L+ C + +A S P +SHVPVH DGSCNGLQ
Sbjct: 247 QILMTTRGSHGQVAYWWQAENPFQFLSTCFEIHKANASGDPARFVSHVPVHQDGSCNGLQ 306
Query: 699 HYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXX 758
HYAALGRD G AVNL DRP R + A P
Sbjct: 307 HYAALGRDFSGGHAVNLCPTDRPQAGGGARKPRTPDRACIHASNQPSNQPDLLMCHTLCA 366
Query: 759 QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEE 818
+DRKLVKQTVMTSVYGVT+VGAR Q+ RLKER ED+ ++ SCY AK TL L E
Sbjct: 367 GLDRKLVKQTVMTSVYGVTFVGARAQVGNRLKER-GFEDNQFMYKVSCYTAKVTLECLHE 425
Query: 819 MFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE 878
MF++A+ M WL++CA++IA V W TP+GLP VQPYR+ R ++T LQ L L
Sbjct: 426 MFQSAKHTMHWLSECARLIAKEGHSVMWHTPLGLPVVQPYRRKDRQHVRTLLQRLVLVEN 485
Query: 879 TDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMN 936
D ++ +RQ TAFPPN++HS+D SHMM+TA+AC++ G+DFAGVHDS+WTHA V+ MN
Sbjct: 486 NDDLPIMKQRQRTAFPPNYIHSIDSSHMMLTAIACQQEGIDFAGVHDSFWTHAGTVERMN 545
Query: 937 RILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+LREKF+EL++ P+LE LLE F++ +P ++FPP+P +G DL ++ + YFF+
Sbjct: 546 ELLREKFIELHQQPLLEQLLEEFKRLYPTVDFPPIPPKGTLDLDQLRQAAYFFS 599
>K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G002918 PE=3 SV=1
Length = 1018
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 303/707 (42%), Positives = 410/707 (57%), Gaps = 61/707 (8%)
Query: 331 DDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKD 390
DD W + KVG ++ + + +I PV + G +PAF H + +
Sbjct: 326 DDVGGWDKRINLKVGAALIDCIQRSCFI--PVEK-GSKEMSNQPAFVHDYVF------ER 376
Query: 391 IRRYGIIECDPLVTKG-LEKSAKNMVIP----YLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
RR G+I+ P + L ++P YLPMLVPP NW G YL L + +MR
Sbjct: 377 NRRAGVIKIHPTIANAVLSTKPGANILPWTARYLPMLVPPKNWDSVVNGGYLKLHTKIMR 436
Query: 446 THGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
+ Q + VKR +QL F++L+ L + W IN +LDVI ++W +GG DL R
Sbjct: 437 QRDSAWQMDCVKRGEMDQL---FKSLNLLASVPWVINTDVLDVILKVWENGGGFGDLPQR 493
Query: 506 DDVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D+ ++ +++ V+ I + N E HS RC+ KL VA + K EK Y
Sbjct: 494 TDIEPPEWKAEYEHDAEKRDTYEKMVRKIQQRNQELHSLRCDTLYKLQVAEEFKHEKALY 553
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
YP+N+DFRGR YP+ P LNHLGSDL R +L F + +PLGK+GLRW+KIHLAN++ GVDK
Sbjct: 554 YPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGKNGLRWMKIHLANVF--GVDK 611
Query: 624 LCYESRVAFTENHLDDVFDSADRPL-EGR-RWWLEAEDPLQCLAACINLSEALRSPTPET 681
++ RV FT+ +L SA P EG WW +A+ P L C L AL SP PE
Sbjct: 612 CSFDERVEFTDANLSKAIASACDPFGEGDCAWWKDADYPFLALGVCFELKRALESPDPEK 671
Query: 682 TISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAE 741
S++P+H DGSCNGLQHYAALGRD LG VNLV RP+DVY+G+A++V+ + +DA
Sbjct: 672 YESNIPIHQDGSCNGLQHYAALGRDALGGQQVNLVPAPRPSDVYTGVATQVMRKVERDAA 731
Query: 742 K-------------DPETNSXXXXXXXXXXQ----------------VDRKLVKQTVMTS 772
D ++ + Q + RK+VKQTVMTS
Sbjct: 732 MELPEIIPDMERILDDDSPAERARKMAIKEQWNLRRRKKYAQFLLGTITRKVVKQTVMTS 791
Query: 773 VYGVTYVGARDQIKRRLKERCAIED---DSEL----FSASCYAAKTTLTALEEMFEAARS 825
VYGVTY+GAR QI RL+E + DSEL + ASCYAA+ T+ ++ ++F +AR+
Sbjct: 792 VYGVTYIGARKQISARLEEVFLTKGMMMDSELEDQIYHASCYAAEVTMESMGDLFTSARN 851
Query: 826 IMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ-VLSLRRETDKVLV 884
IM+WL DCA +AS + + W TP+GLP VQPYR+ ++T +Q VL + E V
Sbjct: 852 IMTWLGDCASKVASNGQAMSWITPLGLPVVQPYRRNTSQQVRTKVQHVLMVLTEQLPVSS 911
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVAC-KKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
RQ TAFPPNFVHSLD +HM+MTA+ C ++ + FA VHDSYWTHAC VD MN+ LRE+F
Sbjct: 912 GRQKTAFPPNFVHSLDSTHMLMTALKCLEEDEIAFAAVHDSYWTHACSVDTMNKRLREQF 971
Query: 944 VELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
V+LY+ P+LE+LL + FPK F +PE G DL V +S YFFN
Sbjct: 972 VDLYQKPLLEDLLTELRLRFPKTEFHDIPELGTLDLTVVKDSPYFFN 1018
>Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) OS=Acanthamoeba
castellanii PE=2 SV=1
Length = 512
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/518 (50%), Positives = 358/518 (69%), Gaps = 17/518 (3%)
Query: 479 WRINQRLLDVISQIWTSGGRLADLVDRDDVXXXX--XXXXXXXXXIRKWKRQVKTIMKEN 536
+ IN R+ +VI + W +GG +ADL R ++ +K+ R+ K N
Sbjct: 4 FSINNRMHEVICEAWDNGGGIADLPSRTNLPELEPPADYYSDLEVKQKFDRERKKAKIAN 63
Query: 537 NERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA 596
HS RC++ KL VA++ +++ FYYPHN+DFRGR YP+ P+LNHLG DLCRG+L FA
Sbjct: 64 YNLHSLRCDVTYKLQVAKEC-QDRTFYYPHNMDFRGRTYPIPPHLNHLGQDLCRGLLTFA 122
Query: 597 EGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLE 656
EG+PLG+SGLRWLK+HLAN++ G DK+ +E RV F EN+++ + DSA PL G+RWWL+
Sbjct: 123 EGKPLGESGLRWLKVHLANVF--GNDKITFEDRVRFVENNMEHIMDSASNPLGGQRWWLK 180
Query: 657 AEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLV 716
A+ P QCLAA I L A S PET +S +P+H DGSCNGLQHYAALG D++GA VNL+
Sbjct: 181 ADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAALGGDEMGARQVNLL 240
Query: 717 RGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGV 776
+RP DVYSG+ V+ + DA E +VDRK++KQTVMTSVYGV
Sbjct: 241 PSERPQDVYSGVVELVVRRLEDDAANGVEI------AQRLLGKVDRKVIKQTVMTSVYGV 294
Query: 777 TYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKV 836
T++GAR QI+ LK++ + DD ++F AS Y A +T ++++EMF AR IM+WL+DCA +
Sbjct: 295 TFIGARQQIENALKDKGKVSDD-DMFLASRYLATSTFSSIKEMFSGAREIMTWLSDCATL 353
Query: 837 IASTNEPVRWTTPIGLPAVQPYRQIGRSI--IKTSLQ-VLSLRRETDKVLV--KRQSTAF 891
IA +PV W TP+GLP VQPYR G+ + T+LQ V+ ++ E D + V ++Q TAF
Sbjct: 354 IAKQGKPVTWVTPMGLPVVQPYRTKGKQTQTVVTALQNVMLVKEENDSLPVNTRKQRTAF 413
Query: 892 PPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 951
PPN+VHSLD +HMM+TA+ C +AGL +A VHDSYWTHA VD MN ILR FV+L+ P+
Sbjct: 414 PPNYVHSLDSTHMMLTALQCHEAGLTYASVHDSYWTHASSVDTMNHILRRTFVDLHSQPL 473
Query: 952 LENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
L++LL F++++P + FPP+P +GD DL+E++NS YFF
Sbjct: 474 LDDLLAHFKRTYPGIEFPPVPPKGDLDLKEIINSPYFF 511
>A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) OS=Chrysanthemum
morifolium GN=NEP PE=3 SV=1
Length = 383
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/406 (63%), Positives = 313/406 (77%), Gaps = 24/406 (5%)
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
YD G + FLPSY+MRTHG++QQ +AV+ AP +Q++ I+EALD+LG+TKWR+N+RLL+V+
Sbjct: 1 YDCGGHFFLPSYLMRTHGSRQQQDAVEDAPPSQMQKIYEALDTLGSTKWRVNKRLLNVVE 60
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
IW +GG +A LV+R DV I++W+ V+ K N E HSQRC+IELKL
Sbjct: 61 SIWAAGGDIAGLVNRQDVSIPDLNSEDSSE-IKEWRWSVRKAKKMNQELHSQRCDIELKL 119
Query: 551 AV-ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 609
+V AR+MK+E+GFYYPHN+DFRGRAYPMHP+LNHL SDLCRGILEFAEGRPLGKSGLRWL
Sbjct: 120 SVVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWL 179
Query: 610 KIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACIN 669
+IHLANLY GV+KL Y+ R+AF E+H+ ++ DSAD PL G RWWL AEDP QCLAACIN
Sbjct: 180 RIHLANLYGSGVEKLSYDGRLAFVESHISEIIDSADNPLGGNRWWLTAEDPFQCLAACIN 239
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L+E L+S +P T ISH+PVH DGSCNGLQHYAALGRD + AAAVNLV G++PADVYS IA
Sbjct: 240 LAETLKSSSPHTVISHLPVHQDGSCNGLQHYAALGRDTVEAAAVNLVAGEKPADVYSEIA 299
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
+R +I+ QV+RKLVKQTVMTSVYGVT+VGAR+QIKRRL
Sbjct: 300 TRYADII----------------------QVNRKLVKQTVMTSVYGVTFVGAREQIKRRL 337
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAK 835
+E+ I DD LFSASCYAA+ TL AL E+FEAAR M WL DCAK
Sbjct: 338 QEKGHISDDQLLFSASCYAARVTLEALGEIFEAARGTMCWLGDCAK 383
>F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C137G7135 PE=3 SV=1
Length = 1012
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 330/901 (36%), Positives = 470/901 (52%), Gaps = 100/901 (11%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQE- 192
L RQ+++E ++ A +++ + +D+ + + ++L +GW EP + I EQ
Sbjct: 168 LFARQIRLECAIYDMAVEKHLAVRQDVGKLGRASQVNAAQNLVVGWMEPAIALISNEQRD 227
Query: 193 --VCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAI 250
K+S + P L A +A ++++ ++ + + G AR I AL +G +
Sbjct: 228 VLAGKRSLDSSIYGPALLLLDAKVLAALSINTMLNNCLVDSKG---ARFIKLALALGNIV 284
Query: 251 ENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXX 310
+ + D E Y ++ G +D
Sbjct: 285 QEHI---------------CENKRKRKDSEKYFLSLVRGIQND----------------- 312
Query: 311 XSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGG--- 367
+ ++ M+ V W + KVG ++ + + Y+ + Q G
Sbjct: 313 ----VFRKHMENVYTTAGY------WDKRLNLKVGAALIDFIQRSCYVPDRLLQAAGRKV 362
Query: 368 ----------SPPDIRPAFKHTFKTAMADSQKDIRRYGIIEC-DPLVTKGLEKSAKNMVI 416
PP AF H + RR G+ + D + L V+
Sbjct: 363 HGTLEEHDPEKPPKKEQAFVHCYYYERN------RRSGMFKMHDTIFNLILNTDPGMNVL 416
Query: 417 P----YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALD 472
P YLPMLVPP W + G YL L + +MR Q + VKRAP L+ +F L+
Sbjct: 417 PWTARYLPMLVPPKRWENPNNGGYLKLHTKIMRQRDIVWQMDCVKRAP---LQEVFTTLN 473
Query: 473 SLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK--WKRQVK 530
L W INQ +LDVI +IW GG DL R+D ++ +
Sbjct: 474 LLAEVPWVINQEILDVILRIWQEGGGFGDLPSREDFPFPDNKPEDEEDPEKRQALAKAHA 533
Query: 531 TIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCR 590
+ + N E HS RC+ KL VA++ + EK Y+P+N+DFRGR YP+ P LNHLGSD+ R
Sbjct: 534 KVRQRNRELHSLRCDTLYKLQVAQEFRNEKEIYFPYNLDFRGRVYPIPPNLNHLGSDMSR 593
Query: 591 GILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP--L 648
+L F + +PLGK GLRWLKIHLAN++ GVDK ++ RVAFTE++L VF SA P +
Sbjct: 594 SLLLFRDRKPLGKDGLRWLKIHLANVF--GVDKCSFDERVAFTESNLTKVFASARDPHGV 651
Query: 649 EGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKL 708
WW AE P L C L AL SP PET +S++PVH DGSCNGLQHYAALGRD
Sbjct: 652 GDAVWWKTAEYPFLALGVCFELKRALNSPDPETYLSNIPVHQDGSCNGLQHYAALGRDLK 711
Query: 709 GAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD-PETNSXXXXXXXXXXQ-------- 759
G VNLV RP DVY +A +V++++ +DA + PE + +
Sbjct: 712 GGEQVNLVPASRPGDVYIKVAEQVMDLVNRDANLEIPEDATPERKLSLAHRKRCATFLLG 771
Query: 760 -VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER-------CAIEDDSELFSASCYAAKT 811
+ R++VKQTVMTSVYGVT++GAR QI+ RL+E E D +++ +SCYAA+
Sbjct: 772 TITRRVVKQTVMTSVYGVTFIGARKQIQARLQEANLSNGNLSDEEMDQQVYDSSCYAAEI 831
Query: 812 TLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
T+ +L +F +AR+IM WL DCA +A + + W TP+GLP VQPYR+ G ++T +Q
Sbjct: 832 TMESLRNLFTSARNIMEWLGDCASKVAEEGQLMSWITPLGLPVVQPYRRFGSQQVRTKVQ 891
Query: 872 -VLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVAC-KKAGLDFAGVHDSYWTHA 929
VL + + V RQ +AFPPNFVHSLD +HM+MTA C ++ + FA VHDSYWTHA
Sbjct: 892 HVLMVSTDHLPVSPGRQKSAFPPNFVHSLDSTHMLMTAKKCLEEDAIAFAAVHDSYWTHA 951
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
C V+ MN LRE+FV LYE P+LE+LLE + FP F +P+ G+ LR VL S+YFF
Sbjct: 952 CSVETMNMRLREEFVRLYEHPLLEDLLEQLELRFPSTKFKKIPKLGELQLRNVLQSEYFF 1011
Query: 990 N 990
N
Sbjct: 1012 N 1012
>Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) OS=Stygamoeba
sp. ruffled GN=mtRNAP PE=3 SV=1
Length = 661
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/626 (44%), Positives = 388/626 (61%), Gaps = 29/626 (4%)
Query: 375 AFKHTFKTAMADSQKDIRRYGIIECDPLVTKG-----LEKSAKNMVIPYLPMLVPPNNWT 429
AFKHT+ R+ G I C P V + L + A + + LPM+VPP WT
Sbjct: 55 AFKHTYTYTTK------RKVGAITCAPSVLQTIRDGHLAQEANHARM--LPMVVPPKPWT 106
Query: 430 RYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVI 489
D G YL + S VMR ++ Q + + + + L ++ +LD L W+IN+R+L V
Sbjct: 107 APDVGGYLVVKSNVMRVRDSRLQWDMLSKTGTD-LSNVYRSLDELSAVPWKINKRVLRVA 165
Query: 490 SQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEI 546
++W GG + DL R D+ + + R ++ + N + HS RC+
Sbjct: 166 QELWQRGGGIGDLPSRTDLPLPEAPDNYKDMDPAERSAYYRHLRRQQRANADLHSLRCDT 225
Query: 547 ELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 606
LKL VA + + FY+PHN+DFRGR YP+ P+LNHLGSDLCRG+L F+EGR LG +GL
Sbjct: 226 TLKLGVAEQFQNLDRFYFPHNMDFRGRTYPIPPHLNHLGSDLCRGLLCFSEGRELGPNGL 285
Query: 607 RWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAA 666
WLK+ LANL+ G +K + R F + ++ V +A P WW A+DP Q L+
Sbjct: 286 GWLKVQLANLF--GNNKCSFADRQRFADENMARVLATAADP-ATETWWHAADDPWQALST 342
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
C L++AL SP P +S++P+HMDGSCNGLQHYAALG D+ GA VNL+ +P DVYS
Sbjct: 343 CYELTDALASPDPARHVSYLPIHMDGSCNGLQHYAALGGDEEGARKVNLLPAPQPDDVYS 402
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
G+A+ V ++ +DA+K ++ R++VKQTVMTSVYGVTYVGAR QI+
Sbjct: 403 GVATIVSRLVEEDAQKG------HSIALLLRDRISRRIVKQTVMTSVYGVTYVGARAQIQ 456
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRW 846
L ++DD+ + AS Y A TL A+ EMF AR IM+WLA CA +IA + EPV W
Sbjct: 457 NALSSTDLLDDDAA-WQASRYLAAHTLEAVREMFVGAREIMAWLATCAGLIAQSGEPVMW 515
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDK--VLVKRQSTAFPPNFVHSLDGSHM 904
TTP+GLP VQPYR+ G+ ++T +Q ++L+ +D + V RQ TA PPNF+HSLD +HM
Sbjct: 516 TTPLGLPVVQPYRRPGKQFVQTVVQKVTLQESSDDLPIHVTRQRTAHPPNFIHSLDSTHM 575
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFP 964
M+T + G FA VHDSYWTHA VD MN+ILR+KFV+++ P+LENLL SF++++P
Sbjct: 576 MLTCLEMADQGYTFASVHDSYWTHARTVDPMNQILRQKFVDMHSEPLLENLLASFRRNYP 635
Query: 965 KLNFPPLPERGDFDLREVLNSQYFFN 990
++FP +P+ D DL +VL S YFF+
Sbjct: 636 NVDFPDVPKSHDLDLSQVLESPYFFH 661
>Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoeba vermiformis
GN=mtRNAP PE=3 SV=1
Length = 992
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 323/899 (35%), Positives = 478/899 (53%), Gaps = 99/899 (11%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
K Q+ +E EA E AK+++EL++D+ + L L WF+PL + E+++
Sbjct: 149 KEQLYLEMEAVEREAKKFKELVDDVLKLNRGACLDPGTEFLLQWFQPLVKLLDLEKQLSL 208
Query: 196 KS---HRKMT------------------HAPYFNDLPADKMAVITMHKLMGLLMTNHNGI 234
H+++ HA + N++ +DK+AVI +H+L+G
Sbjct: 209 ADPGVHQELRASVEALGVLYNEQYLHEYHA-HTNEVASDKLAVIVIHELIGAAAGLKEQS 267
Query: 235 GCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDX 294
V+ QI EA++ E + L D
Sbjct: 268 PVRSVVQ---QISEAVQGE--------------------------------VNWQDLKDE 292
Query: 295 XXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGI----------IKGLDDWKPWGQEARAKV 344
S + +K ++V+ +K L W + + +
Sbjct: 293 LENPAESRATPDSAENPSGTVPAKKKKRVVNFTSVNRLNRRALKVLGSEALWSRGLKEFM 352
Query: 345 GCRVMQLLIETAYI--QSPVSQLGGSPPDIRPAFKHTFKTAM----ADSQKDIRRYGIIE 398
G R++ LL+ A + + PV+ + + RPAF+ + +T DS + R +
Sbjct: 353 GARLLALLLSVAQLREEDPVTGIFHA----RPAFEVSHRTQHRKEGMDSTHNPSRLSVSA 408
Query: 399 CDPLVTK--GLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAV 456
+ + + + + + Y PM +PP W D+G YL + + R ++Q +
Sbjct: 409 SEAVRARFDAMMTHFFHFIRQY-PMQIPPRPWDSPDRGGYLAVQVPIFRYQSYEEQFRPL 467
Query: 457 KRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXX 516
R + L I+E L++LG T WRI QR+ V+ + W GG LAD+ DR D
Sbjct: 468 FRKS-DDLAVIYEGLNALGETPWRIYQRVYHVVKRAWEQGGDLADIPDRRDKPYPMPTAL 526
Query: 517 XXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYP 576
+W RQ+K I + N + S R + LK+ VA K + K Y+PHN+DFRGR YP
Sbjct: 527 GKDS---RWYRQLKKIDQLNYDLVSLRADFLLKMEVAEKFMD-KTLYFPHNMDFRGRVYP 582
Query: 577 MHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENH 636
+ P+LNH+GSD+ RG+L FA+G+PLG+ GL WL+I LANLY G DK+ + R+ F +
Sbjct: 583 VPPHLNHMGSDMSRGLLWFADGKPLGERGLHWLRIQLANLY--GFDKVPFSDRLDFVSKN 640
Query: 637 LDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNG 696
D ++ A RPLE R WW+ A+ P Q LAAC A+ S P + +SH+P+ DG+CNG
Sbjct: 641 QDKIYSCAQRPLEDR-WWVAADSPWQFLAACFEYYNAMHSADPHSYVSHLPIQQDGTCNG 699
Query: 697 LQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXX 756
LQHYAALG D+ GA +VNL+ DRP DVYS +A V + + +DAE +
Sbjct: 700 LQHYAALGGDEQGAKSVNLLPSDRPQDVYSDVAELVAQRIHRDAE------NGVAVAQLS 753
Query: 757 XXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIED--DSELFSASCYAAKTTLT 814
+VDRK+VKQTVMTSVYGVT++GAR QI +K+ + D+E++ AS Y A+ T
Sbjct: 754 KGRVDRKVVKQTVMTSVYGVTFIGARQQITNAMKDHRLLTHLTDNEMYQASQYIAQLTFE 813
Query: 815 ALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS-IIKTSLQVL 873
+L+EMF AR+IM WLA CAK++A V WTTP+GLP VQPYR+ R+ ++T +Q +
Sbjct: 814 SLKEMFTGARNIMDWLATCAKLVAKKGRLVSWTTPLGLPVVQPYRRQSRTGTVETVVQSV 873
Query: 874 SLRRETDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACD 931
+L E K V RQ +AFPPNF+HSLD +HM++TA+ CK+ + +A VHDS+WTH
Sbjct: 874 ALEHEPTKWPVYSNRQRSAFPPNFIHSLDSTHMLLTAIHCKRQQITYASVHDSFWTHPAT 933
Query: 932 VDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
VD+MN ILREKFV+L+ PIL+ L E + + P + P LP G F+L V S YFF+
Sbjct: 934 VDDMNTILREKFVQLHGRPILKQLREYWTTTHPDIKSPELPALGKFNLHLVKESPYFFH 992
>R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squalens (strain
LYAD-421) GN=DICSQDRAFT_130383 PE=4 SV=1
Length = 1273
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/683 (41%), Positives = 405/683 (59%), Gaps = 59/683 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
W Q R KVG ++ +++ A + + + G + +PAF H+++ R+
Sbjct: 495 WSQLIRVKVGSFLLDCIMDVATVSRTIQDPRTGEKFTEEQPAFSHSYEYQRG------RK 548
Query: 394 YGIIECDPLVTKGLEKS--AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ 451
G+I+ +P V + K A + +LPMLV P W Y+ G YL+ S+ MR +++
Sbjct: 549 LGVIKFNPAVADRMSKDPIADTLHPRHLPMLVKPKPWLSYNNGGYLYSRSWAMRFKDSRE 608
Query: 452 QCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLV----DRD 506
Q ++ A +LE +F LD LG+T W+IN+R+ DV+ Q+W SG R A + D
Sbjct: 609 QEIYLRHASEAGRLELVFAGLDVLGSTPWQINRRVFDVVLQVWNSGERFAKIPPAIPDEP 668
Query: 507 DVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
+ + +RQ + M+ HS RC + K+ +AR + Y PH
Sbjct: 669 EPVRPENMDTDNKAKVVYLERQ-RQWMQNKAANHSDRCSVNYKVEIARAFLGDT-IYLPH 726
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
NVDFRGRAYP+ P+L+H+G DL RG+L F E +PLG GLRWLKIHLANLY G DK +
Sbjct: 727 NVDFRGRAYPIPPHLSHIGDDLSRGLLIFEEKKPLGTRGLRWLKIHLANLY--GYDKASF 784
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHV 686
+ RV + HL+D+FDSAD+PLEGRRWW +A+DP QCLA C+ L+ ALRSP PE +
Sbjct: 785 DERVEYVHKHLEDIFDSADKPLEGRRWWTKADDPWQCLATCMELTSALRSPDPEAYECGL 844
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GAA VNL DRP+DVY+ +A+ V + + +D +KD
Sbjct: 845 PVHQDGTCNGLQHYAALGGDAQGAAQVNLAAADRPSDVYTYVANMVEKQIEEDIKKD--- 901
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASC 806
+V RK+VKQTVMT+VYGVTYVGARDQI+R+LK+R I + +SAS
Sbjct: 902 ---DPIAKLLEGKVSRKVVKQTVMTTVYGVTYVGARDQIERQLKDRGDIPAEM-CWSASA 957
Query: 807 YAAKTTLTALEEMFEAARSIMSWLADCAKVIA----------STNEP------------- 843
Y AK L ++ ++F+ A+ I +WL CA++IA S EP
Sbjct: 958 YLAKNVLASIGDLFKGAKDIQNWLNLCARLIAKAIPQDRLVQSFTEPEKPNARSRKKEPR 1017
Query: 844 --------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFPP 893
V WTTP+GLP VQPYR + R + TS+Q + + T V ++Q++AFPP
Sbjct: 1018 WKKEQMTSVVWTTPLGLPIVQPYRAVKRKQVMTSIQTVFISDPTSPSTVNAQKQASAFPP 1077
Query: 894 NFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILE 953
NF+HSLD +HMM+TA+ C+ GL FA VHDSYWTHA +D+M+ I+R+ F+ L+ + +L+
Sbjct: 1078 NFIHSLDATHMMLTALECRARGLTFASVHDSYWTHASSIDQMSEIIRDTFIALHSSDVLK 1137
Query: 954 NLLESFQKSFPKLNFPPLPERGD 976
L + F++ + P + RG+
Sbjct: 1138 GLYDEFRERYADYKIPLVSLRGN 1160
>D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocystis hominis
GN=GSBLH_T00000052001 PE=3 SV=1
Length = 595
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/581 (46%), Positives = 364/581 (62%), Gaps = 15/581 (2%)
Query: 416 IPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLG 475
I Y PMLVPP W D G ++ + MRTHG+K Q + + +A L +F +L+ LG
Sbjct: 24 IRYKPMLVPPRPWLSVDSGGFISQKTVFMRTHGSKLQTDCLYQA---DLTSVFRSLNILG 80
Query: 476 NTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKE 535
W IN+ +L V +W +GG D+ R D+ +K+++ + I ++
Sbjct: 81 KVGWVINKDVLKVAEAVWENGGGELDIPSRTDLKMPDPSEFESE---KKYRKAMMKIKQK 137
Query: 536 NNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEF 595
N + HS RC++ KL +AR+ + + Y+P N+DFRGR YP+ P+LNHLG+DLCRG+L F
Sbjct: 138 NYDLHSLRCDLGYKLDIAREFQNDT-IYFPMNLDFRGRVYPIPPHLNHLGNDLCRGLLSF 196
Query: 596 AEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWL 655
A +PLG+ GL WLKI +ANLY G DK+ ++ R + + HL + +S PL WW
Sbjct: 197 ARKKPLGERGLFWLKIQVANLY--GNDKISFDDRSKWVDEHLPAIRESVRNPLAPNAWWK 254
Query: 656 EAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNL 715
E +DP Q LA C+ A+ SP PE +S++PVH DGSCNGLQHYAALG DK G VNL
Sbjct: 255 EGDDPWQLLATCMEYIRAIDSPHPEAYLSNIPVHQDGSCNGLQHYAALGLDKTGGTQVNL 314
Query: 716 VRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYG 775
V +P DVYS + V E + +D + +V+RK+VKQTVMTSVYG
Sbjct: 315 VPSSKPGDVYSAVLRIVKERIHEDLRNPDASIRAMAELLRGGEEVNRKVVKQTVMTSVYG 374
Query: 776 VTYVGARDQIKRRLKER----CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLA 831
VT+VGAR+QI+ +L R DD L++ S Y A TL ++ + A +IM+WL
Sbjct: 375 VTFVGAREQIEGQLNARRDDKKIDFDDDMLYALSMYLAGLTLGSIGVTNKGATTIMAWLN 434
Query: 832 DCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETD--KVLVKRQST 889
A +IA TN PV W TP+GLP VQPYR+ I T++Q + ++ D VL ++QS+
Sbjct: 435 KIAAIIAHTNSPVCWVTPLGLPVVQPYRKENVFHIATAMQDVQVKVNNDVLPVLTRKQSS 494
Query: 890 AFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEA 949
AFPPNFVHSLD +HMMMT++ C K +DFA VHDSYWTHACDVD MN +LRE+FV+LY
Sbjct: 495 AFPPNFVHSLDSTHMMMTSLVCDKYDMDFATVHDSYWTHACDVDTMNHLLREQFVKLYSQ 554
Query: 950 PILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
PILEN LES +P L FPP+PE+GD DL+ VL S YFFN
Sbjct: 555 PILENFLESLVIRYPSLTFPPIPEKGDLDLKCVLESPYFFN 595
>I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_29021 PE=3 SV=1
Length = 591
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/601 (45%), Positives = 370/601 (61%), Gaps = 41/601 (6%)
Query: 421 MLVPPNNWTRYDKGAYLFLPSYVMRTH----GAKQQCE-AVKRAPYNQLEPIFEALDSLG 475
ML+PP W +D G +L + +MR H G + E A +R PY L +++AL+++G
Sbjct: 1 MLIPPLPWRSHDSGGHLIMRGSIMRVHTYPKGVSRAIETAQERTPYG-LSRVYDALNAVG 59
Query: 476 NTKWRINQRLLDVISQIW---------------------TSGGRLADLVDRDDVXXXXXX 514
W IN+ +L V+ + W ++ R R +
Sbjct: 60 EVPWAINKPMLAVVERAWAAQLPICGLPVKYVDQKPQPKSTAKRFRTHHHRHQLQLLLTS 119
Query: 515 XXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRA 574
++ K + + K E HS RC++ LKL VA + K+E FY+PHN+DFRGRA
Sbjct: 120 QETGAERTKRMKGN-RLLNKRIRETHSLRCDLNLKLGVANEFKDELRFYFPHNLDFRGRA 178
Query: 575 YPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTE 634
YP+HP+LNH+G D+CRG+L FAE RPLG G+ WL + +AN + +DK+ +E R F +
Sbjct: 179 YPLHPHLNHMGPDVCRGLLTFAEARPLGPDGIGWLYVLIANSWGKSIDKMDFEGRRQFAQ 238
Query: 635 NHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSC 694
+L+ V DSA+RPL+G RWW + E P Q LAAC+ + +AL S P +S +PV +DGSC
Sbjct: 239 RNLEAVLDSAERPLDGHRWWTKGEKPWQLLAACMEVRDALASGNPAAYLSRLPVQIDGSC 298
Query: 695 NGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD-PETNSXXXXX 753
NGLQHYAALGRDK G +AVNL P DVY IA V +++ DAEK PE
Sbjct: 299 NGLQHYAALGRDKAGGSAVNLRPAPAPQDVYGEIAVEVNKMVAADAEKGVPEA------- 351
Query: 754 XXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTL 813
++RKLVKQTVMTSVYGVTYVGAR QI+ RL ER +D +L+ + YAA+ TL
Sbjct: 352 LALQGHINRKLVKQTVMTSVYGVTYVGARQQIQNRLLERGWSNND-QLYRCASYAARLTL 410
Query: 814 TALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVL 873
LEE F+ A IM WL CA ++AS V W TP+GLP +QPYR+ + +++T LQ L
Sbjct: 411 QGLEEKFDKAVGIMRWLGQCASIVASQGNAVAWHTPLGLPVLQPYREKYKHVVQTVLQRL 470
Query: 874 SLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACD 931
L RE VL +RQ +AFPPN+VHSLD +HMMMTA+ACK+AG+ FAGVHDS+WTHA D
Sbjct: 471 ILMQDREGLPVLRRRQKSAFPPNYVHSLDSTHMMMTALACKQAGIAFAGVHDSFWTHAGD 530
Query: 932 VDEMNRILREKFVELYEAPILENLLESFQKSFPKL--NFPPLPERGDFDLREVLNSQYFF 989
+ R LRE FVEL+ P+L LL + +P+L FPPLPE G+ DL EVL+++YFF
Sbjct: 531 TAVLARKLRETFVELHSQPLLAQLLSEMKVRYPELAQKFPPLPETGELDLNEVLDAEYFF 590
Query: 990 N 990
Sbjct: 591 G 591
>Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyostelium discoideum
GN=rpmA PE=2 SV=1
Length = 950
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/582 (45%), Positives = 372/582 (63%), Gaps = 26/582 (4%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTK 478
PM++ P W +G YL +MRT+G+ Q + + + I+ AL+ LG T
Sbjct: 385 FPMVIKPLPWITPTEGPYLHYKVPIMRTNGSAMQLRTLVDS---DMSLIYRALNILGETP 441
Query: 479 WRINQRLLDVISQIWTSGGRLADLVDRDD-----VXXXXXXXXXXXXXIRKWKRQVKTIM 533
W IN+ L +VI + W +GG + D+ R D + + K ++++K++
Sbjct: 442 WVINRDLYNVILEAWANGGNIGDIPKRTDFEYPEISDDMLFDHEARKELYKKEQRIKSL- 500
Query: 534 KENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGIL 593
N HS RC+ KL VARK + Y+PHN+DFRGR+YP+ P+LNHLGSD CR +L
Sbjct: 501 --NFNLHSLRCDTNYKLEVARKFLDHT-LYFPHNIDFRGRSYPIPPHLNHLGSDFCRSLL 557
Query: 594 EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRW 653
+F + PLG+ GL WLKIH+ANLY GVDK+ R+AFTE +++++FDS D PL G +W
Sbjct: 558 KFEKSLPLGEKGLEWLKIHVANLY--GVDKIPLNERLAFTERNMENIFDSVDSPLNGNKW 615
Query: 654 WLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAV 713
WL+A++P Q LAAC+ L++A+RS P +S++P+H DG+CNGLQHYAALG D GA V
Sbjct: 616 WLKADNPWQTLAACMELTKAIRSGKPAEFLSNLPIHQDGTCNGLQHYAALGGDVWGAEKV 675
Query: 714 NLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSV 773
NL+ D P DVYS +A V +I+ +DA+ E +VDRKLVKQTVMTSV
Sbjct: 676 NLLPSDCPQDVYSSVAQLVEQIVEEDAKNGDEI------AQFFLGKVDRKLVKQTVMTSV 729
Query: 774 YGVTYVGARDQIKRRLKERCAIEDDSE--LFSASCYAAKTTLTALEEMFEAARSIMSWLA 831
YGVTY+GAR+QI+ + E+ + D E +F +S Y K T +L MF ARSIM W++
Sbjct: 730 YGVTYIGAREQIENAILEKFSDLDLDEDFIFKSSTYITKNTFASLNNMFVGARSIMKWMS 789
Query: 832 DCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVL---VKRQS 888
DCA +IA + V W TP+GLP VQPY++ G+ I+T L+ + D +L RQ
Sbjct: 790 DCATLIAKSGHCVTWNTPLGLPVVQPYKKGGKYNIRT-LECDFIVVHNDDLLQVDSNRQR 848
Query: 889 TAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYE 948
+AFPPNF+HSLD +HM +TA+ C G+ ++ VHDSYWTHA VD MN ILR +FVEL++
Sbjct: 849 SAFPPNFIHSLDSTHMFLTAMTCYDQGITYSSVHDSYWTHASTVDRMNDILRNEFVELHK 908
Query: 949 APILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
PILE LLE FQ +P + FP LP++G+ D+ +V S+YFF+
Sbjct: 909 QPILERLLEWFQVRYPDIKFPKLPKKGELDINKVKESRYFFH 950
>M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_02746 PE=4 SV=1
Length = 1259
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 287/646 (44%), Positives = 387/646 (59%), Gaps = 35/646 (5%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYG 395
W +AK+G ++ +L+ A I + PAF HT++ R+ G
Sbjct: 494 WPVTVKAKIGSILVSILMHVAKIDVITETENENISQKTPAFYHTYQYQKG------RKLG 547
Query: 396 IIECDPLVTK--GLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC 453
+I+ + + K G + N+ LPMLV P W +D G Y S VMR+ + +Q
Sbjct: 548 VIKLNDQLMKQLGSQPLRGNIHPRLLPMLVEPKPWISWDSGGYYLSKSIVMRSRDSPEQI 607
Query: 454 EAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VDRDDVXX 510
+K A N L+ IFE LD LG+T W IN+ + DV+S++W SG A++ V+ D
Sbjct: 608 NYLKTASERNNLKSIFEGLDVLGSTAWAINRPVFDVVSEVWNSGQEFAEIPPVNSDITFP 667
Query: 511 XXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDF 570
I W+ K I ++ + S RC+I KL +AR EK Y+PHN+DF
Sbjct: 668 PQPTSKDPGERI-SWQVLCKQIARDAQNKQSIRCDINYKLEIARAFLHEK-MYFPHNLDF 725
Query: 571 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRV 630
RGRAYP+ P+ NHLG+DLCRG+L F E + +G+SGLRWLKIHLAN+ G DK + R
Sbjct: 726 RGRAYPIPPHFNHLGNDLCRGLLTFHEAKEIGESGLRWLKIHLANV--CGFDKESFIERE 783
Query: 631 AFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHM 690
AFT +L ++FDSAD PL+G RWWL +DP Q LAAC L+ ALRSP P S +PVH
Sbjct: 784 AFTTENLKNIFDSADNPLKGSRWWLTFDDPWQTLAACFELTAALRSPDPYKFKSRLPVHQ 843
Query: 691 DGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXX 750
DG+CNGLQHYAALG D LGA VNL +RP DVY+ +A V E ++KDA++
Sbjct: 844 DGTCNGLQHYAALGGDILGARQVNLEPSNRPYDVYTKVAELVNEQLQKDAKEG------N 897
Query: 751 XXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAK 810
++ RK+VKQTVMT+VYGVTYVGAR+QI +LK + + LF+ + Y AK
Sbjct: 898 HLAVLLQGKITRKIVKQTVMTNVYGVTYVGARNQILNQLKNINDLPREM-LFNLASYLAK 956
Query: 811 TTLTALEEMFEAARSIMSWLADCAKVIA-STN----------EPVRWTTPIGLPAVQPYR 859
T +L+ MF A I WL + AK I+ S N V WT+P+ LP VQPYR
Sbjct: 957 TVFFSLKSMFTGAHKIQEWLNEAAKRISKSINTSLSDDINLMTSVIWTSPLNLPIVQPYR 1016
Query: 860 QIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLD 917
++ R IKT+LQ + + + V ++Q TAFPPNF+HSLD +HM+M+AV+CK AGL
Sbjct: 1017 KLSRKQIKTNLQSIFITDPNNINPVDTRKQQTAFPPNFIHSLDATHMLMSAVSCKNAGLT 1076
Query: 918 FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
FA VHDSYWTHA D+D MN ILRE FV+L++ I+ENLL F++ +
Sbjct: 1077 FASVHDSYWTHAADIDNMNVILRETFVKLHKENIMENLLNEFRERY 1122
>L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillardia theta CCMP2712
GN=RpoTm PE=3 SV=1
Length = 1194
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/803 (38%), Positives = 453/803 (56%), Gaps = 81/803 (10%)
Query: 204 APYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENEARIXXXXXXX 263
P LPA K+AVIT+H+L+ L++ + R AA +GE I+ E +
Sbjct: 457 GPILMSLPASKIAVITIHELLSSLLSGGGQVHFVR---AARTVGEGIQAELGL------- 506
Query: 264 XXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQV 323
E A LS S+L K ++++
Sbjct: 507 ----------------EHVKKAKNRFLLSSRRL---------------SALCKAHDVRKL 535
Query: 324 MGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTA 383
++ L+ W + KVG +++Q+L+ +A + GS A H +
Sbjct: 536 NKLLSRLESQPLWDARMQVKVGAKLIQILMNSA-------KYKGSA-----AVTHVVQAQ 583
Query: 384 MADSQKDIRRYGIIECDPLVTKGLEK-----SAKNMVIPYLPMLVPPNNWTRYDKGAYLF 438
M S K +R+ G + D + + LEK +A N ++ LPM++ P W +D G Y+
Sbjct: 584 M--SNKGMRKKGFLALDQEILQDLEKQHDSVAAHNPLL--LPMIIRPFPWMSFDVGCYIQ 639
Query: 439 LPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR 498
+ VMR Q E+ + + L I+ ALD L T W IN+RLL+V+ W
Sbjct: 640 ARTKVMRIVDKGLQEESCRN---HDLSRIYAALDVLSGTGWCINRRLLNVVQHAWLDDMI 696
Query: 499 LADLVDRDD--VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKM 556
L ++ +DD V ++ R+ K + + N + HS RC + +L VA M
Sbjct: 697 LGEIPQKDDFAVPELDPDCIDAAESYSQY-REKKRVEQRNKDLHSLRCSLINQLHVATTM 755
Query: 557 KEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 616
+ K F++PHN+DFRGRAYP+ P+LNHLGSD+CRG+L+F++ +PLGK G WLK+HLANL
Sbjct: 756 SDFKEFFFPHNLDFRGRAYPIPPHLNHLGSDICRGLLKFSKKKPLGKKGFYWLKVHLANL 815
Query: 617 YAGGVDKLCYESRVAFTENHLDDVFDSADRPLEG--RRWWLEAEDPLQCLAACINLSEAL 674
+ G +K+ Y+ RV +TE + + SA PL+ R++WL A+DP Q LA + + EA+
Sbjct: 816 F--GENKISYDDRVKWTEERMSQILHSAKNPLDSASRKFWLSADDPWQALATSMEIQEAI 873
Query: 675 RSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLE 734
S P T +S++PVH DGSCNGLQHYAALG D++G VNLV G++P+D Y+ + +RVLE
Sbjct: 874 ESGDPSTYLSNLPVHQDGSCNGLQHYAALGLDEIGGEQVNLVPGEKPSDPYTTVCNRVLE 933
Query: 735 IMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA 794
+ D +DP +++ +V RK+VKQTVMT+VYGVT++GAR+QI RL E
Sbjct: 934 ALDMDL-RDP-SSADHEVSKLVDKRVSRKVVKQTVMTTVYGVTFIGAREQIYNRLYEAYG 991
Query: 795 IEDDSEL-----FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTP 849
I +EL + AS Y AK TL ++ +F AR M WL AK++AST +PVRWTTP
Sbjct: 992 IPGTNELQENDLYRASMYLAKLTLASVGNIFVGARKTMEWLTSVAKIVASTGQPVRWTTP 1051
Query: 850 IGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMT 907
+GLP VQPY + ++T++Q +SL + E + +Q TAFPPNFVHSLD +H++MT
Sbjct: 1052 LGLPVVQPYYKETMMSVETAVQNISLLKCDENGPINKLKQRTAFPPNFVHSLDSTHLLMT 1111
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN 967
A+ + G FAGVHDS+WTHACD +E+ +LRE+FV LY PIL +L SF++ +P +
Sbjct: 1112 AIEFDRRGKTFAGVHDSFWTHACDYEELALVLREQFVHLYTQPILNDLKNSFERDYPTIG 1171
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
P+P +G D+ V S YFF+
Sbjct: 1172 RLPVPLKGRLDINVVKQSPYFFS 1194
>D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_10289 PE=3 SV=1
Length = 1070
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 338/959 (35%), Positives = 471/959 (49%), Gaps = 158/959 (16%)
Query: 137 RQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKK 196
RQ+++E +E A +Y + + + + K L W + I +EQ+ K
Sbjct: 165 RQLRLECSVYEMAMDKYSASHDKVRQLGRSTSTNAAKDLITKWMPQAQKYIESEQKKIKS 224
Query: 197 ---SHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
S + P L D +A I M+ ++ + + G + I AL +G+A++ E
Sbjct: 225 GTHSTDSNIYGPALMLLRHDILAAIGMNIMLNMCLMESKG---PKFIKLALAMGKAVQEE 281
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
+ D +FY +N KL
Sbjct: 282 I----------ISKKETISKRYQDDDKFYLQVSKNIKLESL------------------- 312
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLG------- 366
+ +M++ + + G W + + KVG V+ + T Y+ + ++
Sbjct: 313 ---KMRMKEYVDSVGG------WDKRLQLKVGAAVVDCIQRTCYVPNEYGEVSTPELCAA 363
Query: 367 -GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDP-LVTKGLEKSAKNMVIP----YLP 420
G PP PAF H + + D RR G+I+ + L + V+P YLP
Sbjct: 364 KGLPPP-EPAFIHNY---VFDRN---RRAGVIQIHQRMADTVLATNPDANVLPWTARYLP 416
Query: 421 MLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWR 480
MLVPP WT G YL L + +MR + Q + V+R +++ I +AL+ + W
Sbjct: 417 MLVPPRPWTSVINGGYLKLRTKIMRQRDSAWQMDCVQRG---EMDGILKALNLMAEVPWV 473
Query: 481 INQRLLDVISQIWTSGGRLADLVDRD-------DVXXXXXXXXXXXXXIRKWKRQVKTIM 533
IN+ +LDV+ QIW GG DL R D +RK + + TI
Sbjct: 474 INKEVLDVVLQIWEDGGNFGDLPTRTDVPLPDPDSPEFADDPALYHKNVRKNQAHMMTIS 533
Query: 534 KE---------------------------------------NNERHSQRCEIELKLAVAR 554
N E HS RC+ KL VA
Sbjct: 534 TSCGFKLIATVSGHCLEVVGWIFLSLEPSERLLRWSLIEQLNREFHSLRCDTLYKLQVAE 593
Query: 555 KMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 614
+ K+E YYP+N+DFRGR YP+ P LNHLGSDL R +L F + +PLG+ GLRW+KIHLA
Sbjct: 594 EFKDEPELYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGERGLRWMKIHLA 653
Query: 615 NLYAGGVDKLCYESRVAFTENHLDDVFDSADRPL-EGR-RWWLEAEDPLQCLAACINLSE 672
N++ GVDK ++ RV F + HLD V SA PL EG WW A+ P L C L
Sbjct: 654 NVF--GVDKCSFDERVEFADAHLDKVVASASDPLGEGDCAWWKGADYPFLALGVCFELKR 711
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
A+ SP P +S++P+H DGSCNGLQHYAALGRD G A VNLV DRP+DVY G+A++V
Sbjct: 712 AIESPDPTQYMSNIPIHQDGSCNGLQHYAALGRDHSGGAQVNLVPADRPSDVYMGVATQV 771
Query: 733 LEIMRKDA-------------------EKDPETNSXXXXXXXXXXQ-------------V 760
+ + +DA ++ E+ S Q +
Sbjct: 772 MAKVERDAALEVPTVEEVRAMLAAVPDDESTESLSRRTKFRTLLDQAHRKKYAQFLDGII 831
Query: 761 DRKLVKQTVMTSVYGVTYVGARDQIKRRLKE----RCAIEDD---SELFSASCYAAKTTL 813
RK+VKQTVMTSVYGVTY+GAR QI RL E + I DD ++ ASCY A+ T+
Sbjct: 832 TRKVVKQTVMTSVYGVTYIGARKQISARLHETFLTKGHIMDDKLEDNIYHASCYCAELTM 891
Query: 814 TALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ-V 872
++ ++F +AR IM WLA CA + + +P+ W TP+GLP VQPYR ++T +Q V
Sbjct: 892 GSMGDLFTSARGIMGWLARCAGKVGESGQPMSWITPLGLPVVQPYRSKSTKQVRTKVQHV 951
Query: 873 LSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVAC-KKAGLDFAGVHDSYWTHACD 931
L + E V + RQ +AFPPNFVHSLD +HMM+TA C + + FA VHDSYWTHAC
Sbjct: 952 LMVDNEGRPVSIGRQKSAFPPNFVHSLDSTHMMLTARRCLEDEQISFAAVHDSYWTHACS 1011
Query: 932 VDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
VD MNR LRE+FV LYE P+LE+LL FP + F +P+ GD DL+ VL+S YFFN
Sbjct: 1012 VDIMNRRLREEFVNLYEQPLLEDLLTELHLRFPDMEFDDVPQLGDLDLQSVLDSPYFFN 1070
>M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidioschyzon merolae
strain 10D GN=CYME_CMJ257C PE=3 SV=1
Length = 1252
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 291/689 (42%), Positives = 406/689 (58%), Gaps = 56/689 (8%)
Query: 332 DWKPWGQEARAKVGCRVMQLLIETA--YIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQK 389
D W KVG ++ +++ A +I +P + AF+H ++ Q+
Sbjct: 590 DTATWDDSVTIKVGSVLISFVMKHALIHIDTPTGKQAVQ------AFRHGYRPL----QR 639
Query: 390 DIRRYGIIECDPLVTKGL---EKSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
+ R+ G+IE V L E + ++P + PMLVPP WT Y+ G YL VMR
Sbjct: 640 EPRKVGVIELHKSVLNLLLANESDLRETILPRFQPMLVPPRPWTAYNSGGYLRPRGLVMR 699
Query: 446 THGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
G++ Q EA+K+ L +F L++LG T WRIN+ +LDV+ ++W +GG +A LV R
Sbjct: 700 VRGSRLQLEALKK---GDLSEVFAGLNALGATPWRINRPVLDVVEKLWRAGGDIAGLVAR 756
Query: 506 DDVXXXX-------------XXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
D+ R+ +R + I K N ERH+ RCE+ +L
Sbjct: 757 ADLQLPALAESVVDPAPDGKESAASTESLSREQRRAIWRIRKTNRERHALRCELHYRLET 816
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA-EGRPLGKSGLRWLKI 611
AR+ + FY PHN+DFRGRAYPM +L+H+ SD+CRG+L FA G +G+ GL W+K+
Sbjct: 817 AREFADVSRFYLPHNLDFRGRAYPMPSHLHHMSSDVCRGLLTFAGPGLRVGERGLFWMKV 876
Query: 612 HLANLYAGGVDKLCYESRVAFTENHLDDVF-----DSADRPLEGRRWWLEAEDPLQCLAA 666
HLANL G+DKL ++ RVAF E+ + V +AD LE WW + EDP Q LAA
Sbjct: 877 HLANLC--GMDKLPFDERVAFAESVMPKVLAVAAAPTADSNLE---WWAQQEDPFQLLAA 931
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
C L+ A P+ S +P+ DGSCNGLQHYAALGRD+ G VNL+ +RP DVYS
Sbjct: 932 CFELAAAKGGLDPDYH-STLPIQQDGSCNGLQHYAALGRDERGGYQVNLLPSERPQDVYS 990
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
G+A V E + DA + ++ RK+VKQTVMTSVYGVT +GAR+QI+
Sbjct: 991 GVAELVRERVAHDAREG------VPIAQLLQGRISRKIVKQTVMTSVYGVTLIGAREQIQ 1044
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNE---P 843
RL+E ++ + + AS Y AK TL +L ++F A M WLA+CA +A++ E
Sbjct: 1045 NRLRELPDFPEE-KTWEASFYLAKQTLGSLGDIFRGATDTMEWLAECALRVATSKERTNA 1103
Query: 844 VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVKR--QSTAFPPNFVHSLDG 901
VRW TP+GLP +QPYR+ ++ T +Q + L + D + V R Q +AFPPN++HSLD
Sbjct: 1104 VRWITPLGLPVIQPYRRREARLVNTVVQHVLLEAQNDHLPVSRARQRSAFPPNYIHSLDS 1163
Query: 902 SHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQK 961
+HM+MTA+AC++AGL FA VHDS+WTHA VDEMNR+LRE FV L+ +L+ L E FQ
Sbjct: 1164 THMLMTALACRRAGLQFAAVHDSFWTHAATVDEMNRLLRECFVRLHARDLLQELREQFQL 1223
Query: 962 SFPKLNFPPLPERGDFDLREVLNSQYFFN 990
FP + PP+P +G DL +VL S YFF+
Sbjct: 1224 RFPDVELPPVPPKGTLDLNQVLLSPYFFD 1252
>H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytophthora ramorum
PE=3 SV=1
Length = 999
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 337/942 (35%), Positives = 461/942 (48%), Gaps = 141/942 (14%)
Query: 137 RQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQE---V 193
RQ+++E +E A +Y E + + K L W + + AEQ+
Sbjct: 111 RQLRLECSVYEMAMDKYSSSHEKVRQLGRSTETNAAKELIRKWMPQTEKYVDAEQKKIKA 170
Query: 194 CKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQIGEAIENE 253
K S + P L D +A M+ ++ + + G + I AL +G+A++ E
Sbjct: 171 GKHSTDSNIYGPALMLLKPDVLAATGMNIMLNMCLMEAKG---PKFIKLALAMGKAVQEE 227
Query: 254 ARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSS 313
+FY A E KL
Sbjct: 228 IITRKEAMAKRNNGDA---------DKFYLNATEYIKLESL------------------- 259
Query: 314 LIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYI-------QSPVSQLG 366
+ +M+ + + G W + + KVG V+ + T Y+ +P
Sbjct: 260 ---KTRMKDYIDTVGG------WDKRLQLKVGAAVVDCIQRTCYVPNEFGDVSTPELCAA 310
Query: 367 GSPPDIRPAFKHTFKTAMADSQKDIRRYGIIEC-DPLVTKGLEKSAKNMVIP----YLPM 421
P PAF H + + D RR G+I+ + L S V+P YLPM
Sbjct: 311 KGLPAPEPAFIHNY---VFDRN---RRAGVIQIHQKMADTVLATSPDANVLPWTARYLPM 364
Query: 422 LVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRI 481
LVPP W G YL L + +MR + Q + V+R + I AL+ + + W I
Sbjct: 365 LVPPRPWDGIVNGGYLKLRTKIMRQRDSAWQMDCVQRG---DMGGILTALNLMADVPWVI 421
Query: 482 NQRLLDVISQIWTSGGRLADLVDRDDVX-------XXXXXXXXXXXXIRKWKRQVKT--- 531
N+ +L+V+ Q+W GG DL R DV +RK + + T
Sbjct: 422 NKEVLNVVLQVWEDGGNFGDLPTRTDVPLPDPESPEFKEDPALYYKNVRKNQAHMMTPYV 481
Query: 532 ------------------IMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGR 573
I + N E HS RC+ KL VA + K+E YYP+N+DFRGR
Sbjct: 482 MWVQTACKSKRLLLGGWWIEQLNREFHSLRCDTLYKLQVAEEFKDEPALYYPYNMDFRGR 541
Query: 574 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFT 633
YP+ P LNHLGSDL R +L F + +PLG+ GLRW+KIHLAN++ GVDK ++ RV F
Sbjct: 542 VYPIPPNLNHLGSDLSRSLLIFRDRKPLGEHGLRWMKIHLANVF--GVDKCSFDERVVFA 599
Query: 634 ENHLDDVFDSADRPL-EG-RRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMD 691
+ HLD V SA PL EG WW A+ P L C L A+ SP P S++P+H D
Sbjct: 600 DAHLDKVMASASDPLGEGDSAWWKGADYPFLALGVCFELKRAIESPDPTQYESNIPIHQD 659
Query: 692 GSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD-------- 743
GSCNGLQHYAALGRD+ G VNLV RP+DVY G+A++V+ + DAE D
Sbjct: 660 GSCNGLQHYAALGRDRRGGEQVNLVPAPRPSDVYMGVATQVMAKVEHDAEVDLPSVEEVR 719
Query: 744 ------PETNSXXXXXXXXXXQ------------------VDRKLVKQTVMTSVYGVTYV 779
P+ NS + + RK+VKQTVMTSVYGVTY+
Sbjct: 720 AMIADVPDDNSQESLSRKTKLRTLLDQAQRKKNAQFLHGIITRKVVKQTVMTSVYGVTYI 779
Query: 780 GARDQIKRRLKERC---------AIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWL 830
GAR QI RL E +EDD ++ ASCY A+ T+ ++ ++F +ARSIM+WL
Sbjct: 780 GARKQISARLHETFLTKGHIMDEKLEDD--IYHASCYCAELTMGSMGDLFNSARSIMAWL 837
Query: 831 ADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ-VLSLRRETDKVLVKRQST 889
A CA + + +P+ W TP+GLP VQPYR ++T +Q VL + E V + RQ +
Sbjct: 838 AKCAAKVGESGQPMSWITPLGLPVVQPYRSKSTKQVRTKVQHVLMVDNEGRPVSIGRQKS 897
Query: 890 AFPPNFVHSLDGSHMMMTAVAC-KKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYE 948
AFPPNFVHSLD +HMM+TA C + + FA VHDSYWTHAC VD MNR LRE+FV LYE
Sbjct: 898 AFPPNFVHSLDSTHMMLTARRCLEDDNIAFAAVHDSYWTHACSVDTMNRRLREEFVGLYE 957
Query: 949 APILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
P+LE+LL + FP + F +PE G+ DL VL S YFFN
Sbjct: 958 QPLLEDLLTELRLRFPDMEFDDVPELGNLDLHSVLESPYFFN 999
>M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed RNA polymerase
RPO41 OS=Pseudozyma antarctica T-34 GN=PANT_12c00137 PE=4
SV=1
Length = 1509
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 322/915 (35%), Positives = 481/915 (52%), Gaps = 138/915 (15%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKL-----VPNLPYMKSLFLGWFEPLKSAIVAE 190
+RQ +E A E A K + E + E L + + P K ++ W+ L++A+ +
Sbjct: 509 ERQKWLEHSAVEAARKRLEHSAEKLEELGLQTTGALQSKPLQKWMW-DWYNKLQTALNKD 567
Query: 191 QEVCKKSHRKMTHA------------PYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA- 237
+ + H P+ LP K+A+IT+ +LM M+ + G+
Sbjct: 568 LDRLDSDLKNDVHTSKAMLPIEQQMLPFLRLLPVSKLALITVLELM--RMSGNGGVSDGM 625
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAI--ENGKL-SDX 294
+ A LQ+G AIE E YH+ + +N K+ +
Sbjct: 626 KTTRALLQVGRAIETE----------------------------YHSEVIRKNPKIFQNA 657
Query: 295 XXXXXXXXXXXXXXXXXSSLIKQ-QKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLI 353
IK+ QK Q+ G+I + W Q RA+VG ++Q L+
Sbjct: 658 QAAQAALKKRGLVDFAARREIKEWQKQQEEQGVISSIPKWT---QITRARVGSYLVQHLM 714
Query: 354 ETAYIQSPVSQLGGSP-PDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAK 412
+ A + + G + +PAF T++ ++ G+I+ + +V K L+K +
Sbjct: 715 QVATVNRKATDRDGILWEEDQPAFYSTYQYLGG------KKLGVIKLNEVVAKRLDKDSI 768
Query: 413 NMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFE 469
+ + +LPMLVPP WT +D G Y + MR + +Q ++ A N L+ +
Sbjct: 769 SETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLA 828
Query: 470 ALDSLGNTKWRINQRLLDVISQIWTSGGRLADL----------VDRDDVXXXXXXXXXXX 519
ALD LGNT W+IN+ + DV+ ++W SG +AD+ V D+
Sbjct: 829 ALDVLGNTSWKINKPIFDVMLEVWNSGKDIADMPPMEMETPEPVKPDNYDHDIKARSVYL 888
Query: 520 XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHP 579
+++W +Q + HSQRC++ KL +AR E+ FY+PHN+DFRGRAYPM P
Sbjct: 889 QRLKQWNQQ-------RSSNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPP 940
Query: 580 YLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDD 639
+LNH+G+DLCRG+L FA+ +PLGK+GLRWL+IH++N++ G DK + R F +H D
Sbjct: 941 HLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIHISNVF--GYDKASFGEREQFAIDHEAD 998
Query: 640 VFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT-PETTISHVPVHMDGSCNGLQ 698
+ DS +RPL+G RWWL+A+DP QCLAAC+ L AL P PE S +PVH DG+CNGLQ
Sbjct: 999 IRDSVERPLDGNRWWLKADDPWQCLAACMELRAALDHPEGPEAYESCLPVHQDGTCNGLQ 1058
Query: 699 HYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXX 758
HYAALG D GA VNL GDRPADVYSG+A V++++ ++A K T
Sbjct: 1059 HYAALGGDLAGAKQVNLSGGDRPADVYSGVADLVIKVLDEEAAKGDRT------AKILQG 1112
Query: 759 QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEE 818
+V RK+VKQTVMT+VYGVT++GA++Q+ R+L +R + + +LF+A+ + AK ++ +
Sbjct: 1113 KVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE-DLFNAASFLAKVIMSCIGN 1171
Query: 819 MFEAARSIMSWLADCAKVIAST---------------NEP-------------------- 843
+F A+ I WL+ AKVIA + NE
Sbjct: 1172 LFSGAQKIQDWLSFSAKVIAKSIPGQRVEEATRPYLPNEANLRRADVRGFSRDPAKADRI 1231
Query: 844 -------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRE--TDKVLVKRQSTAFPPN 894
V WTT +GLP VQPYR+ + + TS+Q + + +V +Q++AFPPN
Sbjct: 1232 AKEQMTSVIWTTALGLPVVQPYRKAKKRQVSTSMQTVFINDPLLNAEVSPAKQASAFPPN 1291
Query: 895 FVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 954
F+HSLD +HM++TA+ C AGL FA VHDSYWTHA D+D M+ ++RE FV L+ IL
Sbjct: 1292 FIHSLDATHMILTALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILYR 1351
Query: 955 LLESFQKSFPKLNFP 969
L E F + + P
Sbjct: 1352 LREEFLQRYEGYKVP 1366
>A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, whole genome
shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00037338001 PE=4 SV=1
Length = 1035
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/575 (44%), Positives = 363/575 (63%), Gaps = 12/575 (2%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTK 478
LPM+ PP W G Y P+ ++R Q EA KRA L+ +++ LD++
Sbjct: 468 LPMIYPPAKWMDTQIGGYYLKPTNLIRIQDQSLQEEAAKRA---NLQNLYDILDNISKVA 524
Query: 479 WRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNE 538
WR+N ++L++ Q+W GG +A++ R + K Q+ +++ +
Sbjct: 525 WRVNNKVLNIAMQVWEQGGGIAEVPKRQHDKTYVFEHQIKECKSYEEKYQLLKMIQSQRD 584
Query: 539 RHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 598
+S +C+ LKL VA + Y+PHN+DFRGR YP+ P+LNH+G D+ RG+LEF+EG
Sbjct: 585 LYSLQCDFTLKLGVALAFNGCQKIYFPHNMDFRGRLYPIPPHLNHMGPDIARGLLEFSEG 644
Query: 599 RPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAE 658
+ LGKSGLRWLKIHLAN G DKL E R A+ + ++D + A+ P++ + W + E
Sbjct: 645 KKLGKSGLRWLKIHLAN--KMGKDKLSMEDREAYVDQNVDSIIKCAEDPIKYQDW-AQLE 701
Query: 659 DPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRG 718
D Q LAA + A++SP PE SH+ VH DGSCNGLQHYAALGRD GA VNL
Sbjct: 702 DAWQSLAAMFDYVAAIKSPNPEEYESHLHVHQDGSCNGLQHYAALGRDVEGATQVNLANT 761
Query: 719 DRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTY 778
+P DVY+ +A V + DA KD + Q+ RK+VKQTVMTSVYGVT+
Sbjct: 762 SKPGDVYTHVAGMVERRVEFDA-KD-SLSKDHIIALKLQNQIKRKIVKQTVMTSVYGVTF 819
Query: 779 VGARDQIKRRLKERCAIEDDSEL-FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
+GAR+QI R+LK++ I +D L + AS Y A+ TL A++++FE A I WL CA +I
Sbjct: 820 IGAREQIHRQLKDKGIIGEDEHLQYQASIYLARITLDAIKDLFEGAHKIKQWLIKCATII 879
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGR-SIIKTSLQVLSLRRETDKVLVKR--QSTAFPPN 894
++ N+PV W TP+GLP +QPYR + + +KT + +S+ + + + + Q +AFPPN
Sbjct: 880 SNENQPVSWITPLGLPVIQPYRSLNKYDEVKTLISNVSIESDAAYLPINKVKQRSAFPPN 939
Query: 895 FVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 954
F+HSLD +H+M +++ C K G+ FA VHDSYWTHAC+VD++N +LRE+FV L+ P+LE+
Sbjct: 940 FIHSLDSTHLMYSSIECLKQGITFAAVHDSYWTHACNVDKLNELLREQFVRLHSQPLLED 999
Query: 955 LLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
L +SFQ+ FP L FPP+PERG FDL +V S YFF
Sbjct: 1000 LRDSFQRRFPHLEFPPIPERGQFDLEKVKQSVYFF 1034
>K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_261459 PE=3 SV=1
Length = 1324
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/671 (40%), Positives = 393/671 (58%), Gaps = 54/671 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI-QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY 394
W Q R +VG ++ L++ A + ++ + + G + +PAF H+++ ++
Sbjct: 552 WTQTIRVRVGSFLVDALMDVATVSRTAIDKHGELHTEEQPAFYHSYEYLRG------QKL 605
Query: 395 GIIECDPLVTKGLEKS-AKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
G+I+ +P+V L K + + P +LPMLV P W +D+G YL+ + VMR +++Q
Sbjct: 606 GVIKLNPVVADRLAKDQVRETLHPRHLPMLVRPKPWLSHDQGGYLYNKTSVMRYKDSREQ 665
Query: 453 CEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLAD----LVDRDD 507
V+ A LE ++ +LD LG T W+IN+ + DV+ ++W SG RL + D+ +
Sbjct: 666 QSYVREASSQGALELVYASLDVLGGTPWKINRHIFDVVLKVWNSGERLGKIPPAMYDQPE 725
Query: 508 VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
+ +R K M + HS RC K+ +AR + Y PHN
Sbjct: 726 PEKPADHDTDPKAKVAYLQRH-KAYMSKKANNHSDRCNTNYKIEIARAFLGDT-VYLPHN 783
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
VDFRGRAYP+ P LNHLG DL RG+L+FAE +PLG+ GLRW+KIHLANLY G DK ++
Sbjct: 784 VDFRGRAYPIPPNLNHLGDDLSRGLLKFAEAKPLGERGLRWMKIHLANLY--GYDKASFD 841
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
RV F HLDD+FDSA PLEGR WW +A+DP QCLA C+ + AL SP P S +P
Sbjct: 842 ERVVFVHEHLDDIFDSATNPLEGRGWWKKADDPWQCLATCMEIRAALESPEPTEYASSLP 901
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETN 747
VH DG+CNGLQHYAALG D GA VNL DRP+DVY+ +A+ V ++ +DA+ D
Sbjct: 902 VHQDGTCNGLQHYAALGGDAQGAQQVNLSVTDRPSDVYTHVATMVESVLAQDAKND---- 957
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCY 807
++ RK+VKQTVMT+VYGVT++GARDQI+R+L++R + + E + A+ Y
Sbjct: 958 --LRYAKMLSGKIARKVVKQTVMTTVYGVTFIGARDQIERQLRDRRDLPAE-ECWLAAAY 1014
Query: 808 AAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR---------------------- 845
AK TL + ++F A+ I +WL AK+I+ + P R
Sbjct: 1015 LAKITLACIGDLFTGAKHIQNWLNLSAKLISKSIPPERIEEATKPSAKKGRVETRLKKEQ 1074
Query: 846 -----WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK--RQSTAFPPNFVHS 898
WTTP+GLP VQPYRQ R I T+LQ + + V +Q++AFPPNF+HS
Sbjct: 1075 MTSVIWTTPLGLPIVQPYRQTKRKQIHTALQTVFISDPNVPAAVNSTKQASAFPPNFIHS 1134
Query: 899 LDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLES 958
LD +HMM+TA+ C+ + FA VHDSYWTHAC VDEM+ I+RE F+ L+ + ++ L E
Sbjct: 1135 LDATHMMLTALQCRNRDITFASVHDSYWTHACSVDEMSEIIRETFIALHSSDVMAKLDEE 1194
Query: 959 FQKSFPKLNFP 969
F++ + P
Sbjct: 1195 FRERYKGYKVP 1205
>R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_006120 PE=4 SV=1
Length = 1544
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 302/822 (36%), Positives = 449/822 (54%), Gaps = 106/822 (12%)
Query: 205 PYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA-RVIHAALQIGEAIENEARIXXXXXXX 263
P+ LPA K+A+IT+ +LM M+ + G+ + A LQ+G AIE E
Sbjct: 612 PFLRLLPASKLALITILELM--RMSGNGGVSDGMKTTRALLQVGRAIEME---------- 659
Query: 264 XXXXXXXXXXXEEPDGEFYHAAI--ENGKL-SDXXXXXXXXXXXXXXXXXXSSLIKQ-QK 319
YH+ + +N K+ + IK QK
Sbjct: 660 ------------------YHSEVVRKNPKIFQNAHTAQTTLRKRGLIDLAARREIKAWQK 701
Query: 320 MQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP-PDIRPAFKH 378
Q+ G++ + W Q RA+VG ++Q L+ A + + G + +PAF
Sbjct: 702 QQEDEGVLSSIPRWT---QTIRARVGSYLVQHLMHVATVNRKATDRDGVLWEEDQPAFYS 758
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAY 436
T++ ++ G+I+ + ++ K L+K S + + P +LPMLVPP WT +D G Y
Sbjct: 759 TYQYLGG------KKLGVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGY 812
Query: 437 LFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+ MR + +Q ++ A N L+ + ALD LGNT W+IN+ + DV++++W S
Sbjct: 813 YSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMTEVWNS 872
Query: 496 GGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNER---HSQRCEIELKLAV 552
G +AD+ I+ ++ + + N +R HSQRC++ KL +
Sbjct: 873 GKDIADMPPVQMEAQEPQKPDNYDHDIKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEI 932
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
AR E+ FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L FA+ +PLGK+GLRWL+IH
Sbjct: 933 ARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLLFADSKPLGKAGLRWLRIH 991
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
++N++ G DK + R F +H D+ DS +RPL+G RWWL+A+DP QCL+AC+ L
Sbjct: 992 ISNVF--GYDKASFAEREQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLSACMELKA 1049
Query: 673 ALRSPT-PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASR 731
AL P PE S +PVH DG+CNGLQHYAALG D GA VNL RG+RPADVYSG+A
Sbjct: 1050 ALEHPEGPEAYGSCLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGERPADVYSGVADL 1109
Query: 732 VLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 791
V++ + ++A K +V RK+VKQTVMT+VYGVT++GA++Q+ R+L +
Sbjct: 1110 VIKALDEEAAK------GERLAGILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLAD 1163
Query: 792 RCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST----------- 840
R + + +LF+A+ Y AK ++ + +F A+ I WL+ AKVIA +
Sbjct: 1164 RGDVPAE-DLFAAASYLAKVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPAQRVEEATR 1222
Query: 841 ------------------NEPVR-------------WTTPIGLPAVQPYRQIGRSIIKTS 869
+P + WTT +GLP VQPYR+ + + T+
Sbjct: 1223 PYQPSESSLKRADVHGFARDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKSKKKQVSTA 1282
Query: 870 LQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWT 927
+Q + + +V +Q++AFPPNF+HSLD +HM++TA+ C AGL FA VHDSYWT
Sbjct: 1283 MQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDATHMILTALECHAAGLTFASVHDSYWT 1342
Query: 928 HACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
HA D+D M+ ++RE FV L+ IL L E F + + P
Sbjct: 1343 HAADIDTMSDMIRETFVRLHSQDILHRLREEFLQRYAGYKVP 1384
>D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarpus siliculosus
GN=Esi_0208_0042 PE=3 SV=1
Length = 1167
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 290/721 (40%), Positives = 409/721 (56%), Gaps = 78/721 (10%)
Query: 336 WGQEARAKVGCRVMQLLIETA-------------------YIQSPVSQLGGSPPDIRPAF 376
W A+ K+G +++LLIETA G P + AF
Sbjct: 459 WPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMP-KAAF 517
Query: 377 KHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP-YLPMLVPPNNWTRYDKGA 435
H K+ R+ + + +K +++ + P ++PMLVPP +W + ++G
Sbjct: 518 VHDIIKG-----KNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWIKPNRGG 572
Query: 436 YLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+L L + +MRT G Q A++RA Q +++AL+ LG +WRIN +LD +
Sbjct: 573 FLRLRAQIMRTKGEAAQKHALRRADLRQ---VYKALNCLGKVRWRINGHVLDTVMVCLRD 629
Query: 496 GGRLADL----------------VDRDDVXXXXXXXXXXXXXIRK--------WKRQVKT 531
+ DL VDR + K +KR ++
Sbjct: 630 KIAVGDLPVIKDLPLPPRPDGVTVDRLGRLRAPVQGEHEDEEVFKERRQKHYAYKRLLEK 689
Query: 532 IMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRG 591
++N HS RC++++K+ +A++ ++ Y+P+N+DFRGR YP+ P LN LGSD RG
Sbjct: 690 TKQKNANMHSLRCDMKIKVDIAQEFRDHV-IYFPYNMDFRGRTYPIPPNLNILGSDFSRG 748
Query: 592 ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLD----DVFDSADRP 647
+L F E +PLG+ GL WLK+HLANLY G DK+ ++ RVAF E H+D +V DSA RP
Sbjct: 749 VLVFDEAKPLGEKGLYWLKVHLANLY--GEDKVSFDDRVAFVEKHMDESWREVRDSALRP 806
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
LEG WW +A+ P QCLA C +L+ AL SP P +S +PVH DGSCNGLQHYAALG D
Sbjct: 807 LEGECWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDA 866
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQ------VD 761
G A VNL P DVYSG+ V + + +A P + +D
Sbjct: 867 NGGAQVNLSPSPEPQDVYSGVCDVVKKKVALEASTVPPEGASVVDLANHEIAKMVDGLID 926
Query: 762 RKLVKQTVMTSVYGVTYVGARDQIKRRLKERC----------AIEDDSELFSASCYAAKT 811
RK+VKQTVMTSVYGVT+VGAR QI+ L ++ + E + ++ AS Y AK
Sbjct: 927 RKVVKQTVMTSVYGVTFVGARAQIQNVLGDKMIGHTDESGVPSAEVEENVYKASAYVAKH 986
Query: 812 TLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
T+T LEE+F AR+ M WL ++++A ++P+ W TP+GLP +QPYR+ ++T LQ
Sbjct: 987 TMTVLEELFTEARNTMDWLKAVSQLVAKEDQPMSWITPLGLPVLQPYRRTDTYQVQTLLQ 1046
Query: 872 VLSLRRETDK--VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ +R ++DK V VKRQ+TAFPPNFVHSLD +HMMMTA+ K G+ FA VHDSYW HA
Sbjct: 1047 GVHIREDSDKLPVAVKRQTTAFPPNFVHSLDSTHMMMTAIEMDKVGVPFAAVHDSYWVHA 1106
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
+VD MN LR+ FV+LY PILE+L +S + +P ++FPP+PERG L V +S+YFF
Sbjct: 1107 GNVDVMNDKLRQCFVDLYSGPILEDLHDSLRMRYPTIDFPPIPERGTLVLDSVKDSKYFF 1166
Query: 990 N 990
N
Sbjct: 1167 N 1167
>J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_01835 PE=3 SV=1
Length = 1321
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/688 (40%), Positives = 401/688 (58%), Gaps = 68/688 (9%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPV--SQLGGSPPDIRPAFKHTFKTAMADS 387
+DW W Q R KVG ++ L++ A + + G + + +PAF H+++
Sbjct: 531 EDWTTDWTQVVRVKVGSFLVDALMDVATVMRTGVDKRTGEAISEEQPAFFHSYEY----- 585
Query: 388 QKDIRRY--GIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYV 443
+R Y G+I+ +PL+++ + K S + + P +LPMLV P W +D+G YL+ ++V
Sbjct: 586 ---LRGYKLGVIKLNPLISEKMAKESIRETLHPRHLPMLVKPKPWLSHDQGGYLYNKTWV 642
Query: 444 MRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL 502
MR +++Q ++ A LE I+ +LD LGNT W+IN+R+ D++ ++W SG R +
Sbjct: 643 MRFKESQEQQSYLRHASSLGNLELIYASLDVLGNTPWKINRRIFDIVLEVWNSGTRWCKI 702
Query: 503 ----VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKE 558
D + + RQ + + N HS RC + K+ +AR
Sbjct: 703 PPAAFDAPEPEKPENFDTDPRAKMIYLTRQKQYALGRANN-HSDRCSVNYKIEIARAFLG 761
Query: 559 EKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYA 618
+ Y+PHNVDFRGRAYP+ P+L+H+G DL RG+L F E +PLG+ GLRWLKIHLANLY
Sbjct: 762 DT-IYFPHNVDFRGRAYPLPPHLSHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY- 819
Query: 619 GGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT 678
G DK ++ RV+F +HLDD+FDSAD PLEG++WW +A+DP QCLA CI L AL+SP
Sbjct: 820 -GYDKANFDERVSFVHDHLDDIFDSADNPLEGKKWWTKADDPWQCLATCIELKAALQSPD 878
Query: 679 PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRK 738
P T +PVH DG+CNGLQHYAALG D GA VNL DRP+DVY+ +A V + M +
Sbjct: 879 PHTYECALPVHQDGTCNGLQHYAALGGDAQGARQVNLDVTDRPSDVYTFVAEMVEKAMEE 938
Query: 739 DAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDD 798
D + D ++ RK+VKQTVMT+VYGVT++GAR+QI+++LK+R I +
Sbjct: 939 DVKLD------HKYAKMLTGKISRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRGDIAAE 992
Query: 799 SELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR------------- 845
E + A+ Y AK L + ++F+ A+ I +WL CA++IA + P R
Sbjct: 993 -ECWLAASYVAKKVLLCIGDLFKGAKDIQTWLNSCARLIAKSIPPDRLDAATDVERTFGT 1051
Query: 846 ----------------------WTTPIGLPAVQPYRQIGRSIIKTSLQV--LSLRRETDK 881
WTTP+GLP VQPYR R I TSLQ +S
Sbjct: 1052 GRKMVKSTEATRLKKEQMTSVVWTTPLGLPIVQPYRATRRKQIITSLQTVFISDPNSPTS 1111
Query: 882 VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILRE 941
V +Q++AFPPNF+HSLD +HMM+TA+ CK G+ FA VHDSYWTH +D+M+ I+R+
Sbjct: 1112 VNASKQASAFPPNFIHSLDATHMMLTALECKTQGVTFASVHDSYWTHPSSIDQMSTIIRD 1171
Query: 942 KFVELYEAPILENLLESFQKSFPKLNFP 969
F+ L+ + +L L + F + + P
Sbjct: 1172 TFIALHSSDVLGKLGDEFLQRYKGYKIP 1199
>M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2299 PE=4 SV=1
Length = 1312
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/674 (41%), Positives = 394/674 (58%), Gaps = 59/674 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP-PDIRPAFKHTFKTAMADSQKDIRRY 394
W Q RA+VG ++ L+ A ++ G + +PAF ++ ++
Sbjct: 575 WTQIIRARVGSYLVHQLLSVATVKRQAYDREGELWEEEQPAFYSAYEYIQG------KKL 628
Query: 395 GIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
G+I + +V++ L+K S + + P +LPMLVPP W +D G Y + + MR + +Q
Sbjct: 629 GVIRLNEVVSQRLDKESVRETLHPRHLPMLVPPRPWLTHDSGGYFSVKTSAMRYKDSVEQ 688
Query: 453 CEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXX 511
++ A N LE + LD LGNT W +N+ + DV+ Q+W SG LADL +
Sbjct: 689 SSYLRAASANNGLEVVLAGLDVLGNTAWNVNREVFDVVLQVWNSGEALADLPPAEMTDPE 748
Query: 512 XXXXXXXXXXIR----KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
+ + RQ +I N HSQRC+I KL +AR EK FY+PHN
Sbjct: 749 PERPPPDDIKAKGIYLQRLRQWNSIRASN---HSQRCDINYKLEIARSFLGEK-FYFPHN 804
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P+LNH+G+DLCRG+L+FAE +PLG++GLRWL IHLAN++ G DK +
Sbjct: 805 MDFRGRAYPIPPHLNHIGNDLCRGLLKFAEAKPLGEAGLRWLHIHLANVW--GYDKASFA 862
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR-SPTPETTISHV 686
R FT+ H D V DSA RPLEG RWWL+A+DP QCLA CI L++A + PE S +
Sbjct: 863 EREEFTKRHADLVKDSATRPLEGERWWLQADDPWQCLATCIELNKAWNYADGPEAFPSQL 922
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+G+A V+E + K AE ET
Sbjct: 923 PVHQDGTCNGLQHYAALGGDLQGAKQVNLRGGDRPADVYTGVAELVIEQLSKRAEAGDET 982
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASC 806
+V RK+VKQTVMT+VYGVT++GA++Q+ R+L +R + + EL+SA+
Sbjct: 983 ------AQLLCGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE-ELWSAAS 1035
Query: 807 YAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR--------------------- 845
Y AK + + +F A I WL A++IA + P R
Sbjct: 1036 YLAKVIMDCIGNLFSGANLIQDWLTVSARLIAKSIPPERIAQAQLRTDKAGKRSSSTREG 1095
Query: 846 --------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNF 895
WT+ +GLP VQPYR+I + I T++Q + +R + +V +Q++AFPPNF
Sbjct: 1096 REQMTSVIWTSALGLPVVQPYRKIKKHQITTAVQSVYIRDPNQNYEVNPSKQASAFPPNF 1155
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
+HSLD +HM +TA+ C AGL FA VHDSYWTHACD+D M+ I+R+ FV L+ IL L
Sbjct: 1156 IHSLDATHMFLTALECHSAGLVFASVHDSYWTHACDIDTMSDIIRDTFVRLHSQDILVRL 1215
Query: 956 LESFQKSFPKLNFP 969
+ F + + P
Sbjct: 1216 RDEFLQRYKGYKIP 1229
>B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 576
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/574 (44%), Positives = 363/574 (63%), Gaps = 21/574 (3%)
Query: 420 PMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKW 479
PM+VPP W+R D+G Y L + ++R HG Q E ++ L +F+ L++LG W
Sbjct: 19 PMIVPPKPWSRPDEGGYKMLRTELLRYHGCNMQKEVLQNV---DLSIVFDGLNALGRVPW 75
Query: 480 RINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNER 539
RINQR+L V + W + L D+ +DD + W+ + T E+ +
Sbjct: 76 RINQRVLTVAQRCWDNNIPLGDIPSKDDNPLPEEPLHPKRQE-QFWEPE--TPGYESYDL 132
Query: 540 HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 599
S RC LKL A K KE + ++P+N+DFRGRAYP+ P+L+++GSDLCRG+L+FAE +
Sbjct: 133 RSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPHLSNVGSDLCRGVLKFAEAK 192
Query: 600 PLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAED 659
PLG GL WLK+HLAN G DK+ ++ RV F +++L+ V SA+ P G RWW+ ED
Sbjct: 193 PLGPRGLYWLKVHLANF--AGKDKMSFDDRVKFVDDNLEQVRLSAEDPFAGERWWMSLED 250
Query: 660 PLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGD 719
P Q LA C+ + +A+ PE+ + +PVHMDGSCNGLQHYAALGRD +G AVNL D
Sbjct: 251 PFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHYAALGRDSVGGKAVNLCAYD 310
Query: 720 RPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYV 779
P DVY G+ V + RK+ S +DR +VK+TVMTSVYGVTY+
Sbjct: 311 EPQDVYVGVMHEV--VRRKEL-------SYNRAAKLVNGLIDRGVVKRTVMTSVYGVTYI 361
Query: 780 GARDQIKRRLKERCAIEDD--SELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
GAR QI+ ++ + D+ +E+F A Y A T+ + ++F AR M+WL CA++I
Sbjct: 362 GARQQIQEKIISKGHDVDEMSNEIFQACGYVASLTMEVMGDLFTGARETMNWLTTCARMI 421
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFPPNF 895
P+ W +PIGLPA+QPYRQ + I T LQ ++L E+D + + +RQ +AFPPNF
Sbjct: 422 TQHGFPLAWVSPIGLPAIQPYRQKKAATIVTLLQTVTLINESDDLPIHKQRQVSAFPPNF 481
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
+HSLD SHM++TA+ + GL F+ VHDS+WTHACD+DEMN LR+ FV+LY P+LE L
Sbjct: 482 IHSLDSSHMLLTALEMDRRGLTFSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERL 541
Query: 956 LESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
++++ +P+L FP +P+RGD +L EV ++YFF
Sbjct: 542 KQTWEMRYPELEFPDIPKRGDLNLAEVKQAKYFF 575
>Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/682 (40%), Positives = 398/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WRIN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLAAC L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLAACFELAAALRSPDP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ + + +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYYIP 1067
>E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr10944 PE=3 SV=1
Length = 1551
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 300/822 (36%), Positives = 450/822 (54%), Gaps = 106/822 (12%)
Query: 205 PYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA-RVIHAALQIGEAIENEARIXXXXXXX 263
P+ + L K+A+IT+ +LM M+ + G+ + A L +G AIE E
Sbjct: 625 PFLHLLSPAKLALITILELM--RMSGNGGVSDGMKTTRALLAVGRAIEME---------- 672
Query: 264 XXXXXXXXXXXEEPDGEFYHAAI--ENGKL-SDXXXXXXXXXXXXXXXXXXSSLIKQQKM 320
YH+ + +N K+ S+ IK +M
Sbjct: 673 ------------------YHSEVVRKNPKIFSNAHAAQATLRKRGLIDLAARREIKAWQM 714
Query: 321 QQVM-GIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP-PDIRPAFKH 378
QQ G++ + W Q RA+VG ++Q L+ A + + G + +PAF
Sbjct: 715 QQEEEGVLSSIPRWT---QPVRARVGSYLVQHLMHVATVNRKATDRDGVLWEEDQPAFYS 771
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAY 436
T++ ++ G+I+ + ++ K L+K S + + P +LPMLVPP WT +D G Y
Sbjct: 772 TYQYLGG------KKLGVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGY 825
Query: 437 LFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+ MR + +Q ++ A N L+ + ALD LGNT W+IN+ + DV+ ++W S
Sbjct: 826 YSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNS 885
Query: 496 GGRLADL--VDRDDVXXXXXXXXXXXXXIRK-WKRQVKTIMKENNERHSQRCEIELKLAV 552
G LAD+ ++ D R + +++K ++ HSQRC++ KL +
Sbjct: 886 GEDLADMPPIEMDAPEPQKPDNYDHDMKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEI 945
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
AR E+ FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L FA+ +PLGK+GLRWL+IH
Sbjct: 946 ARAYVGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIH 1004
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
++N++ G DK + R F +H D+ DS +RPL+G RWWL+A+DP QCLA+C+ L
Sbjct: 1005 ISNVF--GYDKASFAEREQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLASCMELKA 1062
Query: 673 ALRSPT-PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASR 731
AL P PE S +PVH DG+CNGLQHYAALG D GA VNL RG++PADVYSG+A
Sbjct: 1063 ALEHPEGPEAYESSLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGEKPADVYSGVADL 1122
Query: 732 VLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 791
V++++ +A K S +V RK+VKQTVMT+VYGVT++GA++Q+ R+L +
Sbjct: 1123 VIKVLDDEAAKGDRLAS------ILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLAD 1176
Query: 792 RCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAS------------ 839
R + + +LF+A+ + AK ++ + +F A+ I WL+ AKVIA
Sbjct: 1177 RGDVPAE-DLFAAASHLAKVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPAQRLEEATR 1235
Query: 840 -----------------TNEPVR-------------WTTPIGLPAVQPYRQIGRSIIKTS 869
+ +P + WTT +GLP VQPYR+ + + T+
Sbjct: 1236 PYMPSETALKRADARGFSRDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKSKKKQVSTA 1295
Query: 870 LQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWT 927
+Q + + +V +Q++AFPPNF+HSLD +HM++TA+ C AGL FA VHDSYWT
Sbjct: 1296 MQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDATHMILTALECHAAGLTFASVHDSYWT 1355
Query: 928 HACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
HA D+D M+ ++RE FV L+ IL L E F + + P
Sbjct: 1356 HAADIDTMSDMIRETFVRLHSQDILHRLREEFLQRYAGYKVP 1397
>B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodactylum tricornutum
(strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 1188
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/612 (41%), Positives = 368/612 (60%), Gaps = 47/612 (7%)
Query: 420 PMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKW 479
PM+VPP W+R D+G Y L + ++R HG Q E ++ L +F+ L++LG W
Sbjct: 581 PMIVPPKPWSRPDEGGYKMLRTELLRYHGCNMQKEVLQNV---DLSIVFDGLNALGRVPW 637
Query: 480 RINQRLLDVISQIWTSGGRLADLVDRDD-------------------VXXXXXXXXXXXX 520
RINQR+L V + W + L D+ +DD
Sbjct: 638 RINQRVLTVAQRCWDNNIPLGDIPSKDDNPLPEEPLHPKRQEQFWEPETPGYESYVEEYR 697
Query: 521 XIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPY 580
R+ + + + + N + S RC LKL A K KE + ++P+N+DFRGRAYP+ P+
Sbjct: 698 LYRESWNKFRRVKQRNMDLRSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPH 757
Query: 581 LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDV 640
L+++GSDLCRG+L+FAE +PLG GL WLK+HLAN G DK+ ++ RV F +++L+ V
Sbjct: 758 LSNVGSDLCRGVLKFAEAKPLGPRGLYWLKVHLANF--AGKDKMSFDDRVKFVDDNLEQV 815
Query: 641 FDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHY 700
SA+ P G RWW+ EDP Q LA C+ + +A+ PE+ + +PVHMDGSCNGLQHY
Sbjct: 816 RLSAEDPFAGERWWMSLEDPFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHY 875
Query: 701 AALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK--DPETNSXXXXXXXXXX 758
AALGRD +G AVNL D P DVY G+ V+ + +AE+ D +T+
Sbjct: 876 AALGRDSVGGKAVNLCAYDEPQDVYVGVMHEVVRRVAAEAERQLDFDTSDLESLSRKQKK 935
Query: 759 Q-------------VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI------EDDS 799
+ +DR +VK+TVMTSVYGVTY+GAR QI+ ++ + E +
Sbjct: 936 ELSYNRAAKLVNGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIISKLEAQGHDVDEMSN 995
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYR 859
E+F A Y A T+ + ++F AR M+WL CA++I P+ W +PIGLPA+QPYR
Sbjct: 996 EIFQACGYVASLTMEVMGDLFTGARETMNWLTTCARMITQHGFPLAWVSPIGLPAIQPYR 1055
Query: 860 QIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLD 917
Q + I T LQ ++L E+D + + +RQ +AFPPNF+HSLD SHM++TA+ + GL
Sbjct: 1056 QKKAATIVTLLQTVTLINESDDLPIHKQRQVSAFPPNFIHSLDSSHMLLTALEMDRRGLT 1115
Query: 918 FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDF 977
F+ VHDS+WTHACD+DEMN LR+ FV+LY P+LE L ++++ +P+L FP +P+RGD
Sbjct: 1116 FSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKRGDL 1175
Query: 978 DLREVLNSQYFF 989
+L EV ++YFF
Sbjct: 1176 NLAEVKQAKYFF 1187
>F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 398/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WRIN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL+ A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLSTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ + + +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYYIP 1067
>Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM02493.1 PE=3 SV=1
Length = 1566
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 318/907 (35%), Positives = 480/907 (52%), Gaps = 122/907 (13%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKL-----VPNLPYMKSLFLGWFEPLKSAIVAE 190
+RQ +E A E A K + E + E L + + P + ++ W+ L+ + E
Sbjct: 552 ERQKWLEHSALEAARKRLEHSAEKLEELGLQTTGALQSKPLQRWMW-DWYNKLQVTLNQE 610
Query: 191 -----QEVCKKSHRK-------MTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCAR 238
QEV + H + + P+ LPA K+A+IT+ +LM + N + +
Sbjct: 611 LARLDQEVNENKHDRKAMLPMELQILPFLRLLPASKLALITILELM-RMSGNGDVSDGMK 669
Query: 239 VIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAI--ENGKLSDXXX 296
A LQ+G AIE E YH+ I +N K+
Sbjct: 670 TTRAVLQVGRAIEME----------------------------YHSDIVRKNPKIFQNAY 701
Query: 297 XXXXXXXXXXXXXXXS--SLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIE 354
+ + QK Q+ G++ + W Q RA+VG ++Q L+
Sbjct: 702 TAQTTLRKRGLIDLAARREIKAWQKQQEDEGVLSSIPSWT---QTVRARVGSYLVQHLMN 758
Query: 355 TAYIQSPVSQLGGSP-PDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEK-SAK 412
A + + G + +PAF T++ ++ G+I+ + ++ + L+K S +
Sbjct: 759 VATVNRKATDRDGVLWEEDQPAFYSTYQYLGG------KKLGVIKLNEVIARRLDKDSIQ 812
Query: 413 NMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEA 470
+ P +LPMLVPP WT +D G Y + MR + +Q ++ A N L+ + A
Sbjct: 813 ETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRYKDSAEQGSYLRVASDNGDLDTVLAA 872
Query: 471 LDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVK 530
LD LGNT W+IN+ + DV+ ++W SG +AD+ + I+ ++
Sbjct: 873 LDVLGNTSWKINKPIFDVMLEVWNSGKDIADMPPVEMEVPEPQKPDNYDHDIKARSVYLQ 932
Query: 531 TIMKENNER---HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
+ + N +R HSQRC++ KL +AR E+ FY+PHN+DFRGRAYPM P+LNH+G+D
Sbjct: 933 RLKQWNQQRASNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGND 991
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
LCRG+L FA+ +PLGK+GLRWL+IH++N++ G DK + R F +H D+ DS +RP
Sbjct: 992 LCRGLLLFADSKPLGKAGLRWLRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERP 1049
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEAL-RSPTPETTISHVPVHMDGSCNGLQHYAALGRD 706
L+G WWL+A+DP QCLAAC+ L AL + PE S +PVH DG+CNGLQHYAALG D
Sbjct: 1050 LDGNCWWLKADDPWQCLAACMELKAALEHAEGPEAYESCLPVHQDGTCNGLQHYAALGGD 1109
Query: 707 KLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVK 766
GA VNL RG+RPADVYSG+A V++++ ++A K S +V RK+VK
Sbjct: 1110 LAGAKQVNLSRGERPADVYSGVADLVIKVLDEEAAKGERLAS------ILQGKVTRKVVK 1163
Query: 767 QTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSI 826
QTVMT+VYGVT++GA++Q+ R+L +R + + +LF+A+ + AK ++ + +F A+ I
Sbjct: 1164 QTVMTTVYGVTFIGAKNQVMRQLADRGDVPAE-DLFAAASFLAKVIMSCIGNLFSGAQKI 1222
Query: 827 MSWLADCAKVIAST---------------NE---------------------------PV 844
WL+ AKVIA + NE V
Sbjct: 1223 QDWLSFSAKVIAKSIPAQRLEEATRPYQPNESTLKRADARGFSRDPAKADRIVKEQMTSV 1282
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGS 902
WTT +GLP VQPYR+ + + T++Q + + +V +Q++AFPPNF+HSLD +
Sbjct: 1283 IWTTALGLPVVQPYRKSKKKQVSTAMQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDAT 1342
Query: 903 HMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKS 962
HM++TA+ C AGL FA VHDSYWTHA D+D M+ ++RE FV L+ IL L E F +
Sbjct: 1343 HMILTALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILYRLREEFLQR 1402
Query: 963 FPKLNFP 969
+ P
Sbjct: 1403 YAGYKVP 1409
>F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/682 (40%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WRIN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDVIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYYIP 1067
>Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/682 (40%), Positives = 398/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WRIN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP+P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPSP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>G9HRK4_9SPIT (tr|G9HRK4) DNA-dependent RNA polymerase family protein OS=Oxytricha
trifallax GN=OXYTRI_21845 PE=4 SV=1
Length = 1305
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/581 (44%), Positives = 365/581 (62%), Gaps = 27/581 (4%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK---QQCEAVKRAPYNQLEPIFEALDSLG 475
LPM+ P W + G Y Y+ +T AK EA K L + + LD LG
Sbjct: 743 LPMIYQPAPWKNFTFGGY-----YLKQTKMAKVIPNFKEAQKYLQRVDLTNMCQVLDILG 797
Query: 476 NTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKE 535
+ KWRIN+R+L++I +W+ GG L ++ R + K K ++KE
Sbjct: 798 SVKWRINRRILEIIEYVWSIGGGLGEVPKRFNDRQITPEMIKETNFREKLK-----LLKE 852
Query: 536 ---NNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 592
N E H+ RCE L+L++A+ K Y+PHN+DFRGR YP+ P+LNH+G+D+ RG+
Sbjct: 853 HQKNRETHALRCEFLLRLSIAQSFKHVNQIYFPHNMDFRGRVYPIPPHLNHMGADVNRGL 912
Query: 593 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRR 652
L+FAEG+PLGK GL WLK+H++N G DKL R A+ E+ +D + AD P +
Sbjct: 913 LQFAEGQPLGKDGLFWLKVHVSN--KIGKDKLPIVDRAAYAESEMDMIHRCADDP-KNNL 969
Query: 653 WWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAA 712
WL++++P Q L+A I LS+A+R PE IS+ VH+DGSCNG+QHYAALGRD GA
Sbjct: 970 DWLQSDNPWQTLSAMIELSQAVRCKNPEEYISYQHVHVDGSCNGMQHYAALGRDDRGARQ 1029
Query: 713 VNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTS 772
VNL +RP DVY+ I V+E + + ++ + V+RK +KQTVMTS
Sbjct: 1030 VNLADSERPGDVYTAILRLVIEHIENEQDQ-----ALHEVAEGLKGNVNRKTIKQTVMTS 1084
Query: 773 VYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLAD 832
VYGVT++GAR QI+R+LK+R E + EL+ AS Y AK T+ + ++F A +I W +
Sbjct: 1085 VYGVTFIGARKQIQRQLKDRKLYETNGELYKASQYLAKVTIKCIGDLFRDANNIKEWFSK 1144
Query: 833 CAKVIASTNEPVRWTTPIGLPAVQPYRQI-GRSIIKTSLQVLSLRRETDK--VLVKRQST 889
CAKV+ASTNEPVRW TP+GLP VQPY+ + +S+IKT LQ +++ D V ++Q++
Sbjct: 1145 CAKVVASTNEPVRWITPLGLPCVQPYKSVSNQSVIKTILQQITVADSLDDQPVNKQKQNS 1204
Query: 890 AFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEA 949
AFPPNFVHSLD +HMM TA+ CK+ G+ FA VHDS+W H ++ EMN LR++FV L+ +
Sbjct: 1205 AFPPNFVHSLDSTHMMYTALECKRKGIVFAAVHDSFWAHPSNITEMNATLRQQFVTLHGS 1264
Query: 950 PILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+LENL E+F +P FP +P+RG FDL EV S YFF+
Sbjct: 1265 SVLENLYENFTSRYPNEKFPEIPKRGSFDLNEVRKSTYFFS 1305
>J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_03513 PE=3 SV=1
Length = 1321
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/674 (40%), Positives = 403/674 (59%), Gaps = 67/674 (9%)
Query: 335 PWGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKD 390
PW + +G +++ LI+TA + P++ G + +PAF H+F+
Sbjct: 554 PWSGMVQMSIGTHLVEALIKTARVVRHGTDPLT--GEQVTEKQPAFAHSFEYVRG----- 606
Query: 391 IRRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHG 448
R+ G+I+ +P+V K L + VI +LPMLVPPN+W +++G YL +P+ +MR
Sbjct: 607 -RKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNSWKAWNQGPYLTIPTTMMRFKD 665
Query: 449 AKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL---VD 504
+ +Q ++ A + LEP+F LD L +T WRIN+ + +V+ + W G +AD+ +
Sbjct: 666 SVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAE 725
Query: 505 RDDVXXXXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
+ ++ R ++ + +K + + + H++RC+ L +AR + FY
Sbjct: 726 KCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYINDV-FY 784
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GLRWL+IHLANLY G DK
Sbjct: 785 IPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY--GYDK 842
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
++ RV F+++H++D+FDSAD PL+G+RWWL+AEDP QCLAAC L+ ALRS P
Sbjct: 843 ASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDPSKFE 902
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
S +PVH DG+CNG+QHYAALG D GA AVNL +GDRPAD+YS + + V E + D +K
Sbjct: 903 SSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEADQKKG 962
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFS 803
T + RK+VKQTVMT+VYGVT+VGARDQI ++L+ R + D +++
Sbjct: 963 VPT------ALLIKNPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSD-DVWI 1015
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI--------------ASTNEP------ 843
S Y AK L ++ +F AR+I WL + A+++ A T P
Sbjct: 1016 TSAYIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRGPRPG 1075
Query: 844 ----------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQV--LSLRRETDKVLVK 885
V WT+P+GLP VQPYR+ + + TS+Q +S +V +
Sbjct: 1076 PKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRKPIKKQVMTSMQTVFISDPNAPSEVSPQ 1135
Query: 886 RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVE 945
+Q+TAFPPNFVHSLD +HM++TAVAC +A + FA VHDSYWTHA V+ M+ ++R+ F+
Sbjct: 1136 KQATAFPPNFVHSLDATHMLLTAVACNQANITFASVHDSYWTHASTVEPMSEVIRDSFIH 1195
Query: 946 LYEAPILENLLESF 959
L+ I+ L E F
Sbjct: 1196 LHSNDIIGKLREEF 1209
>Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1202
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1202
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_60184 PE=3 SV=1
Length = 1086
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/685 (40%), Positives = 394/685 (57%), Gaps = 67/685 (9%)
Query: 335 PWGQEARAKVGCRVMQLLIETAYIQ-SPVSQLGGSP-PDIRPAFKHTFKTAMADSQKDIR 392
PW RA+VG ++ L++TA +Q + V + G + +PAF H+++ +
Sbjct: 268 PWSVHTRARVGGVLIDCLMDTAKVQRTAVDKNDGKILTEEQPAFYHSYEYVQG------Q 321
Query: 393 RYGIIECDPLVTKGLEKS-AKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK 450
R G+I+ + V + + V P +LPMLV P W Y+ G YL+ +Y MR G++
Sbjct: 322 RLGVIKLNQEVAAHMANEWTIDTVHPRHLPMLVKPKPWLNYNDGGYLYHKTYAMRFKGSR 381
Query: 451 QQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VDRDD 507
+Q +K A Q E ++ LD LG+T W+IN+++ DV+ ++W G R L D+
Sbjct: 382 EQQAYLKHASDAGQCELVYAGLDVLGSTPWKINRKIFDVVLEVWNRGDRWGKLPPATFDE 441
Query: 508 VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
W +K + HS RC + K+ +AR E FY PHN
Sbjct: 442 PEPEALSPDADSRKRADWSHAMKLYNQAKQSNHSHRCSVNYKIEIARTFLGET-FYQPHN 500
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P+LNH+G DL RG+L FAE +PLG+ G RWLKIH+ANLY G DK ++
Sbjct: 501 LDFRGRAYPVPPHLNHIGDDLSRGLLMFAEKKPLGERGFRWLKIHIANLY--GFDKASFD 558
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
RV + E+ L DV+DSA+ P+ G+RWWLEA+DP QCLAA + L +A+ S P S +P
Sbjct: 559 ERVQWVEDRLADVYDSANNPINGKRWWLEADDPWQCLAASMELRDAIESGNPLAFESSLP 618
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK-DPET 746
VH DG+CNGLQHYAALG D GAA VNL + DRP+DVY+ + V IM +D +K DP
Sbjct: 619 VHQDGTCNGLQHYAALGGDPEGAAQVNLQKADRPSDVYTYVGRMVERIMEEDEKKGDP-- 676
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASC 806
++ RK+VKQTVMT+VYGVT++GARDQI+R+L++R I + + A+
Sbjct: 677 -----MAILLKGKISRKVVKQTVMTTVYGVTFIGARDQIERQLRDRKDIPPE-HCWGAAT 730
Query: 807 YAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NE----------- 842
Y A+ L + ++F A+ IM+WL CA++IA + NE
Sbjct: 731 YLARKVLACIGDLFYGAKHIMTWLNLCARLIAKSIPMDRLQEMIVAENEQAKAKQDKRKR 790
Query: 843 ----------------PVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETD--KVLV 884
V WTTP+GLP QPYR+ R +KT+LQ + + +V
Sbjct: 791 KDLGSKHKVLKREQMTSVVWTTPMGLPIAQPYRKATRKQVKTALQTVLITDPNSLAEVNS 850
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
+Q+TAFPPNF+HSLD +HMM+TA+ C++ GL FA VHDSYWTHAC +D+M+ I+R+ F+
Sbjct: 851 SKQATAFPPNFIHSLDATHMMLTALECRQQGLTFASVHDSYWTHACSIDQMSGIIRDTFI 910
Query: 945 ELYEAPILENLLESFQKSFPKLNFP 969
L+ + +L L + F + P
Sbjct: 911 ALHSSDVLMRLHKEFLTRYANYKIP 935
>Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1180
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1180
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1180
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1202
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNQKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTNTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain CBS 8904) GN=A1Q2_04313 PE=3 SV=1
Length = 1321
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/674 (40%), Positives = 402/674 (59%), Gaps = 67/674 (9%)
Query: 335 PWGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKD 390
PW + +G +++ LI+TA + P++ G + +PAF H+F+
Sbjct: 554 PWSGMVQMSIGTHLVEALIKTARVVRHGTDPLT--GEQVTEKQPAFAHSFEYVRG----- 606
Query: 391 IRRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHG 448
R+ G+I+ +P+V K L + VI +LPMLVPPN W +++G YL +P+ +MR
Sbjct: 607 -RKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNPWKAWNQGPYLTIPTTMMRFKD 665
Query: 449 AKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL---VD 504
+ +Q ++ A + LEP+F LD L +T WRIN+ + +V+ + W G +AD+ +
Sbjct: 666 SVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAE 725
Query: 505 RDDVXXXXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
+ ++ R ++ + +K + + + H++RC+ L +AR + FY
Sbjct: 726 KCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYINDV-FY 784
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GLRWL+IHLANLY G DK
Sbjct: 785 IPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY--GYDK 842
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
++ RV F+++H++D+FDSAD PL+G+RWWL+AEDP QCLAAC L+ ALRS P
Sbjct: 843 ASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDPSKFE 902
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
S +PVH DG+CNG+QHYAALG D GA AVNL +GDRPAD+YS + + V E + D +K
Sbjct: 903 SSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEADQKKG 962
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFS 803
T + RK+VKQTVMT+VYGVT+VGARDQI ++L+ R + D +++
Sbjct: 963 VPT------ALLIKNPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSD-DVWI 1015
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI--------------ASTNEP------ 843
S Y AK L ++ +F AR+I WL + A+++ A T P
Sbjct: 1016 TSAYIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRGPRPG 1075
Query: 844 ----------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQV--LSLRRETDKVLVK 885
V WT+P+GLP VQPYR+ + + TS+Q +S +V +
Sbjct: 1076 PKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRKPIKKQVMTSMQTVFISDPNAPSEVSPQ 1135
Query: 886 RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVE 945
+Q+TAFPPNFVHSLD +HM++TAVAC +A + FA VHDSYWTHA V+ M+ ++R+ F+
Sbjct: 1136 KQATAFPPNFVHSLDATHMLLTAVACNQANITFASVHDSYWTHASTVEPMSEVIRDSFIH 1195
Query: 946 LYEAPILENLLESF 959
L+ I+ L E F
Sbjct: 1196 LHSNDIIGKLREEF 1209
>Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=2
Length = 1202
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/682 (40%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 I-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPIP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+YSG V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYSG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo05575 PE=3
SV=1
Length = 1375
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/670 (41%), Positives = 393/670 (58%), Gaps = 63/670 (9%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYG 395
W + RA++G + L ETA IQ G +I+PAF T++ + ++ G
Sbjct: 591 WSHQTRARIGAMCLHFLCETAKIQRSAVIDGQEIIEIQPAFVQTYQFSAG------QKIG 644
Query: 396 IIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC 453
II+ + VT+ L+K S + + P YLPMLVPP WT ++KGAYL P V+R + +Q
Sbjct: 645 IIKFNAAVTERLDKDSMLSTLTPRYLPMLVPPRPWTAHNKGAYLMHPVSVLRIKDSMEQT 704
Query: 454 EAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXX 512
+K+A QL+ F +LD LG+T W +N+ + VI+ W SG + + D +
Sbjct: 705 AYLKQASDSGQLDEAFASLDYLGSTAWNVNRDVFGVIASAWNSGLTIGGIPVADPLNAIK 764
Query: 513 XXXXXXXXXIRKWKR-----QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
++ +VK + + +S RC++ KL +AR E+ FY+PHN
Sbjct: 765 DPEPPAGGFTSPRQQDTHRAEVKAAEMQRRQHYSIRCDLNYKLEIARAYLNER-FYFPHN 823
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P L+H+G DLCRG+L FAE + LG +GLRWL +HLAN++ G DK
Sbjct: 824 MDFRGRAYPIPPNLSHIGDDLCRGLLTFAERKRLGATGLRWLHVHLANMF--GFDKASLA 881
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
+R F ++HL D+FDSAD+PL+G RWWL+AE+P QCLA C LS+ALRSP PE S +P
Sbjct: 882 AREQFAKDHLTDIFDSADKPLDGARWWLKAEEPWQCLATCFELSKALRSPVPEDYRSSLP 941
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETN 747
V DGSCNGLQHYAALG D GA VNL+ GD P+DVY+G+ + V+ + +DA E
Sbjct: 942 VQQDGSCNGLQHYAALGGDMAGAGQVNLIAGDAPSDVYTGVCNLVIGAVEQDAANKNE-- 999
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL-FSASC 806
++ RK++KQTVMT+VYGVTY+GA QI+R+LK+R + D+E+ +
Sbjct: 1000 ----LALHLKGKITRKVIKQTVMTTVYGVTYIGASRQIERQLKDRGDV--DAEVRHKCAL 1053
Query: 807 YAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-----NEPVR---------------- 845
Y + TL ++ +F A +I WL C ++I+ + +E V+
Sbjct: 1054 YLTEKTLQSIGTLFAGAAAIQLWLTTCGRLISKSIPGDRHELVKATQSKSEQNKLKKKQS 1113
Query: 846 --------------WTTPIGLPAVQPYRQIGRSIIKTSLQV--LSLRRETDKVLVKRQST 889
WTTPIGLP QPYR+ R +KT +Q +S + +V ++Q++
Sbjct: 1114 SKDMLAREQMTTVVWTTPIGLPVAQPYRKQQRKQVKTVVQTVFISDPQTPTQVDSRQQTS 1173
Query: 890 AFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEA 949
AFPPNF+HSLD SH+M+TA CK+ GL FA VHDS+WTHA DVD M LR FV+L+
Sbjct: 1174 AFPPNFIHSLDASHLMLTAGRCKRRGLTFASVHDSFWTHAADVDVMATELRAAFVDLHAQ 1233
Query: 950 PILENLLESF 959
ILE+L F
Sbjct: 1234 DILESLRREF 1243
>Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=1
Length = 1180
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 I-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ + FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNVAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_12740 PE=3 SV=1
Length = 1536
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/829 (35%), Positives = 445/829 (53%), Gaps = 120/829 (14%)
Query: 205 PYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA-RVIHAALQIGEAIENEARIXXXXXXX 263
P+ +P K+A+IT+ ++M M+ + G+ + A L +G AIE E
Sbjct: 600 PFLRLVPVSKLALITILEIM--RMSGNGGVADGMKTTRALLAVGRAIEME---------- 647
Query: 264 XXXXXXXXXXXEEPDGEFYHAAI--ENGKL--SDXXXXXXXXXXXXXXXXXXSSLIKQQK 319
YH+ + +N ++ + + + QK
Sbjct: 648 ------------------YHSDVVRKNPRIFQNAHTAQTVLRKRGLINLAARNEIRAWQK 689
Query: 320 MQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP-PDIRPAFKH 378
Q+ G++ + W Q RA+VG ++Q L+ A + + G + +PAF
Sbjct: 690 QQEEEGVLSSIPKWT---QAVRARVGSYLVQHLMHVANVSRKATDRDGVLWEEDQPAFYS 746
Query: 379 TFKTAMADSQKDIRRYGIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAY 436
T++ ++ G+I+ + ++ + L+K S + + P +LPMLVPP WT +D G Y
Sbjct: 747 TYQYLGG------KKLGVIKLNEVIAQRLDKDSMQETLHPRHLPMLVPPKPWTSHDSGGY 800
Query: 437 LFLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS 495
+ MR + +Q ++ A ++ I ALD LGNT W+IN+ + DV+ +IW S
Sbjct: 801 YSVRQSAMRYKDSAEQGSYLRAASDTGDVDTILAALDVLGNTSWKINKPIFDVMLEIWNS 860
Query: 496 GGRLADL--VDR--------DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
G A + VD D+ +++W +Q + HSQRC+
Sbjct: 861 GKDTAGMPPVDMEQPEPQKPDNYNHDMKARSVYLQRLKQWNQQCAS-------NHSQRCD 913
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
+ KL +AR E+ FY+PHN+DFRGRAYPM P+LNH+G+DLCRG+L FA+ +PLGK+G
Sbjct: 914 VNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLMFADAKPLGKTG 972
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
LRWL+IH++N++ G DK + R F +H D+ DS +R L+G+RWWL+A+DP QCLA
Sbjct: 973 LRWLRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERTLDGQRWWLKADDPWQCLA 1030
Query: 666 ACINLSEALRSPT-PETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADV 724
AC+ L AL P PE S++PVH DG+CNGLQHYAALG D GA VNL RGDRPADV
Sbjct: 1031 ACMELKAALDHPDGPEAYESNLPVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGDRPADV 1090
Query: 725 YSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQ 784
YSG+A V++++ ++A K + +V RK+VKQTVMT+VYGVT++GA++Q
Sbjct: 1091 YSGVADLVIKMLDEEAAKGERLAT------ILQGKVTRKVVKQTVMTTVYGVTFIGAKNQ 1144
Query: 785 IKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAS----- 839
+ R+L R + + +LF A+ + AK ++ + +F A+ I WL AKVIA
Sbjct: 1145 VMRQLAARGDVPAE-DLFQAASFLAKIIMSCIGNLFSGAQKIQDWLIFSAKVIAKSIPSQ 1203
Query: 840 ------------------------TNEPVR-------------WTTPIGLPAVQPYRQIG 862
+ +P + WTT +GLP VQPYR+
Sbjct: 1204 RVEEATRPYQPSETNLKRADARGYSRDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKTK 1263
Query: 863 RSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
+ I T++Q + + +V +Q++AFPPNF+HSLD +HM++TA+ C AGL FA
Sbjct: 1264 KRQISTAMQTVFINDPHSNSEVSPAKQASAFPPNFIHSLDATHMILTALECHAAGLTFAS 1323
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
VHDSYWTHA D+D M+ ++RE FV L+ IL L E F + + P
Sbjct: 1324 VHDSYWTHAADIDTMSDMIRETFVRLHSQDILHRLREEFMQRYAGYKVP 1372
>J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_07409 PE=3 SV=1
Length = 1324
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 397/682 (58%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ A ++ G +++PAF H ++
Sbjct: 524 DIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEYVRG-- 581
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 582 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 637
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T WR+N+R+ DV+ + W G +AD+
Sbjct: 638 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPP 697
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 698 SEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 757
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 758 I-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 814
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 815 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 874
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 875 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 930
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 931 VEED--KKAGHDIALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 987
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F+ S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 988 HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTSTSRT 1047
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 1048 GKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 1107
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ + FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 1108 ATAFPPNFIHSLDATHMLLTALKCKQNNVAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1167
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1168 SQDLVGKLREDFLDRYGEYCIP 1189
>H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_6851 PE=3 SV=1
Length = 1357
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 314/883 (35%), Positives = 451/883 (51%), Gaps = 110/883 (12%)
Query: 131 DTMLRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
+T + RQ +E A E A + ++ E+ + + + + W+ + + E
Sbjct: 413 NTFNQDRQKVLENRATEAARERWKHDFEEAKARGDISIEKNLNAKLWKWYNNMLPLVQEE 472
Query: 191 QEVCK-----------KSH------RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG 233
CK K H ++ + PY + KM VIT+ +L+ L N G
Sbjct: 473 INHCKSLSLERPSPSDKKHLNKVETNRLDYGPYLTLIDPGKMCVITILELLKL---NSTG 529
Query: 234 --IGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKL 291
I R A + +G+AIE E R E + ++N K
Sbjct: 530 GVIEGMRTARAVISVGKAIEMEFRSEQVLKSESQTFRDVNKKSPE-----FKKLVQNAK- 583
Query: 292 SDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQL 351
SS I+Q K+ W Q RAK+G ++ +
Sbjct: 584 ----------------SVFRSSQIEQSKIL--------------WPQNIRAKIGSVLISM 613
Query: 352 LIETA--YIQS--PVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTK 405
LI A ++Q P+++ + G P AF H ++ + G+++ +
Sbjct: 614 LIHVAKVFVQGVDPITKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIH 663
Query: 406 GL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN- 462
L E+ ++ LPMLV P W + G Y + S ++RT + +Q +K A N
Sbjct: 664 QLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNG 723
Query: 463 QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VDRDDVXXXXXXXXXXXX 520
++ +++ L+ LG+T W +N+++ DV+SQ+W G D+ + V
Sbjct: 724 DIDRVYDGLNVLGDTPWTVNRKVFDVVSQVWNRGESFLDIPSAQEEMVLPLAPPRNSDPS 783
Query: 521 XIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPY 580
+R WK QVKTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+
Sbjct: 784 ILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPH 842
Query: 581 LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDV 640
NHLG+D+ RG+L F G+ LG SGL+WLKIHL+NL+ G DKL E RVAFTE+HL+DV
Sbjct: 843 FNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLRLEDRVAFTESHLNDV 900
Query: 641 FDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHY 700
DSA+ PL G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHY
Sbjct: 901 KDSAENPLSGERWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHY 960
Query: 701 AALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQV 760
AALG D GA VNLV D+P DVY+ +A V + + AEK E ++
Sbjct: 961 AALGGDVEGATQVNLVPNDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILKDKI 1014
Query: 761 DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMF 820
RK+VKQTVMT+VYGVTYVGA QI ++L +D E S Y K A+ E+F
Sbjct: 1015 TRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDYSKYLTKHVFGAIRELF 1072
Query: 821 EAARSIMSWLADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIG 862
+A I WL + AK I+ + N+P V WTTP+GLP VQPYR+
Sbjct: 1073 HSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREES 1132
Query: 863 RSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
+ ++T+LQ + + + V +RQ PPNF+HSLD SHM+++A C K GLDFA
Sbjct: 1133 KKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFAS 1192
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
VHDSYWTHA DVD MN +LRE+F++L+E ++ L E F + +
Sbjct: 1193 VHDSYWTHASDVDTMNVVLREQFIKLHEIDLVLRLKEEFDQRY 1235
>B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_03014 PE=3
SV=1
Length = 1169
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 312/922 (33%), Positives = 463/922 (50%), Gaps = 114/922 (12%)
Query: 137 RQVKMETEAWEEAAKEYQELLEDICEQ-KLVPNLPYMKSLFLGWFEPLKSAI------VA 189
RQ ME +A E + E++ +I + + P+ + +L W+E L++ I +
Sbjct: 294 RQRLMEKKALESSIAEWRHSYNEILRRGENPPHSRSLNALLYVWYEKLEALIQEEFRQIE 353
Query: 190 EQEVCK----KSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
+ E K KS + +A Y L K+A IT+ +++ +TN R A +
Sbjct: 354 DSENNKASPYKSRTRAEYAQYLKLLSPSKLAAITVLEMLTF-VTNKRYCTGVRSTFALMS 412
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
+G A E E ++ ++ +
Sbjct: 413 VGRAFEKE---------------------------YFSEQLQKIEAEGNLPKSVDSKKLF 445
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPV--S 363
+S +K+ + + GI++ ++PW KV + LLI +A I+
Sbjct: 446 SSPRLFNSFVKKIRDNEDNGIVQS-SLYQPWSPNILVKVASVTVSLLINSAKIRDSALDP 504
Query: 364 QLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIP--YLPM 421
+ + AF+H ++ R+ G+I P++ L +P LPM
Sbjct: 505 ETKSTVFQDSSAFQHGYRYLAG------RKVGVIVAHPVLYDILASELSGAHLPPYRLPM 558
Query: 422 LVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWR 480
LV P W ++ G Y + V+R + +Q +K A QL+ + E L +LGN W+
Sbjct: 559 LVKPRPWLMWNSGGYYYSSESVLRFKESHEQLLYLKAASDSGQLKDLLEGLTALGNVGWK 618
Query: 481 INQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNE 538
+N+++ D++ +IW +G + + + W R +K +
Sbjct: 619 VNRKVYDMLVKIWNTGESFLSIPSANTTLDIQEMPEKSIDPSARAEWLRMLKERSLDFAS 678
Query: 539 RHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 598
+HSQRCE L +A+ E FY+PHNVDFRGRAYP+ +L+H+ SD CR +L FAEG
Sbjct: 679 QHSQRCEFNYTLEIAKAFLHET-FYFPHNVDFRGRAYPIPSHLHHVNSDFCRSLLIFAEG 737
Query: 599 RPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAE 658
+PLG+ G +WLK+ LANL+ G +K + R+ F +NHL D+F+S D+PL+G ++W +A+
Sbjct: 738 KPLGEEGFQWLKVQLANLF--GKNKSTIQERIDFVDNHLQDIFNSVDKPLDGEQFWTKAD 795
Query: 659 DPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRG 718
DP Q LA C +++A+RS P + ISHVPV DG+CNGLQHYAALG D GA VNL
Sbjct: 796 DPFQALAVCFEIADAIRSGDPSSFISHVPVQQDGTCNGLQHYAALGGDPEGAREVNLEPS 855
Query: 719 DRPADVYSGIASRVLEIMRKDAEK-DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
+RP DVY+ +A+RV+ I++K+A DP +V R ++KQ VMT+VYGVT
Sbjct: 856 NRPNDVYAAVAARVISILKKEAAAGDP-------MAELLKDRVTRTVIKQPVMTNVYGVT 908
Query: 778 YVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
YVGAR QI+++LK + I D L AS + AK +L +F+ A I WLADCA +I
Sbjct: 909 YVGARAQIEKQLKLQEDIPKDL-LRDASAFLAKRVFQSLRALFKRAHEIQDWLADCAALI 967
Query: 838 AST-------------NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV 884
A + V WTTP+ LP VQPYR+ I T+LQ + L V
Sbjct: 968 AHSVPEEALKQKELDKMTAVVWTTPLNLPVVQPYRKFPSKQITTNLQSVYLEDPDSNAPV 1027
Query: 885 --KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREK 942
++Q+TA PPNF+HSLD +HM MT + CKK + F VHDSYWTHA V E+N +LRE
Sbjct: 1028 DPRKQTTAVPPNFIHSLDATHMFMTCLKCKKRNITFVSVHDSYWTHAASVAELNGLLREA 1087
Query: 943 FVELYEAPILENLLESFQ----------------------------------KSFPKLNF 968
FVEL+ IL +L F+ K + L F
Sbjct: 1088 FVELHSRDILGDLKREFEDRYKNHYVHNHYPVDSPAGQYLLQQGATAKRSVVKGWAPLTF 1147
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
P +PERG FD+R VL+SQYFF+
Sbjct: 1148 PEVPERGTFDIRSVLHSQYFFS 1169
>R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ichthyophaga EXF-994
GN=J056_000290 PE=4 SV=1
Length = 1311
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/677 (39%), Positives = 384/677 (56%), Gaps = 55/677 (8%)
Query: 333 WKP-WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W P W Q R KVG ++ L+E A I + G + +PAF +++
Sbjct: 528 WTPNWSQMIRIKVGSFLVDSLMECATITRIADRDGEEIKETQPAFSQSYQYVRG------ 581
Query: 392 RRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGA 449
R+ G+I+ + +V L+K I +LPMLV P W RYD G YLF ++ MR +
Sbjct: 582 RKLGVIKVNTVVADRLDKDPLGSTIHPRHLPMLVKPKPWLRYDNGGYLFHKNFAMRFKDS 641
Query: 450 KQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV 508
+Q + +A +EP+ LD LG T W +NQ++ V+ Q W SG +A +
Sbjct: 642 NEQQSYIAKASNEGTMEPVLAGLDVLGQTPWNVNQKVFAVVKQAWNSGEGVAKIPPATTH 701
Query: 509 XXXXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYP 565
++ + +K ++ E HS RC+ KL +A+ E FY+P
Sbjct: 702 TPDPIKPSNYESDPKQRSNYLISMKAVVNERRNNHSIRCDTNYKLEIAKAFLNET-FYFP 760
Query: 566 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLC 625
H +DFRGRAYP+ P+LNH+G DL RG+L+FAE RPLG+ G+RWLKIHLAN+Y G DK
Sbjct: 761 HTLDFRGRAYPIPPHLNHIGDDLSRGLLKFAETRPLGEKGMRWLKIHLANVY--GYDKAS 818
Query: 626 YESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
+ R F + HL D++DSADRPL+GR WWL+A+DP QCLAAC + AL S P S
Sbjct: 819 FNERENFADEHLADIYDSADRPLDGRGWWLKADDPWQCLAACYEIQAALESSNPLAYESS 878
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
+PVH DG+CNGLQHYAALG D +GA VNL + DRP+DVY+ +A V+ +R+DA+ D
Sbjct: 879 LPVHQDGTCNGLQHYAALGGDPMGAKQVNLEQADRPSDVYTAVADLVIADIRRDAQTDDN 938
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
++ RK+VKQTVMT+VYGVT++GARDQI ++L++R I + ++S +
Sbjct: 939 A-----FAKLLEGKITRKVVKQTVMTTVYGVTFIGARDQIDKQLQDRGDIPREL-IYSTA 992
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------------- 845
Y AK L ++ ++F A +I WL+ A+ ++ + P R
Sbjct: 993 SYLAKKVLRSIGDLFSGANAIQKWLSMSARYVSKSIPPERLVKALEPAEGRSASGKSTAS 1052
Query: 846 -----------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK--RQSTAFP 892
WTTP+GLP VQPYR+ + I T LQ + L V +Q++AFP
Sbjct: 1053 RTSKEQMTSVIWTTPLGLPIVQPYRKAKKKQIATLLQSVYLADPNLPTEVNPIKQASAFP 1112
Query: 893 PNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 952
PNF+HSLD +HM++TA+ C + G+ +A VHDSYWTHA VD M+ I+R+ FV+L+ IL
Sbjct: 1113 PNFIHSLDATHMILTALQCCQIGITYASVHDSYWTHASTVDHMSEIIRDTFVKLHCEEIL 1172
Query: 953 ENLLESFQKSFPKLNFP 969
+ L + + + P
Sbjct: 1173 KRLRDEVVERYKGYRIP 1189
>Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 395/682 (57%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T W+IN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_I1030W
PE=3 SV=1
Length = 1180
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 395/682 (57%), Gaps = 59/682 (8%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADS 387
D W P W + + VG ++ L++ ++ G +++PAF H ++
Sbjct: 402 DIWTPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVRG-- 459
Query: 388 QKDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
++ G+I+ +P+V L K +VI +LPMLV P WT ++KG YL VMR
Sbjct: 460 ----KKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMR 515
Query: 446 THGAKQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD 504
+ +Q + +K A LEP+F LD L +T W+IN+R+ DV+ + W G +AD+
Sbjct: 516 YKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPP 575
Query: 505 RDDVXX----XXXXXXXXXXXIR-KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+D +R ++ + K ++ + + H++RC+ + +AR ++
Sbjct: 576 SEDKAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD 635
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F +PLG++GL+WL+IHLAN+Y
Sbjct: 636 T-FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY-- 692
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK + R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C L+ ALRSP P
Sbjct: 693 GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNP 752
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S +PVH DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G V++I+ K
Sbjct: 753 SAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKV 808
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
E+D + + RK+VKQTVMT+VYGVT+VGARDQI ++L R I +
Sbjct: 809 VEEDKKAGHDIALLIKEP--LGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE- 865
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------- 845
+F S Y AKT L + ++F A++IM WL A++I+ + P R
Sbjct: 866 HIFVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRT 925
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQ 887
WTTP+GLP VQPYR+ + I T+LQ +S +V ++Q
Sbjct: 926 GKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQ 985
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
+TAFPPNF+HSLD +HM++TA+ CK+ L FA VHDSYWTHA V++M+ ++R+ FVEL+
Sbjct: 986 ATAFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELH 1045
Query: 948 EAPILENLLESFQKSFPKLNFP 969
++ L E F + + P
Sbjct: 1046 SQDLVGKLREDFLDRYGEYCIP 1067
>F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_363576 PE=3 SV=1
Length = 1134
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/674 (40%), Positives = 393/674 (58%), Gaps = 56/674 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPV--SQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
W Q R +VG ++ L++ A + + + + +PAF H ++ ++
Sbjct: 356 WTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISEDQPAFYHAYEYVRG------QK 409
Query: 394 YGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ 451
G+I +P+V + K + + P +LPMLV P W YD+G YL+ S MR +++
Sbjct: 410 LGVIRLNPVVADRIAKDGLRETLHPRHLPMLVKPKPWLNYDQGGYLYNKSSAMRFKDSQE 469
Query: 452 QCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXX 510
Q ++ A +E ++ LD LG+T W+IN+ + DV+ +W SG RL L
Sbjct: 470 QQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVFDVVLTVWNSGERLCKLPPSVFDQP 529
Query: 511 XXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
I+ + +++K M+ HS RC + K+ +AR + Y PHN
Sbjct: 530 EPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDRCSVNYKIEIARAFLGDT-MYLPHN 588
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P+LNH+G DL RG+L F E +PLG+ GLRWLKIHLANLY G DK ++
Sbjct: 589 LDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY--GFDKANFD 646
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
RV + LD+V+DSA++PLEGRRWW +A+DP QCLA C+ L AL S PE +S +P
Sbjct: 647 ERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQCLATCMELRAALESEDPEAYMSSLP 706
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETN 747
VH DG+CNGLQHYAALG D GA VNL +RP+DVY+ +A+ V + +DA D
Sbjct: 707 VHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSDVYTYVANMVQRQLDEDAAND---- 762
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCY 807
+V RK+VKQTVMT+VYGVTY+GARDQI+R+LK+R I ++ E ++A+ Y
Sbjct: 763 --HKYAKMLQGKVARKVVKQTVMTTVYGVTYIGARDQIERQLKDRKDIPEE-ECWNAAAY 819
Query: 808 AAKTTLTALEEMFEAARSIMSWLADCAKVIA-----------------------STNE-- 842
AK TL + ++F A++I +WL CA+++A STN
Sbjct: 820 LAKKTLFCIGDLFSGAKAIQTWLNLCARLVAKSIPAERIPEALEAEKTKRRLPVSTNRIR 879
Query: 843 -----PVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNF 895
V WTTP+GLP VQPYR++ R I T+LQ + + +V +Q++AFPPNF
Sbjct: 880 KEQMTSVVWTTPLGLPIVQPYRKVKRKQIMTALQTVYISDPNAPAEVNANKQASAFPPNF 939
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
+HSLD +HMM+TA+ C+ G+ FA VHDSYWTHA +D+M+ I+R+ F+ L+ + +L L
Sbjct: 940 IHSLDATHMMLTALECRTQGVTFASVHDSYWTHASSIDQMSEIIRDTFIALHSSDVLGKL 999
Query: 956 LESFQKSFPKLNFP 969
F++ + P
Sbjct: 1000 YSEFKERYRTHKIP 1013
>F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_114135 PE=3 SV=1
Length = 986
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/674 (40%), Positives = 394/674 (58%), Gaps = 56/674 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPV--SQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
W Q R +VG ++ L++ A + + + + +PAF H ++ ++
Sbjct: 208 WTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISEDQPAFYHAYEYVRG------QK 261
Query: 394 YGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ 451
G+I +P+V + K + + P +LPMLV P W YD+G YL+ S MR +++
Sbjct: 262 LGVIRLNPVVADRIAKDGLRETLHPRHLPMLVKPKPWLNYDQGGYLYNKSSAMRFKDSQE 321
Query: 452 QCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXX 510
Q ++ A +E ++ LD LG+T W+IN+ + DV+ +W SG RL L
Sbjct: 322 QQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVFDVVLTVWNSGERLCKLPPSVFDQP 381
Query: 511 XXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
I+ + +++K M+ HS RC + K+ +AR + Y PHN
Sbjct: 382 EPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDRCSVNYKIEIARAFLGDT-MYLPHN 440
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P+LNH+G DL RG+L F E +PLG+ GLRWLKIHLANLY G DK ++
Sbjct: 441 LDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY--GFDKANFD 498
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVP 687
RV + LD+V+DSA++PLEGRRWW +A+DP QCLA C+ L AL S PE +S +P
Sbjct: 499 ERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQCLATCMELRAALESEDPEAYMSSLP 558
Query: 688 VHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETN 747
VH DG+CNGLQHYAALG D GA VNL +RP+DVY+ +A+ V + +DA D +
Sbjct: 559 VHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSDVYTYVANMVQRQLDEDAANDHK-- 616
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCY 807
+V RK+VKQTVMT+VYGVTY+GARDQI+R+LK+R I ++ E ++A+ Y
Sbjct: 617 ----YAKMLQGKVARKVVKQTVMTTVYGVTYIGARDQIERQLKDRKDIPEE-ECWNAAAY 671
Query: 808 AAKTTLTALEEMFEAARSIMSWLADCAKVIA-----------------------STNE-- 842
AK TL + ++F A++I +WL CA+++A STN
Sbjct: 672 LAKKTLFCIGDLFSGAKAIQTWLNLCARLVAKSIPAERIPEALEAEKTKRRLPVSTNRIR 731
Query: 843 -----PVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNF 895
V WTTP+GLP VQPYR++ R I T+LQ + + +V +Q++AFPPNF
Sbjct: 732 KEQMTSVVWTTPLGLPIVQPYRKVKRKQIMTALQTVYISDPNAPAEVNANKQASAFPPNF 791
Query: 896 VHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
+HSLD +HMM+TA+ C+ G+ FA VHDSYWTHA +D+M+ I+R+ F+ L+ + +L L
Sbjct: 792 IHSLDATHMMLTALECRTQGVTFASVHDSYWTHASSIDQMSEIIRDTFIALHSSDVLGKL 851
Query: 956 LESFQKSFPKLNFP 969
F++ + P
Sbjct: 852 YSEFKERYRTHKIP 865
>C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/814 (36%), Positives = 428/814 (52%), Gaps = 93/814 (11%)
Query: 183 LKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVI 240
L + ++ + K ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 476 LSEKLSDKKSLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTA 532
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
A + +G+AIE E R E + ++N K
Sbjct: 533 RAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPE-----FKKLVQNAK---------- 577
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ- 359
SS I+Q K+ W Q RA++G ++ +LI+ A +
Sbjct: 578 -------SVFRSSQIEQSKIL--------------WPQSIRARIGSVLISMLIQVAKVSV 616
Query: 360 ---SPVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
PV++ + G P AF H ++ + G+++ + + L E+
Sbjct: 617 QGVDPVTKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIA 666
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEAL 471
++ LPMLV P W + G Y + S ++RT + +Q +K A N ++ +++ L
Sbjct: 667 SVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGL 726
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQV 529
+ LG T W +N+++ DV+SQ+W G D+ D V +R WK QV
Sbjct: 727 NVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQV 786
Query: 530 KTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 589
KTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 787 KTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMS 845
Query: 590 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLE 649
RG+L F G+ LG SGL+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL
Sbjct: 846 RGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLT 903
Query: 650 GRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHYAALG D G
Sbjct: 904 GDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEG 963
Query: 710 AAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTV 769
A VNLV D+P DVY+ +A V + + AEK E ++ RK+VKQTV
Sbjct: 964 ATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTV 1017
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MT+VYGVTYVGA QI ++L +D E S Y K +A+ E+F +A I W
Sbjct: 1018 MTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDW 1075
Query: 830 LADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
L + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+LQ
Sbjct: 1076 LGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQ 1135
Query: 872 VLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ + + V +RQ PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA
Sbjct: 1136 TVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHA 1195
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
D+D MN +LRE+F++L+E ++ L E F + +
Sbjct: 1196 SDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY 1229
>B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_05511 PE=3 SV=1
Length = 1351
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/814 (36%), Positives = 428/814 (52%), Gaps = 93/814 (11%)
Query: 183 LKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVI 240
L + ++ + K ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 476 LSEKLSDKKSLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTA 532
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
A + +G+AIE E R E + ++N K
Sbjct: 533 RAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPE-----FKKLVQNAK---------- 577
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ- 359
SS I+Q K+ W Q RA++G ++ +LI+ A +
Sbjct: 578 -------SVFRSSQIEQSKIL--------------WPQSIRARIGSVLISMLIQVAKVSV 616
Query: 360 ---SPVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
PV++ + G P AF H ++ + G+++ + + L E+
Sbjct: 617 QGVDPVTKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIA 666
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEAL 471
++ LPMLV P W + G Y + S ++RT + +Q +K A N ++ +++ L
Sbjct: 667 SVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGL 726
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQV 529
+ LG T W +N+++ DV+SQ+W G D+ D V +R WK QV
Sbjct: 727 NVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQV 786
Query: 530 KTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 589
KTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 787 KTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMS 845
Query: 590 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLE 649
RG+L F G+ LG SGL+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL
Sbjct: 846 RGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLT 903
Query: 650 GRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHYAALG D G
Sbjct: 904 GDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEG 963
Query: 710 AAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTV 769
A VNLV D+P DVY+ +A V + + AEK E ++ RK+VKQTV
Sbjct: 964 ATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTV 1017
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MT+VYGVTYVGA QI ++L +D E S Y K +A+ E+F +A I W
Sbjct: 1018 MTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDW 1075
Query: 830 LADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
L + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+LQ
Sbjct: 1076 LGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQ 1135
Query: 872 VLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ + + V +RQ PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA
Sbjct: 1136 TVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHA 1195
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
D+D MN +LRE+F++L+E ++ L E F + +
Sbjct: 1196 SDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY 1229
>C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1F14_0430g PE=3 SV=1
Length = 1351
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/814 (36%), Positives = 428/814 (52%), Gaps = 93/814 (11%)
Query: 183 LKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVI 240
L + ++ + K ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 476 LSEKLSDKKSLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTA 532
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
A + +G+AIE E R E + ++N K
Sbjct: 533 RAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPE-----FKKLVQNAK---------- 577
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ- 359
SS I+Q K+ W Q RA++G ++ +LI+ A +
Sbjct: 578 -------SVFRSSQIEQSKIL--------------WPQSIRARIGSVLISMLIQVAKVSV 616
Query: 360 ---SPVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
PV++ + G P AF H ++ + G+++ + + L E+
Sbjct: 617 QGVDPVTKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIA 666
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEAL 471
++ LPMLV P W + G Y + S ++RT + +Q +K A N ++ +++ L
Sbjct: 667 SVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGL 726
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQV 529
+ LG T W +N+++ DV+SQ+W G D+ D V +R WK QV
Sbjct: 727 NVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQV 786
Query: 530 KTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 589
KTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 787 KTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMS 845
Query: 590 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLE 649
RG+L F G+ LG SGL+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL
Sbjct: 846 RGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLT 903
Query: 650 GRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHYAALG D G
Sbjct: 904 GDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEG 963
Query: 710 AAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTV 769
A VNLV D+P DVY+ +A V + + AEK E ++ RK+VKQTV
Sbjct: 964 ATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTV 1017
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MT+VYGVTYVGA QI ++L +D E S Y K +A+ E+F +A I W
Sbjct: 1018 MTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDW 1075
Query: 830 LADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
L + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+LQ
Sbjct: 1076 LGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQ 1135
Query: 872 VLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ + + V +RQ PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA
Sbjct: 1136 TVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHA 1195
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
D+D MN +LRE+F++L+E ++ L E F + +
Sbjct: 1196 SDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY 1229
>A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/814 (36%), Positives = 428/814 (52%), Gaps = 93/814 (11%)
Query: 183 LKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVI 240
L + ++ + K ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 476 LSEKLSDKKSLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTA 532
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
A + +G+AIE E R E + ++N K
Sbjct: 533 RAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPE-----FKKLVQNAK---------- 577
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ- 359
SS I+Q K+ W Q RA++G ++ +LI+ A +
Sbjct: 578 -------SVFRSSQIEQSKIL--------------WPQSIRARIGSVLISMLIQVAKVSV 616
Query: 360 ---SPVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
PV++ + G P AF H ++ + G+++ + + L E+
Sbjct: 617 QGVDPVTKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIA 666
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEAL 471
++ LPMLV P W + G Y + S ++RT + +Q +K A N ++ +++ L
Sbjct: 667 SVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGL 726
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQV 529
+ LG T W +N+++ DV+SQ+W G D+ D V +R WK QV
Sbjct: 727 NVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQV 786
Query: 530 KTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 589
KTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 787 KTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMS 845
Query: 590 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLE 649
RG+L F G+ LG SGL+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL
Sbjct: 846 RGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLT 903
Query: 650 GRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHYAALG D G
Sbjct: 904 GDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEG 963
Query: 710 AAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTV 769
A VNLV D+P DVY+ +A V + + AEK E ++ RK+VKQTV
Sbjct: 964 ATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTV 1017
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MT+VYGVTYVGA QI ++L +D E S Y K +A+ E+F +A I W
Sbjct: 1018 MTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDW 1075
Query: 830 LADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
L + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+LQ
Sbjct: 1076 LGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQ 1135
Query: 872 VLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ + + V +RQ PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA
Sbjct: 1136 TVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHA 1195
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
D+D MN +LRE+F++L+E ++ L E F + +
Sbjct: 1196 SDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY 1229
>N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_3346 PE=4 SV=1
Length = 1351
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/797 (37%), Positives = 422/797 (52%), Gaps = 93/797 (11%)
Query: 200 KMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVIHAALQIGEAIENEARIX 257
++ + PY + KM VIT+ +L+ L N G I R A + +G+AIE E R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSE 549
Query: 258 XXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQ 317
E + ++N K SS I+Q
Sbjct: 550 QVLKSESQAFRDVNKKSPE-----FKKLVQNAK-----------------SVFRSSQIEQ 587
Query: 318 QKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ----SPVSQ--LGGSPPD 371
K+ W Q RA++G ++ +LI+ A + PV++ + G P
Sbjct: 588 SKIL--------------WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEAP- 632
Query: 372 IRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWT 429
AF H ++ + G+++ + + L E+ ++ LPMLV P W
Sbjct: 633 ---AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWV 683
Query: 430 RYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDV 488
+ G Y + S ++RT + +Q +K A N ++ +++ L+ LG T W +N+++ DV
Sbjct: 684 NWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDV 743
Query: 489 ISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEI 546
+SQ+W G D+ D V +R WK QVKTI + + S RC+
Sbjct: 744 VSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDT 803
Query: 547 ELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 606
KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL
Sbjct: 804 NYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGL 862
Query: 607 RWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAA 666
+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL G RWW A+ P Q LA
Sbjct: 863 KWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALAT 920
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
C L+E ++ PE ISH PVH DG+CNGLQHYAALG D GA VNLV D+P DVY+
Sbjct: 921 CFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYA 980
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
+A V + + AEK E ++ RK+VKQTVMT+VYGVTYVGA QI
Sbjct: 981 HVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIA 1034
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST------ 840
++L +D E S Y K +A+ E+F +A I WL + AK I+ +
Sbjct: 1035 KQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVD 1092
Query: 841 -------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKR 886
N+P V WTTP+GLP VQPYR+ + ++T+LQ + + + V +R
Sbjct: 1093 EKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARR 1152
Query: 887 QSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVEL 946
Q PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA D+D MN +LRE+F++L
Sbjct: 1153 QKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKL 1212
Query: 947 YEAPILENLLESFQKSF 963
+E ++ L E F + +
Sbjct: 1213 HEVDLVLRLKEEFDQRY 1229
>G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPO41 PE=3 SV=1
Length = 1351
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/797 (37%), Positives = 422/797 (52%), Gaps = 93/797 (11%)
Query: 200 KMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVIHAALQIGEAIENEARIX 257
++ + PY + KM VIT+ +L+ L N G I R A + +G+AIE E R
Sbjct: 493 RLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSE 549
Query: 258 XXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQ 317
E + ++N K SS I+Q
Sbjct: 550 QVLKSESQAFRDVNKKSPE-----FKKLVQNAK-----------------SVFRSSQIEQ 587
Query: 318 QKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ----SPVSQ--LGGSPPD 371
K+ W Q RA++G ++ +LI+ A + PV++ + G P
Sbjct: 588 SKIL--------------WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEAP- 632
Query: 372 IRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWT 429
AF H ++ + G+++ + + L E+ ++ LPMLV P W
Sbjct: 633 ---AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWV 683
Query: 430 RYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGNTKWRINQRLLDV 488
+ G Y + S ++RT + +Q +K A N ++ +++ L+ LG T W +N+++ DV
Sbjct: 684 NWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDV 743
Query: 489 ISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEI 546
+SQ+W G D+ D V +R WK QVKTI + + S RC+
Sbjct: 744 VSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDT 803
Query: 547 ELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL 606
KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+ RG+L F G+ LG SGL
Sbjct: 804 NYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGL 862
Query: 607 RWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAA 666
+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL G RWW A+ P Q LA
Sbjct: 863 KWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALAT 920
Query: 667 CINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYS 726
C L+E ++ PE ISH PVH DG+CNGLQHYAALG D GA VNLV D+P DVY+
Sbjct: 921 CFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYA 980
Query: 727 GIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIK 786
+A V + + AEK E ++ RK+VKQTVMT+VYGVTYVGA QI
Sbjct: 981 HVARLVQKRLEIAAEKGDEN------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIA 1034
Query: 787 RRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST------ 840
++L +D E S Y K +A+ E+F +A I WL + AK I+ +
Sbjct: 1035 KQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVD 1092
Query: 841 -------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKR 886
N+P V WTTP+GLP VQPYR+ + ++T+LQ + + + V +R
Sbjct: 1093 EKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARR 1152
Query: 887 QSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVEL 946
Q PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA D+D MN +LRE+F++L
Sbjct: 1153 QKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKL 1212
Query: 947 YEAPILENLLESFQKSF 963
+E ++ L E F + +
Sbjct: 1213 HEVDLVLRLKEEFDQRY 1229
>H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_1488 PE=3 SV=1
Length = 1351
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 298/814 (36%), Positives = 428/814 (52%), Gaps = 93/814 (11%)
Query: 183 LKSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARVI 240
L + ++ + K ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 476 LSEKLSDKKSLNKVDTNRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTA 532
Query: 241 HAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXX 300
A + +G+AIE E R E + ++N K
Sbjct: 533 RAVISVGKAIEMEFRSEQVLKSESQAFRDVNKKSPE-----FKKLVQNAK---------- 577
Query: 301 XXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ- 359
SS I+Q K+ W Q RA++G ++ +LI+ A +
Sbjct: 578 -------SVFRSSQIEQSKIL--------------WPQSIRARIGSVLISMLIQVAKVSV 616
Query: 360 ---SPVSQ--LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKSAK 412
PV++ + G P AF H ++ + G+++ + + L E+
Sbjct: 617 QGVDPVTKAKVHGEAP----AFAHGYQYHNGS------KLGVLKIHKTLIRQLNGERLIA 666
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEAL 471
++ LPMLV P W + G Y + S ++RT + +Q +K A N ++ +++ L
Sbjct: 667 SVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGL 726
Query: 472 DSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKRQV 529
+ LG T W +N+++ DV+SQ+W G D+ D V +R WK QV
Sbjct: 727 NVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQDEMVLPPAPPKNSDPTILRAWKLQV 786
Query: 530 KTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 589
KTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D+
Sbjct: 787 KTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMS 845
Query: 590 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLE 649
RG+L F G+ LG SGL+WLKIHL+NL+ G DKL + RVAFTE+HL D+ DSA+ PL
Sbjct: 846 RGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLPLKDRVAFTESHLQDIKDSAENPLT 903
Query: 650 GRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLG 709
G RWW A+ P Q LA C L+E ++ PE ISH PVH DG+CNGLQHYAALG D G
Sbjct: 904 GDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEG 963
Query: 710 AAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTV 769
A VNLV D+P DVY+ +A V + +R + K E ++ RK+VKQTV
Sbjct: 964 ATQVNLVPSDKPQDVYAHVARLVTKKIRNCSRKGDEN------AKILKDKITRKVVKQTV 1017
Query: 770 MTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSW 829
MT+VYGVTYVGA QI ++L +D E S Y K +A+ E+F +A I W
Sbjct: 1018 MTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFSAIRELFHSAHLIQDW 1075
Query: 830 LADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
L + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+LQ
Sbjct: 1076 LGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETNLQ 1135
Query: 872 VLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
+ + + V +RQ PPNF+HSLD SHM+++A C K GLDFA VHDSYWTHA
Sbjct: 1136 TVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASVHDSYWTHA 1195
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
D+D MN +LRE+F++L+E ++ L E F + +
Sbjct: 1196 SDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY 1229
>I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia sebi (strain ATCC
MYA-4683 / CBS 633.66) GN=WALSEDRAFT_49331 PE=3 SV=1
Length = 1136
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/684 (39%), Positives = 388/684 (56%), Gaps = 63/684 (9%)
Query: 333 WKP-WGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADSQK 389
W P W Q R KVG ++ L+E A I + G + +PAF +++
Sbjct: 357 WTPNWSQIIRIKVGSFLVDSLMECATITRTAKHPESGEEMTEAQPAFSQSYQYVRG---- 412
Query: 390 DIRRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTH 447
++ G+I+ + V L+K I +LPMLV P W RYD G YLF + MR
Sbjct: 413 --KKLGVIKVNTAVADRLDKDPLGSTIHPRHLPMLVKPKPWLRYDSGGYLFHKNSAMRFK 470
Query: 448 GA-KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL---V 503
+ +QQ +K + +EP+ LD LG T W IN+++ +V+ + W +G LA +
Sbjct: 471 DSNEQQSYILKASSEGTMEPVLAGLDVLGATPWNINRKVFNVVKEAWNTGEGLAKIPPAT 530
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
+ + + +K ++ E HS RC+ KL +AR E FY
Sbjct: 531 TKTPDPVKPANYAIDPKERSNYLQSMKAVVNERRNNHSIRCDTNYKLEIARAFLNET-FY 589
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PH +DFRGRAYP+ P+LNH+G DL RG+L FAE RPLG+ G+RWLKIHLAN+Y G DK
Sbjct: 590 FPHTLDFRGRAYPIPPHLNHIGDDLSRGLLIFAEKRPLGEKGMRWLKIHLANVY--GYDK 647
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ R F + H+++++DSAD PL GR+WWL+A+DP QCLAAC + A+ SP P
Sbjct: 648 ASFNEREQFADEHMEEIYDSADNPLNGRKWWLKADDPWQCLAACYEIQAAMLSPNPLAYE 707
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA-EK 742
S +PVH DG+CNGLQHYAALG D +GA VNL +GDRP+DVY+ +A V+E ++KDA E
Sbjct: 708 SALPVHQDGTCNGLQHYAALGGDPMGAKQVNLEQGDRPSDVYTAVADLVIEDIKKDALES 767
Query: 743 DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELF 802
D E ++ RK+VKQTVMT+VYGVT++GARDQI ++L++R I D +++
Sbjct: 768 DNE------FAKILEGKITRKVVKQTVMTTVYGVTFIGARDQIDKQLQDRGDIPQD-KVY 820
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR----------------- 845
+ + Y AK L ++ ++F A +I WL+ A+ IA + P R
Sbjct: 821 TTASYLAKKVLRSIGDLFAGANAIQKWLSMSARYIAKSIPPERLIRALEPLEAKRKNSPA 880
Query: 846 ------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLVK-- 885
WTTP+GLP VQPYR+ + + T LQ + L V
Sbjct: 881 NKGNVSTRTAKEQMTSVIWTTPLGLPIVQPYRKAKKKQVATLLQSVYLADPNIPTEVNPI 940
Query: 886 RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVE 945
+Q++AFPPNF+HSLD +HM++TA+ C + G+ +A VHDSYWTHA VD M+ I+R+ FV+
Sbjct: 941 KQASAFPPNFIHSLDATHMVLTALQCSQIGITYASVHDSYWTHASTVDHMSEIIRDTFVK 1000
Query: 946 LYEAPILENLLESFQKSFPKLNFP 969
L+ IL+ L + + + P
Sbjct: 1001 LHCEEILKRLRDEVIERYKGYRIP 1024
>D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber melanosporum (strain
Mel28) GN=GSTUM_00011240001 PE=3 SV=1
Length = 1416
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 306/876 (34%), Positives = 451/876 (51%), Gaps = 96/876 (10%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
+RQ +E A++ A + ++ E + E+ ++ + SL W + L I E + +
Sbjct: 354 ERQKLLEEHAFDSARERWKRDFESLSERGVIKQDAEINSLLWEWHQALVPLIHEELKRVQ 413
Query: 196 KSHRKMTHA----------PYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIHAALQ 245
+ T A P+ + +K+A IT+ +L+ N G G + A LQ
Sbjct: 414 HAEESGTKAAGAVDRCFYGPFMRVIEPEKLAAITIIELLRTHTLNGVGAGL-KASRAVLQ 472
Query: 246 IGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXXXXXX 305
+G +E E + GE + A + +L
Sbjct: 473 LGREVELEYQAQEVAKQR---------------GEGFFANMSKAELETIFRDRSAFRNLI 517
Query: 306 XXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQL 365
S L ++ W + K+G ++ +LI A I +
Sbjct: 518 SKSKSASDL--------------DFEEIPEWPNTVKVKLGGVLISMLIHVARIPVEAAVP 563
Query: 366 G---GSPPDIR-----PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNM--V 415
G G+ + PAF+H ++ R+ G+++ P + K L N +
Sbjct: 564 GLTEGTESSEKIVQHLPAFQHCYEYQRG------RKLGVVKLHPELVKRLGTDDLNFTAI 617
Query: 416 IPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSL 474
LPM+V P WT +D+G Y + S V+R + +Q + VK A L+ +F LD L
Sbjct: 618 GKSLPMVVRPLPWTDWDEGGYFYTRSKVVRIRESVEQRQYVKAAAERGHLDHLFAGLDVL 677
Query: 475 GNTKWRINQRLLDVISQIWTSGGRLADLVDRD-DVXXXXXXXXXXXXXIR-KWKRQVKTI 532
G T WRIN+R+ DV+ ++W A + + D+ +R +W R++K +
Sbjct: 678 GRTAWRINRRVFDVVLEVWNQEKAFAKIPALNPDINFPLEPEPNADPKVRWEWAREMKRV 737
Query: 533 MKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 592
HS RC++ K+ +AR E+ FY+PHN+DFRGRAYP+ P LNH+G+DL RG+
Sbjct: 738 NTARKNNHSTRCDVNFKVEIARAFLFEE-FYFPHNIDFRGRAYPIPPNLNHIGNDLSRGL 796
Query: 593 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRR 652
L F+E + +G++GLRW+KIHLANL G DK + RVAFTE +++++ DSA+ PL G R
Sbjct: 797 LMFSEAKEVGETGLRWMKIHLANL--AGYDKASFSQRVAFTEENIENIHDSAENPLTGNR 854
Query: 653 WWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAA 712
WWL+++DP Q LA+C L+EAL P H+PV DG+CNGLQHYAALG D GA
Sbjct: 855 WWLKSDDPWQLLASCFALNEALSLNNPHEYKCHIPVAQDGTCNGLQHYAALGGDVAGARQ 914
Query: 713 VNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTS 772
VNL D P DVY+G+A V + DA++ V RK+VKQTVMT+
Sbjct: 915 VNLEPSDLPQDVYTGVAELVKASVELDAKRG------LPAAVALKDLVTRKVVKQTVMTN 968
Query: 773 VYGVTYVGARDQIKRRLKERCAIE--DDSELFSASCYAAKTTLTALEEMFEAARSIMSWL 830
VYGVT++GAR+QI+ +LK IE D ++ + S Y K +++EMF A +I WL
Sbjct: 969 VYGVTFIGARNQIENQLK---CIESLDQKDIPALSLYLTKKVFDSIQEMFTGASAIQDWL 1025
Query: 831 ADCAKVIASTNEP---------------------VRWTTPIGLPAVQPYRQIGRSIIKTS 869
CAK I+ + P V WTTP+ LP VQPYRQ+ + I T+
Sbjct: 1026 VTCAKRISRSVRPNQLEHLKDPKTGEDSVHFMTSVVWTTPLRLPVVQPYRQVASAAISTN 1085
Query: 870 LQVLSLRRE--TDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWT 927
LQ + + DKV ++Q TAFPPNF+HSLD SHM+++A+ C +GL FA VHDS+WT
Sbjct: 1086 LQTVYINDPYVIDKVDSRKQMTAFPPNFIHSLDASHMLLSALNCDASGLTFASVHDSFWT 1145
Query: 928 HACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
H DVDEMNRILR+ FV L+ I+ENL F++ +
Sbjct: 1146 HPSDVDEMNRILRDSFVALHGKDIIENLKAEFEERY 1181
>A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassezia globosa (strain
ATCC MYA-4612 / CBS 7966) GN=MGL_3857 PE=3 SV=1
Length = 1358
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/685 (40%), Positives = 392/685 (57%), Gaps = 71/685 (10%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP-PDIRPAFKHTFKTAMADSQKDIRRY 394
W Q RA+VG ++Q L++ A + G + +PAF ++ ++
Sbjct: 586 WTQIIRARVGSFLVQHLLDVATVHRKAYDRDGELWEEDQPAFYSAYEYIQG------KKL 639
Query: 395 GIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
G+I + +V++ L+K S + + P +LPMLVPP W +D G Y + + MR + +Q
Sbjct: 640 GVIRLNEVVSQRLDKESVRETLHPRHLPMLVPPRPWLSHDSGGYYSMKTSAMRYKDSVEQ 699
Query: 453 CEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXX 511
++ A N LE + LD LGNT W +N+ + DV+ QIW SG L DL +
Sbjct: 700 SSYLRAASENHGLEVVLAGLDVLGNTAWNVNKEVFDVVLQIWNSGEALGDLPPAEMTDPE 759
Query: 512 XXXXXXXXXXIR----KWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHN 567
+ + RQ TI N HSQRC+I KL +AR E+ FY+PHN
Sbjct: 760 PERPPPDDIKAKGIYLQRLRQWNTIRSSN---HSQRCDINYKLEIARSFLNER-FYFPHN 815
Query: 568 VDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYE 627
+DFRGRAYP+ P+LNH+G+DLCRG+L+FAE +PLG+ GLRWL+IHLAN++ G DK +
Sbjct: 816 MDFRGRAYPIPPHLNHIGNDLCRGLLKFAEAKPLGEKGLRWLRIHLANVW--GYDKASFA 873
Query: 628 SRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPT-PETTISHV 686
R FT +H D+ DSA G+RWWL+A+DP QCLA CI L++A P PE S +
Sbjct: 874 EREQFTIDHEADIRDSATNAYHGKRWWLQADDPWQCLATCIELTKAWDYPDGPEAFPSQL 933
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK-DPE 745
PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+G+A V+E + + AE+ DP
Sbjct: 934 PVHQDGTCNGLQHYAALGGDLQGAKQVNLRGGDRPADVYTGVAELVIEQLNRRAEEGDPT 993
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
+V RK+VKQTVMT+VYGVT++GA++Q+ R+L +R + E+++A+
Sbjct: 994 AQ-------LLRGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLVDRGDTPAE-EVWTAA 1045
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR-------------------- 845
Y AK + + ++F A I WL A++IA + P R
Sbjct: 1046 SYLAKVIMDCIGDLFSGANMIQDWLTITARMIAKSIPPERVPYAQMKVTRKGSKADPEAH 1105
Query: 846 -------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLV 884
WT+ +GLP VQPYR+I + I T++Q + +R + +V
Sbjct: 1106 TKRPSVTSREGREQMTSVIWTSALGLPVVQPYRRIKKHQITTAVQSVYIRDPNQNFEVNT 1165
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
+Q++AFPPNF+HSLD +HM +TA+ C AGL FA VHDSYWTHACD+D M+ I+R+ FV
Sbjct: 1166 SKQASAFPPNFIHSLDATHMFLTALECHSAGLVFASVHDSYWTHACDIDTMSDIIRDTFV 1225
Query: 945 ELYEAPILENLLESFQKSFPKLNFP 969
L+ IL L + F + + P
Sbjct: 1226 RLHSQDILVRLRDEFLQRYKGYKVP 1250
>Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family protein
OS=Tetrahymena thermophila (strain SB210)
GN=TTHERM_01119540 PE=4 SV=1
Length = 1410
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/560 (43%), Positives = 364/560 (65%), Gaps = 13/560 (2%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTK 478
LPM+ P W Y+ G Y P+ +MR H + Q + + Y+ L ++ L+++ T
Sbjct: 696 LPMIYKPAPWQDYEIGGYYQRPTNLMRIHESPIQEKVL---SYSDLSKMYNILNTVSQTA 752
Query: 479 WRINQRLLDVISQIWTSGGRLADLVDR-DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
WRIN+++ DV+ +IW GG ++ R D R ++++ ++E
Sbjct: 753 WRINKKVFDVMEKIWEEGGGQGEIPRRFYDYKDYVYQYQLKECKNRDEQQRLMKKIQEQR 812
Query: 538 ERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597
+ HS R + +LK+ VA+ + + Y+PHNVDFRGR YP+ P+LNH+G+D+ RG+LE++E
Sbjct: 813 DMHSMRSDFQLKINVAKAFRNIEKIYFPHNVDFRGRIYPIPPHLNHMGADISRGLLEYSE 872
Query: 598 GRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEA 657
+ +GK+G WLK+HL+NL G DKL + RVAF E+ ++V A PL+ R W ++
Sbjct: 873 SKKIGKTGWYWLKVHLSNLL--GQDKLSFPERVAFAESQFENVKRWASDPLKHREW-IQV 929
Query: 658 EDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVR 717
ED Q LA +++EAL+ PE ISH+ VHMDGSCNGLQHYAA+GRDK GA VNL+
Sbjct: 930 EDAWQALATIFDVAEALKLENPEDYISHLHVHMDGSCNGLQHYAAIGRDKDGAMQVNLMN 989
Query: 718 GDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVT 777
+P D+YS +A V + + KDA D + RK+VKQTVMTSVYGVT
Sbjct: 990 AQKPGDLYSHVARMVEQRVGKDANDD--LAKYNAIAKKLSGNIKRKVVKQTVMTSVYGVT 1047
Query: 778 YVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
+VGAR QI ++L+++ + ++ E + AS Y A+TTL ++++F +A I WL +CA +I
Sbjct: 1048 FVGARKQIYKQLRDKDFLTEE-EAYEASYYLAQTTLDCIKDLFSSAHYIKKWLINCAGLI 1106
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGR-SIIKTSLQVLSLRRETDKVLVKR--QSTAFPPN 894
A+T+ PV W TP+GLP VQPYR G+ +I T +Q +++ +++D++ + + Q +AFPPN
Sbjct: 1107 ANTSNPVSWITPMGLPVVQPYRSKGQLDVINTVIQKIAVEQDSDRLPINKSKQRSAFPPN 1166
Query: 895 FVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 954
++HSLD +H+M TA+ C K G+ FA VHDSYWTHACD++EM++ILRE+FV+L+ P+LE+
Sbjct: 1167 YIHSLDSTHLMYTALECIKRGMHFAAVHDSYWTHACDIEEMHKILREQFVKLHSQPLLED 1226
Query: 955 LLESFQKSFPKLNFPPLPER 974
L SF++ +P + FP +P R
Sbjct: 1227 LKASFERRYPNIEFPEIPNR 1246
>C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G18744g PE=3 SV=1
Length = 1289
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/659 (40%), Positives = 382/659 (57%), Gaps = 52/659 (7%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQ----SPVS--QLGGSPPDIRPAFKHTFKTAMADSQK 389
W QEARAK+G ++ +LI A ++ PV+ ++ G P AF H ++
Sbjct: 533 WPQEARAKIGSILISMLIHVAKVKVEGVDPVTNEKIKGEAP----AFSHGYQYHNGS--- 585
Query: 390 DIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTH 447
+ G+++ + L E+ + LPMLV P W ++ G Y + S ++R+
Sbjct: 586 ---KLGVLKIHRSLIHQLNGERLVAAVQPQLLPMLVKPRAWNSWNSGGYYYTQSTLIRSK 642
Query: 448 GAKQQCEAVKR-APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VD 504
+ +Q +K + ++ ++ L+ LG T W +N+++ +V+SQ+W SG D+ +
Sbjct: 643 DSPEQVAYLKAVSDAGAIDNVYRGLNVLGETPWTVNRKMFNVMSQVWNSGKPFLDIPGIQ 702
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
R+WK + K + E + S RC+ KL +AR EK FY+
Sbjct: 703 EKLTLTPQPPRDADPSVHREWKLKNKELANEFSGNRSARCDANYKLEIARAFLGEK-FYF 761
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGRAYP+ P+ NHLG+D+ RG++ F G+ LG +GLRWLK+HL+NL+ G DK
Sbjct: 762 PHNLDFRGRAYPLSPHFNHLGNDMSRGLMTFWHGKRLGSTGLRWLKVHLSNLF--GFDKA 819
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
E RV F E+H+DD+ DSA+ PL+G+ WW EA+ P Q LA C+ L+EAL+ P+ +S
Sbjct: 820 PLEDRVRFAEDHIDDIRDSAEHPLDGKCWWKEADKPWQALATCMELNEALKMSNPDDFVS 879
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H PVH DG+CNGLQHYAALG D GA VNLV DRP DVYS +A V+ + K A
Sbjct: 880 HQPVHQDGTCNGLQHYAALGGDIEGATQVNLVPSDRPQDVYSHVAKLVVARLEKAAANGD 939
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
ET + ++ RK+VKQTVMT+VYGVTY+GA QI ++L D +
Sbjct: 940 ETAA------LLKDKIKRKVVKQTVMTNVYGVTYIGATHQIDKQLS--TLFNDHKRSYEL 991
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NEP-----VRW 846
S Y K ++ E+FE A I WL +CAK I+ + N+P V W
Sbjct: 992 SKYLTKHVFASVRELFEGAHLIQDWLGECAKRISKSIRLDVDEKTLKNGNKPDFMSSVIW 1051
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHM 904
TTP+GLP VQPYR+ G+ + T+LQ + + + + +RQ FPPNF+HSLD SHM
Sbjct: 1052 TTPLGLPIVQPYRENGKKQVATNLQTVFISDPFAINPINARRQKAGFPPNFIHSLDASHM 1111
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
+++A C + GLDFA VHDSYWTHACDVD MN +LRE+F++L+E ++E L + F + +
Sbjct: 1112 LLSAAKCGEKGLDFAAVHDSYWTHACDVDTMNVVLREQFIKLHEVDLIERLKDEFDERY 1170
>G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ichthyophthirius
multifiliis (strain G5) GN=IMG5_034000 PE=4 SV=1
Length = 926
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/570 (43%), Positives = 366/570 (64%), Gaps = 17/570 (2%)
Query: 419 LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGNT 477
LPM+ PP W Y+ G Y P+++MR ++ Q +++ +N L ++E L+ +G T
Sbjct: 295 LPMIYPPAKWQDYEMGGYYLRPTHLMRFEDSQLQ----EKSLFNTDLSKVYEILNIIGKT 350
Query: 478 KWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENN 537
WRIN+R+L+V+ +IW GG + + + + + +K + K + K
Sbjct: 351 PWRINKRVLNVMEKIWEEGGDIGE-IPKKYYDYTNYIHQYQVDECKDYKEKAKLMRKIQQ 409
Query: 538 ER--HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEF 595
+R HS R + LKL VAR + Y+PHNVDFRGR YP+ P+LNH+G+D CRG+LEF
Sbjct: 410 QRDIHSNRSDFLLKLKVARAFQNLDRIYFPHNVDFRGRLYPIPPHLNHIGADRCRGLLEF 469
Query: 596 AEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWL 655
+E + +GK+G WLK+H +NL GVDKL ++ RVA+TE+ +++ A P++ R W L
Sbjct: 470 SESKRIGKTGWYWLKVHTSNLL--GVDKLSFDQRVAYTESQFENIKRWASDPIKNREW-L 526
Query: 656 EAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNL 715
+ ED Q L+A +SEAL+ PE ISH+ VHMDGSCNGLQHYAA+GRDK GA VNL
Sbjct: 527 QVEDCWQALSAIFEVSEALQLENPEDHISHLHVHMDGSCNGLQHYAAIGRDKYGAEQVNL 586
Query: 716 VRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYG 775
+P D+YS +AS V + + +D + + N Q+ RK+VKQTVMTSVYG
Sbjct: 587 RDSIKPGDLYSHVASMVEQKIDEDCKNELSEN--YEIAKKLQGQIKRKIVKQTVMTSVYG 644
Query: 776 VTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAK 835
VT+VGAR QI R+LK+R + ++ + AS Y A TL ++ +F A I WL CA
Sbjct: 645 VTFVGARQQILRQLKDRDFMNEEDN-YKASYYLATVTLLQIKNLFTQAHYIKKWLISCAA 703
Query: 836 VIASTNEPVRWTTPIGLPAVQPYR-QIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFP 892
+I++T PV W T +GLP VQPYR Q ++I T +Q +++ D++ + ++Q +AFP
Sbjct: 704 LISATGNPVSWITDMGLPVVQPYRNQSTLNVINTVIQKITIEANHDELPINKQKQRSAFP 763
Query: 893 PNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 952
PN++HSLD +H+M TA+ C K G+ FA VHDSYWTHA DV+ ++ +LR++FV+L+ P+L
Sbjct: 764 PNYIHSLDSTHLMYTAIECNKLGIYFAAVHDSYWTHAADVEILHDVLRKQFVKLHSQPLL 823
Query: 953 ENLLESFQKSFPKLNFPPLPERGDFDLREV 982
E+L SFQ+ FP ++FP +P+RG+ +L +V
Sbjct: 824 EDLRNSFQRRFPTIDFPEIPKRGELNLEDV 853
>L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizoctonia solani AG-1 IA
GN=AG1IA_03910 PE=3 SV=1
Length = 1371
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/694 (41%), Positives = 423/694 (60%), Gaps = 57/694 (8%)
Query: 326 IIKGLDDWKP-WGQEARAKVGCRVMQLLIETAYIQ-SPVSQLGGSPPDIRPAFKHTFKTA 383
I+ ++ P W Q R +VG ++ ++ +AYI+ + ++ G + + +PAF H+++
Sbjct: 556 IVANMESSMPEWTQVVRVRVGSFLVDSVMNSAYIKRNGTNESGENLCEEQPAFMHSYEYV 615
Query: 384 MADSQKDIRRYGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYLFLPS 441
++ G+I+ +P+V + + + + + P +LPMLV P W YDKG YL LP+
Sbjct: 616 RG------KKLGVIKLNPVVGEKMARDPIRETLHPRHLPMLVKPQPWEDYDKGGYLKLPT 669
Query: 442 YVMRTHGAKQQCEAVKRA-PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLA 500
VMR + +Q +K A ++ ++E LD+LG T WRIN ++L+V+ Q+W G +A
Sbjct: 670 -VMRIKDSPEQLSYLKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEGKGMA 728
Query: 501 DLVD-RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
+ + D+ + ++K+I+ + H +RC + KL VAR + +E
Sbjct: 729 GIPPIQLDIEEPPKPEEDDPRARATYLLKLKSILTDKRNNHGERCNVNYKLEVARFVNDE 788
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY PHN+DFRGRAYP+ P+LNH+G DLCRG+L FAE RPLG+ GLRWLKIHLAN++
Sbjct: 789 --FYMPHNLDFRGRAYPIPPHLNHIGDDLCRGLLLFAERRPLGERGLRWLKIHLANVF-- 844
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK ++ RV F E HL+++ DSA+ PL G++WWL+A+DP QCL+ C+ L+EAL+ P P
Sbjct: 845 GYDKASFDERVLFVEKHLEEIRDSAENPLNGKQWWLKADDPWQCLSTCMELTEALKGPVP 904
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
E S++PVH DG+CNGLQHYAALG D GA VNL +GDRPADVYS +A V ++ +D
Sbjct: 905 ELYRSNLPVHQDGTCNGLQHYAALGGDAAGAQHVNLEQGDRPADVYSHVARMVDVVVDED 964
Query: 740 AEKD-PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDD 798
A PE ++ RK+VKQTVMT+VYGVT++GARDQI+++L++ + +
Sbjct: 965 AALGIPEAK-------VVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRDIVGLSRE 1017
Query: 799 SELFSASCYAAKT-TLTALEEMFEAARSIMSWLADCAKVIAST--------------NEP 843
E + + Y AKT L A+ ++F A I +WL+ A++IA + E
Sbjct: 1018 -ESWPVAAYLAKTQVLGAIGDLFSGASQIQNWLSISARLIAKSIPSDRMPTVLSATPREA 1076
Query: 844 VR-------WTTPIGLPAVQPYRQIGRSIIKTSLQVL-----SLRRETDKVLVKRQSTAF 891
R WTT +GLP VQPYR+ + I T+LQ + +L + D V +QS AF
Sbjct: 1077 ARERMTSVIWTTALGLPIVQPYRKAKKKQILTALQSVFISDPNLPTQVDPV---KQSAAF 1133
Query: 892 PPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 951
PPNFVHSLD +HMM+TA+ C+ + + FA VHDSYWTHA VD+M+ I+R+ F+ L+ + I
Sbjct: 1134 PPNFVHSLDATHMMLTALECRASSITFASVHDSYWTHASTVDDMSAIIRDTFIALHSSNI 1193
Query: 952 LENLLESFQKSFPKLNFPPLPERGDFDLREVLNS 985
L+ L E F + + PL D +L +L S
Sbjct: 1194 LQKLREEFLDRYKEYRV-PLSTLTDRELCSILPS 1226
>N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeria graminis f. sp.
hordei DH14 GN=BGHDH14_bgh06417 PE=4 SV=1
Length = 1434
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/694 (38%), Positives = 394/694 (56%), Gaps = 82/694 (11%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
KPW +AKVG +M L+E A + + V + ++ AF H A K
Sbjct: 534 KPWPLPLKAKVGAVLMSHLMEVAKVSARVKHPETNEELVQVQSAFTH------AHQYKKG 587
Query: 392 RRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
++ GI+ + ++ + L++ +++ +LPM+V P++W ++KG Y+ P+ +MR G
Sbjct: 588 KKTGIVIMNKVLIEQLQREPVHSLLAKHLPMVVEPDDWRGFEKGGYIVYPARIMRIKQGD 647
Query: 450 KQQ---CEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLAD---LV 503
++Q CEA ++ + + L+ LG T WRINQ++ D++ Q W +G +A+ L
Sbjct: 648 EEQRHYCEAA--ISQGEMSKVVQGLNVLGKTSWRINQQVFDIMLQAWNTGEAIANFPPLN 705
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
+ DV R W R+VK HSQRC +L +A+ +K+ K FY
Sbjct: 706 PKIDVPPEPVSTTDPLERGR-WIRKVKIAQNIKTGMHSQRCFQNFQLEIAQALKD-KEFY 763
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PHNVDFRGRAYP+ PYLNH+G+D CRG+L F G+ LG+SGL+WLKIH++N+Y G DK
Sbjct: 764 FPHNVDFRGRAYPLPPYLNHIGADHCRGLLIFGRGKQLGESGLKWLKIHISNVY--GYDK 821
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ R +FT + L++++DSA P+ G++WWLEAEDP QCLAACI L AL SP P +
Sbjct: 822 ASLQDRESFTSSKLEEIYDSALNPMNGKKWWLEAEDPWQCLAACIELKNALESPDPTKFV 881
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH+PVH DG+CNGLQHYAALG D GA VNL G++PADVYS +A +++R D KD
Sbjct: 882 SHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGEKPADVYSAVA----DLVRIDIAKD 937
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI------ED 797
E + ++ RK VKQTVMT+VYGVT++GA Q++++L E
Sbjct: 938 KEAGN--PLAAALEGKITRKTVKQTVMTNVYGVTFIGASAQVRKQLAASQTTPSIDQPES 995
Query: 798 DSE-LFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST---------------- 840
+S+ + + Y A+ TAL MF A I WLA+CA I ++
Sbjct: 996 ESQNRHNDAAYVARKIFTALSTMFRGAHDIQYWLAECATRITTSLNAQQISRLEAEWDNL 1055
Query: 841 -----------------------------NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ 871
V WT+P+GLP VQPYR + +++T++Q
Sbjct: 1056 YKSHIESLESESNGKKSSRHSKIDDMLMFKSGVIWTSPLGLPVVQPYRTLKGKVVRTNMQ 1115
Query: 872 VLSL--RRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHA 929
++L + V ++Q FPPNF+HSLD SHM+++A+ C K GL FA VHDS+WTHA
Sbjct: 1116 NINLCEPSKNSPVSKRKQLQGFPPNFIHSLDASHMILSAIGCDKLGLSFAAVHDSFWTHA 1175
Query: 930 CDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
CD+D MN +LRE F+E++ I+ L F+ +
Sbjct: 1176 CDIDVMNNVLRESFIEIHSEDIIGRLSSEFKARY 1209
>G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00004g535 PE=3 SV=1
Length = 1466
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/676 (40%), Positives = 383/676 (56%), Gaps = 72/676 (10%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY- 394
W Q RAKVG ++ LL + A I+ P + KH K D + Y
Sbjct: 603 WSQPVRAKVGSVLVSLLFQVAKIKVR--------PTNKKVLKHMDKDLAIDQPALVHGYQ 654
Query: 395 -------GIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
G+I +K L E + LPM+ P W ++ GAY F P+ ++R
Sbjct: 655 FVGGKKIGVIRLHDEFSKKLMTEPLKGTTLAKQLPMIAKPRPWCAWNDGAYYFTPTRMVR 714
Query: 446 THGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL-- 502
+ +Q VK A + L+ +F LD LG+T W INQ++ DVI Q+W +G + AD+
Sbjct: 715 VKDSLEQTMYVKEASKHGNLDRLFTGLDVLGSTAWTINQKVFDVILQVWNTGDKFADIPP 774
Query: 503 ---VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEE 559
D + K Q ++++N+ HSQRC++ KL +AR E
Sbjct: 775 TFEKDVNMPEMPQPNADAAAKAAFKIAYQEMALIRKNH--HSQRCDVNFKLEIARAFYNE 832
Query: 560 KGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 619
FY+PHNVDFRGRAY M P+LNHLG+DLCRG+L+F+E +PLG+SGLRWLKIHL+NL G
Sbjct: 833 V-FYFPHNVDFRGRAYAMPPHLNHLGNDLCRGLLKFSEKKPLGESGLRWLKIHLSNL--G 889
Query: 620 GVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTP 679
G DK +R + E+ ++DVFDSA PL G+RWWLE+EDP Q LA C+ L A+ S P
Sbjct: 890 GYDKASLMAREEWAESRMEDVFDSARDPLGGKRWWLESEDPWQMLATCMELEAAMSSKDP 949
Query: 680 ETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKD 739
S++PVH DG+CNGLQHYAALG D +GA VNL D+P DVY+G+A V + + +D
Sbjct: 950 LKYESNMPVHQDGTCNGLQHYAALGGDIVGAKQVNLEPADKPQDVYTGVADLVNQAVAED 1009
Query: 740 AEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDS 799
A+ E ++RK+VKQTVMT+VYGVT++GA++Q+K RL E+ D
Sbjct: 1010 AQNGNE------LAKDLLGHINRKVVKQTVMTNVYGVTFIGAKNQVKSRLMEKGVWPRD- 1062
Query: 800 ELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP---------------- 843
+ S Y K T+L+ MF A I W +CAK I+ + P
Sbjct: 1063 RVDKLSIYLTKKIFTSLQSMFTGAHLIQKWFGECAKRISRSVSPTQYASFAEHYTGVIPT 1122
Query: 844 ------------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRET--DKVL 883
V WTTP+GLP VQPYR +KT+LQ +++ + ++V
Sbjct: 1123 TGRQAHTKERGKAEFMTSVVWTTPLGLPVVQPYRHDATVAVKTNLQQITIVDTSIINQVN 1182
Query: 884 VKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
+RQ AFPPN++HSLD +HM+++A+A K+AGL FA VHDS+WTH+CDVD M+R+LR+ F
Sbjct: 1183 SRRQMGAFPPNYIHSLDATHMLLSAMASKQAGLTFAAVHDSFWTHSCDVDTMSRVLRDAF 1242
Query: 944 VELYEAPILENLLESF 959
VEL+ ++ L E F
Sbjct: 1243 VELHSEDLVSKLREEF 1258
>D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniella heveanensis
GN=RPO41 PE=3 SV=1
Length = 1256
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/681 (38%), Positives = 392/681 (57%), Gaps = 66/681 (9%)
Query: 335 PWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPP------DIRPAFKHTFKTAMADSQ 388
PW Q A+ VG ++ L++ A ++ ++G +P + +PAF H ++
Sbjct: 438 PWSQMAQLGVGSELVDALLKVAKVE----RVGRNPETGEEVVEEQPAFTHAYEYIRG--- 490
Query: 389 KDIRRYGIIECDPLVTKGLEKSAKNMVI--PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
++ G+I+ +P+V L + + +VI +LPMLV P WT ++ G YL +MR
Sbjct: 491 ---KKLGVIKHNPVVAARLARDSVGVVIHPKHLPMLVEPKPWTSHNNGGYLLHSVPIMRY 547
Query: 447 HGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
+ +Q +K A LEP+F LD L +T W IN+++ DVI +W SG +AD+
Sbjct: 548 KESAEQQSYLKTASEQGHLEPVFHGLDVLSSTAWSINRKVFDVILNVWNSGEAIADIPAS 607
Query: 506 D-----DVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEK 560
+ DV + ++K++M + H++RC+ L +AR +
Sbjct: 608 EEKSTYDVPEKPDPRDQDPQKRSLYIERMKSVMAAQRKDHAERCKFNYNLEIARSYLNDV 667
Query: 561 GFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGG 620
FY PHN+DFRGRAYP+ P+L+ +G DLCRG+L F + LG++GL+WL IHLAN+Y G
Sbjct: 668 -FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNKKALGETGLKWLHIHLANVY--G 724
Query: 621 VDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPE 680
DK +E R F + H D+FDSAD PL+G+RWWL+AEDP QCLA C ++ ALRS P
Sbjct: 725 FDKASFEERARFAQEHEADIFDSADNPLDGKRWWLQAEDPWQCLATCFEIAAALRSSDPT 784
Query: 681 TTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA 740
S +P+H DG+CNG+QHYAALG D GA AVNL GDRPAD+Y+G+ + V +++ +D
Sbjct: 785 QYESSLPIHQDGTCNGMQHYAALGGDVRGAKAVNLEHGDRPADIYTGVVNIVNKVIEEDQ 844
Query: 741 EKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSE 800
+K + + RK+VKQTVMT+VYGVT+VGAR+QI ++L R +
Sbjct: 845 KKGLDV------ALLIKKPLGRKVVKQTVMTTVYGVTFVGAREQIAKQLTARGDFAQE-H 897
Query: 801 LFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR--------------- 845
+F S Y AKT L + ++F A++IM WL AK+I+ + P R
Sbjct: 898 VFLVSGYIAKTVLNCIGDLFSGAKAIMDWLTTSAKLISRSVPPERVEEAANNLTTTLRNG 957
Query: 846 ---------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQS 888
WTTP+GLP VQPYR+ + I T+LQ + + +V ++Q+
Sbjct: 958 KVKSRAAREFMTSVVWTTPLGLPVVQPYRKAQKKQIMTALQTVYISDPNAPSEVSPQKQA 1017
Query: 889 TAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYE 948
TAFPPNF+HSLD +HM++TA+ C++ + FA VHDSYWTHA V+ M+ ++R+ F+ L+
Sbjct: 1018 TAFPPNFIHSLDATHMLLTALKCRQNEIAFASVHDSYWTHASTVESMSDLIRDTFIHLHS 1077
Query: 949 APILENLLESFQKSFPKLNFP 969
++ L + F + + + P
Sbjct: 1078 QDLVGELRDEFIQRYGEHRIP 1098
>G3SPD8_LOXAF (tr|G3SPD8) DNA-directed RNA polymerase (Fragment) OS=Loxodonta
africana GN=POLRMT PE=3 SV=1
Length = 1215
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/683 (39%), Positives = 391/683 (57%), Gaps = 52/683 (7%)
Query: 343 KVGCRVMQLLIETAY----IQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIE 398
++G ++ ++L+ + + +P + G+ P I P H + S + +R+ GI++
Sbjct: 550 QLGKQLAEVLVRAVHMPRNLGAPAGKGAGTEPLI-PVLYHVY------SFRSVRQIGILK 602
Query: 399 CDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGAKQQCE 454
P ++ L +A+ + +PML PP WT GA+L P+ +MR G +
Sbjct: 603 PHPAFSQLLAAAAEPTLTFEAAEVPMLCPPLPWTSPHSGAFLLSPAKLMRAVEGTMLHQQ 662
Query: 455 AVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RLA---DLVDRDDVX 509
++ P L F+AL LGN WR+N R+LD++ +++ + G RL D
Sbjct: 663 RLEHCPPAALHGAFDALTQLGNCAWRVNGRVLDLVLELFHAHGCTRLGVPPPASDAPCPP 722
Query: 510 XXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVD 569
+ + +R+V +K E S R + +L++A+ ++ F+ PHN+D
Sbjct: 723 ARRPPPGTPPARLAELRREVARCLKAARELRSLRADALYRLSLAQHLRHHGAFWLPHNMD 782
Query: 570 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESR 629
FRGR YP P+L+HLGSDL R +LEFA+G PLG GL WLK+HL NL G + ++R
Sbjct: 783 FRGRTYPCPPHLSHLGSDLARALLEFAQGCPLGPHGLDWLKLHLVNL-TGLKKRESLQAR 841
Query: 630 VAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVH 689
+AF + LD+V DSADRP+ GR+WW+EA++P Q LA C+ L+ ALRSP P + +SH PVH
Sbjct: 842 LAFADQVLDEVLDSADRPMTGRKWWMEADEPWQTLACCMELARALRSPDPTSFVSHFPVH 901
Query: 690 MDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSX 749
DGSCNGLQHYAALGRD +GAA+VNL D P DVYSG+A++V R+DAE+
Sbjct: 902 QDGSCNGLQHYAALGRDSVGAASVNLTPSDLPQDVYSGVAAQVEVFRRQDAEQGVRVAQV 961
Query: 750 XXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELF--SASCY 807
V RK+VKQTVMT VYGVT G R QI++RL+E + D + F AS Y
Sbjct: 962 LEGF------VSRKVVKQTVMTVVYGVTRYGGRLQIEKRLRE---LPDFPQEFVWEASHY 1012
Query: 808 AAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIK 867
+ +L+EMF A R+I WL + A++I+ T V W TP+G+P +QPY +I + +IK
Sbjct: 1013 LVRQVFNSLQEMFSATRAIQHWLTESARLISHTGSAVEWVTPLGIPIIQPYHRISKFLIK 1072
Query: 868 TSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDS 924
+Q ++ +D + +Q FPPNF+HSLD SHMM+TA+ C + GL F VHD
Sbjct: 1073 GGIQSMTFNHSSDSSQRPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSVHDC 1132
Query: 925 YWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF---PKL--------------N 967
+WTHA DV MN++ RE+FV L+ PIL +L K F P+
Sbjct: 1133 FWTHAADVPVMNQVCREQFVRLHSQPILRDLSRFLVKRFCSAPRSQNLSKNAQTRKLFET 1192
Query: 968 FPPLPERGDFDLREVLNSQYFFN 990
LPE GDFDL +V S YFF+
Sbjct: 1193 LLALPETGDFDLEQVKQSTYFFS 1215
>F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=2
Length = 1221
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/686 (39%), Positives = 390/686 (56%), Gaps = 45/686 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G R+ +LL+ET I ++ G+ I P H + S + R+
Sbjct: 552 QPWPLPVLVELGKRLAELLVETVRIPGSLAAPQGACTLI-PVLYHVY------SFRSFRQ 604
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
GI++ P T+ L +A++ +I +PML PP WT GA+L P+ +MR+ G
Sbjct: 605 IGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLEGT 664
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RL---ADLVD 504
Q + P +L +AL LGN WR+N R+LD++ +++ + G RL A +
Sbjct: 665 MQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPPSE 724
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ +R++ +K E HS R + +L++A+ ++ + F+
Sbjct: 725 APRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLRH-RVFWL 783
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIHL NL G
Sbjct: 784 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKKHE 842
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
++R+ F + +DD+ DSADRP+ GR+WW+E ++P Q LA C+ ++ A+RSP P +S
Sbjct: 843 PLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTAFVS 902
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V R+DA++
Sbjct: 903 HFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQRGV 962
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ RK+VKQTVMT VYGVT G R QI+RRL+E + ++ A
Sbjct: 963 RVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQEF-VWEA 1015
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF R+I WL + A++IA T V W TP+G+P +QPY + +
Sbjct: 1016 SHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRDSKV 1075
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+I +Q L+ D K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1076 MIGGGIQSLTFSNSGDTTQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV 1135
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILEN----LLESFQKSFPKLNFP-------- 969
HD +WTHA DV MN++ RE+FV L+ PIL N L+E F S L P
Sbjct: 1136 HDCFWTHAADVAVMNQVCREQFVHLHSQPILHNLSRFLVERFCCSSRSLKHPKDSWISKL 1195
Query: 970 -----PLPERGDFDLREVLNSQYFFN 990
+PE G FDL +V +S YFF+
Sbjct: 1196 QDTLKAVPETGAFDLEQVKHSTYFFS 1221
>J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_00271 PE=3 SV=1
Length = 1385
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 306/897 (34%), Positives = 456/897 (50%), Gaps = 116/897 (12%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPY----MKSLFLGWFEPLKSAIVA 189
+R+RQ+++E ++ A + +++ + ++ P+ P + + W + L ++I
Sbjct: 363 IRERQLRLEQDSVIAAMERWRK---ESAQRNSRPSNPTGGDKLGGVLWDWHQSLLTSIEG 419
Query: 190 E-QEVCKKSHRKMT---------HAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCA 237
E Q + K +K +AP+ N + D++A IT+ M L + GI
Sbjct: 420 EIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKGIRLT 479
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
R+I + +G A++ E E P A +++G+ +
Sbjct: 480 RLI---MLLGRAVQEE--------------YVTDRIQETPSKS---APLDSGRRA--KLV 517
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
SLI +K ++ IK W AK+G + +L +
Sbjct: 518 QDLIPSNRGRKGVRESLI--EKYNEIHEPIK-------WSAAVEAKIGSLLASMLFSSTK 568
Query: 358 IQSPVSQLGGSPPDI----RPAFKHTFKTAMADSQKDIRRYGIIEC-DPLVTKGLEKSAK 412
+ V Q +I +PAF+H ++ S G + D +V + + A
Sbjct: 569 VV--VKQQNTETGEITFVKQPAFRHVYQLEKGHS------VGFVHIHDSVVDRFRREPAS 620
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC---EAVKRAPY-NQLEPIF 468
+++ +LPM+ PP WT Y G +L P+ +MR QC + V+ A L+ IF
Sbjct: 621 SLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIF 680
Query: 469 EALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD-DVXXXXXXXXXXXXXIRKWKR 527
L+ LG T WRIN+ + DV+ + W SG LAD+ D ++ +R + R
Sbjct: 681 AGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAYYR 740
Query: 528 QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
+ + + HSQRC L+L +AR E FY PHN+DFRGRAYP+ PY N +G D
Sbjct: 741 SKTLVDNKRSGLHSQRCFQNLQLEIARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPD 799
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
+CRG+L F++GR LG+ GLRWLKIH+AN+Y G DK ++ R F +HLDDV DSA++
Sbjct: 800 MCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKG 857
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
L GRRWWLEA DP QCLAACI L AL P P ISH+P+H DGSCNGLQHYAALG D
Sbjct: 858 LNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDI 917
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQ 767
+GA VNL DRP+D+YS +A V + + ++A + +V+RK+VKQ
Sbjct: 918 IGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAA------AGNQLAKILEDKVNRKIVKQ 971
Query: 768 TVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSASCYAAKTTLTALEEMFEAARSI 826
TVMT+VYGVT++GA Q++++L + + + + + Y + AL MF A I
Sbjct: 972 TVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHEI 1031
Query: 827 MSWLADCAKVIASTNEP------------------------------------VRWTTPI 850
WL DCA I + P V WTTP+
Sbjct: 1032 QFWLGDCANRITQSLGPEQIEALEAARHVPISGTSKAKKKAIIDDLSKRFLSTVIWTTPL 1091
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
LP VQPYR+ + T+LQ LS++ +D V ++Q AFPPNF+HSLD +HMM++A
Sbjct: 1092 KLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVVNRRKQLQAFPPNFIHSLDATHMMLSA 1151
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPK 965
+ C + GL F+ VHDS+WTHA D+D MNR+LR+ FV ++ I+ L F+ + K
Sbjct: 1152 IKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDAFVRMHSEDIVGRLASEFKARYSK 1208
>E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_05010 PE=3 SV=1
Length = 1385
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 306/897 (34%), Positives = 456/897 (50%), Gaps = 116/897 (12%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPY----MKSLFLGWFEPLKSAIVA 189
+R+RQ+++E ++ A + +++ + ++ P+ P + + W + L ++I
Sbjct: 363 IRERQLRLEQDSVIAAMERWRK---ESAQRNSRPSNPTGGDKLGGVLWDWHQSLLTSIEG 419
Query: 190 E-QEVCKKSHRKMT---------HAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCA 237
E Q + K +K +AP+ N + D++A IT+ M L + GI
Sbjct: 420 EIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKGIRLT 479
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
R+I + +G A++ E E P A +++G+ +
Sbjct: 480 RLI---MLLGRAVQEE--------------YVTDRIQETPSKS---APLDSGRRA--KLV 517
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
SLI +K ++ IK W AK+G + +L +
Sbjct: 518 QDLIPSNRGRKGVRESLI--EKYNEIHEPIK-------WSAAVEAKIGSLLASMLFSSTK 568
Query: 358 IQSPVSQLGGSPPDI----RPAFKHTFKTAMADSQKDIRRYGIIEC-DPLVTKGLEKSAK 412
+ V Q +I +PAF+H ++ S G + D +V + + A
Sbjct: 569 VV--VKQQNTETGEITFVKQPAFRHVYQLEKGHS------VGFVHIHDSVVDRFRREPAS 620
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC---EAVKRAPY-NQLEPIF 468
+++ +LPM+ PP WT Y G +L P+ +MR QC + V+ A L+ IF
Sbjct: 621 SLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIF 680
Query: 469 EALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD-DVXXXXXXXXXXXXXIRKWKR 527
L+ LG T WRIN+ + DV+ + W SG LAD+ D ++ +R + R
Sbjct: 681 AGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAYYR 740
Query: 528 QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
+ + + HSQRC L+L +AR E FY PHN+DFRGRAYP+ PY N +G D
Sbjct: 741 SKTLVDNKRSGLHSQRCFQNLQLEIARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPD 799
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
+CRG+L F++GR LG+ GLRWLKIH+AN+Y G DK ++ R F +HLDDV DSA++
Sbjct: 800 MCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKG 857
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
L GRRWWLEA DP QCLAACI L AL P P ISH+P+H DGSCNGLQHYAALG D
Sbjct: 858 LNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDI 917
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQ 767
+GA VNL DRP+D+YS +A V + + ++A + +V+RK+VKQ
Sbjct: 918 IGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAA------AGNQLAKILEDKVNRKIVKQ 971
Query: 768 TVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSASCYAAKTTLTALEEMFEAARSI 826
TVMT+VYGVT++GA Q++++L + + + + + Y + AL MF A I
Sbjct: 972 TVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHEI 1031
Query: 827 MSWLADCAKVIASTNEP------------------------------------VRWTTPI 850
WL DCA I + P V WTTP+
Sbjct: 1032 QFWLGDCANRITQSLGPEQIEALEAARQVPISGTSKAKKKAIIDDLSKRFLSTVIWTTPL 1091
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
LP VQPYR+ + T+LQ LS++ +D V ++Q AFPPNF+HSLD +HMM++A
Sbjct: 1092 KLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVVNRRKQLQAFPPNFIHSLDATHMMLSA 1151
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPK 965
+ C + GL F+ VHDS+WTHA D+D MNR+LR+ FV ++ I+ L F+ + K
Sbjct: 1152 IKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDAFVRMHSEDIVGRLASEFKARYSK 1208
>C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_059100 PE=3 SV=1
Length = 1385
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 306/897 (34%), Positives = 456/897 (50%), Gaps = 116/897 (12%)
Query: 134 LRKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPY----MKSLFLGWFEPLKSAIVA 189
+R+RQ+++E ++ A + +++ + ++ P+ P + + W + L ++I
Sbjct: 363 IRERQLRLEQDSVIAAMERWRK---ESAQRNSRPSNPTGGDKLGGVLWDWHQSLLTSIEG 419
Query: 190 E-QEVCKKSHRKMT---------HAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCA 237
E Q + K +K +AP+ N + D++A IT+ M L + GI
Sbjct: 420 EIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITILATMNALGKTGMNKGIRLT 479
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXX 297
R+I + +G A++ E E P A +++G+ +
Sbjct: 480 RLI---MLLGRAVQEE--------------YVTDRIQETPSKS---APLDSGRRA--KLV 517
Query: 298 XXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAY 357
SLI +K ++ IK W AK+G + +L +
Sbjct: 518 QDLIPSNRGRKGVRESLI--EKYNEIHEPIK-------WSAAVEAKIGSLLASMLFSSTK 568
Query: 358 IQSPVSQLGGSPPDI----RPAFKHTFKTAMADSQKDIRRYGIIEC-DPLVTKGLEKSAK 412
+ V Q +I +PAF+H ++ S G + D +V + + A
Sbjct: 569 VV--VKQQNTETGEITFVKQPAFRHVYQLEKGHS------VGFVHIHDSVVDRFRREPAS 620
Query: 413 NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQC---EAVKRAPY-NQLEPIF 468
+++ +LPM+ PP WT Y G +L P+ +MR QC + V+ A L+ IF
Sbjct: 621 SLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIF 680
Query: 469 EALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD-DVXXXXXXXXXXXXXIRKWKR 527
L+ LG T WRIN+ + DV+ + W SG LAD+ D ++ +R + R
Sbjct: 681 AGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAYYR 740
Query: 528 QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
+ + + HSQRC L+L +AR E FY PHN+DFRGRAYP+ PY N +G D
Sbjct: 741 SKTLVDNKRSGLHSQRCFQNLQLEIARAYVGET-FYLPHNMDFRGRAYPLPPYFNQMGPD 799
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
+CRG+L F++GR LG+ GLRWLKIH+AN+Y G DK ++ R F +HLDDV DSA++
Sbjct: 800 MCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEKG 857
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
L GRRWWLEA DP QCLAACI L AL P P ISH+P+H DGSCNGLQHYAALG D
Sbjct: 858 LNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGDI 917
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQ 767
+GA VNL DRP+D+YS +A V + + ++A + +V+RK+VKQ
Sbjct: 918 IGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAA------AGNQLAKILEDKVNRKIVKQ 971
Query: 768 TVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSASCYAAKTTLTALEEMFEAARSI 826
TVMT+VYGVT++GA Q++++L + + + + + Y + AL MF A I
Sbjct: 972 TVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHEI 1031
Query: 827 MSWLADCAKVIASTNEP------------------------------------VRWTTPI 850
WL DCA I + P V WTTP+
Sbjct: 1032 QFWLGDCANRITQSLGPEQIEALEAARQVPISGTSKAKKKAIIDDLSKRFLSTVIWTTPL 1091
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTA 908
LP VQPYR+ + T+LQ LS++ +D V ++Q AFPPNF+HSLD +HMM++A
Sbjct: 1092 KLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVVNRRKQLQAFPPNFIHSLDATHMMLSA 1151
Query: 909 VACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPK 965
+ C + GL F+ VHDS+WTHA D+D MNR+LR+ FV ++ I+ L F+ + K
Sbjct: 1152 IKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDAFVRMHSEDIVGRLASEFKARYSK 1208
>M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (strain DJM 731)
GN=DACRYDRAFT_54516 PE=4 SV=1
Length = 988
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/682 (40%), Positives = 394/682 (57%), Gaps = 65/682 (9%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI--QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
W Q R +VG ++ +I+ A I + G + +PAF H ++ R+
Sbjct: 195 WTQVIRGRVGGFLLNAVIDVATITRRGIRPSTGEEVSEEQPAFAHCYEFLHG------RK 248
Query: 394 YGIIECDPLVTKGLE-KSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ 451
G+I+ +P +T+ L + K+ + P LPML+PP W ++GAY++ + VMR + +
Sbjct: 249 IGLIKFNPELTEQLSSEPIKDALHPRQLPMLIPPRPWIDVERGAYMYSRTSVMRYKDSLE 308
Query: 452 QCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLAD-----LVDR 505
Q ++ A LE ++ ALD LG+T W IN+ + DV+ +W SG + A L
Sbjct: 309 QSSFLRSASSAGHLESMYAALDVLGSTPWTINRPIFDVVIAVWNSGKQFAKIPPAGLEGE 368
Query: 506 DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYP 565
D V R + R + T +++ +E HS RC+ KL +AR E+ FY+P
Sbjct: 369 DPVKPDNYETDPKAK--RDFVRAMSTSIQKRHENHSMRCDTNYKLEIARAFLGER-FYFP 425
Query: 566 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLC 625
HNVDFRGRAYP+ P LNH+G DLCRG+L FA+ + LG+ GLRWLKIH AN + G DK
Sbjct: 426 HNVDFRGRAYPVPPNLNHMGDDLCRGLLTFADKKALGERGLRWLKIHAANKF--GYDKAS 483
Query: 626 YESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
+E RV +T HLD+++DSA +PL+G+RWWL+A+DP Q LA+CI L AL SP P S
Sbjct: 484 FEERVTWTMEHLDEIYDSAKKPLDGQRWWLKADDPWQFLASCIELHNALESPNPAEFESS 543
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
+PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+ +A+ V + + + A K E
Sbjct: 544 LPVHQDGTCNGLQHYAALGGDGQGARQVNLDVGDRPADVYTFVANMVEKRLDEAAAKGDE 603
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIE-DDSELFSA 804
++ RK+VKQTVMT+VYGVT+VGARDQI+++++ + + E ++
Sbjct: 604 ------KAKWLQGRIARKVVKQTVMTTVYGVTFVGARDQIRKQIEALPGVSISEQESYAM 657
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR------------------- 845
+ Y A+ TL+ + ++F A+SI WL +I + P R
Sbjct: 658 AVYVARLTLSCIGDLFGGAKSIQLWLNKVCALITKSIPPERIDLLLRDKEYAGEVRNAPM 717
Query: 846 ----------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRET--DKVLVKRQ 887
WTTP+G+P VQPYR+ + I TSLQ L + +V ++Q
Sbjct: 718 KRTYTSLVKEQMTSMIWTTPLGMPVVQPYRKQAKKQIYTSLQSLFIADPNLPMEVSSRKQ 777
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
++AFPPNF+HSLD +HMM+TA+ C+ L FA VHDSYWTHA +DEM+ +R+ FV+L+
Sbjct: 778 ASAFPPNFIHSLDATHMMLTALGCRDKQLTFASVHDSYWTHAASIDEMSATIRDTFVKLH 837
Query: 948 EAPILENLLESFQKSFPKLNFP 969
A IL NLL Q+ + P
Sbjct: 838 SADILGNLLLEIQQRYKDYKVP 859
>G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomium thermophilum
(strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0035550 PE=3 SV=1
Length = 1394
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/672 (39%), Positives = 387/672 (57%), Gaps = 61/672 (9%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W RAKVG ++ ++ETA I PV++ ++PAF H + +
Sbjct: 548 WPTAIRAKVGALLLTAMMETAKIMVVRDHPVTKEKVH--QLQPAFSHAMQL------RKG 599
Query: 392 RRYGIIECDPLVTKGLEKSAK-NMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMR--THG 448
++ GII+ +P + + L++ + ++ +LPMLV P WT++DKG +L S ++R H
Sbjct: 600 KKVGIIQANPELVEILKREPRAELLARHLPMLVEPEPWTKFDKGGFLECQSPLIRLKNHE 659
Query: 449 AKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV 508
+Q+ A +E + LD LG T WRIN+++ DV+ +W G A++
Sbjct: 660 IEQKIYAEAAIERGDMEQMMRGLDVLGKTAWRINRKVFDVMLTVWNEGIAFANIPALHPN 719
Query: 509 XXXXXXXXXXXXXIRK--WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
++K W RQVK I E + HS RC + +L +AR ++ FY+PH
Sbjct: 720 IPIPPEPDSSDDPMKKRIWMRQVKAIQNEKSGMHSVRCFMNFQLEIARAFIDQT-FYFPH 778
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
N+DFRGRAYP+ PYLNH+G+D RG+L FA+G+PLG++GLRWLKIHLAN+Y G DK
Sbjct: 779 NLDFRGRAYPLPPYLNHMGADHMRGMLLFAKGKPLGENGLRWLKIHLANVY--GYDKASL 836
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHV 686
+ R F +++L ++ DSA PL G+RWWL+ EDP QCLA C L+ AL+SP P +SH+
Sbjct: 837 DDREKFADDNLANIMDSASNPLGGKRWWLQGEDPWQCLATCFELAAALQSPDPTQFVSHL 896
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GA VNL+ G++PADVYS +A V E++ KDA E
Sbjct: 897 PVHQDGTCNGLQHYAALGGDTWGAQQVNLIPGEKPADVYSAVAQLVQEMVTKDAAAGNE- 955
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSA- 804
++ RK+VKQTVMT+VYGVT+VGA+ Q++++L +E + ++
Sbjct: 956 -----FAKALDGKITRKVVKQTVMTNVYGVTFVGAKRQVQKQLDALYPNLESQTGCSTSI 1010
Query: 805 -SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP-------------------- 843
S Y A AL MF A +I SWL + + P
Sbjct: 1011 LSSYMATKIFAALGTMFSGAYAIQSWLGEIGDRVCRAITPEQLNRIEAEATGESKKKFTD 1070
Query: 844 ----------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAF 891
+ WTTP+ +P VQPYR+ G ++ T LQ L+L+ D V ++Q AF
Sbjct: 1071 AELNNTFRNTIVWTTPLRMPVVQPYRKSGTRVVPTCLQDLALQVSDRDDPVNRRKQLQAF 1130
Query: 892 PPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 951
PPNF+HSLD SHMM++A+ C + GL FA VHDS+WTHA DVD+M++++RE F+ ++ +
Sbjct: 1131 PPNFIHSLDASHMMLSALECHELGLTFAAVHDSFWTHAADVDKMSKVIRESFIRIHSEDV 1190
Query: 952 LENLLESFQKSF 963
+ L F+ +
Sbjct: 1191 IGRLKCEFEARY 1202
>B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686)
GN=LACBIDRAFT_248757 PE=3 SV=1
Length = 960
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 305/889 (34%), Positives = 465/889 (52%), Gaps = 106/889 (11%)
Query: 137 RQVKMETEAWE---EAAKEYQELLEDI---CEQKLVPNLPYMKSLFLGWFEPLKSAIVAE 190
RQ +ET +E E KE E LE + E +L + ++S W + LKS + +E
Sbjct: 1 RQKHLETSVYEIARERMKEEHEYLESLGINAENRLKDST--LQSWMWQWHQNLKSRLESE 58
Query: 191 QEVCKKSHRKMTH---------APYFNDLPADKMAVITMHKLMGLLMTNHNGIGCARVIH 241
++ KM + +PY + AD+++ IT+ +LM L + G +
Sbjct: 59 IKLIAAFEAKMLNRHDQTTQLLSPYLALVKADRLSYITILELMRLQGSGGVNHGM-KTTR 117
Query: 242 AALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXXXX 301
A + IG+A+E E Y A + + +D
Sbjct: 118 ALIAIGKAVEME----------------------------YKAQM--CRTNDIAIPTMTG 147
Query: 302 XXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYI--Q 359
S +++++M + G PW Q R+K+G +++ L++ AY+ Q
Sbjct: 148 HSTNFFSVLGYSNLQKRRMAAARHMQDGEAWTTPWSQAVRSKIGGILVECLMDVAYVRRQ 207
Query: 360 SPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKS-AKNMVIP- 417
G S + +PAF H ++ + GI++ +P V + L + + P
Sbjct: 208 RDDQVTGKSVTEDQPAFYHAYEYVRGT------KLGILKLNPAVAERLSTDRLRETIHPR 261
Query: 418 YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFEALDSLGN 476
+LPMLVPP W +G YL+ + VMR + +Q +++A + ++E + LD LG+
Sbjct: 262 HLPMLVPPKPWMHIRQGGYLYNKTSVMRFKESIEQETYLQKAIDDGKMELVLAGLDVLGS 321
Query: 477 TKWRINQRLLDVISQIWTSGGRLADL----VDRDDVXXXXXXXXXXXXXIRKWKRQVKTI 532
T WRIN+ + +V+ ++W SG R+ + D+ +RQ K+
Sbjct: 322 TPWRINKNVYEVVLKVWNSGERMGKIPPAVYDQPAPEIPENYEKDLQARSVHLQRQ-KSY 380
Query: 533 MKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 592
+ HS+RC + K+ +AR ++ Y PHN+DFRGRAYP+ P+L+H+G DLCRG+
Sbjct: 381 TQGKANNHSERCNVNYKIEIARAFLHDE-LYMPHNLDFRGRAYPIPPHLSHIGDDLCRGL 439
Query: 593 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRR 652
L FA+ +PLG+ GL WLKIHLANLY G DK ++ R + LDD+ DSA PL+G+R
Sbjct: 440 LLFADAKPLGERGLWWLKIHLANLY--GYDKASFQERADWVMERLDDIADSATNPLDGKR 497
Query: 653 WWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAA 712
WW + +DP Q LAAC+ L AL+S P +S +PVH DG+CNGLQHYAALG D +GA
Sbjct: 498 WWTKGDDPWQVLAACMELHAALQSEDPLAYMSTLPVHQDGTCNGLQHYAALGGDAVGAKQ 557
Query: 713 VNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTS 772
VNL GDRP+DVYS + V + + DA E ++ RK+VKQTVMT+
Sbjct: 558 VNLAAGDRPSDVYSYVGRLVDQQIEADAANGLEM------AKLLQGKITRKVVKQTVMTT 611
Query: 773 VYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLAD 832
VYGVT+VGAR+QI+++LK+R I D+ ++A+ Y AK LT + + F A+ I +WL
Sbjct: 612 VYGVTFVGAREQIEKQLKDRHDIPDEL-CWTAASYLAKKVLTCIGDTFTGAKHIQNWLNL 670
Query: 833 CAKVIASTNEPVR------------------------------WTTPIGLPAVQPYRQIG 862
CA++I+ + P R WTTP+ LP +QPYR+
Sbjct: 671 CARLISKSIAPDRFIDAIAAPKKRGRPAVAMSRFKKEQMTSVVWTTPLQLPIIQPYRKHA 730
Query: 863 RSIIKTSLQVLSLRRETDKVLVK--RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
R + T++Q + + + V +Q++AFPPNF+HSLD +HMM+TA+ C GL FA
Sbjct: 731 RKQVMTAVQSVFISDPSSPAEVNSLKQASAFPPNFIHSLDATHMMLTALECHSRGLTFAS 790
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFP 969
VHDSYWTHA +D M ++R+ F+ L+ + +L L E F++ F P
Sbjct: 791 VHDSYWTHASTIDSMAEVIRDTFILLHSSDVLGKLHEEFKERFKGFKLP 839
>J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_0976 PE=3
SV=1
Length = 1351
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 304/876 (34%), Positives = 444/876 (50%), Gaps = 110/876 (12%)
Query: 137 RQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCKK 196
RQ +E A E A + ++ E+ + + + + W+ + + E + CK
Sbjct: 415 RQKVLENRATEAARERWKHDFEEAKARGDISIEKNLNAKLWRWYNDMLPLVKEEIKHCKS 474
Query: 197 SH---------------RKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNG--IGCARV 239
S ++ + PY + KM VIT+ +L+ L N G I R
Sbjct: 475 SLSEKPTDKKGLTKVEINRLGYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRT 531
Query: 240 IHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXXXXXX 299
A + +G+AIE E R E + ++N K
Sbjct: 532 ARAVISVGKAIEMEFRSEQVLKSESQTFRDVNKKSPE-----FKKLVQNAK--------- 577
Query: 300 XXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQ 359
SS I+Q K+ W Q RA++G ++ +LI A +
Sbjct: 578 --------SVFRSSQIEQSKIL--------------WPQNIRAQIGSVLISMLIHVAKVS 615
Query: 360 SPVSQLGGSPPDIR-------PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL--EKS 410
+ G P + PAF H ++ + G+++ + L E+
Sbjct: 616 -----VQGVDPITKAKVHGEAPAFAHGYQYHNGS------KLGVLKIHKTLIHQLNGERL 664
Query: 411 AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYN-QLEPIFE 469
++ LPMLV P +W + G Y + S ++RT + +Q +K A N ++ +++
Sbjct: 665 IASVQPQLLPMLVEPKSWINWRSGGYHYTQSTLLRTKDSPEQVAYLKAASENGDIDRVYD 724
Query: 470 ALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDD--VXXXXXXXXXXXXXIRKWKR 527
L+ LGNT W +N+++ DV+SQ+W D+ D V +R WK
Sbjct: 725 GLNVLGNTPWTVNRKVFDVVSQVWNKREGFLDIPGAQDEMVLPPAPPRNSDPSILRTWKL 784
Query: 528 QVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSD 587
+VKTI + + S RC+ KL +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+D
Sbjct: 785 EVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGND 843
Query: 588 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRP 647
+ RG+L F G+ LG SGL+WLKIHL+NL+ G DKL E RV+FTE+HL+D+ DSA+ P
Sbjct: 844 MSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLRLEDRVSFTESHLEDIKDSAENP 901
Query: 648 LEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDK 707
L G+ WW A+ P Q LA C L+E ++ PE ISH P+H DG+CNGLQHYAALG D
Sbjct: 902 LTGQGWWKTADKPWQALATCFELNEVMKMDNPEDFISHQPIHQDGTCNGLQHYAALGGDV 961
Query: 708 LGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQ 767
GA VNLV D+P DVY+ +A V + + AEK E ++ RK+VKQ
Sbjct: 962 EGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN------AKILQDKITRKVVKQ 1015
Query: 768 TVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIM 827
TVMT+VYGVTYVGA QI ++L +D E S Y K A+ E+F +A I
Sbjct: 1016 TVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFSKYLTKHVFGAIRELFHSAHLIQ 1073
Query: 828 SWLADCAKVIAST-------------NEP-----VRWTTPIGLPAVQPYRQIGRSIIKTS 869
WL + AK I+ + N+P V WTTP+GLP VQPYR+ + ++T+
Sbjct: 1074 DWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYREESKKQVETN 1133
Query: 870 LQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWT 927
LQ + + + V +RQ PPNF+HSLD SHM+++A C + GLDFA VHDSYWT
Sbjct: 1134 LQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGEKGLDFASVHDSYWT 1193
Query: 928 HACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
HA DVD M+ +LRE+F++L+E ++ L E F + +
Sbjct: 1194 HASDVDTMSVVLREQFIKLHEVDLVLRLKEEFGQRY 1229
>F4S3X3_MELLP (tr|F4S3X3) DNA-directed RNA polymerase OS=Melampsora
larici-populina (strain 98AG31 / pathotype 3-4-7)
GN=MELLADRAFT_50335 PE=3 SV=1
Length = 854
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 298/745 (40%), Positives = 404/745 (54%), Gaps = 109/745 (14%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI-QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY 394
W RAKVG +M+ L++TA I +S V G + +PAF T + D +R
Sbjct: 127 WTINQRAKVGAMLMKGLLQTAKITRSQVMPDGSIYKEEQPAFYQTTQYF------DGKRV 180
Query: 395 GIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQ 452
G+ + + V + L++ N+ + YLPM+ PP WT GAYL + MRT + +Q
Sbjct: 181 GVTKLNEAVAERLDRDPANVTLHPRYLPMISPPLPWTSPKNGAYLVHAAPFMRTKDSPEQ 240
Query: 453 CEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD----- 506
V A N L+ IF+ALD LG T W IN+ + DV++ +W SG LA + RD
Sbjct: 241 HLHVMEAHRLNGLDDIFQALDKLGQTAWAINRPVFDVMAVVWNSGKELAGIPVRDPHLNL 300
Query: 507 DVXXXXXXX---------XXXXXXIRKWKRQV-KTIMKENNERHSQRCEIELKLAVARKM 556
DV + ++++ ++++ + QRC + +L +AR
Sbjct: 301 DVSDLQSELLKNDPLEDGSQESPRMEGERKEIYRSLLATRRSAYGQRCSVNYQLEIARAY 360
Query: 557 KEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 616
E FY+PHNVDFRGRAYP+ LNH+G D+ RG+L FAE + LG+ GL WLK+HLAN
Sbjct: 361 LNET-FYFPHNVDFRGRAYPLPANLNHIGDDISRGLLTFAERKELGERGLFWLKVHLAN- 418
Query: 617 YAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRS 676
G DK + R+AFTE HL D+ DSAD PL+G WWL++EDP Q LAACI L+EALRS
Sbjct: 419 -KAGYDKASLDERLAFTEGHLKDINDSADHPLDGPGWWLKSEDPWQTLAACIELTEALRS 477
Query: 677 PTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIM 736
P S +PVH DGSCNGLQHYAALG D G VNL+ G RP DVYS +A+ V +++
Sbjct: 478 DDPTKYKSRLPVHQDGSCNGLQHYAALGGDVEGGREVNLIPGIRPGDVYSKVATEVNKLV 537
Query: 737 RKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIE 796
+DAE + + RK+VKQTVMT+VYGVT+VGAR+QI+R+LK+ I
Sbjct: 538 NQDAENGHDI------AKALKGHIKRKVVKQTVMTTVYGVTFVGAREQIRRQLKDLGVIP 591
Query: 797 DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR----------- 845
+ L+ ++ Y A L ++ E+F A +I WL A+++A + P R
Sbjct: 592 VPN-LYISAAYVATLVLRSIGEVFRGAVAIQRWLTYVARLVAKSIPPERASLLMTKVDVP 650
Query: 846 ----------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDK 881
WTTP+GL QPYR R+ I T LQ + + E +
Sbjct: 651 GQSISANAQKAQDETELMTSMTWTTPLGLVVCQPYRAQNRTQISTVLQTVYIADPFEPAQ 710
Query: 882 VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILRE 941
+ Q++AFPPNF+HSLD +HMM+TA+ACK + FA VHDSYWTHA DVD MN LRE
Sbjct: 711 ADSRGQASAFPPNFIHSLDATHMMLTALACKD--ITFASVHDSYWTHAADVDVMNVKLRE 768
Query: 942 KFVELYEAPILENLLE-----------------------------------SFQKSFPKL 966
FV L+ A ILENL + S +K + L
Sbjct: 769 AFVRLHTAKILENLAQETLHRYSGYKIPRSSLSAKMLSDLKYMGVEVDKIMSQEKRYVDL 828
Query: 967 N--FPPLPERGDFDLREVLNSQYFF 989
PPLP +GD ++ VL SQYFF
Sbjct: 829 ASLIPPLPPKGDLEIAAVLKSQYFF 853
>H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0C03560 PE=3 SV=1
Length = 1284
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 309/898 (34%), Positives = 473/898 (52%), Gaps = 116/898 (12%)
Query: 121 PLLDRKAKYKDTML---RKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSL-- 175
P + +AK++ + ++RQ +E A + A + ++ D E K +L +SL
Sbjct: 328 PTEEEQAKFESILNEFNQERQHALELRASDAAKERWKH---DFEEAKARGDLSIKRSLNA 384
Query: 176 -FLGWFEPLKSAIVAEQEVC---------------KKSHRKMTHAPYFNDLPADKMAVIT 219
W+ + + E +C K +++ +APY + +KM VI
Sbjct: 385 KLWKWYNAMLPLLKKEINLCRAVSEKSAANKERLPKADSKRLEYAPYLALVNPEKMCVIA 444
Query: 220 MHKLMGLLMTNHNG--IGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEP 277
+ +++ L N G I R A + +G+AIE E R + P
Sbjct: 445 ILEILKL---NSTGGIIEGMRTARALISVGKAIEMEFR--SEQLLKNESYIFKDVNKKSP 499
Query: 278 DGEFYHAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWG 337
+ + Y + K S SS I+Q K+ W
Sbjct: 500 EFKTY---LRKAKKS-----------------FRSSKIEQAKI--------------VWP 525
Query: 338 QEARAKVGCRVMQLLIETAYIQ----SPVS--QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
Q RAKVG ++ +LI A ++ P++ ++ G+ P AF H+++
Sbjct: 526 QSIRAKVGSILVSILIHVAKVEIEGIDPITHQKIFGTAP----AFSHSYQYHNGS----- 576
Query: 392 RRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGA 449
+ G+I + + L E+ ++ LPMLV P W + G Y + S ++R+ +
Sbjct: 577 -KLGVIRIHKSLVQQLDGERLMASVQPQLLPMLVEPRPWVNWKSGGYYYTQSTLVRSKDS 635
Query: 450 KQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VDRD 506
+Q ++ A Q L+ +++ L+ LG+T W +N+R+ ++IS++W GG ++ + ++
Sbjct: 636 PEQIAYLEAASNVQALDKVYDGLNVLGDTAWTVNRRIFEIISKVWNKGGSFLEIPGIQQE 695
Query: 507 DVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
I +WK + K + + + S RC++ KL +AR E+ FY+PH
Sbjct: 696 SEFLPPPPKNADPSVINEWKNKNKILANKYSSNRSMRCDLNYKLEIARAFLGER-FYFPH 754
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
N+DFRGRAYP+ P+ NHLG+D+ RG+L F +G+ LGK GL WLK+HL+NLY GVDK+
Sbjct: 755 NLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKRLGKEGLSWLKVHLSNLY--GVDKVPL 812
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRR-WWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
R F ++HL+++ DSA+ PL G+ WW +A+ P Q LA CI L+EAL+ PE ISH
Sbjct: 813 LERENFIDDHLEEIKDSAENPLNGKYLWWQKADKPWQALATCIELNEALKLENPEDFISH 872
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
PVH DG+CNGLQHYAALG D GA VNLV G++P DVY+ +A V +R+ +KDP
Sbjct: 873 QPVHQDGTCNGLQHYAALGGDIEGAQQVNLVPGEKPNDVYAHVAKIVQGKLRETLQKDPN 932
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
+++RK+VKQTVMT VYGVT +GA QI ++L + +D S+ S
Sbjct: 933 D----EMAKFLVDKLNRKVVKQTVMTHVYGVTLLGATLQIDKQLND--LFDDSSDSMKYS 986
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NEP-----VRWT 847
Y A+ A+ E FE A I WL C+K ++ + N+P V WT
Sbjct: 987 KYLARHVFAAIRESFEGAHLIQDWLGVCSKKLSKSIRLDVDEKSFKNGNKPEFMTSVIWT 1046
Query: 848 TPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMM 905
TP+GLP VQPYRQ+ + I+T+LQ + + ++V +RQ FPPNF+HSLD SHM+
Sbjct: 1047 TPLGLPIVQPYRQLSKKQIETNLQSVFISDPFAVNQVNARRQKAGFPPNFIHSLDASHML 1106
Query: 906 MTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
++A C K GL FA VHDSYWTHACDV +MN+ LRE+FV+L+E ++E L E F + +
Sbjct: 1107 LSASECHKDGLVFASVHDSYWTHACDVSKMNKHLREQFVKLHEVDLIERLKEEFDERY 1164
>D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus norvegicus
GN=Polrmt PE=3 SV=2
Length = 1203
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/686 (39%), Positives = 389/686 (56%), Gaps = 45/686 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ +LL++ + ++ G+ + P H + S + R+
Sbjct: 534 QPWSVPVLLQLGKQLAELLVQAVQMPRSLAARHGAQ-NFIPVLYHVY------SFRSYRQ 586
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGA 449
GI++ P T LE +A+ + +PML PP WT GAYL + +MR T G
Sbjct: 587 VGILKPHPAFTHLLETAAEPTLTFETTEVPMLCPPLPWTSLHSGAYLLSSTKIMRATEGT 646
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RLADLVDRDD 507
Q ++R P QL +AL LGN WR+N RLLD++ QI+ G RL R +
Sbjct: 647 TQHQRLLERCPPAQLHGALDALTQLGNCAWRVNGRLLDLVLQIFRDKGCMRLGVPPPRSE 706
Query: 508 VXXXXXXXX---XXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ ++++ +K E HS R E +L++A+ +++ + F+
Sbjct: 707 APRPAKHQLPPGSTPVHKSELRKELARCLKAAREMHSLRSEALYRLSLAQHLRD-RVFWL 765
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFAEGRPLG GL WLKIHL NL G +
Sbjct: 766 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPRGLDWLKIHLINL-TGLRKRD 824
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
R+AF + + ++ DSAD PL G++WW++A++P Q LA C+ +++A+RSP P +S
Sbjct: 825 SLRMRLAFADEVMGEILDSADNPLTGQKWWMKADEPWQTLACCMEVAQAVRSPDPTAYVS 884
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DGSCNGLQHYAALGRD +GAA+VNL D P DVY +A++V E+ ++DA++
Sbjct: 885 HLPVHQDGSCNGLQHYAALGRDSVGAASVNLTPSDLPQDVYREVATQVEELRQQDAKEGL 944
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ V RK+VKQTVMT VYGVT G R QI++RL+E + ++ A
Sbjct: 945 QVAQALEGF------VSRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VWEA 997
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF + R+I WL + A +I+ PV W TP+G+P +QPY + +
Sbjct: 998 SHYLVRQVFKSLQEMFSSTRAIQRWLTESANLISHAGWPVEWVTPLGIPIIQPYHRESKI 1057
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+K LQ ++ D K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1058 QVKGGLQSITFTSSVDDSQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV 1117
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN-------------- 967
HD +WTHA D+ MN + RE+FV L+ PILE+L + +K F ++
Sbjct: 1118 HDCFWTHAADIPMMNEVCREQFVRLHSEPILEDLAKFLEKRFCSVSKSLKPSELALITKL 1177
Query: 968 ---FPPLPERGDFDLREVLNSQYFFN 990
LPE G FDL +V+ S YFF+
Sbjct: 1178 QETLRSLPETGTFDLGQVIRSTYFFS 1203
>M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna polymerase
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_4440
PE=4 SV=1
Length = 1399
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/668 (39%), Positives = 378/668 (56%), Gaps = 65/668 (9%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVS----QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W +AKVG +++ L++ A + PV+ + + ++PAF H + M
Sbjct: 549 WSVGIKAKVGSFLLESLLKVAKV--PVTMVHPETNETVTQMQPAFSHAQQYRMG------ 600
Query: 392 RRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHG-- 448
R+ G+I + ++ + L++ +++ +LPMLV P WT + G +L P VMR
Sbjct: 601 RKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLKHPGRVMRVKNGD 660
Query: 449 AKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV 508
A Q+ A L +F+ L+ LG WRINQ + D++ + W SG +A+L
Sbjct: 661 ADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIMLEAWNSGDAIANLAPDKPK 720
Query: 509 XXXXXXXXXXXXXI--RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
+ R+W VK + + HSQRC +L +AR +++ K FY+PH
Sbjct: 721 LDYPPEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNFQLEIARALRD-KTFYFPH 779
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
NVDFRGRAYP+ PYLNH+G+D CRG++ F G+ LG SGLRWLK+HLAN+Y G DK
Sbjct: 780 NVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWLKVHLANVY--GFDKASL 837
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHV 686
+ R F ++D+++DSA PL G+RWWL+AEDP QCLAAC+ AL S P + +S++
Sbjct: 838 QEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACMEFKNALESGDPASFVSYL 897
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+ +A V E + KD
Sbjct: 898 PVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVADLVKESIAKDLL----- 952
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL-KERCAIEDDSEL--FS 803
+ ++ RK+VKQTVMT+VYGVT++GA+ Q++++L + D+ E+ +
Sbjct: 953 -AGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHKDLPDNDEINPGT 1011
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP-------------------- 843
+ Y TAL MF+ A I WL DCA I+++ P
Sbjct: 1012 LASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQIERIVAQASEQEGRPSKR 1071
Query: 844 --------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQ 887
V WTTP+ LP VQPYR +++T+LQ+LSL +D V ++Q
Sbjct: 1072 AALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLVRTNLQLLSLSEPHRSDPVSSRKQ 1131
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
AFPPNF+HSLD +HM+++AV C +A L FA VHDS+WTHA D+D MN LR+ F+E++
Sbjct: 1132 LQAFPPNFIHSLDATHMLLSAVKCNEAKLAFAAVHDSFWTHAADIDTMNTFLRDAFIEIH 1191
Query: 948 EAPILENL 955
++ L
Sbjct: 1192 SDDVIGRL 1199
>G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryotinia fuckeliana
(strain T4) GN=BofuT4P0000045001 PE=3 SV=1
Length = 1399
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/668 (39%), Positives = 378/668 (56%), Gaps = 65/668 (9%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVS----QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W +AKVG +++ L++ A + PV+ + + ++PAF H + M
Sbjct: 549 WSVGIKAKVGSFLLESLLKVAKV--PVTMVHPETNETVTQMQPAFSHAQQYRMG------ 600
Query: 392 RRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHG-- 448
R+ G+I + ++ + L++ +++ +LPMLV P WT + G +L P VMR
Sbjct: 601 RKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLKHPGRVMRVKNGD 660
Query: 449 AKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV 508
A Q+ A L +F+ L+ LG WRINQ + D++ + W SG +A+L
Sbjct: 661 ADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIMLEAWNSGDAIANLAPDKPK 720
Query: 509 XXXXXXXXXXXXXI--RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
+ R+W VK + + HSQRC +L +AR +++ K FY+PH
Sbjct: 721 LDYPPEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNFQLEIARALRD-KTFYFPH 779
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
NVDFRGRAYP+ PYLNH+G+D CRG++ F G+ LG SGLRWLK+HLAN+Y G DK
Sbjct: 780 NVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWLKVHLANVY--GFDKASL 837
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHV 686
+ R F ++D+++DSA PL G+RWWL+AEDP QCLAAC+ AL S P + +S++
Sbjct: 838 QEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACMEFKNALESGDPASFVSYL 897
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+ +A V E + KD
Sbjct: 898 PVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVADLVKESIAKDLL----- 952
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL-KERCAIEDDSEL--FS 803
+ ++ RK+VKQTVMT+VYGVT++GA+ Q++++L + D+ E+ +
Sbjct: 953 -AGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHKDLPDNDEINPGT 1011
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP-------------------- 843
+ Y TAL MF+ A I WL DCA I+++ P
Sbjct: 1012 LASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQIERIVAQASEQEGRPSKR 1071
Query: 844 --------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQ 887
V WTTP+ LP VQPYR +++T+LQ+LSL +D V ++Q
Sbjct: 1072 AALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLVRTNLQLLSLSEPHRSDPVSSRKQ 1131
Query: 888 STAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELY 947
AFPPNF+HSLD +HM+++AV C +A L FA VHDS+WTHA D+D MN LR+ F+E++
Sbjct: 1132 LQAFPPNFIHSLDATHMLLSAVKCNEAKLAFAAVHDSFWTHAADIDTMNTFLRDAFIEIH 1191
Query: 948 EAPILENL 955
++ L
Sbjct: 1192 SDDVIGRL 1199
>M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieria sulphuraria
GN=Gasu_13440 PE=3 SV=1
Length = 1125
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 280/677 (41%), Positives = 394/677 (58%), Gaps = 45/677 (6%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSP-VSQLGGSPPDIRPAFKHTFKTAMADSQKDIRRY 394
W + +VG ++ +L++ A Q V S AF H KT + K
Sbjct: 472 WDKLTTLRVGSYLVDMLLKNAPTQQVLVRTKASSDSQFVSAFWH--KTVRGNGNK---LQ 526
Query: 395 GIIECDPLVTKGLEKSAKNMVIPYL-------PMLVPPNNWTRYDKGAYLFLPSYVMRT- 446
G++ C +V L + N P+L PM+V P WT G YL + S +MR
Sbjct: 527 GLVGCRDIVYDILSRDLSN---PFLNPLPRLRPMVVVPKPWTGPKTGGYLRIRSDLMRCE 583
Query: 447 HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD 506
H + Q A++ A L ++E L++LG T W++N ++L+V ++W GG +A LV+R+
Sbjct: 584 HSHRSQWNALRTA---NLSKVYEGLNALGATPWKVNTKILEVAEELWRRGGGIAGLVNRE 640
Query: 507 DVXXXXXXXXXXXXXIRKWKRQVKTIMKENN----ERHSQRCEIELKLAVARKMKEEKGF 562
+ R Q++ ++E ERH+ C+ E+ L AR+ + F
Sbjct: 641 RIDVPKINFNDFRLLPRNEMTQIRGEIREAKKAVAERHALTCQTEIILQEAREFAKYDVF 700
Query: 563 YYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAE-GRPLGKSGLRWLKIHLANLYAGGV 621
Y PHN+DFRGRAYP+ L+H+ SDL RG+L FA G+PLG+ G+ WLK+H+ANL G
Sbjct: 701 YLPHNMDFRGRAYPIPSTLHHMSSDLHRGLLMFASPGKPLGERGVYWLKVHIANL--AGQ 758
Query: 622 DKLCYESRVAFTENHLDDVFDSADRPLE--GRRWWLEAEDPLQCLAACINLSEALRSPTP 679
DK +E RV +TENH ++ A PL+ WW EDP Q LAAC+ + A +
Sbjct: 759 DKATFEDRVRWTENHSLEIIQVAQDPLDPNNLEWWSTREDPFQFLAACVEFANA---ASQ 815
Query: 680 ETTISH----VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
++SH VP+ MDGSCNGLQHYAAL RD GA VNL+ D+P DVYS + RV +
Sbjct: 816 GNSMSHYCSSVPIQMDGSCNGLQHYAALARDCEGAFKVNLLPCDKPQDVYSAVCDRVRVM 875
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+ KDAE+ E + RK+VKQTVMTSVYGVT +GAR QI+ RL+E I
Sbjct: 876 VEKDAERGLEEAKLALKC------LSRKVVKQTVMTSVYGVTLIGARLQIENRLREAKLI 929
Query: 796 EDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAV 855
E + +F S Y A TL ++ +FE A M WL++CA+ IA T + V W TP+GLP
Sbjct: 930 EKEW-IFKVSSYLASRTLESIGNLFEVADRTMEWLSECAQKIAHTKQAVSWITPLGLPIY 988
Query: 856 QPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
QPYR R +KT++Q++S++ E+ + ++Q TAFPPN++HSLD SHM+MTA AC K
Sbjct: 989 QPYRSKVRLDVKTAMQIVSMQLYDESLPIEKRKQMTAFPPNYIHSLDSSHMLMTASACVK 1048
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPE 973
G+ FA VHDS+WT A DVD MNRILRE FV L+ +L L E F+ +P+++F P PE
Sbjct: 1049 EGMYFAAVHDSFWTSAADVDRMNRILRETFVGLHSNNLLWQLYEYFRSRYPQVDFRPPPE 1108
Query: 974 RGDFDLREVLNSQYFFN 990
RG D++ VL++ +FF+
Sbjct: 1109 RGTLDIQSVLDAPFFFD 1125
>G3XYH4_ASPNA (tr|G3XYH4) DNA-directed RNA polymerase OS=Aspergillus niger (strain
ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC
3858a / NRRL 328 / USDA 3528.7) GN=ASPNIDRAFT_48810 PE=3
SV=1
Length = 1367
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/684 (40%), Positives = 372/684 (54%), Gaps = 56/684 (8%)
Query: 326 IIKGLDDWKP---WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI--RPAFKHTF 380
I++ L+ P W +AKVG +M L E A + P+I +PAF+H +
Sbjct: 520 IVRNLEQDDPAVAWSARVKAKVGAALMSFLFEVAKAPVKIDNPETKKPEISMQPAFQHAY 579
Query: 381 KTAMADSQKDIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFL 439
+ RR G I P + K + K +++ +LPML P W G Y
Sbjct: 580 QINWG------RRAGFIHLHPEIVKIVTKEPTSDLLGRHLPMLSKPRPWKGVSDGGYHVY 633
Query: 440 PSYVMRTH-GAKQQCEAVKRA-PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG 497
S ++RT G Q VK A N LE I + LD LGNT W IN+ + V+ + W SG
Sbjct: 634 KSNLIRTTPGETLQPAYVKAALENNGLEQIRQGLDILGNTGWVINEDVFKVMLEAWNSGE 693
Query: 498 RLADLVDRDDVXXXXXXXXXXX--XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARK 555
+ADL + +KW ++ I HSQRC ++ VAR
Sbjct: 694 PVADLAPLEPELPHPPKPSPEEGYEAEKKWDNDMREIENRRAGFHSQRCFQNFQMEVARA 753
Query: 556 MKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 615
+ E FY PHN+DFRGRAYP+ PYLN +G+D RG+L F++ +PLG+SGLRWLK+ +AN
Sbjct: 754 YRNET-FYLPHNLDFRGRAYPLPPYLNQMGADNARGLLLFSQAKPLGESGLRWLKVQIAN 812
Query: 616 LYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR 675
L G DK R FT +HLDDV DSA+ L GRRWWL+A+DP QCLAAC L AL+
Sbjct: 813 L--SGFDKASLSEREKFTMDHLDDVLDSANNGLHGRRWWLKADDPWQCLAACCELRNALQ 870
Query: 676 SPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
P P S +PVH DGSCNGLQHYAALG DK+GA VNL DRP+DVY+G+A V E
Sbjct: 871 HPDPTQFASRLPVHQDGSCNGLQHYAALGGDKIGAQQVNLEPSDRPSDVYTGVAEFVKEA 930
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+ ++A + ++ RK+VKQTVMT+VYGVT++GA Q++++L +
Sbjct: 931 VAREAAQG------HSVAKYLDGKITRKVVKQTVMTNVYGVTFMGAMKQVRKQLIDHYPE 984
Query: 796 EDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------------ 843
+ + Y A+ AL MF A I WL DCA I + P
Sbjct: 985 LTQDQKHQGAIYIARKVFEALGTMFNGAHDIQYWLGDCASRITQSLAPEQIEQIAKEAMN 1044
Query: 844 -----------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSL--RRETDKVLV 884
V WTTP+GLP VQPYR I T+LQ LS+ D V
Sbjct: 1045 PEDAKQMEDPTKKFRSTVIWTTPLGLPVVQPYRVRKARRIYTTLQDLSIVDGSSGDVVSK 1104
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
++Q AFPPNF+HSLD +HMM++A+AC +AGL F+ VHDS+WTHACD+D MN++LRE FV
Sbjct: 1105 RKQLQAFPPNFIHSLDATHMMLSAIACHRAGLQFSAVHDSFWTHACDIDSMNQLLREAFV 1164
Query: 945 ELYEAPILENLLESFQKSFPKLNF 968
++ +++ L F+ + K F
Sbjct: 1165 RMHSDDVVKRLAAEFEVRYSKNLF 1188
>A2R5W5_ASPNC (tr|A2R5W5) DNA-directed RNA polymerase OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=An15g05790 PE=3 SV=1
Length = 1367
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/684 (40%), Positives = 372/684 (54%), Gaps = 56/684 (8%)
Query: 326 IIKGLDDWKP---WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI--RPAFKHTF 380
I++ L+ P W +AKVG +M L E A + P+I +PAF+H +
Sbjct: 520 IVRNLEQDDPAVAWSARVKAKVGAALMSFLFEVAKAPVKIDNPETKKPEISMQPAFQHAY 579
Query: 381 KTAMADSQKDIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFL 439
+ RR G I P + K + K +++ +LPML P W G Y
Sbjct: 580 QINWG------RRAGFIHLHPEIVKIVTKEPTSDLLGRHLPMLSKPRPWKGVSDGGYHVY 633
Query: 440 PSYVMRTH-GAKQQCEAVKRA-PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG 497
S ++RT G Q VK A N LE I + LD LGNT W IN+ + V+ + W SG
Sbjct: 634 KSNLIRTTPGETLQPAYVKAALENNGLEQIRQGLDILGNTGWVINEDVFKVMLEAWNSGE 693
Query: 498 RLADLVDRDDVXXXXXXXXXXX--XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARK 555
+ADL + +KW ++ I HSQRC ++ VAR
Sbjct: 694 PVADLAPLEPELPHPPKPSPEEGYEAEKKWDNDMREIENRRAGFHSQRCFQNFQMEVARA 753
Query: 556 MKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 615
+ E FY PHN+DFRGRAYP+ PYLN +G+D RG+L F++ +PLG+SGLRWLK+ +AN
Sbjct: 754 YRNET-FYLPHNLDFRGRAYPLPPYLNQMGADNARGLLLFSQAKPLGESGLRWLKVQIAN 812
Query: 616 LYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR 675
L G DK R FT +HLDDV DSA+ L GRRWWL+A+DP QCLAAC L AL+
Sbjct: 813 L--SGFDKASLSEREKFTMDHLDDVLDSANNGLHGRRWWLKADDPWQCLAACCELRNALQ 870
Query: 676 SPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
P P S +PVH DGSCNGLQHYAALG DK+GA VNL DRP+DVY+G+A V E
Sbjct: 871 HPDPTQFASRLPVHQDGSCNGLQHYAALGGDKIGAQQVNLEPSDRPSDVYTGVAEFVKEA 930
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+ ++A + ++ RK+VKQTVMT+VYGVT++GA Q++++L +
Sbjct: 931 VAREAAQG------HSVAKYLDGKITRKVVKQTVMTNVYGVTFMGAMKQVRKQLIDHYPE 984
Query: 796 EDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------------ 843
+ + Y A+ AL MF A I WL DCA I + P
Sbjct: 985 LTQDQKHQGAIYIARKVFEALGTMFNGAHDIQYWLGDCASRITQSLAPEQIEQIAKEAMN 1044
Query: 844 -----------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSL--RRETDKVLV 884
V WTTP+GLP VQPYR I T+LQ LS+ D V
Sbjct: 1045 PEDAKQMEDPTKKFRSTVIWTTPLGLPVVQPYRVRKARRIYTTLQDLSIVDGSSGDVVSK 1104
Query: 885 KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFV 944
++Q AFPPNF+HSLD +HMM++A+AC +AGL F+ VHDS+WTHACD+D MN++LRE FV
Sbjct: 1105 RKQLQAFPPNFIHSLDATHMMLSAIACHRAGLQFSAVHDSFWTHACDIDSMNQLLREAFV 1164
Query: 945 ELYEAPILENLLESFQKSFPKLNF 968
++ +++ L F+ + K F
Sbjct: 1165 RMHSDDVVKRLAAEFEVRYSKNLF 1188
>G7XU63_ASPKW (tr|G7XU63) DNA-directed RNA polymerase OS=Aspergillus kawachii
(strain NBRC 4308) GN=AKAW_08586 PE=3 SV=1
Length = 1367
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 281/689 (40%), Positives = 375/689 (54%), Gaps = 66/689 (9%)
Query: 326 IIKGLDDWKP---WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDI--RPAFKHTF 380
I++ L+ P W +AKVG +M L E A + P+I +PAF+H +
Sbjct: 520 IVRNLEQDDPAVAWSARVKAKVGAALMSFLFEVAKAPVKIDNPETKKPEISMQPAFQHAY 579
Query: 381 KTAMADSQKDIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFL 439
+ RR G I P + K + K +++ +LPML P W G Y
Sbjct: 580 QINWG------RRAGFIHLHPEIVKIVTKEPTSDLLGRHLPMLSKPRPWKGVSDGGYHVY 633
Query: 440 PSYVMRTH-GAKQQCEAVKRA-PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG 497
S ++RT G Q VK A N LE I + LD LGNT W IN+ + V+ + W SG
Sbjct: 634 KSNLIRTTPGETLQPAYVKAALENNGLEQIRQGLDILGNTGWVINEDVFKVMLEAWNSGE 693
Query: 498 RLADLVDRDDVXXXXXXXXXXX--XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARK 555
+ADL + +KW ++ I HSQRC ++ VAR
Sbjct: 694 PVADLAPLEPELPHPPKPSPEEGYEAEKKWDNDMREIENRRAGFHSQRCFQNFQMEVARA 753
Query: 556 MKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 615
+ E FY PHN+DFRGRAYP+ PYLN +G+D RG+L F++ +PLG+SGLRWLK+ +AN
Sbjct: 754 YRNET-FYLPHNLDFRGRAYPLPPYLNQMGADNARGLLLFSQAKPLGESGLRWLKVQIAN 812
Query: 616 LYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALR 675
L G DK R FT +HLDDV DSA+ L GRRWWL+A+DP QCLAAC L AL+
Sbjct: 813 L--SGFDKASLSEREKFTMDHLDDVLDSANNGLHGRRWWLKADDPWQCLAACCELRNALQ 870
Query: 676 SPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEI 735
P P S +PVH DGSCNGLQHYAALG DK+GA VNL DRP+DVY+G+A V E
Sbjct: 871 HPDPTQFASRLPVHQDGSCNGLQHYAALGGDKIGAQQVNLEPSDRPSDVYTGVAEFVKEA 930
Query: 736 MRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAI 795
+ ++A + ++ RK+VKQTVMT+VYGVT++GA Q++++L I
Sbjct: 931 VAREAAQG------HSVAKYLDGKITRKVVKQTVMTNVYGVTFMGAMKQVRKQL-----I 979
Query: 796 EDDSELFS-----ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------- 843
+ ELF + Y A+ AL MF A I WL DCA I + P
Sbjct: 980 DHYPELFQDQKHQGAIYIARKVFEALGTMFNGAHDIQYWLGDCASRITQSLSPEQIEQIA 1039
Query: 844 ----------------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSL--RRET 879
V WTTP+GLP VQPYR I T+LQ LS+
Sbjct: 1040 KEAMNPEEAKQMEDPTKKFRSTVIWTTPLGLPVVQPYRVRKARRIYTTLQDLSIVDGSSG 1099
Query: 880 DKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRIL 939
D V ++Q AFPPNF+HSLD +HMM++A+AC +AGL F+ VHDS+WTHACD+D MN++L
Sbjct: 1100 DVVSKRKQLQAFPPNFIHSLDATHMMLSAIACHRAGLQFSAVHDSFWTHACDIDSMNQLL 1159
Query: 940 REKFVELYEAPILENLLESFQKSFPKLNF 968
RE FV ++ +++ L F+ + K F
Sbjct: 1160 REAFVRMHSDDVVKRLAAEFEVRYSKNLF 1188
>M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_57977 PE=3 SV=1
Length = 966
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/686 (39%), Positives = 383/686 (55%), Gaps = 63/686 (9%)
Query: 331 DDWKP-WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSP--PDIRPAFKHTFKTAMADS 387
+DW W Q R KVG ++ L++ A I ++ G + +PAF H+++
Sbjct: 184 EDWTSDWSQLVRVKVGGFLVDCLMDVATITRSMTDPNGEEIYSEEQPAFFHSYEYVRG-- 241
Query: 388 QKDIRRYGIIECDPLVTKGLEKS-AKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMR 445
+ G+I+ +P+V + + K KN + P +LPMLV P W D+G Y++ + MR
Sbjct: 242 ----HKLGVIKLNPVVAERMAKDRIKNTLHPRHLPMLVKPKPWLGPDQGGYMYNRTTAMR 297
Query: 446 THGAKQQCEAVKRA-PYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL-- 502
+ +Q ++ A LE ++ ALD LG+T W IN+R+ D++ +W SG R+ +
Sbjct: 298 YKDSVEQANYLRHASAAGNLELVYAALDVLGSTPWNINRRIFDIVLTVWNSGKRMCKMPP 357
Query: 503 VDRDDVXXXXXXXXXXXXXIRK-WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKG 561
V D R + ++ K ++ HS RC + K+ +AR +
Sbjct: 358 VVSDIPEPERPENYETDQQARAIYLQRHKLYAQQKANNHSDRCSVNYKIEIARAFLGDT- 416
Query: 562 FYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGV 621
+ PHNVDFRGRAYP+ P+L+H+G DL RG+L F E +PLG+ G WLK+HLANLY G
Sbjct: 417 IFMPHNVDFRGRAYPVPPHLSHIGDDLSRGLLLFGEAKPLGERGFWWLKVHLANLY--GY 474
Query: 622 DKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPET 681
DK + R+AF E HLDD+FDS D PL+GR WW +A+DP QCLA C+ L A+ S P
Sbjct: 475 DKGSFPERIAFVEAHLDDIFDSVDHPLDGRMWWTKADDPWQCLATCMELKAAIESGDPHK 534
Query: 682 TISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAE 741
+P+H DG+CNGLQHYAALG D GAA VNL DRP+DVY+ +A V +R+D
Sbjct: 535 YECALPIHQDGTCNGLQHYAALGGDTQGAAQVNLAVTDRPSDVYTYVADMVEGRIREDVA 594
Query: 742 KDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL 801
K + +V RK+VKQTVMT+VYGVTY+GAR QI+++L R I + E
Sbjct: 595 KGDKV------AMLLQGKVARKVVKQTVMTTVYGVTYIGARAQIEKQLASRGDIPAE-EC 647
Query: 802 FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR---------------- 845
++AS Y AK L ++ ++F A+ I W CA++IA + P R
Sbjct: 648 WAASSYLAKHVLGSIGDLFRGAKDIQLWFTSCARLIAKSIPPERIPHACGLVEEEKKKGR 707
Query: 846 --------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV- 884
WTTP+GLP VQPYR + R I T LQ + + V
Sbjct: 708 PTAKKHPVVRMKAEQMTSVVWTTPLGLPIVQPYRTVKRKQIMTGLQTVFISDPNQPAAVN 767
Query: 885 -KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
++Q++AFPPNF+HSLD +HMM+TA+ C+ GL FA VHDSYWTHA D+D M+ I+R+ F
Sbjct: 768 SQKQASAFPPNFIHSLDATHMMLTALECRAQGLTFASVHDSYWTHAGDIDNMSAIIRDTF 827
Query: 944 VELYEAPILENLLESFQKSFPKLNFP 969
+ L+ + +L L F + + P
Sbjct: 828 IALHSSDVLLQLHNEFLERYKGYKIP 853
>B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassiosira pseudonana
GN=rpoT PE=3 SV=1
Length = 1217
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/717 (37%), Positives = 404/717 (56%), Gaps = 79/717 (11%)
Query: 330 LDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQK 389
L D+ W + K+G +++LL+E + S+ GS P+ PAF ++ K
Sbjct: 522 LTDFAEWDPVLKVKLGAALIRLLLE----HTSFSKRRGSSPE--PAFFYSRKKT-----G 570
Query: 390 DIRRYGIIECDPLVTKGLEKSA----KNMVIP-YL------PMLVPPNNWTRYDKGAYLF 438
+++ G + P + K K + + P Y+ PM+VPP +W D G Y
Sbjct: 571 EMKFNGFVTIHPELLKIAMKEELSHDSSFISPRYMQNTRCQPMVVPPKDWKAVDDGGYET 630
Query: 439 LPSYVMRTHGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR 498
+ + MRT K Q +A++ A Q +FE L+ LG W+INQ +LD + W G
Sbjct: 631 IKTEFMRTRHCKTQKDAIRHADLTQ---VFEGLNVLGRIPWKINQNVLDAACKCWDDGIA 687
Query: 499 LAD----------------------LVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKEN 536
L D L+D D+ I K R ++N
Sbjct: 688 LGDIPSQDNHQVPPLPTPLDYRDFNLLDDDEKKVQVDAFRIYKDAITKHFR----FKQKN 743
Query: 537 NERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFA 596
+ HS RC LKL A+K ++ + ++P+NVDFRGRAYP+ P+L+ +GSDLCR +L FA
Sbjct: 744 MDLHSLRCSAMLKLNQAKKFRDFEEIFFPYNVDFRGRAYPVPPHLSIVGSDLCRALLMFA 803
Query: 597 EGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLE 656
+PLG +GL WLK+HLANL G +K+ ++ R F +++++ + + D P G WW+
Sbjct: 804 HPKPLGPNGLYWLKVHLANL--AGANKMSFDGRAQFADDNMESIRAAVDNPFGGNDWWMG 861
Query: 657 AEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLV 716
+DP Q LA C + +A+ S P + +PVHMDGSCNGLQHYAALGRDK+G AVNL
Sbjct: 862 FDDPFQGLATCHEIVKAIDSGDPANYMCSLPVHMDGSCNGLQHYAALGRDKVGGKAVNLC 921
Query: 717 RGDRPADVYSGIASRVLEIMRKDAEK--------------DPETNSXXXXXXXXXXQVDR 762
D P DVY G+ V+ + +DA++ + E +DR
Sbjct: 922 IADEPQDVYIGVMHEVIRRVAEDAQEMLPFDETKADLTKAEKELMKKIKSARLVNGLIDR 981
Query: 763 KLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIED--------DSELFSASCYAAKTTLT 814
+VK+TVMTSVYGVTY+GAR+QI +++E+ +ED ++E+ A Y A T+
Sbjct: 982 GVVKRTVMTSVYGVTYIGARNQISEKIEEK--LEDKGYDIDEMEAEINMACGYLASLTME 1039
Query: 815 ALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLS 874
+ ++F AR M+WL CA++IA +PV + +P+G+P VQPYRQ + T LQ +
Sbjct: 1040 VMGQLFTGARQTMNWLTACARLIAQQGQPVAFVSPVGVPVVQPYRQKRPFTVVTLLQNVV 1099
Query: 875 LRRETDKVLV--KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDV 932
L ++D + + +RQ +AFPPN+VHSLD SHM++TA+ +K GL F+ VHDSYWTH CDV
Sbjct: 1100 LSNDSDVLPLHRQRQVSAFPPNYVHSLDSSHMLLTAIEMQKRGLHFSAVHDSYWTHPCDV 1159
Query: 933 DEMNRILREKFVELYEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
+EMN ILRE F++LY P+LE+L +S++ +P + FP +P +G+ DL +V ++ YFF
Sbjct: 1160 EEMNDILRECFIDLYSQPLLEDLKDSWELRYPSITFPDVPTKGELDLNDVKSAPYFF 1216
>G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida tenuis (strain
ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315
/ NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_97960 PE=3 SV=1
Length = 1279
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/659 (40%), Positives = 385/659 (58%), Gaps = 51/659 (7%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVS----QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W AK+G + LLI A + PV G + +PAF HT++
Sbjct: 525 WDNTLHAKIGSILTSLLIHVAKV--PVKGTDPATGKTVTGSQPAFFHTYQYLQG------ 576
Query: 392 RRYGIIECDPLVTKGLEKSAKNMVIP--YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGA 449
++ G+++ + K L ++ +LPML PP W+ Y++G YLF + ++RT +
Sbjct: 577 QKLGVLKLHKNIIKQLSVDVDGSLLQPHFLPMLTPPRKWSSYNEGGYLFSQNTLVRTRDS 636
Query: 450 KQQCEAVKRAPY-NQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL---VDR 505
+ +K A L+ +++ L+ LGNT W +N+++L+V+++ W +G D+ VD
Sbjct: 637 PETLAYLKAASQRGDLDKVYDGLNVLGNTPWTVNRKVLEVMTKFWNTGDEFLDIPPVVDE 696
Query: 506 DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYP 565
++ +R+++R+V+ + + SQRC+ KL +AR EK F+ P
Sbjct: 697 PELPEPVPSNAEPNV-LREYQRKVRLAINISASAKSQRCDTNYKLEIARAFLGEKMFF-P 754
Query: 566 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLC 625
HN+DFRGRAYPM P+ NHLG+DL R + F +G+ LG+ GL WLK+HLANLY GVDK+
Sbjct: 755 HNIDFRGRAYPMSPHFNHLGNDLTRSLFLFWDGKQLGERGLWWLKVHLANLY--GVDKIP 812
Query: 626 YESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
E R FTE HLD + +SA+ P + WW + E P Q LA C L+EA + P +SH
Sbjct: 813 LEERAQFTETHLDKIRESAETPFDKDAWWTKGEKPWQVLACCFELNEAYKLEDPTQYVSH 872
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
VPVH DGSCNGLQHYAALG D GA VNL DRP DVYS +AS V + + DAE
Sbjct: 873 VPVHQDGSCNGLQHYAALGGDIEGARQVNLYPADRPQDVYSSVASIVQQRVDADAE---- 928
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA- 804
+ +++R++VKQTVMT+VYGVT+VGAR+QIK++LK + DSE S
Sbjct: 929 --AGEKHAVFLKDKINRRVVKQTVMTNVYGVTFVGAREQIKKQLK--VHFDSDSEENSGE 984
Query: 805 -SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA------------STNEP-----VRW 846
+ Y + A+ E+F A I WL + A++I+ S ++P V W
Sbjct: 985 YAQYLTQHVFAAVRELFSGAHLIQDWLGEAARIISKSVRVDYEDSTTSNDKPNHVSSVIW 1044
Query: 847 TTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETDKVLV--KRQSTAFPPNFVHSLDGSHM 904
TTP+GLP VQPYR I + IIKT+LQ +++ LV ++Q TA PPNFVHSLD +HM
Sbjct: 1045 TTPLGLPCVQPYRTIKKQIIKTNLQDVAITDPFGASLVDARKQKTALPPNFVHSLDATHM 1104
Query: 905 MMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
+MTA CK + FA VHDSYWTHA D+D +++ILRE+F++L+ +++ + + F+ +
Sbjct: 1105 LMTASTCKYENISFASVHDSYWTHASDIDVLSKILREQFIKLHSENLIQKVKDEFEARY 1163
>L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) OS=Pneumocystis
jiroveci (strain SE8) GN=PNEJI1_003333 PE=3 SV=1
Length = 1054
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/607 (43%), Positives = 359/607 (59%), Gaps = 51/607 (8%)
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTK--GLEKSAKNMVIPYLPMLVPPNNWTRY 431
PAF HT++ R+ G+I+ + V K G + N+ LPMLV P W +
Sbjct: 374 PAFYHTYQYQKG------RKLGVIKLNDQVMKQLGSQPLRGNIHPRLLPMLVEPKPWISW 427
Query: 432 DKGAYLFLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
D G Y S VMR+ + +Q + +K A N L+ IFE LD LG+T W IN + +V+
Sbjct: 428 DSGGYYLSKSTVMRSRDSIEQIQYLKIASERNNLKSIFEGLDVLGSTAWAINIPVFNVVI 487
Query: 491 QIWTSGGRLADLVDRD-DVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELK 549
++W SG A + + ++ W+ Q + I ++ + S RC+I K
Sbjct: 488 EVWNSGLEFAGIPPAESNIAFPPRPTSKDPADKISWQIQCRQIARDAQNKQSIRCDINYK 547
Query: 550 LAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 609
L +AR EK Y+PHN+DFRGRAYP+ P+ NHLG+DLCRG+L F E + +G+SGLRWL
Sbjct: 548 LEIARAFLHEK-MYFPHNLDFRGRAYPIPPHFNHLGNDLCRGLLTFHEAKEIGESGLRWL 606
Query: 610 KIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACIN 669
KIHLAN+ G DK + R AFT +L ++FDSAD PL+G WWL+ +DP Q LAAC
Sbjct: 607 KIHLANI--CGFDKESFLEREAFTVENLKNIFDSADNPLKGSGWWLKFDDPWQTLAACFE 664
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L+ ALR P P S +P+H DG+CNGLQHYAALG D LGA VNL +RP DVY+ +A
Sbjct: 665 LTAALRFPDPHKFKSRLPIHQDGTCNGLQHYAALGGDILGARQVNLEPSNRPYDVYTRVA 724
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
V E ++KDA++ ++ RK+VKQTVMT+VYGVTYVGAR+QI +L
Sbjct: 725 ELVNEQVQKDAKEG------NHLAVLLKDKIARKIVKQTVMTNVYGVTYVGARNQILNQL 778
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNE------- 842
K ++ E +F A I WL + AK I+ + +
Sbjct: 779 KNLNSL-------------------PREMLFVRAHKIQEWLNEAAKRISKSIDTSSYNGL 819
Query: 843 ----PVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETD--KVLVKRQSTAFPPNFV 896
V WT+P+ LP VQPYR+ R IKT+LQ + + D V ++Q TAFPPNF+
Sbjct: 820 NHMTSVIWTSPLNLPIVQPYRKSSRKQIKTNLQSIFITDPNDVSPVDTRKQQTAFPPNFI 879
Query: 897 HSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLL 956
HSLD +HM+M+A++CK AGL FA VHDSYWTHA DVD MN ILRE FV+L+E I+ENLL
Sbjct: 880 HSLDATHMLMSAISCKNAGLTFASVHDSYWTHAADVDNMNVILRETFVKLHEENIMENLL 939
Query: 957 ESFQKSF 963
F++ +
Sbjct: 940 NEFRERY 946
>A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_08623 PE=3 SV=1
Length = 1392
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/670 (39%), Positives = 374/670 (55%), Gaps = 65/670 (9%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVS----QLGGSPPDIRPAFKHTFKTAMADSQK 389
+ W RAKVG +++ L++ A + PV+ + + ++PAF H + +
Sbjct: 549 REWSIGIRAKVGSFLLESLLKVAKV--PVTLKHPETNETVTQMQPAFSHGQQYRLG---- 602
Query: 390 DIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHG 448
++ G+I + ++ + L++ +++ +LPMLV P WT + G +L P VMR
Sbjct: 603 --KKLGVINANKVIVELLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLRHPGKVMRVKN 660
Query: 449 AKQQCEAVKRAPYNQ--LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD 506
Q A +Q L +F L+ LG W+INQ + DV+ W SG +A+L
Sbjct: 661 GDQDQRNYADAAIDQGNLTTVFRGLNILGEQSWKINQPVFDVMLDAWNSGDAIANLAPDK 720
Query: 507 DVXXXXXXXXXXXXXI--RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ R+W VK + HSQRC +L +AR +++ K FY+
Sbjct: 721 PRLEYPPEPETSSDPLERRRWVTAVKKVENAKAGFHSQRCFQNFQLEIARALRD-KTFYF 779
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHNVDFRGRAYP+ PYLNH+G+D CRG++ F G+ LG SGL+WLK+HLAN+Y G DK
Sbjct: 780 PHNVDFRGRAYPIPPYLNHMGADHCRGLMIFGVGKKLGTSGLKWLKVHLANVY--GFDKA 837
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
R F H+D+++DSA PL G RWWL+AEDP QCLAAC+ L AL S P + +S
Sbjct: 838 SLSEREEFASKHIDEIYDSATNPLGGDRWWLQAEDPWQCLAACMELKNALESGDPASFVS 897
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
++PVH DG+CNGLQHYAALG D GA VNL GDRPADVY+ +A V E ++KD +
Sbjct: 898 YLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVADLVKESIKKDLLEG- 956
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL-KERCAIEDDSE--L 801
++ RK+VKQTVMT+VYGVT++GA+ Q++++L + DD+E
Sbjct: 957 -----HSKAKILDGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHRDLPDDTEDNP 1011
Query: 802 FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------------------ 843
+ + Y TAL MF A I WL DCA ++S+ P
Sbjct: 1012 GTLASYVVTKIFTALSTMFRGAHDIQYWLGDCASRVSSSLTPEQVNRIVEHASKQSARPS 1071
Query: 844 ----------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVK 885
V WTTP+ LP VQPYR +++TSLQ+LSL +D V +
Sbjct: 1072 KGDASKLEEMSQFKSSVIWTTPLNLPVVQPYRTNKSRLVRTSLQLLSLAEPHRSDPVSSR 1131
Query: 886 RQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVE 945
+Q FPPNF+HSLD +HM+++AV +A L FA VHDS+WTHA DVD MN ILR+ FVE
Sbjct: 1132 KQLQGFPPNFIHSLDATHMLLSAVKSNEAKLSFAAVHDSFWTHAADVDTMNTILRDAFVE 1191
Query: 946 LYEAPILENL 955
++ ++ L
Sbjct: 1192 IHSDDVIGRL 1201
>Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor) OS=Xenopus laevis
GN=polrmt PE=2 SV=1
Length = 1235
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/686 (38%), Positives = 397/686 (57%), Gaps = 49/686 (7%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGG-SPPDIRPAFKHTFKTAMADSQKDIRRY 394
W ++G ++ L+++ I+ P L P + P H + S + ++
Sbjct: 568 WPNTLLVQLGTHLVDLMVQE--IKVPNDLLSSRDDPKLIPVLYHMY------SFRSTKQI 619
Query: 395 GIIECDPLVTKGLEKSAKNMVIPY----LPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
G+I+ P+ ++ ++ A+ + + +PML PP W GAYL P+ +MR GA
Sbjct: 620 GLIKPHPIFSQ-IQLDARESCLTFESSVMPMLCPPVPWMSPRFGAYLLSPAKLMRCMEGA 678
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWT-SGGRLADL---VDR 505
Q ++++P QL P+ ++L+ LG WRINQ +LD+I I+ G D+ +
Sbjct: 679 VQHQLLLEKSPPGQLYPVLDSLNQLGMCAWRINQTILDIIVSIFNLKGNEKLDIPPPISE 738
Query: 506 DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYP 565
+R++ K+++E HS R + KL++A +++ K F++P
Sbjct: 739 APKMPEQPHGDVNSKDKLMHQRELARCRKKSSEMHSLRMDALYKLSIASHLRD-KIFWFP 797
Query: 566 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLC 625
HN+DFRGR YP PY NHLGSD+ R +L FAEGRPLG GL WLKIHL NL G +
Sbjct: 798 HNMDFRGRTYPCPPYFNHLGSDVTRALLLFAEGRPLGPKGLEWLKIHLINL-TGLKKRNS 856
Query: 626 YESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
+ R + + +DD+ DSAD PL+G+RWW+EA++P Q LA C+ +++A RSP P ISH
Sbjct: 857 LKERKEYADAIMDDILDSADNPLKGKRWWMEADEPWQALACCMEIAKASRSPDPTKYISH 916
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
PVH DGSCNGLQHYAALGRD++GA +VNL+ D P DVYSG+A +V E ++DA++ +
Sbjct: 917 FPVHQDGSCNGLQHYAALGRDEIGAKSVNLMPCDTPQDVYSGVAQQVEEFCKRDAQRGVK 976
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
+ RK+VKQTVMT VYGVT G R QI++RL+E + ++ AS
Sbjct: 977 IAQILDGF------IGRKVVKQTVMTVVYGVTRYGGRLQIEKRLREMDNFPKEY-VWEAS 1029
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRSI 865
Y + ++L+EMF R I WL + A++I+ + V W TP+GLP +QPY + +
Sbjct: 1030 HYLVQQVFSSLKEMFSGTREIQLWLTESARMISKSGNTVEWQTPLGLPIIQPYHRAKPVL 1089
Query: 866 IKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVH 922
++LQV++L+ D + +Q AFPPNF+HSLD +HMM+TA+ C GL F VH
Sbjct: 1090 FHSNLQVVNLQSSHDVNERPDTMKQKNAFPPNFIHSLDSTHMMLTALHCYSHGLTFVSVH 1149
Query: 923 DSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF-------------PK---- 965
D +WTH VD MN++ RE+FV L+ PIL+NL + + + P+
Sbjct: 1150 DCFWTHPDTVDVMNKVCREQFVALHSQPILQNLSQFLLQKYCHTLSSNSKAKMSPENLRM 1209
Query: 966 -LNFPPLPERGDFDLREVLNSQYFFN 990
L+F +PE GDFDLR+V++S YFF+
Sbjct: 1210 VLHFSNVPETGDFDLRQVIDSTYFFS 1235
>Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D05247g PE=3 SV=1
Length = 1263
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 297/886 (33%), Positives = 463/886 (52%), Gaps = 115/886 (12%)
Query: 128 KYKDTMLRKRQVKMETEAWEEAAKEYQELLEDICEQ---KLVPNLPYMKSLFLGWFEPLK 184
++ D + +RQ ++E +++ + + ++ + Q KL NL W++ +
Sbjct: 323 EFLDMINVERQRELENRSFDASKERWKYEFDQAASQGGLKLKKNL---NVRLWEWYQQML 379
Query: 185 SAIVAEQEVC------------KKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHN 232
+ E +C K++ ++ + PY + +KM VIT+ +L+ L +
Sbjct: 380 PVVRQEVALCQDLLEKEQKAPNKQNSDRLKYGPYLLLVEPEKMCVITILELLKLQSSGGV 439
Query: 233 GIGCARVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLS 292
G R A L +G +IE E R E + ++N K +
Sbjct: 440 TEGM-RTARAVLSVGRSIEMEFRSEKLLRSENKMFKEVNKRSHE-----FKMFVQNAKTA 493
Query: 293 DXXXXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLL 352
++ ++ M Q W + +AK+G ++ +L
Sbjct: 494 ------------------LRNMHVEENMIQ-------------WPSDVKAKIGSILISML 522
Query: 353 IETAYIQ----SPVSQ---LGGSPPDIRPAFKHTFKTAMADSQKDIRRYGIIECDPLVTK 405
I + + P+++ +G +P AF HTF+ + + GI++ +
Sbjct: 523 IHVSKVTVEGVDPITKEKVVGEAP-----AFCHTFQY------RSGTKIGILKIHRSLVN 571
Query: 406 GL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKR-APYN 462
L E+ N+ +LPMLV P WT ++ G Y + S ++R+ + +Q +K +
Sbjct: 572 QLSAERMTTNIQPQHLPMLVRPRPWTNWNSGGYNYSQSTLIRSRDSPEQIAYIKAVSEQG 631
Query: 463 QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VDRDDVXXXXXXXXXXXX 520
++ ++E L+ LGNT W IN++L +++S++W +G D+ V +
Sbjct: 632 SIDNVYEGLNVLGNTPWTINEKLFNIVSEVWNTGEGFLDIPPVLDNFEFPPQPARSEDPL 691
Query: 521 XIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPY 580
+++W+ + + + E S RC+ KL +AR EK FY+PHN+DFRGRAYP+ P+
Sbjct: 692 ILKEWRNKCRQMSNEFKGFKSYRCDSNYKLEIARAFLGEK-FYFPHNMDFRGRAYPLAPH 750
Query: 581 LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDV 640
NHLG+D+ R +L F G+ LG SGL+WLKIHLANLY G+DK +E RV F + HL ++
Sbjct: 751 FNHLGNDMTRSLLIFWNGKKLGTSGLQWLKIHLANLY--GMDKCSFEERVEFADTHLKEI 808
Query: 641 FDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHY 700
+SA+ PL+G RWW +A+ P Q LA CI L+EAL+ PE ISH PVH DG+CNGLQHY
Sbjct: 809 RESAEHPLDGTRWWTKADKPWQFLATCIELNEALKLDNPENFISHQPVHQDGTCNGLQHY 868
Query: 701 AALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQV 760
AALG D GA VNLV DRP DVY+ +A V + + A E + +
Sbjct: 869 AALGGDIEGARQVNLVPSDRPQDVYAFVAKLVTKRLENSAAAGDEQAAILKDL------I 922
Query: 761 DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMF 820
RK+VK+TVMT+VYGVT+VGA DQI + L + ++S S Y AK ++ E+F
Sbjct: 923 SRKVVKRTVMTNVYGVTFVGAADQIMKELDQYFDKPEESNELSR--YLAKHVFASIRELF 980
Query: 821 EAARSIMSWLADCAKVIAST-------NE-----------PVRWTTPIGLPAVQPYRQIG 862
AA I WL +CAK I+ + N+ V WT+P+GLP VQPYR +
Sbjct: 981 HAAHLIQDWLGECAKKISKSVRLDFDLNQSKTINSSDLMTSVIWTSPLGLPVVQPYRDLK 1040
Query: 863 RSIIKTSLQVLSLRRETDKVLV-----KRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLD 917
+ ++T+LQ + + TD + +RQ PPNF+HSLD SHM+++A+ C KAGLD
Sbjct: 1041 KKQVQTNLQTVFI---TDPFAINPINPRRQQAGLPPNFIHSLDASHMLLSAIQCGKAGLD 1097
Query: 918 FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
FA VHDSYWTHA +VD MNR+LR++F++L+E ++E L F + +
Sbjct: 1098 FAAVHDSYWTHASEVDNMNRLLRQEFIKLHEVDLIERLKNEFDERY 1143
>Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0K12628g PE=3 SV=1
Length = 1326
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/661 (40%), Positives = 379/661 (57%), Gaps = 56/661 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W Q RAK+G ++ LI A + + G+ P + PAF HT+
Sbjct: 568 WPQTVRAKIGSTLISFLIHVAKVS-----VEGTDPVTKEKVYGDAPAFAHTY------VY 616
Query: 389 KDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
+ + GII+ + L E+ ++ LPMLV P W + G YL+ S ++R+
Sbjct: 617 HNGSKLGIIKIHKALINRLNGERLLASVQPQLLPMLVKPRPWKGWKSGGYLYTQSILVRS 676
Query: 447 HGAKQQCEAVKR-APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
+ +Q ++ + ++ I++ L+ LG T W +N+++ DV+S++W G ++
Sbjct: 677 RDSPEQLAYLQAVSDSGAIDKIYDGLNVLGETAWTVNRKVFDVVSKVWNEGTNFLEIPGI 736
Query: 506 DDVXXXXXX--XXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D IR+WK + K + + + S RC++ KL +AR EK FY
Sbjct: 737 QDELKLLPPPPRSSDPTVIREWKLKNKELANKYSSDKSVRCDLNYKLEIARAFLGEK-FY 795
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PHN+DFRGRAYP+ P+ NHLG+DL R +L F +G+ LG GL WLK+HL+NL+ GVDK
Sbjct: 796 FPHNLDFRGRAYPLSPHFNHLGNDLSRSLLIFWKGKRLGPDGLNWLKVHLSNLF--GVDK 853
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ E RV FTE H++D+ DSA+ PL G+ WW A+ P Q LA C+ L+EAL+ PE I
Sbjct: 854 VPLEDRVKFTECHIEDIKDSAENPLNGKGWWKTADKPWQALATCMELNEALKLDNPEDYI 913
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH PVH DG+CNGLQHY+ALG D GA VNLV ++P DVYS +A V + K A K
Sbjct: 914 SHQPVHQDGTCNGLQHYSALGGDVEGATQVNLVPSEKPQDVYSFVAKLVEARLEKAAAKG 973
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL-F 802
E +V RK+VKQTVMT+VYGVTYVGA QI ++L AI DD
Sbjct: 974 DE------KALILKGKVSRKVVKQTVMTNVYGVTYVGATFQIAKQL---TAIFDDRAYSL 1024
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NEP-----V 844
S Y AK A+ E+FE A I WL +CAK I+ + ++P +
Sbjct: 1025 ELSKYLAKHVFAAVRELFEGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGDKPDYMSSI 1084
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGS 902
WTTP+GLP VQPYR G+ + T+LQ + + + + +RQ FPPNF+HSLD S
Sbjct: 1085 IWTTPLGLPIVQPYRDAGKKQVITNLQSVFISDPFAINPINSRRQKAGFPPNFIHSLDAS 1144
Query: 903 HMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKS 962
HM+++A C+ GLDFA VHDSYWTHA DVD+MN ++R+KF+EL+E +++ L E F +
Sbjct: 1145 HMLLSAAGCRDNGLDFASVHDSYWTHASDVDKMNVVIRDKFIELHEVDLIQRLKEEFDER 1204
Query: 963 F 963
+
Sbjct: 1205 Y 1205
>L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_02315 PE=3 SV=1
Length = 1438
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 311/943 (32%), Positives = 470/943 (49%), Gaps = 150/943 (15%)
Query: 135 RKRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSL---FLGWFEPL-------- 183
R RQ+K+E ++ A +++ + + L +L KSL W E L
Sbjct: 360 RLRQIKLEEDSIISAVDRWRKESASLSKMGLDTSL-QTKSLGARMWKWQEALEQRLNQEL 418
Query: 184 ----KSAIVAEQEVCKKSHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCA 237
K+ E+E + + + P+ LP DK+A +T+ M L ++ G+ A
Sbjct: 419 QSIDKAEATPEKEKSQLDVERCIYGPFLRYLPTDKLAAVTILTSMQCLSSHGTDKGMPLA 478
Query: 238 RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAA--IENGKLSDXX 295
VI + IG +E+E+ I G+ A I+N +
Sbjct: 479 SVI---MSIGANLEDES-ITETIRNNTTKQGWQQLNKSASAGKGLGLARVIKNKR----- 529
Query: 296 XXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKG--------LDDWKP-WGQEARAKVGC 346
+QQ + +++G D W W +AKVG
Sbjct: 530 -------------------TRQQLTDSLAKLVRGDSAAKHDLSDQWNTEWSATIKAKVGS 570
Query: 347 RVMQLLIETAYIQSPVSQLGGSPPD----IRPAFKHTFKTAMADSQKDIRRYGIIECDPL 402
++ LI+TA + PV+ + I+PAF HT + + ++ G+I +
Sbjct: 571 YLLSALIDTAKV--PVTMENTKTQELLTQIQPAFSHTHQYKIG------KKTGMILANRA 622
Query: 403 VTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQ-----QCEAV 456
+ L++ +++ +LPM+ P W+ +++G ++ P+ +R G + Q A+
Sbjct: 623 LVASLKREPVHSLLAKHLPMVAEPEPWSEFNQGGFISHPAKAVRIKGGDKNQRQYQEAAI 682
Query: 457 KRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXX 516
+R +E +F+ LD LG T W IN+ + D + + W +G +A+ +
Sbjct: 683 RRG---DMEQMFKGLDVLGKTSWVINRPVFDTMLEAWNTGEAIANFPAEEPKLEYPPEPP 739
Query: 517 XXXXXI--RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRA 574
RKW R +KTI + HS RC +L +AR ++EEK FY+PHN+DFRGRA
Sbjct: 740 ASKDPTERRKWIRSLKTIENTRSGFHSARCFQNFQLEIARSLREEK-FYFPHNLDFRGRA 798
Query: 575 YPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTE 634
YP+ PYLNH+G+D CRG+L+F +GR LG++GL+WL++HLAN++ G DK + R +T
Sbjct: 799 YPIPPYLNHMGADHCRGLLKFGKGRELGEAGLKWLRVHLANIH--GHDKASLKEREQYTV 856
Query: 635 NHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSC 694
+H+DD++DSA PL GRRWWL+AEDP QCLAAC+ L AL S P +SH+PVH DG+C
Sbjct: 857 DHIDDIYDSAMNPLNGRRWWLDAEDPWQCLAACLELKNALDSGDPTKFVSHLPVHQDGTC 916
Query: 695 NGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIM---RKDAEKDPETNSXXX 751
NGLQHYAALG D+ GA VNL GDRPADVY+ +A V E M RK+ K
Sbjct: 917 NGLQHYAALGGDEWGARQVNLEPGDRPADVYNAVAELVNEKMAVDRKNGNK--------- 967
Query: 752 XXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASC---YA 808
++ RK+VKQTVMT+VYGVTY+GA+ Q++++L + F+ S Y
Sbjct: 968 CAIWLEGKIKRKVVKQTVMTNVYGVTYIGAQAQVRKQLVAAHTDLPNEGSFNVSLLSGYV 1027
Query: 809 AKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------------------------- 843
A AL MF A I WL +CA I+++ P
Sbjct: 1028 ATKIFEALGTMFRGAHDIQFWLGECASRISTSVTPQQLDRLEHLHEEALDQRVPRLNRYH 1087
Query: 844 ---------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKR 886
V WTTP+ +P VQPYR ++T+LQ +++ +D V ++
Sbjct: 1088 ISMVDAEQQLQFKSSVIWTTPLRMPIVQPYRATKSRTVQTNLQQITISEPHRSDPVSKRK 1147
Query: 887 QSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVEL 946
Q FPPNFVHSLD +HMM++A+ C +AGL FA VHDS+WTHA D+D MN +LR+ F+++
Sbjct: 1148 QLQGFPPNFVHSLDATHMMLSALKCDEAGLSFAAVHDSFWTHAADIDTMNGVLRDAFIQM 1207
Query: 947 YEAPILENLLESFQKSFPKLNFPPLPERGDFDLREVLNSQYFF 989
+ ++ L F + +G L V + FF
Sbjct: 1208 HSDNVIARLAVEFDARY----------KGSLYLAHVKSDSEFF 1240
>F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelphis domestica
GN=POLRMT PE=3 SV=2
Length = 1253
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/684 (38%), Positives = 394/684 (57%), Gaps = 45/684 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
K W ++G +++++L+++ Y+ + +S + I P H + S I++
Sbjct: 588 KVWPDVLLVRLGTQLIEILVQSIYMPNSLSPSQATKRFI-PVLYHVY------SFLSIKQ 640
Query: 394 YGIIECDPLVTKGLEKSAKNMV---IPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
G I+ P + ++++A + + +PML PP WT + GAY+ P+ +MR G
Sbjct: 641 IGFIKPHPSFIQLVDEAAYTTLTFDVSVMPMLCPPIPWTSPNFGAYVLHPTKLMRCLDGT 700
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTS-GGRLADL----VD 504
Q + ++ P QL + +AL LGN W++NQ +LD++ I+ + G + D+ +
Sbjct: 701 VQHQQLLESCPQGQLNAVLDALTQLGNCAWKVNQPVLDLVISIFNAKGNKKLDVPPPVSE 760
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
K +R++ K E +S R + KL++A ++++ F++
Sbjct: 761 APTPPSYELSKGASSSEKAKLRREIAQCHKTAREMYSLRMDALYKLSIAHHLRDQI-FWF 819
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGRAYP P+ NHLGSD+ R IL FAEG+PLG +GL WLKIHL NL G K
Sbjct: 820 PHNMDFRGRAYPCPPHFNHLGSDMTRAILLFAEGKPLGPNGLDWLKIHLINL-TGLKKKE 878
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
++R+A+ L+D+ DSAD PL GR+WW++ ++P Q LA C+ ++ A+RSP P IS
Sbjct: 879 SLQARLAYANEILEDILDSADNPLTGRKWWMDVDEPWQALACCMEIANAIRSPDPTAYIS 938
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H P+H DGSCNGLQHYAALG+D +GA +VNL+ D P DVYSG+A V E+ ++DA +
Sbjct: 939 HFPIHQDGSCNGLQHYAALGQDVIGATSVNLMPCDVPQDVYSGVAQLVEELRKRDAAEGK 998
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIED--DSELF 802
++RKLVKQTVMT VYGVT G R QI++RLKE ++D ++
Sbjct: 999 SIAQVLEGF------INRKLVKQTVMTVVYGVTKYGGRLQIEKRLKE---LDDFPKEHIW 1049
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIG 862
AS Y ++ ++L EMF R I WL A VI+ + V+W TP+GLP +QPY +
Sbjct: 1050 EASLYLSQLVFSSLGEMFSTTREIQDWLTKSAHVISKSGSAVQWVTPLGLPIIQPYHKTQ 1109
Query: 863 RSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFA 919
+ I +LQ L L +D K +Q AFPPNF+HSLD +HMM+TA++C + GL F
Sbjct: 1110 KMTIPGNLQSLCLSSCSDVNQKPNTLKQKNAFPPNFIHSLDSTHMMLTALSCHRKGLTFV 1169
Query: 920 GVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF----PKLNFPPLPER- 974
VHD +WTHA VD MN + RE+FV L+ PIL++L + + P+L F P R
Sbjct: 1170 SVHDCFWTHASTVDIMNEVCREQFVNLHSQPILQDLSKFLVTKYCPWSPQLPFNSWPHRL 1229
Query: 975 --------GDFDLREVLNSQYFFN 990
G+ DL++V S YFF+
Sbjct: 1230 ILFSIPPIGNLDLQKVKESTYFFS 1253
>C3Y2C4_BRAFL (tr|C3Y2C4) DNA-directed RNA polymerase OS=Branchiostoma floridae
GN=BRAFLDRAFT_287284 PE=3 SV=1
Length = 804
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/649 (39%), Positives = 381/649 (58%), Gaps = 47/649 (7%)
Query: 374 PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTR 430
PA H + + ++I++ GII+ P++ + +E + ++ LPML+PP W+
Sbjct: 171 PALYHMY------TYRNIKQVGIIKPHPMLVQLVEGAQDTSLVFDSSLLPMLMPPVPWSS 224
Query: 431 YDKGAYLFLPSYVMRTHGAKQQCEAV-KRAPYNQLEPIFEALDSLGNTKWRINQRLLDVI 489
KG +L P+ +MR++ A Q E + ++ ++L PI ++L+ LG W+INQ +LD++
Sbjct: 225 VKKGGFLLSPTKLMRSNDATLQHELLLEKVGTSELYPILDSLNQLGACAWKINQPILDLV 284
Query: 490 SQIWTSGGR----LADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCE 545
+++ + G + V + ++Q+ + K +E HS R +
Sbjct: 285 IRVFNNKGSKELDIPQPVSEAPTFPKLGTEILTNGDKQAMRKQMAQVRKLRSEMHSLRMD 344
Query: 546 IELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 605
+ KL++A + + E FY+PHN+DFRGR YP P+ NHLGSD+ R IL FAEGRPLG+ G
Sbjct: 345 MLYKLSIANRFRHEI-FYFPHNMDFRGRVYPCPPHFNHLGSDVARSILVFAEGRPLGEKG 403
Query: 606 LRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLA 665
L WLKIHL NL G K R+ + ++++FDSAD P+ G +WW+ A++P Q LA
Sbjct: 404 LEWLKIHLVNL-TGFKKKNSQMERLEYANEMMEEIFDSADDPMTGHKWWMTADEPWQALA 462
Query: 666 ACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVY 725
C+ ++ A+RSP P+ +SH PVH DGSCNGLQHYAALGRD GA VNL+ + P DVY
Sbjct: 463 CCMEIANAVRSPDPQAYVSHFPVHQDGSCNGLQHYAALGRDITGAHQVNLMPAESPQDVY 522
Query: 726 SGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQI 785
SG+A +V ++ KDAE+ + + RK+VKQTVMT VYGVT G R QI
Sbjct: 523 SGVARQVEKLRAKDAEEGVKVAQVLDGF------IKRKVVKQTVMTVVYGVTRYGGRLQI 576
Query: 786 KRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR 845
+R+LK+ D ++ AS Y K +L E+F AR I WL + A++I+ V+
Sbjct: 577 QRQLKDIPDFPQD-HVWEASGYLVKKVFMSLREIFTLAREIQDWLTESARLISHVGSAVQ 635
Query: 846 WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR-----RETDKVLVKRQSTAFPPNFVHSLD 900
W TP+GLP VQPY ++ ++ + E+ + + +Q AFPPNF+HSLD
Sbjct: 636 WVTPLGLPVVQPYHKVKNKLLYHYWICIHGSYHLHFSESWRPDIIKQKNAFPPNFIHSLD 695
Query: 901 GSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQ 960
+HMM+T++ C++AG+ + VHD +WTHAC VD MNRI RE+FV L+ PILE+L +
Sbjct: 696 STHMMLTSLHCQQAGIQYVSVHDCFWTHACTVDTMNRICREQFVSLHSQPILEDLSKYLL 755
Query: 961 KSF----PKLNFPP---------------LPERGDFDLREVLNSQYFFN 990
K + P+L P +P +G+FDLR VL+S YFF+
Sbjct: 756 KEYGSLSPELQTSPTAVSKHDKLMEVLVDVPPKGEFDLRRVLDSTYFFS 804
>H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) OS=Oryzias latipes
PE=3 SV=1
Length = 1177
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/709 (38%), Positives = 397/709 (55%), Gaps = 67/709 (9%)
Query: 319 KMQQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR---PA 375
+M+Q G DD W ++G ++ ++++ I S + +P R P
Sbjct: 499 QMEQSSGPSLQGDD-TSWPHIVTLELGTHLVDIMVKNLKINSDIL----NPSQDRKLIPI 553
Query: 376 FKHTFKTAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVIPY----LPMLVPPNNWTRY 431
H + + + R+ G I+ P++ + +++ A + + +PML PP WT
Sbjct: 554 LYHMY------TFRSTRQVGFIKPHPILVQ-MQQEAMETRLTFDSYVMPMLCPPVPWTSV 606
Query: 432 DKGAYLFLPSYVMRT-HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVIS 490
GAY+ P+ +MRT GA Q + ++++ LEP+F++L+ LGN W+IN+ LLD+I
Sbjct: 607 KFGAYVLTPTKLMRTVEGATQHEQLLEKS--QHLEPVFDSLNQLGNCAWKINKPLLDIII 664
Query: 491 QIWTSGGRLADLVDRDDVXXXXXXX-----------XXXXXXIRKWKRQVKTIMKENNER 539
I+ G D+ D+ KR+V K+ +E
Sbjct: 665 SIFNDRGS-----DKLDIPPPMSEAPKIPHFNPQDPAYTASQKALMKREVINAKKKGSEM 719
Query: 540 HSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 599
HS R + KL++A M+EE F++PHN+DFRGR YP PY NHLGSD+ R +L FAEG+
Sbjct: 720 HSLRMDALYKLSIAHHMREET-FWFPHNMDFRGRTYPCPPYFNHLGSDVTRAMLVFAEGK 778
Query: 600 PLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAED 659
PLG GL WLKIHL NL G + + R+ + + ++D+ DSAD PL GR+WW+ A++
Sbjct: 779 PLGPKGLDWLKIHLVNL-TGLKKRSSLQGRLQYANSIMEDILDSADNPLHGRKWWMNADE 837
Query: 660 PLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGD 719
P Q LA C+ ++ A RSP P +SH PVH DGSCNGLQHYAALGRD +GA +VNLV D
Sbjct: 838 PWQALACCMEIARAARSPDPAKFVSHFPVHQDGSCNGLQHYAALGRDVIGATSVNLVPCD 897
Query: 720 RPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYV 779
P DVYSG+A +V E+ +DA + + RK+VKQTVMT VYGVT
Sbjct: 898 VPQDVYSGVAQQVEELRARDARDGLKIAQVLEGF------ISRKVVKQTVMTVVYGVTRY 951
Query: 780 GARDQIKRRLKERCAIED--DSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVI 837
G R QI++RLKE IE+ ++ AS Y + L+EMF R I WL + A++I
Sbjct: 952 GGRLQIEKRLKE---IENFPKEHIWDASHYLVRLVFNGLKEMFTGTREIQDWLTESARLI 1008
Query: 838 ASTNEPVRWTTPIGLPAVQPYRQIGRSI-IKTSLQVLSLRRETD---KVLVKRQSTAFPP 893
+ V W TP+GLP +QPY + + +K+S+Q ++L+ D + +Q AFPP
Sbjct: 1009 SKCGHTVEWVTPLGLPIIQPYHRTRNQVQLKSSIQHINLQISHDSKERPDTVKQKNAFPP 1068
Query: 894 NFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILE 953
NF+HSLD +HMM+TA+ C AGL F VHD +WTHA VD MN++ RE+FV L+ PIL+
Sbjct: 1069 NFIHSLDSTHMMLTALHCYSAGLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQ 1128
Query: 954 NLLE------------SFQKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
L + ++S K P P GDFDL++V S YFF+
Sbjct: 1129 ELSDFLLHKYCSGSGLPLERSRSKALTPSPPSPGDFDLQQVKESTYFFS 1177
>F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus tropicalis
GN=polrmt PE=3 SV=1
Length = 1225
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/701 (37%), Positives = 397/701 (56%), Gaps = 79/701 (11%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGG-SPPDIRPAFKHTFKTAMADSQKDIRRY 394
W ++G ++ L+++ I+ P L P + P H + S + ++
Sbjct: 558 WPNSLLVQLGTHLVDLMVQE--IKVPNDLLSSRDDPKLIPVLYHMY------SFRSTKQI 609
Query: 395 GIIECDPLVTKGLEKSAKNMVIPY----LPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
G+I+ P+ ++ ++ A + + +PML PP W GAYL P+ +MR GA
Sbjct: 610 GLIKPHPIFSQ-IQSDAGESCLTFESSVMPMLCPPVPWLSPRFGAYLLSPAKLMRCMEGA 668
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGR----------- 498
Q ++++P QL P+ ++L+ LG WRINQ +LD+I I+ G
Sbjct: 669 VQHQLLLEKSPPGQLYPVLDSLNQLGMCAWRINQPILDIIVSIFNEKGNEKLDIPPPLSE 728
Query: 499 --------LADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKL 550
DL RD + +R++ K+++E HS R + KL
Sbjct: 729 APKLPEQPHGDLNSRDKMMH---------------QRELARCRKKSSEMHSLRMDALYKL 773
Query: 551 AVARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 610
++A +++ K F++PHN+DFRGR YP PY NHLGSD+ R +L FAEGRPLG GL WLK
Sbjct: 774 SIASHLRD-KIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRALLLFAEGRPLGPKGLEWLK 832
Query: 611 IHLANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINL 670
HL NL G + + R + ++ +DD+ DSAD PL+G+RWW+EA++P Q LA C+ +
Sbjct: 833 THLINL-TGLKKRNSLQERKEYADSVMDDILDSADNPLKGKRWWMEADEPWQALACCMEI 891
Query: 671 SEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIAS 730
+ A RSP P ISH PVH DGSCNGLQHYAALGRD++GA +VNL+ D P DVYSG+A
Sbjct: 892 ANASRSPDPTKYISHFPVHQDGSCNGLQHYAALGRDEIGAKSVNLMPCDIPQDVYSGVAQ 951
Query: 731 RVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 790
+V E ++DA++ + + RK+VKQTVMT VYGVT G R QI++RL+
Sbjct: 952 QVEEFRKRDAQRGVKIAQILDGF------IGRKVVKQTVMTVVYGVTRYGGRLQIEKRLR 1005
Query: 791 ERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
E + ++ AS Y + ++L+EMF R I WL + A++I+ + V W TP+
Sbjct: 1006 ELDNFPKEY-VWEASHYLVQQVFSSLKEMFSGTREIQLWLTESARMISKSGNTVEWQTPL 1064
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMT 907
GLP +QPY + + +++LQV++L+ D + +Q AFPPNF+HSLD +HMM+T
Sbjct: 1065 GLPIIQPYHRTKPVLFQSNLQVVNLQSSHDVNERPDTMKQKNAFPPNFIHSLDSTHMMLT 1124
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPK-- 965
A+ C GL F VHD +WTH VD MN++ RE+FV L+ PIL+NL + + + +
Sbjct: 1125 ALHCYSHGLTFVSVHDCFWTHPDTVDVMNKVCREQFVALHSQPILQNLSQFLLQKYCQTL 1184
Query: 966 ----------------LNFPPLPERGDFDLREVLNSQYFFN 990
L+F +PE G+FDL++V++S YFF+
Sbjct: 1185 SSDKMAKMSPENLRMTLHFSNVPETGNFDLKQVIDSTYFFS 1225
>Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN7609.2 PE=3 SV=1
Length = 1391
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 281/695 (40%), Positives = 376/695 (54%), Gaps = 74/695 (10%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W +AKVG +M LL + A + PV++ + R P F+H+++
Sbjct: 534 WATAIKAKVGAVLMSLLYDVAKVPVPVNEAAAAKKIKRRDEVVMQPVFQHSYQITWG--- 590
Query: 389 KDIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPS-YVMRT 446
RR G I +P + K L + A++++ LPML P W Y GAY + + +V T
Sbjct: 591 ---RRTGYIHVNPEMIKLLTREPAEDLLGRQLPMLCKPRPWKGYKDGAYFYHQNLFVRST 647
Query: 447 HGAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
G Q VK A N L+ I + LD LG T W IN+ + +V+ + W +G +ADL
Sbjct: 648 PGESLQPTYVKAALENDGLKMIRKGLDILGGTGWVINRDVFNVMLEAWNTGEPIADLAPL 707
Query: 506 DDVXXXXXXXXXXX--XXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D ++W +V+ I + HSQRC ++ VAR E FY
Sbjct: 708 DPDLPIPPKPSPEEGYEAEKEWHTKVRDIENQRGGYHSQRCFQNFQMEVARSYLNET-FY 766
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
PHN+DFRGRAYP+ PYLN + +D RG+L F+E +PLG+SGLRWLKI +ANL G DK
Sbjct: 767 LPHNMDFRGRAYPIPPYLNQMAADNARGLLLFSEAKPLGESGLRWLKIQIANL--AGFDK 824
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
R F +HLDDV DSA+ L GRRWWL+AEDP QCLAAC L AL+ P P
Sbjct: 825 ASLSEREQFAMDHLDDVLDSANNGLHGRRWWLQAEDPWQCLAACCELRNALQHPNPTEYA 884
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLE-IMRKDAEK 742
S +P+H DGSCNGLQHYAALG DKLGA VNL DRP+DVYS +A V E + + A+
Sbjct: 885 SRLPIHQDGSCNGLQHYAALGGDKLGAQQVNLEPSDRPSDVYSAVAQYVKEAVATEAAQG 944
Query: 743 DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELF 802
DP ++ RK+VKQTVMT+VYGVT++GA QI+++L D E
Sbjct: 945 DP-------IAKMLEGKITRKVVKQTVMTNVYGVTFIGAMKQIRKQLANHYPELSDHEKK 997
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP------------------- 843
+ + Y A+ AL MFE AR I WL D A I + P
Sbjct: 998 TGAIYIARKVFQALGTMFEGARDIQHWLGDSANRITQSLPPEQIEDLAKEVLNPSFSTLP 1057
Query: 844 -----------------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRRETD 880
V WTTP+GLP VQPYR + TS Q LS+ +
Sbjct: 1058 LTSRGKSKKSLSSSDPSAHFKTTVIWTTPLGLPVVQPYRNRLPRRVVTSFQSLSVVEQDS 1117
Query: 881 KVLVKR--QSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRI 938
+ V R Q AFPPNF+HSLD +HMM++A+AC +AGL F+ VHDS+WTH DVD MNRI
Sbjct: 1118 RYCVTRRKQLQAFPPNFIHSLDATHMMLSAIACHQAGLTFSAVHDSFWTHPSDVDSMNRI 1177
Query: 939 LREKFVELYEAPILENLLESFQKSFPK-LNFPPLP 972
LRE FV+++ +++ L F+ + + L++ +P
Sbjct: 1178 LREAFVQMHSDDVIKRLAAEFEVRYGRNLHYARVP 1212
>M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna polymerase
protein OS=Eutypa lata UCREL1 GN=UCREL1_3776 PE=4 SV=1
Length = 1344
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 392/686 (57%), Gaps = 71/686 (10%)
Query: 332 DWKPWGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADS 387
D + W RAKVG ++ L+++A + + P ++ S I+PA H+
Sbjct: 463 DTRSWPIYIRAKVGAVLLGALLDSAKVNVVREHPETKALIS--QIQPAMTHSIM------ 514
Query: 388 QKDIRRYGIIECDP-LVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
+ R+ G++ + LV + + + +LPMLV P WTR+DKG +L P++++RT
Sbjct: 515 HRRGRKVGVVLANKWLVDLMMREPRGEFLARHLPMLVEPEPWTRFDKGGFLNSPAHLVRT 574
Query: 447 HGAK--QQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL-- 502
G + Q+ A +E + + LD LG T W++NQ + V+ + W SG +LA++
Sbjct: 575 KGGEKDQRIYAEAALERGDMEQVSKGLDVLGRTAWQVNQNVFKVMLEAWNSGEKLANIPP 634
Query: 503 VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGF 562
+ + R+W + VK + HS+RC I +L +AR K++ F
Sbjct: 635 LHPNIPTPPEPAPSDDMMHRREWLKAVKAAENLKSGLHSERCFINFQLEIARAFKDQT-F 693
Query: 563 YYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 622
Y+PHN+DFRGRAYP+ PYLNH+G+D RG+L FA GR LG+SGLRWLK+HLAN++ G D
Sbjct: 694 YFPHNMDFRGRAYPIPPYLNHMGADHARGLLRFAVGRELGESGLRWLKVHLANVF--GYD 751
Query: 623 KLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETT 682
K + R +F ++L ++ DSAD PL G+RWWL+AEDP QCLA C L AL SP P
Sbjct: 752 KASLKERESFAMDNLANIHDSADNPLNGQRWWLKAEDPWQCLATCFELKAALESPEPTKY 811
Query: 683 ISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK 742
+SH+PV MDG+CNGLQHYAALG D GA VNLV GDRPADVYS +A+ V E + +D +
Sbjct: 812 VSHIPVQMDGTCNGLQHYAALGGDLWGAQQVNLVPGDRPADVYSAVANLVKENIAEDVKA 871
Query: 743 DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSEL 801
D ++ RK+VKQTVMT+VYGVT+VGA+ Q+ ++L +++++ +
Sbjct: 872 D------NFLAKAIDGKITRKVVKQTVMTNVYGVTFVGAKAQVLKQLDAAYPNLQEETGV 925
Query: 802 FSA--SCYAAKTTLTALEEMFEAARSIMSWLADCA------------------------- 834
++ + Y A AL MF A I WL +CA
Sbjct: 926 PTSLVASYVATKIFKALSTMFRGAHDIQYWLGECAGRVCRALTPEQLDLLADGTPTPKPI 985
Query: 835 ---------------KVIASTNEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--R 877
++++S + WTTP+ +P VQPYR+ +++TSLQ L+L+
Sbjct: 986 KRRAPVKSKSKLAIDEILSSFRSTIVWTTPLRMPVVQPYRKTITRVVETSLQNLNLQIPE 1045
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
+D V ++Q FPPNF+HSLD SHM+++A+ C + GL FA VHDS+WTHA D+D MNR
Sbjct: 1046 RSDPVNRRKQLQGFPPNFIHSLDASHMLLSALECDELGLSFAAVHDSFWTHAADIDTMNR 1105
Query: 938 ILREKFVELYEAPILENLLESFQKSF 963
+LR+ FV ++ ++ L F+ +
Sbjct: 1106 VLRDAFVRIHCEDVIGRLGAEFEARY 1131
>M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphophorus maculatus
GN=POLRMT PE=3 SV=1
Length = 1321
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/641 (40%), Positives = 374/641 (58%), Gaps = 58/641 (9%)
Query: 389 KDIRRYGIIECDPLVTKGLEKSAKNMVIPY----LPMLVPPNNWTRYDKGAYLFLPSYVM 444
+ R+ G I+ P++T+ +++ A + + +PML PP WT GAYL P+ +M
Sbjct: 700 RSTRQVGFIKPHPILTQ-MQQEAMETTLTFDSSVMPMLCPPVPWTSEKFGAYLLTPAKLM 758
Query: 445 RT-HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLV 503
RT HGA Q E +++ P L P+F++L+ L N W IN+ +LD+I I+ G
Sbjct: 759 RTTHGATQHEELLEKCP--NLHPVFDSLNQLSNCAWMINKPILDIIISIFNDRGS----- 811
Query: 504 DRDDVXXXXXXX-----------XXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
D+ D+ KR+V K+ +E HS R + KL++
Sbjct: 812 DKLDIPPPLSEAPKIPHFNPQDPAYTASEKAHMKREVINAKKKCSEMHSLRMDALYKLSI 871
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
A M+ +K F++PHN+DFRGR YP PY NHLGSD+ R L FAEG+PLG GL WLKIH
Sbjct: 872 AHHMR-DKLFWFPHNMDFRGRTYPCPPYFNHLGSDVTRATLMFAEGKPLGPKGLDWLKIH 930
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
L NL G + + R+ + ++ ++D+ DSAD PL G++WW+EA++P Q LA C+ ++
Sbjct: 931 LVNL-TGLKKRSSLQGRLEYADSIMEDILDSADNPLNGKKWWMEADEPWQALACCMEIAN 989
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
A+RSP P +SH PVH DGSCNGLQHYAALGRD +GA +VNL+ + P DVYSG+A +V
Sbjct: 990 AVRSPDPTKFVSHFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEVPQDVYSGVAQQV 1049
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
E+ +DA K + + RK+VKQTVMT VYGVT G R QI++RLKE
Sbjct: 1050 EELRTRDAAKGLKIAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKE- 1102
Query: 793 CAIED--DSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
I++ ++ AS Y + + L+EMF R I WL + A++I+ V W TP+
Sbjct: 1103 --IDEFPKEHVWDASHYLVRLVFSGLKEMFTGTREIQDWLTESARLISKCGHTVEWVTPL 1160
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMT 907
GLP +QPY + ++K+++Q ++L+ D + +Q AFPPNF+HSLD +HMM+T
Sbjct: 1161 GLPIIQPYHRTRNLVLKSTMQHINLQISHDTKERPDTVKQKNAFPPNFIHSLDSTHMMLT 1220
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL------------ 955
++ C AGL F VHD +WTHA VD MN+I RE+FV L+ PIL+ L
Sbjct: 1221 SLHCYSAGLTFVSVHDCFWTHALTVDTMNKICREQFVALHSQPILQGLSNFLLLKYCSTI 1280
Query: 956 -LESFQKSFPK-----LNFPPLPERGDFDLREVLNSQYFFN 990
E+ K + + L +P+ GDFDL+ V S YFF+
Sbjct: 1281 QREAKNKKYQEYRRLMLLLAKVPQTGDFDLQRVKESTYFFS 1321
>M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela putorius furo
GN=Polrmt PE=3 SV=1
Length = 1231
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/691 (38%), Positives = 388/691 (56%), Gaps = 53/691 (7%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ ++L+E + V+ G P + P H + S + R+
Sbjct: 560 QPWPLSVLVQLGKKLAEMLVEAVRMPGSVAAPQG-PGTLIPVLYHVY------SFRSFRQ 612
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
GI++ P + L +A++ + +PML PP WT GA+L P+ +MR+ G
Sbjct: 613 IGILKPHPAFIELLATAAEHTLTFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLEGT 672
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--------RLAD 501
Q + P L +AL LGN WR+N R+LD++ +++T+ G ++
Sbjct: 673 VQHQRLLDSCPPADLHGALDALTQLGNCAWRVNGRVLDLVLELFTAKGCPHLGVPAPASE 732
Query: 502 LVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKG 561
D +R R++ +K E HS R + +L++A+ ++ +
Sbjct: 733 APRPPDGRLPPGASPAQKAEVR---RELARCLKVAREMHSLRSDALYRLSLAQHLRH-RV 788
Query: 562 FYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGV 621
F+ PHN+DFRGR YP P+ +HLGSDL R +LEFA+GRPLG GL WLK+HL NL G
Sbjct: 789 FWLPHNMDFRGRTYPCPPHFHHLGSDLARALLEFAQGRPLGARGLDWLKVHLVNL-TGLK 847
Query: 622 DKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPET 681
+ ++R+AF + + D+ DSADRP+ GR+WW++ ++P Q LA C+ ++ A+R+P P
Sbjct: 848 KRESLQARLAFADEVMKDILDSADRPMTGRKWWMQVDEPWQALACCMEIARAVRAPDPAA 907
Query: 682 TISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAE 741
+SH PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V R+DA+
Sbjct: 908 YVSHFPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSDVPQDVYSGVAAQVEVFRRQDAK 967
Query: 742 KDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL 801
+ + RK+VKQTVMT VYGVT G R QI+RRL+E + +
Sbjct: 968 RGVGVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSDFPQEF-V 1020
Query: 802 FSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQI 861
+ AS Y + +L+EMF R+I WL + A++IA T V+W TP+G+P +QPY Q
Sbjct: 1021 WEASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAHTGSAVQWVTPLGVPVIQPYHQD 1080
Query: 862 GRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDF 918
+ +I +Q L+ + D K +Q FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1081 AKVLIAGGMQSLTFSQSGDTSQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 1140
Query: 919 AGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF---PKLNFP------ 969
VHD +WTHA DV+ MN++ RE+FV L+ PIL NL K + +L P
Sbjct: 1141 VSVHDCFWTHAADVEVMNQVCREQFVSLHSQPILHNLSRFLVKQYCSSTRLRSPKHSKNL 1200
Query: 970 ----------PLPERGDFDLREVLNSQYFFN 990
+PE G DL +V +S YFF+
Sbjct: 1201 WMGKLKDTLKSVPETGALDLEQVKHSTYFFS 1231
>Q3V3C0_MOUSE (tr|Q3V3C0) DNA-directed RNA polymerase (Fragment) OS=Mus musculus
GN=Polrmt PE=2 SV=1
Length = 1069
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/688 (38%), Positives = 385/688 (55%), Gaps = 47/688 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ +LL++ + ++ G+ I P H + S + R+
Sbjct: 398 QPWSVPVLLQLGKQLAELLVQAVQMPRSLAARQGAQRSI-PVLYHVY------SFRSYRQ 450
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGA 449
GI++ P T LE +A+ + +PML PP WT GAYL + +MR T G
Sbjct: 451 VGILKPHPAFTHLLETAAEPTLTFETTEVPMLCPPLPWTSLHSGAYLLSSTKLMRATEGT 510
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD--RDD 507
Q +++ P QL +AL LGN WR+N LLD++ QI+ G + V R +
Sbjct: 511 TQHQRLLEQCPPAQLHGPLDALTQLGNCAWRVNGHLLDLVLQIFRDKGCMPLGVPPPRSE 570
Query: 508 VXXXXXXXX---XXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ ++++ +K E HS R E +L++A+ ++ + F+
Sbjct: 571 APRPARYQLPPGSTPVHKSELRKELARCLKVAREMHSLRSEALYRLSLAQHLRH-RVFWL 629
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFAEGRPLG GL WLKIHL NL G
Sbjct: 630 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPRGLDWLKIHLINL-TGLKKGD 688
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
R+AF + ++++ DSAD PL GR+WW+EA++P Q LA C+ ++ A+RSP P IS
Sbjct: 689 SLRMRLAFADEVMEEILDSADNPLTGRKWWMEADEPWQTLACCMEVAHAVRSPDPAAYIS 748
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DGSCNGLQHYAALGRD +GAA+VNL D P DVY +A++V E ++DA++
Sbjct: 749 HLPVHQDGSCNGLQHYAALGRDSVGAASVNLTPSDLPQDVYREVATQVEEFRQQDAKEGL 808
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ RK+VKQTVMT VYGVT G R QI++RL+E + ++ A
Sbjct: 809 RVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VWEA 861
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF + R+I WL + A +I+ PV W TP+G+P +QPY + +
Sbjct: 862 SHYLVRQVFKSLQEMFTSTRAIQHWLTESANLISHAGWPVEWVTPLGIPIIQPYHRESKV 921
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+K LQ ++L D K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 922 QVKGGLQSITLTSSVDESQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLIFVSV 981
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN-------------- 967
HD +WTHA D+ MN + RE+FV L+ PILE+L + +K F ++
Sbjct: 982 HDCFWTHAADIPTMNEVCREQFVRLHSQPILEDLAKFLKKRFCSVSSIKSLKSSERALVT 1041
Query: 968 -----FPPLPERGDFDLREVLNSQYFFN 990
LP+ G FDL +V+ S YFF+
Sbjct: 1042 KLQETLQSLPKTGTFDLGQVIRSTYFFS 1069
>K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_69188 PE=3 SV=1
Length = 967
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 289/812 (35%), Positives = 438/812 (53%), Gaps = 98/812 (12%)
Query: 204 APYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCARVIHAALQIGEAIENEARIXXXXX 261
+PY + + +++++IT+ ++M L ++ +G+ AR A + +G+A+E E +
Sbjct: 90 SPYLSLVNPERLSLITIMEIMRLQGSSGVADGMKTAR---ALISVGKAVEMEYK------ 140
Query: 262 XXXXXXXXXXXXXEEPDGEFY-HAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKM 320
+ G Y HAA +N L D K
Sbjct: 141 AQMIKKPDNVADSKSAGGNLYSHAAYKN--LRD-------------------------KR 173
Query: 321 QQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVS-QLGGSPPDIRPAFKHT 379
V I+G + W Q R+K+G ++ L+E A ++ + G +++PAF H
Sbjct: 174 LAVSKEIEGEERSLGWSQVTRSKIGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHA 233
Query: 380 FKTAMADSQKDIRRYGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYL 437
++ R G+I +P+V++ L K+ + P +LPMLV P W ++ G YL
Sbjct: 234 YEYLRGS------RLGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYL 287
Query: 438 FLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSG 496
+ + VMR + +Q +K A + Q+E ++ LD L +T W+IN+++ +V+ + W SG
Sbjct: 288 YSKTSVMRFKDSIEQQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSG 347
Query: 497 GRLAD----LVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
RL + D + + + K + HS RC + KL +
Sbjct: 348 ERLGKVPPAMYDGPEPVQPQVEELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEI 407
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
AR ++ FY+PHN+DFRGRAYP+ +LNH+G DLCRG+L FAE +PLG GLRWLKIH
Sbjct: 408 ARAFLNDE-FYFPHNLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIH 466
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEG---RRWWLEAEDPLQCLAACIN 669
+ANLY G DK ++ RV + + HLD ++ +A R L+ + WWLEA DP Q LAA I
Sbjct: 467 IANLY--GYDKANFDDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIE 524
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L +AL S PE S +PVH DG+CNGLQHYAALG D GA VNL D+P+DVYS +
Sbjct: 525 LHDALESGNPEAFESSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVG 584
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
+ V E + KD E S ++ RK+VKQTVMT+VYGVT++GAR+QI+++L
Sbjct: 585 AMVEEAIAKDCE------SGDKYALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQL 638
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR---- 845
K+R I ++ E +SA+ Y A+ L + +F+ A+SI +WL A+++A + R
Sbjct: 639 KDRKDIPEE-ECWSAAAYLARLVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPEL 697
Query: 846 --------------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--R 877
WTTP+GLP VQPYR+I R I T++Q + +
Sbjct: 698 MAEAAAAKKGQLPMNRLKKEQMTSVIWTTPLGLPIVQPYRKIARKQIDTAIQTVYISDPN 757
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
+V +Q++AFPPN++HSLD +HMM+TA+ C+K L FA VHDSYWTHA D+DEM+
Sbjct: 758 RLAEVNSAKQASAFPPNYIHSLDATHMMLTALECRKKNLTFASVHDSYWTHAADIDEMSS 817
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFP 969
+R+ F+ L+ + +L L F + + P
Sbjct: 818 TIRDTFIALHSSDVLGQLRREFLQRYHDYKIP 849
>I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0G03490 PE=3 SV=1
Length = 1352
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/661 (39%), Positives = 381/661 (57%), Gaps = 56/661 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W Q ARA++G ++ L+ A + + G P PAF H+++
Sbjct: 597 WPQAARAQIGSIMISTLLHVAKVN-----VRGHDPKTNKYVYGELPAFSHSYQYHNG--- 648
Query: 389 KDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
+ G+++ + K L E+ A ++ +PM+V P W ++ G Y + S ++RT
Sbjct: 649 ---AKIGVLKIHKSLIKQLNGERLATSVQPQQMPMIVKPRKWVSWNSGGYHYSQSILIRT 705
Query: 447 HGAKQQCEAVKRAPYNQLEP-IFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--V 503
+ +Q +K L P I+ L+ +G T W +N+++ +V+S++W +G + D+ +
Sbjct: 706 RDSPEQVAYLKAVSEENLIPTIYSGLNVIGLTGWTVNRKVFNVLSEVWNTGKQFLDIPGI 765
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D V +R+WK + K I + + S RC+ KL +AR EK Y
Sbjct: 766 QDDMVVLPPLPSNAEPEEVREWKLKNKEIANKISSDRSVRCDSNYKLEIARAFLGEK-IY 824
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PHN+DFRGRAYP+ P+ NHLG+D+ RG+L F +GR LG GL+WLK+HLANL+ G DK
Sbjct: 825 FPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGRRLGPQGLKWLKVHLANLF--GYDK 882
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ R+AF H++D+ DSA+ PL+G+ WW A+ P Q LA C+ L+EA + PE I
Sbjct: 883 ASLDDRIAFANQHIEDLKDSAEHPLDGKGWWQSADKPWQALATCMELNEAFKLENPEDFI 942
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH PVH DG+CNGLQHYAALG D GA VNLV +P DVY+ +A V + A++
Sbjct: 943 SHQPVHQDGTCNGLQHYAALGGDVEGAIQVNLVPSPKPQDVYNHVAKLVEARLDVAAKEG 1002
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSEL-F 802
ET ++ RK+VKQTVMT+VYGVT++GA QI ++L E+ DD +L F
Sbjct: 1003 DET------AKILQGKITRKVVKQTVMTNVYGVTFIGATRQIAKQLTEKF---DDKQLAF 1053
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIA-------------STNEP-----V 844
Y AK A+ E F+ A I WL +C+K I+ + N+P V
Sbjct: 1054 EYGGYLAKHVFAAIRESFKGAHEIQDWLGECSKRISRAIRLDVDSKSFRNGNKPDFMSSV 1113
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGS 902
WTTP+GLP VQPYR + IKT+LQ + + + V +RQ + FPPNF+HSLD S
Sbjct: 1114 IWTTPLGLPIVQPYRDESKKQIKTNLQTIFIADPLAVNPVNARRQKSGFPPNFIHSLDAS 1173
Query: 903 HMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKS 962
HM+++A C + GLDFA VHDSYWTHACDVD+MN +LRE+F++L+E ++E L F +
Sbjct: 1174 HMLLSATKCGEHGLDFASVHDSYWTHACDVDKMNYLLREEFIKLHEVDLIERLKTEFNQR 1233
Query: 963 F 963
+
Sbjct: 1234 Y 1234
>K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_200200 PE=3 SV=1
Length = 967
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 289/812 (35%), Positives = 438/812 (53%), Gaps = 98/812 (12%)
Query: 204 APYFNDLPADKMAVITMHKLMGLLMTN--HNGIGCARVIHAALQIGEAIENEARIXXXXX 261
+PY + + +++++IT+ ++M L ++ +G+ AR A + +G+A+E E +
Sbjct: 90 SPYLSLVNPERLSLITIMEIMRLQGSSGVADGMKTAR---ALISVGKAVEMEYK------ 140
Query: 262 XXXXXXXXXXXXXEEPDGEFY-HAAIENGKLSDXXXXXXXXXXXXXXXXXXSSLIKQQKM 320
+ G Y HAA +N L D K
Sbjct: 141 AQMIKKLDNVADSKSAGGNLYSHAAYKN--LRD-------------------------KR 173
Query: 321 QQVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVS-QLGGSPPDIRPAFKHT 379
V I+G + W Q R+K+G ++ L+E A ++ + G +++PAF H
Sbjct: 174 LAVSKEIEGEERSLGWSQVTRSKIGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHA 233
Query: 380 FKTAMADSQKDIRRYGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYL 437
++ R G+I +P+V++ L K+ + P +LPMLV P W ++ G YL
Sbjct: 234 YEYLRGS------RLGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYL 287
Query: 438 FLPSYVMRTHGAKQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSG 496
+ + VMR + +Q +K A + Q+E ++ LD L +T W+IN+++ +V+ + W SG
Sbjct: 288 YSKTSVMRFKDSIEQQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSG 347
Query: 497 GRLAD----LVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
RL + D + + + K + HS RC + KL +
Sbjct: 348 ERLGKVPPAMYDGPEPVQPQVEELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEI 407
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
AR ++ FY+PHN+DFRGRAYP+ +LNH+G DLCRG+L FAE +PLG GLRWLKIH
Sbjct: 408 ARAFLNDE-FYFPHNLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIH 466
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEG---RRWWLEAEDPLQCLAACIN 669
+ANLY G DK ++ RV + + HLD ++ +A R L+ + WWLEA DP Q LAA I
Sbjct: 467 IANLY--GYDKANFDDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIE 524
Query: 670 LSEALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIA 729
L +AL S PE S +PVH DG+CNGLQHYAALG D GA VNL D+P+DVYS +
Sbjct: 525 LHDALESGNPEAFESSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVG 584
Query: 730 SRVLEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 789
+ V E + KD E S ++ RK+VKQTVMT+VYGVT++GAR+QI+++L
Sbjct: 585 AMVEEAIAKDCE------SGDKYALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQL 638
Query: 790 KERCAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVR---- 845
K+R I ++ E +SA+ Y A+ L + +F+ A+SI +WL A+++A + R
Sbjct: 639 KDRKDIPEE-ECWSAAAYLARLVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPEL 697
Query: 846 --------------------------WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--R 877
WTTP+GLP VQPYR+I R I T++Q + +
Sbjct: 698 MAEAAAVKKGQLPMNRLKKEQMTSVIWTTPLGLPIVQPYRKIARKQIDTAIQTVYISDPN 757
Query: 878 ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNR 937
+V +Q++AFPPN++HSLD +HMM+TA+ C+K L FA VHDSYWTHA D+DEM+
Sbjct: 758 RLAEVNSAKQASAFPPNYIHSLDATHMMLTALECRKKNLTFASVHDSYWTHAADIDEMSS 817
Query: 938 ILREKFVELYEAPILENLLESFQKSFPKLNFP 969
+R+ F+ L+ + +L L F + + P
Sbjct: 818 TIRDTFIALHSSDVLGQLRREFLQRYHDYKIP 849
>G4Z814_PHYSP (tr|G4Z814) DNA-directed RNA polymerase OS=Phytophthora sojae
(strain P6497) GN=PHYSODRAFT_354222 PE=3 SV=1
Length = 576
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/571 (45%), Positives = 341/571 (59%), Gaps = 45/571 (7%)
Query: 463 QLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXXXXXXXXXI 522
+++ I +AL+ + W IN+ +L+V+ +IW GG DL R DV
Sbjct: 8 KMDGILKALNLMAEVPWVINKEVLEVVLKIWEDGGNFGDLPTRTDVPLPDPDSPEFADDP 67
Query: 523 RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYLN 582
+ R V+ I + N E HS RC+ KL VA + K+E YYP+N+DFRGR YP+ P LN
Sbjct: 68 ALYHRNVRKIEQLNREFHSLRCDTLYKLQVAEEFKDEPELYYPYNMDFRGRVYPIPPNLN 127
Query: 583 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVFD 642
HLGSDL R +L F + +PLG+ GLRW+KIHLAN++ GVDK ++ RV F + +LD V
Sbjct: 128 HLGSDLSRSLLIFRDRKPLGERGLRWMKIHLANVF--GVDKCSFDERVEFADANLDKVVA 185
Query: 643 SADRPL-EGR-RWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHY 700
SA PL EG WW A+ P L C L A+ SP P +S++P+H DGSCNGLQHY
Sbjct: 186 SASNPLGEGDCAWWKGADYPFLALGVCFELRRAIESPDPTKYMSNIPIHQDGSCNGLQHY 245
Query: 701 AALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA-------------------E 741
AALGRD G + VNLV RP+DVY G+A+ V+ + DA +
Sbjct: 246 AALGRDYSGGSQVNLVPAPRPSDVYMGVATEVMAKVENDAALGVPSVEEVRAMLAGVPDD 305
Query: 742 KDPETNSXXXXXXXXXXQ-------------VDRKLVKQTVMTSVYGVTYVGARDQIKRR 788
ET + Q + RK+VKQTVMTSVYGVTY+GAR QI R
Sbjct: 306 DTAETKARRIKLRTLLDQAQRKKCAQFLNGIITRKVVKQTVMTSVYGVTYIGARKQISAR 365
Query: 789 LKE----RCAIED---DSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTN 841
L E + I D + E++ ASCY A+ T+ ++ ++F +AR IM+WLA CA +
Sbjct: 366 LHETFLTKGHIMDEKLEDEIYHASCYCAELTMGSMGDLFNSARGIMAWLAKCAGKAGLSG 425
Query: 842 EPVRWTTPIGLPAVQPYRQIGRSIIKTSLQ-VLSLRRETDKVLVKRQSTAFPPNFVHSLD 900
+P+ W TP+GLP VQPYR ++T +Q VL + + V + RQ +AFPPNFVHSLD
Sbjct: 426 QPMSWITPLGLPVVQPYRSKSTKQVRTKVQHVLMVDNDGQPVSIGRQKSAFPPNFVHSLD 485
Query: 901 GSHMMMTAVAC-KKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESF 959
+HMM+TA C + + FA VHDSYWTHAC VD MNR LRE+FV LYE P+LE+LL
Sbjct: 486 STHMMLTARRCLEDEKISFAAVHDSYWTHACSVDIMNRRLREEFVHLYEQPLLEDLLTEL 545
Query: 960 QKSFPKLNFPPLPERGDFDLREVLNSQYFFN 990
+ FP ++F +P+ GD DLR VL+S YFFN
Sbjct: 546 RLRFPDMDFEDVPQLGDLDLRSVLDSPYFFN 576
>C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr1-4_0022 PE=3 SV=1
Length = 1321
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/662 (40%), Positives = 381/662 (57%), Gaps = 54/662 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI----QSPVS--QLGGSPPDIRPAFKHTFKTAMADSQK 389
W E +AK+G ++ LL+++A I + P++ ++ G P A H ++ A +
Sbjct: 562 WPNEIKAKIGSVLISLLLQSAKIDVQGKDPITNEEVHGQVP----AIFHQYQYANGN--- 614
Query: 390 DIRRYGIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTH 447
+ GI++ T L K + V P YLPMLV P W ++ G Y + + ++RT
Sbjct: 615 ---KIGILKFHHDFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTK 671
Query: 448 GAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VD 504
+ +Q VK A N ++ +++ L LGNT W IN + +VIS++W SG + D+ +
Sbjct: 672 DSPEQLAYVKAASENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQ 731
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ IR WK QV+ + + + S RC+ KL AR E+ Y+
Sbjct: 732 DSPIYPPQPPSDADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGER-IYF 790
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F EG+ LG+ GLRWLKIHLANLY G+DK
Sbjct: 791 PHNLDFRGRAYPISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKE 848
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
+ R FT+ + ++ DSA +PL G+ WW +E P Q L+ CI L+EA + P +S
Sbjct: 849 TLDKREQFTDLNKANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVS 908
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DG+CNGLQHYAALG D GA VNL+ ++P DVYS +A V + + DA
Sbjct: 909 HIPVHQDGTCNGLQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDA---- 964
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
TN + RK+VKQTVMTSVYGVTY+GA DQI RRLKE +DD + A
Sbjct: 965 -TNG-HQLALKLQRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKEIFG-DDDPDTHVA 1021
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNE---------------------P 843
Y A +++ E+F A I WLA+ +K I +
Sbjct: 1022 GRYLALQVFSSIRELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLAS 1081
Query: 844 VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDG 901
V WT+P+GLP VQPYR IG+ + T+LQ + + V ++Q+ AFPPN++HSLD
Sbjct: 1082 VIWTSPLGLPIVQPYRSIGKKQVATNLQTVFISDPHAVSPVDSRKQTNAFPPNYIHSLDA 1141
Query: 902 SHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQK 961
SHM+++++ C + L FA VHDSYWTHA DVD MN ILR+ FV+L+E ++++L + F +
Sbjct: 1142 SHMLLSSIECGQRRLSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFDR 1201
Query: 962 SF 963
+
Sbjct: 1202 RY 1203
>Q3U3J3_MOUSE (tr|Q3U3J3) DNA-directed RNA polymerase OS=Mus musculus GN=Polrmt
PE=2 SV=1
Length = 1207
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/688 (38%), Positives = 386/688 (56%), Gaps = 47/688 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ +LL++ + ++ G+ I P H + S + R+
Sbjct: 536 QPWSVPVLLQLGKQLAELLVQAVQMPRSLAARQGAQRSI-PVLYHVY------SFRSYRQ 588
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGA 449
GI++ P T LE +A+ + +PML PP WT GAYL + +MR T G
Sbjct: 589 VGILKPHPAFTHLLETAAEPTLTFETTEVPMLCPPLPWTSLHSGAYLLSSTKLMRATEGT 648
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD--RDD 507
Q +++ P QL +AL LGN WR+N LLD++ QI+ G + V R +
Sbjct: 649 TQHQRLLEQCPPAQLHGPLDALTQLGNCAWRVNGHLLDLVLQIFRDKGCMPLGVPPPRSE 708
Query: 508 VXXXXXXXX---XXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ ++++ +K E HS R E +L++A+ ++ + F+
Sbjct: 709 APRPARYQLPPGSTPVHKSELRKELARCLKVAREMHSLRSEALYRLSLAQHLRH-RVFWL 767
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFAEGRPLG GL WLKIHL NL G
Sbjct: 768 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPRGLDWLKIHLINL-TGLKKGD 826
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
R+AF + ++++ DSAD PL GR+WW+EA++P Q LA C+ ++ A+RSP P IS
Sbjct: 827 SLRMRLAFADEVMEEILDSADNPLTGRKWWMEADEPWQTLACCMEVAHAVRSPDPAAYIS 886
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DGSCNGLQHYAALGRD +GAA+VNL D P DVY +A++V E ++DA++
Sbjct: 887 HLPVHQDGSCNGLQHYAALGRDSVGAASVNLTPSDLPQDVYREVATQVEEFRQQDAKEGL 946
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ RK+VKQTVMT VYGVT G R QI++RL+E + ++ A
Sbjct: 947 RVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VWEA 999
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF + R+I WL + A +I+ PV W TP+G+P +QPY + +
Sbjct: 1000 SHYLVRQVFKSLQEMFTSTRAIQHWLTESANLISHAGWPVEWVTPLGIPIIQPYHRESKV 1059
Query: 865 IIKTSLQVLSLRR---ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+K LQ ++L E+ K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1060 QVKGGLQSITLTSSVDESQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLIFVSV 1119
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPKLN-------------- 967
HD +WTHA D+ MN + RE+FV L+ PILE+L + +K F ++
Sbjct: 1120 HDCFWTHAADIPTMNEVCREQFVRLHSQPILEDLAKFLKKRFCSVSSIKSLKSSERALVT 1179
Query: 968 -----FPPLPERGDFDLREVLNSQYFFN 990
LP+ G FDL +V+ S YFF+
Sbjct: 1180 KLQETLQSLPKTGTFDLGQVIRSTYFFS 1207
>F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430
/ Wegner 21-1) GN=PP7435_Chr1-0797 PE=3 SV=1
Length = 1329
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/662 (40%), Positives = 381/662 (57%), Gaps = 54/662 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI----QSPVS--QLGGSPPDIRPAFKHTFKTAMADSQK 389
W E +AK+G ++ LL+++A I + P++ ++ G P A H ++ A +
Sbjct: 570 WPNEIKAKIGSVLISLLLQSAKIDVQGKDPITNEEVHGQVP----AIFHQYQYANGN--- 622
Query: 390 DIRRYGIIECDPLVTKGLEK-SAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTH 447
+ GI++ T L K + V P YLPMLV P W ++ G Y + + ++RT
Sbjct: 623 ---KIGILKFHHDFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTK 679
Query: 448 GAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--VD 504
+ +Q VK A N ++ +++ L LGNT W IN + +VIS++W SG + D+ +
Sbjct: 680 DSPEQLAYVKAASENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQ 739
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ IR WK QV+ + + + S RC+ KL AR E+ Y+
Sbjct: 740 DSPIYPPQPPSDADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGER-IYF 798
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGRAYP+ P+LNHLG+D+ RG+L F EG+ LG+ GLRWLKIHLANLY G+DK
Sbjct: 799 PHNLDFRGRAYPISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKE 856
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
+ R FT+ + ++ DSA +PL G+ WW +E P Q L+ CI L+EA + P +S
Sbjct: 857 TLDKREQFTDLNKANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVS 916
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DG+CNGLQHYAALG D GA VNL+ ++P DVYS +A V + + DA
Sbjct: 917 HIPVHQDGTCNGLQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDA---- 972
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
TN + RK+VKQTVMTSVYGVTY+GA DQI RRLKE +DD + A
Sbjct: 973 -TNG-HQLALKLQRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKEIFG-DDDPDTHVA 1029
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNE---------------------P 843
Y A +++ E+F A I WLA+ +K I +
Sbjct: 1030 GRYLALQVFSSIRELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLAS 1089
Query: 844 VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVHSLDG 901
V WT+P+GLP VQPYR IG+ + T+LQ + + V ++Q+ AFPPN++HSLD
Sbjct: 1090 VIWTSPLGLPIVQPYRSIGKKQVATNLQTVFISDPHAVSPVDSRKQTNAFPPNYIHSLDA 1149
Query: 902 SHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQK 961
SHM+++++ C + L FA VHDSYWTHA DVD MN ILR+ FV+L+E ++++L + F +
Sbjct: 1150 SHMLLSSIECGQRRLSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFDR 1209
Query: 962 SF 963
+
Sbjct: 1210 RY 1211
>G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavia terrestris
(strain ATCC 38088 / NRRL 8126) GN=THITE_2114671 PE=3
SV=1
Length = 1408
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/682 (39%), Positives = 378/682 (55%), Gaps = 74/682 (10%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W RAK G ++ LI++A I + PD + PAF HT +
Sbjct: 561 WPTVIRAKFGAVLLGALIDSAKIV-----VNREHPDTKQMVTQSMPAFIHTVQL------ 609
Query: 389 KDIRRYGIIECDPLVTKGLEKSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMR-- 445
K R+ G+I+ + + +++ + + +LPM+V P W+R+DKG ++ PS ++R
Sbjct: 610 KKGRKVGVIQPNRALVDLMKREPRGEALARHLPMVVEPVPWSRFDKGGFIGSPSPLIRLK 669
Query: 446 THGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDR 505
H +Q+ A +E + LD LG T WRIN+ + DV+ + W SG A+
Sbjct: 670 NHEKEQRFYAEAAIERGDMEQMMRGLDVLGKTAWRINRPVFDVMLEAWNSGEEFANFPAL 729
Query: 506 DDVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D +++ W R VK E + HS RC I +L +AR +++ FY
Sbjct: 730 DPKIPIPPEPDSTDDPMKRRLWVRAVKAAENEKSGLHSVRCFINFQLEIARAFRDQT-FY 788
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PHN+DFRGRAYP+ YLNH+G+D RG+L FA+G+PLGK+GLRWLK+HL+N+Y G DK
Sbjct: 789 FPHNLDFRGRAYPLPTYLNHMGADHMRGLLIFAKGKPLGKNGLRWLKVHLSNVY--GFDK 846
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ R F +L+++FDSAD PL G+RWWL AEDP QCLAAC L AL SP P +
Sbjct: 847 ASLQEREDFANQNLENIFDSADNPLTGKRWWLGAEDPWQCLAACFELKAALSSPDPAAFV 906
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH PVH DG+CNGLQHYAALG D GA VNL+ GDRPADVY+ +A V E + KD
Sbjct: 907 SHFPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVYAAVAELVQEQVAKD---- 962
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELF 802
+ +++RK+VKQTVMT+VYGVT+VGA+ Q++++L IE ++ +
Sbjct: 963 --VAAGNNFAKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQVQKQLDALYPDIEKETGIS 1020
Query: 803 SA--SCYAAKTTLTALEEMFEAARSIMSWLADCA-------------KVIASTNEPVR-- 845
SA Y A AL MF A I +WL + ++ S+ E V
Sbjct: 1021 SAILGSYIASKVFVALSTMFRGAHDIQNWLGEIGGRVCRAVTPEQLDRLAESSGEKVVRR 1080
Query: 846 ----------------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDK 881
WTTP+ +P VQPYR+ G +I T LQ +L+ D
Sbjct: 1081 KTVKTERSTEDELASQFRNTLVWTTPLRMPVVQPYRKSGTRLISTCLQDLILTSTERDDP 1140
Query: 882 VLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILRE 941
V ++Q AFPPNF+HSLD SHMM++A+ C GL FA VHDS+WTHA DVD MN ++R+
Sbjct: 1141 VNRRKQLQAFPPNFIHSLDASHMMLSALECNDMGLTFAAVHDSFWTHAADVDAMNTVIRD 1200
Query: 942 KFVELYEAPILENLLESFQKSF 963
F+ ++ ++ L F+ +
Sbjct: 1201 SFIRIHREDVIGRLKAEFEARY 1222
>H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur garnettii
GN=POLRMT PE=3 SV=1
Length = 1234
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/688 (38%), Positives = 388/688 (56%), Gaps = 47/688 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ ++L++ + ++ GS I P H + S + R+
Sbjct: 563 QPWPVPVLLQLGRQLAEILVQAVQMPGSLAAPQGSCRLI-PVLYHVY------SFRSYRQ 615
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGA 449
GI++ P + L K+A+ + +PML PP WT GA+L P+ +MR G
Sbjct: 616 IGILKPHPAFVQLLAKAAEPTLTFETVDVPMLCPPLPWTSPHSGAFLLSPTKLMRAVEGT 675
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVD---RD 506
Q ++R P +L +AL LGN WR+N R+LD++ +++ G V +
Sbjct: 676 TQHQRLLERCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFRGKGCSHLGVPPPASE 735
Query: 507 DVXXXXXXXXXXXXXIRK--WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
RK +R++ +K E HS R + +L++A+ ++ F+
Sbjct: 736 APRPPEGHLPPDAPPARKAELRRELARCLKVAREMHSLRADALYRLSLAQHLRHHI-FWL 794
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFAEGRPLG GL WLKIHLANL G +
Sbjct: 795 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPHGLDWLKIHLANL-TGLKKRA 853
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
R+AF + +DD+ DSAD+P+ GR+WW+ A++P Q LA C+ ++ A+R+P P T +S
Sbjct: 854 SLHERLAFADEVMDDILDSADQPMMGRKWWMGADEPWQALACCMEIARAVRTPNPATYVS 913
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V R+DA++
Sbjct: 914 HLPVHQDGSCNGLQHYAALGRDSVGAASVNLMPLDLPQDVYSGVAAQVEIFRRQDAKEGL 973
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ + RK+VKQTVMT VYGVT G R QI++RL+E + ++ A
Sbjct: 974 QVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VWEA 1026
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF R+I WL + A++I++ V W TP+G+P VQPY Q +
Sbjct: 1027 SHYLVRQVFHSLQEMFSGTRAIQHWLTESARLISNAGSAVEWVTPLGIPIVQPYHQDSKV 1086
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
++K +Q ++ D K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1087 LVKGGIQSITCNSGKDSSQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV 1146
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF---PKLNFPPL------- 971
HD +WTHA DV MN++ RE+F+ L+ PIL++L K F P L L
Sbjct: 1147 HDCFWTHAADVPVMNQVCREQFIHLHSQPILQDLSRFLVKRFCSSPSLQHQSLVQRVQIT 1206
Query: 972 ---------PERGDFDLREVLNSQYFFN 990
PE G FDL +V S YFF+
Sbjct: 1207 KLMEMLQSVPETGAFDLEQVKQSTYFFS 1234
>C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_07902 PE=3 SV=1
Length = 1375
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/666 (38%), Positives = 377/666 (56%), Gaps = 56/666 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR----PAFKHTFKTAMADSQKDI 391
W K+G + +L TA I P S ++R PAF+H ++ +
Sbjct: 547 WPTSTEIKIGALLSSMLFSTAEI--PTSHKDPVTEEVRYVNEPAFQHVYQLQKGHN---- 600
Query: 392 RRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK 450
G ++ V + L K + N++ +LPM+ PP W +G +L P V+RT
Sbjct: 601 --VGYVQLHEKVVERLRKEPSGNLLAKHLPMVSPPRPWVSNTQGGFLTQPVQVVRTRHDD 658
Query: 451 QQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRD-DV 508
Q + ++ A LE +++ L LG T W+IN+ + DV+ + W SG +A++V + ++
Sbjct: 659 AQNQYLQAASERGDLEELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNI 718
Query: 509 XXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNV 568
++ + R + HSQRC + ++ +AR E FY PHN+
Sbjct: 719 TEPEKPDADDREAVKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNM 777
Query: 569 DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYES 628
DFRGRAYP+ PY N +G+D CRG+L F+EGR LG+SGLRWL+IHL+N++ G DK ++
Sbjct: 778 DFRGRAYPLPPYFNQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQE 835
Query: 629 RVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPV 688
R F+ +H+DD+ DSA+ L+GRRWWL+A DP QCLAAC+ L AL P P +SH+PV
Sbjct: 836 REQFSIDHVDDILDSANNGLKGRRWWLKAADPFQCLAACVELKNALSLPDPTKYVSHLPV 895
Query: 689 HMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK-DPETN 747
H DGSCNGLQHYAALG D +GA VNL GDRP+D+Y+ +A V + DA+ DP
Sbjct: 896 HQDGSCNGLQHYAALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP--- 952
Query: 748 SXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSASC 806
++ RK+VKQTVMT+VYGVT++GA Q++R+L++ + + E+ +
Sbjct: 953 ----IAKLMDGKITRKVVKQTVMTNVYGVTFIGATRQVRRQLEDHYPELAETDEISKCAV 1008
Query: 807 YAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------------------- 840
+ ++ +AL MF A I WL DCA I +
Sbjct: 1009 HVSRAIFSALNSMFSGAHDIQFWLGDCANRITRSLNPSQIEEIRKELEAPSKTDIAKKLK 1068
Query: 841 -NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVLVKRQSTAFPPNFVH 897
N V WTTP+ LP VQPYR+ I TSLQ+ +++ R ++V ++Q AFPPNF+H
Sbjct: 1069 FNNSVIWTTPLKLPVVQPYREAKTRQIPTSLQLCTIKDIRGANEVNRRKQLQAFPPNFIH 1128
Query: 898 SLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLE 957
SLD +HMM++A+ C + GL F+ VHDS+WTHA D+D+MNR+LR+ FV ++ I+ L
Sbjct: 1129 SLDATHMMLSAIKCDELGLSFSAVHDSFWTHAGDIDKMNRVLRDAFVRMHSDDIVGRLAA 1188
Query: 958 SFQKSF 963
+ +
Sbjct: 1189 ELKARY 1194
>G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_003940 PE=3 SV=1
Length = 1317
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/658 (39%), Positives = 382/658 (58%), Gaps = 48/658 (7%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVS----QLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W AKVG + LLI A + PV G + ++PAF HT++
Sbjct: 559 WDYPIYAKVGSVLASLLIHVAKV--PVKGTDPTTGKTVRGMQPAFHHTYQFFQG------ 610
Query: 392 RRYGIIECDPLVTKGLEKSA-KNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGA 449
++ G+++ + + L + N V P LPMLVPP W Y+ G YLF + ++R +
Sbjct: 611 QKLGVLKVHKSLVRQLAGNELGNSVQPQLLPMLVPPRPWRSYNDGGYLFSQNNIVRIKDS 670
Query: 450 KQQCEAVKRAP-YNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL---VDR 505
+ ++ A N L+PI++ L+ LGNT W +N+++ DVIS++W +G D+ ++
Sbjct: 671 AETTAYLRAASDMNNLDPIYDGLNVLGNTAWTVNRKVFDVISKVWNTGEEYLDIPPIIEE 730
Query: 506 DDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYP 565
D+ ++R+V+ + + SQRC+ KL +AR EK ++P
Sbjct: 731 PDLPSPLPLNAEPSEKA-DYQRRVRKAVNDAASARSQRCDTNYKLEIARGFIGEK-LFFP 788
Query: 566 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLC 625
HNVDFRGRAYP+ P+ NHLG+D+ R + F +G+ LG+ GLRWLKIHLAN+Y GVDK
Sbjct: 789 HNVDFRGRAYPISPHFNHLGNDMTRSLFLFWDGKKLGEQGLRWLKIHLANVY--GVDKAP 846
Query: 626 YESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISH 685
+ RV F E++LD++FDSA PL+GR+WW + + P Q L+ C LSEA + P +SH
Sbjct: 847 LDERVKFVEDNLDNIFDSAKNPLDGRKWWEKGDKPWQVLSVCFELSEAYKLDDPTEYVSH 906
Query: 686 VPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPE 745
+PVH DG+CNGLQHYAALG D GA VNL+ +RP DVY +A V + + +AEK
Sbjct: 907 IPVHQDGTCNGLQHYAALGGDIEGARQVNLIPAERPQDVYKFVAGLVQKRVDAEAEK--- 963
Query: 746 TNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSAS 805
++ RK+VKQTVMT+VYGVT+VGA QI++++ +D ++ S
Sbjct: 964 ---GNKYAIFLRDKITRKVVKQTVMTNVYGVTFVGAVLQIQKQIDHHFGKDDSDKVEEYS 1020
Query: 806 CYAAKTTLTALEEMFEAARSIMSWLADCAKVIA-------------STNEP-----VRWT 847
Y ++ E+F A I WL + A+ I+ ++N+P V WT
Sbjct: 1021 RYLTNHVFDSMRELFLGAHLIQDWLGESARRISKSVRIDYEEKASVNSNKPRHLSSVIWT 1080
Query: 848 TPIGLPAVQPYRQIGRSIIKTSLQ--VLSLRRETDKVLVKRQSTAFPPNFVHSLDGSHMM 905
TP+GLP VQPYR + II T+LQ V+S +V ++Q AFPPNFVHSLD +HM+
Sbjct: 1081 TPLGLPCVQPYRVTKKQIISTNLQDIVISDPFGASQVDARKQQAAFPPNFVHSLDATHML 1140
Query: 906 MTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
MTA AC K GL FA VHDSYWTHA +V +MN +R++FV+L+E ++ + + F+K +
Sbjct: 1141 MTAAACGKDGLSFASVHDSYWTHAANVPKMNAHIRDQFVKLHEENLIIKIRDEFEKRY 1198
>L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis davidii
GN=MDA_GLEAN10011467 PE=3 SV=1
Length = 1219
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/694 (38%), Positives = 393/694 (56%), Gaps = 42/694 (6%)
Query: 322 QVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFK 381
+ +G + D +PW ++G ++ ++L++T + S ++Q + I P H +
Sbjct: 543 EALGTTEASQD-QPWPLTVVVQLGKQLAEVLVQTVKMPSNLAQQQDTQKLI-PVLYHVY- 599
Query: 382 TAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLF 438
S + R+ GI++ P + E +A+ + +PML PP WT GA+L
Sbjct: 600 -----SFQSFRQIGILKPHPAFIQLQETAAERTMTFESAEVPMLCPPLPWTSPHSGAFLL 654
Query: 439 LPSYVMRT-HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG 497
P+ +MR+ G Q ++ P +L +AL LGN WR+N R+LD++ I+ + G
Sbjct: 655 SPTKLMRSLEGTIQHQRLLEGCPPTELHGALDALTQLGNCAWRVNGRVLDLVLTIFNAKG 714
Query: 498 --RLADLVDRDDVXXXXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAV 552
RL + + +R++ +K E HS R + +L++
Sbjct: 715 CPRLGVPSPASEAPRPSKHRLPANASPERKTELRRELARCLKVAREMHSLRTDALYRLSL 774
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
A+ ++ + F+ PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIH
Sbjct: 775 AQHLRH-RVFWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLNWLKIH 833
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
L NL G + ++R+AF + +DD+ DSAD+P+ GR+WW+EA++P Q LA C+ +++
Sbjct: 834 LVNL-TGLKKRESLQARLAFADEIMDDILDSADQPMTGRKWWMEADEPWQALACCMEIAK 892
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
A+R+P P +SH PVH DGSCNGLQHYAALGRD +GAA+VNLV D P DVYS +A++V
Sbjct: 893 AVRAPNPAAYVSHFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDVPQDVYSSVAAQV 952
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
R+DAE+ + + + RK+VKQTVMT VYGVT G R QI++RL+E
Sbjct: 953 EVFRRQDAERGVQVATVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLREL 1006
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
+ ++ AS Y + +L+EMF + R+I WL + A++IA + V W TP+G+
Sbjct: 1007 SDFPQEF-VWQASHYLVRQVFNSLQEMFSSTRAIQRWLTESARLIARSGLAVEWVTPLGI 1065
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
P +QPY + I +Q L+ D K +Q FPPNF+HSLD SHMM+TA+
Sbjct: 1066 PIIQPYHHDSKVSISGGIQSLTFCSSGDTNQKPNTLKQKNGFPPNFIHSLDSSHMMLTAL 1125
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLL-----------ES 958
C + GL F VHD +WTHA DV MN++ RE+FV L+ PIL +L S
Sbjct: 1126 HCYRKGLTFVSVHDCFWTHAADVAIMNQVCREQFVRLHSQPILHDLSRFLVERYCSGPRS 1185
Query: 959 FQKSFPKLN--FPPLPERGDFDLREVLNSQYFFN 990
KL +P+ G FDL +V +S YFF+
Sbjct: 1186 TNAQVVKLQEMLLSVPKTGTFDLDQVKHSTYFFS 1219
>L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_14389 PE=3
SV=1
Length = 1383
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/680 (39%), Positives = 376/680 (55%), Gaps = 76/680 (11%)
Query: 335 PWGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKD 390
PW + K+G ++ L+ETA I + PV+Q +PAF H + K
Sbjct: 541 PWPVAVKVKLGAMLLTALLETAKIKVVQEQPVTQTLIH--QYQPAFSHALRL------KR 592
Query: 391 IRRYGIIECD-PLVTKGLEKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HG 448
++ G+I + LVT + + + +LPM+VPP WT ++KG +L S V+R G
Sbjct: 593 GKKIGMILLNKTLVTIMKSEPRGDYLAKHLPMVVPPEPWTDFNKGGFLESSSAVVRVKQG 652
Query: 449 AKQQC----EAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL-- 502
K+Q A+ R +Q +F+ LD LG T WRIN + +V+ + W +G A+
Sbjct: 653 DKEQKLYAEAAITRGDMDQ---VFKGLDILGKTAWRINTPVFNVMLEAWNTGKAFANFPE 709
Query: 503 VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGF 562
+ D R W R VK I + HSQRC + +L +AR + + F
Sbjct: 710 LSPDIAYPPEPELSDDPMARRNWIRTVKAIENKKGALHSQRCFMNFQLEIARAFRNQ-SF 768
Query: 563 YYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 622
Y+PHNVDFRGRAYP+ YLNH+G+D RG+L FA+G+ LG+ GL+WLK+HLAN+Y G D
Sbjct: 769 YFPHNVDFRGRAYPLPTYLNHMGADHVRGLLRFAKGKELGERGLQWLKVHLANVY--GFD 826
Query: 623 KLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETT 682
K + R +F +L ++FDSA+ PL G WWL+AEDP QCLA C L AL SP P
Sbjct: 827 KASLKDRESFAMENLVNIFDSANNPLTGNMWWLKAEDPWQCLATCYELKAALESPEPTKY 886
Query: 683 ISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAE- 741
+SH+PVH DG+CNGLQHYAALG D GA VNL D+PADVYS +A+ V + + KD E
Sbjct: 887 VSHLPVHQDGTCNGLQHYAALGGDTWGAEQVNLAPSDKPADVYSAVANIVKDHIAKDVEV 946
Query: 742 KDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRR-------LKERCA 794
K P ++ RK+VKQTVMT+VYGVT+ GAR QI ++ L+E
Sbjct: 947 KHP-------IAMGLNGKITRKVVKQTVMTNVYGVTFAGARKQICKQLDALYPELREETG 999
Query: 795 IEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEP----------- 843
+ + +++ Y A AL MF+ A I WL + + P
Sbjct: 1000 VNN----LTSATYIAGLVFKALSTMFKGAHDIQYWLGEIGGRVCKAVTPEQIELISQDGL 1055
Query: 844 ------------------VRWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLR--RETDKVL 883
+ WTTP+ +P QPYR+ G II T+LQ +S +D V
Sbjct: 1056 SEASKVSRSDMLSQFRATIVWTTPLRMPVAQPYRKHGTRIIHTALQDMSFTVPERSDPVH 1115
Query: 884 VKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKF 943
K+Q AFPPNF+HSLD +HM+++A+ C + GLDFA VHDS+WTHA DVD MNR+LR+ F
Sbjct: 1116 AKKQLQAFPPNFIHSLDATHMLLSALECNELGLDFAAVHDSFWTHAADVDSMNRVLRDAF 1175
Query: 944 VELYEAPILENLLESFQKSF 963
+ ++E ++ L F+ +
Sbjct: 1176 IRIHEEDVVGRLATEFEARY 1195
>G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis lucifugus PE=3 SV=1
Length = 1219
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/694 (38%), Positives = 391/694 (56%), Gaps = 42/694 (6%)
Query: 322 QVMGIIKGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFK 381
+ +G + D +PW ++G ++ ++L++T + S ++Q + I P H +
Sbjct: 543 EALGTTEASQD-QPWPLTVVVQLGKQLAEVLVQTVKMPSNLAQQQDTQKLI-PVLYHVY- 599
Query: 382 TAMADSQKDIRRYGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLF 438
S + R+ GI++ P + E +A+ + +PML PP WT GA+L
Sbjct: 600 -----SFQSFRQIGILKPHPAFIQLQETAAERTMTFESAEVPMLCPPLPWTSPHSGAFLL 654
Query: 439 LPSYVMRT-HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG 497
P+ +MR+ G Q ++ P +L +AL LGN WR+N R+LD++ I+ + G
Sbjct: 655 SPTKLMRSLEGTIQHQRLLEGCPPTELHGALDALTQLGNCAWRVNGRVLDLVLTIFNAKG 714
Query: 498 --RLADLVDRDDVXXXXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAV 552
RL + + +R++ +K E HS R + +L++
Sbjct: 715 CPRLGVPSPASEAPRPSKHRLPANASPERKTELRRELARCLKVAREMHSLRTDALYRLSL 774
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
A+ ++ + F+ PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIH
Sbjct: 775 AQHLRH-RVFWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLNWLKIH 833
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
L NL G + ++R+AF + +DD+ DSAD+P+ GR+WW+EA++P Q LA C+ ++
Sbjct: 834 LVNL-TGLKKRESLQARLAFADEIMDDILDSADQPMTGRKWWMEADEPWQALACCMEIAR 892
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
A+R+P P ISH PVH DGSCNGLQHYAALGRD +GAA+VNLV D P DVYS +A++V
Sbjct: 893 AVRAPNPAAYISHFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDVPQDVYSSVAAQV 952
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
R+DAE+ + + RK+VKQTVMT VYGVT G R QI++RL+E
Sbjct: 953 EVFRRQDAERGVQVAKVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLREL 1006
Query: 793 CAIEDDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGL 852
+ ++ AS Y + +L+EMF + R+I WL + A++IA + V W TP+G+
Sbjct: 1007 SDFPQEF-VWQASHYLVRQVFNSLQEMFSSTRAIQRWLTESARLIARSGLAVEWVTPLGI 1065
Query: 853 PAVQPYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAV 909
P +QPY + I +Q L+ D K +Q FPPNF+HSLD SHMM+TA+
Sbjct: 1066 PIIQPYHHDSKVSISGGIQSLTFCSSGDTNQKPNTLKQKNGFPPNFIHSLDSSHMMLTAL 1125
Query: 910 ACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLL-----------ES 958
C + GL F VHD +WTHA DV MN++ RE+FV L+ PIL +L S
Sbjct: 1126 HCYRKGLTFVSVHDCFWTHAADVAIMNQVCREQFVRLHSQPILHDLSRFLVERYCSGPRS 1185
Query: 959 FQKSFPKLN--FPPLPERGDFDLREVLNSQYFFN 990
KL +P+ G FDL +V +S YFF+
Sbjct: 1186 TNAQVAKLQEMLLSVPKTGTFDLDQVKHSTYFFS 1219
>G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2310823 PE=3 SV=1
Length = 1402
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/687 (38%), Positives = 386/687 (56%), Gaps = 76/687 (11%)
Query: 336 WGQEARAKVGCRVMQLLIETAYI----QSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDI 391
W +AK G ++ L++TA I + P ++ + ++PAF HT + K
Sbjct: 552 WPIAIKAKFGAVILGALMDTAKIVVEREHPETKEKVT--QVQPAFTHTVQL------KKG 603
Query: 392 RRYGIIECDPLVTKGLEKSAKNMVIP-YLPMLVPPNNWTRYDKGAYLFLPSYVMR--THG 448
RR G+I+ + + + +++ + + +LPM+V P W+++DKG ++ PS ++R H
Sbjct: 604 RRVGVIQPNRSLIELMKREPRGEALARHLPMVVEPEPWSKFDKGGFITSPSPLVRLKNHE 663
Query: 449 AKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDV 508
Q+ A +E + LD LG T W+IN+ + DV+ + W +G A+L D
Sbjct: 664 KDQRIYAEAAIERGDMEQMMRGLDVLGKTAWKINRPVFDVMLEAWNTGEEFANLPALDPK 723
Query: 509 XXXXXXXXXXXXXIRK--WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPH 566
+++ W R VK E + HS RC + +L +AR +++ FY+PH
Sbjct: 724 IPIPPEPDSTDDPMKRRLWLRAVKAAENEKSGLHSVRCFMNFQLEIARAFRDQT-FYFPH 782
Query: 567 NVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCY 626
N+DFRGRAYP+ YLNH+G+D RG+L FA+GRPLGKSGL WLK+HL+N+Y G DK
Sbjct: 783 NIDFRGRAYPIPTYLNHMGADNMRGLLLFAKGRPLGKSGLAWLKVHLSNVY--GFDKASL 840
Query: 627 ESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHV 686
+ R F + +L+++FDSAD PL G+RWWL+AEDP QCLA C L AL SP P +SH+
Sbjct: 841 KEREEFADRNLENIFDSADNPLTGKRWWLQAEDPWQCLATCFELKAALSSPDPTAYVSHL 900
Query: 687 PVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPET 746
PVH DG+CNGLQHYAALG D GA VNL+ GDRPADVYS +A E+++K +D
Sbjct: 901 PVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVYSAVA----ELVQKQVTEDLAN 956
Query: 747 NSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCA-IEDDSELFSA- 804
+ ++ RK+VKQTVMT+VYGVT+VGA+ Q++++L IE ++ L S
Sbjct: 957 GN--EFAQAMDGKITRKVVKQTVMTNVYGVTFVGAKKQVQKQLDSLYPDIEKETGLSSGV 1014
Query: 805 -SCYAAKTTLTALEEMFEAARSIMSWLADCA-------------KVIASTNEPVR----- 845
+ Y A AL MF A I +WL + ++ ++ E V
Sbjct: 1015 LASYIAAKVFMALSTMFRGAHDIQNWLGEIGGRVCRAVTPEQLDRIAEASGEKVGSGEES 1074
Query: 846 ---------------------------WTTPIGLPAVQPYRQIGRSIIKTSLQ--VLSLR 876
WTTP+ +P VQPYR+ G +I T LQ VL+
Sbjct: 1075 KSTKKKAKASSKAGDEDLASHFRNTLVWTTPLRMPVVQPYRKSGTRLISTCLQDLVLTNV 1134
Query: 877 RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMN 936
D V ++Q AFPPNF+HSLD SHMM++A+ C GL FA VHDS+WTHA DVD MN
Sbjct: 1135 DRDDPVNRRKQLQAFPPNFIHSLDASHMMLSALECDAIGLTFAAVHDSFWTHAADVDAMN 1194
Query: 937 RILREKFVELYEAPILENLLESFQKSF 963
R++R+ F+ +++ ++ L F+ +
Sbjct: 1195 RVIRDAFIRIHQEDVIGRLKSEFEARY 1221
>J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=1
Length = 1414
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/634 (40%), Positives = 369/634 (58%), Gaps = 28/634 (4%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G R+ +LL+ET I ++ G+ I P H + S + R+
Sbjct: 552 QPWPLPVLVELGKRLAELLVETVRIPGSLAAPQGACTLI-PVLYHVY------SFRSFRQ 604
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
GI++ P T+ L +A++ +I +PML PP WT GA+L P+ +MR+ G
Sbjct: 605 IGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLEGT 664
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RL---ADLVD 504
Q + P +L +AL LGN WR+N R+LD++ +++ + G RL A +
Sbjct: 665 MQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPPSE 724
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ +R++ +K E HS R + +L++A+ ++ + F+
Sbjct: 725 APRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLRH-RVFWL 783
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIHL NL G
Sbjct: 784 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKKHE 842
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
++R+ F + +DD+ DSADRP+ GR+WW+E ++P Q LA C+ ++ A+RSP P +S
Sbjct: 843 PLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTAFVS 902
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V R+DA++
Sbjct: 903 HFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQRGV 962
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ RK+VKQTVMT VYGVT G R QI+RRL+E + ++ A
Sbjct: 963 RVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQEF-VWEA 1015
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF R+I WL + A++IA T V W TP+G+P +QPY + +
Sbjct: 1016 SHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRDSKV 1075
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+I +Q L+ D K +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1076 MIGGGIQSLTFSNSGDTTQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV 1135
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENL 955
HD +WTHA DV MN++ RE+FV L+ PIL NL
Sbjct: 1136 HDCFWTHAADVAVMNQVCREQFVHLHSQPILHNL 1169
>G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0C00530 PE=3 SV=1
Length = 1321
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/661 (39%), Positives = 376/661 (56%), Gaps = 56/661 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W Q ARAK+G ++ +LI A + L G P + PAF H ++
Sbjct: 564 WPQAARAKIGSIMISMLIHVAKVD-----LEGIDPVTKQKVHGEAPAFSHGYQYHNGS-- 616
Query: 389 KDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
+ G+++ + L E+ ++ LPMLV P W ++ G Y + S ++R+
Sbjct: 617 ----KLGVLKIHRSLIHQLNGERLVASVQPQLLPMLVKPRPWKSWNSGGYYYTQSSLIRS 672
Query: 447 HGAKQQCEAVKR-APYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--- 502
+ +Q +K + ++ +++ L+ LG T W +N+R+ DV+S++W SG ++
Sbjct: 673 KDSPEQMAYLKAVSNAGAIDTVYQGLNVLGETAWTVNRRVFDVMSEVWNSGKDFLEIPGI 732
Query: 503 VDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGF 562
++ D+ R+WK + K I + + S RC+ KL +AR EK F
Sbjct: 733 QEKLDLLPAPPRESDPSVH-REWKLKNKEIANKFSSNRSVRCDSNYKLEIARAFLGEK-F 790
Query: 563 YYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVD 622
Y+PHN+DFRGRAYP+ P+ NHLG+D+ RG+L F +G+ LG GL+WLK+HL+NL+ G D
Sbjct: 791 YFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKRLGPRGLKWLKVHLSNLF--GFD 848
Query: 623 KLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETT 682
K R+A+ E HL DV SA+ PL G WW++A+ P Q LA CI ++EA + P PE
Sbjct: 849 KAPLADRIAYAEAHLKDVKRSAEDPLAGDGWWMKADKPWQALATCIEINEAYKLPNPEDF 908
Query: 683 ISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEK 742
ISH PVH DG+CNGLQHYAALG D GA VNLV DRP DVY+ +A V + A K
Sbjct: 909 ISHQPVHQDGTCNGLQHYAALGGDIEGATQVNLVPNDRPQDVYAHVAKLVQARLEAAAAK 968
Query: 743 DPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELF 802
E ++ RK+VKQTVMT+VYGVTYVGA QI+++L +D +
Sbjct: 969 GDE------QAETLKDKITRKVVKQTVMTNVYGVTYVGATFQIEKQLSH--IFDDRTYSL 1020
Query: 803 SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NEP-----V 844
S Y K A+ E+F A I WL +CAK I+ + N+P V
Sbjct: 1021 ELSKYLTKHVFAAVRELFHGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1080
Query: 845 RWTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGS 902
WTTP+GLP VQPYR+ + + T+LQ + + + V +RQ FPPNF+HSLD S
Sbjct: 1081 IWTTPLGLPIVQPYREASKKQVTTNLQTVFISDPFSVNPVNARRQKAGFPPNFIHSLDAS 1140
Query: 903 HMMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKS 962
HM+++A AC + GLDFA VHDSYWTHACDVD+MN LRE+F++L+E ++E L F +
Sbjct: 1141 HMLLSAAACGEEGLDFASVHDSYWTHACDVDQMNSCLREQFIKLHEVDLIERLKNEFDER 1200
Query: 963 F 963
+
Sbjct: 1201 Y 1201
>K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus rotundus PE=2
SV=1
Length = 1222
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/682 (38%), Positives = 386/682 (56%), Gaps = 41/682 (6%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ ++L++T + ++Q G+ ++ P H + S + R+
Sbjct: 557 QPWPLAVVVQLGKQLAEVLVQTVKMPGHLAQRQGTH-NLIPVLYHVY------SFRSFRQ 609
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT-HGA 449
GI++ P + LE +A+ + +PML PP WT GA+L P+ +MR+ G
Sbjct: 610 IGILKPHPAFKQLLETAAERTMTFEAAEVPMLCPPLPWTSPHSGAFLLSPTKLMRSVEGT 669
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RLADLVDRDD 507
Q ++ P L + L LGN WR+N R+LD++ ++ G RL +
Sbjct: 670 MQHQRLLESCPPTNLHGALDTLTQLGNCAWRVNGRVLDLVLTLFNKKGCPRLGVPAPASE 729
Query: 508 VXXXXXXXXXXXXXIRK---WKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ +RQ+ +K E HS R + +L++A+ ++ F+
Sbjct: 730 APRPPENRLSTKASPERKVELRRQLARCLKVAREMHSLRTDALYRLSLAQHLRNSV-FWL 788
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIHL NL G +
Sbjct: 789 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKKRE 847
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
++R+AF + ++ + DSAD+P+ G +WW+EA++P Q LA C+ +++A+R+P P +S
Sbjct: 848 SLQARLAFADEMMNKILDSADKPMTGHKWWMEADEPWQALACCMEIAQAVRAPDPAAYVS 907
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H PVH DGSCNGLQHYAALGRD +GAA+VNLV D P DVYS +A++V R+DAE+
Sbjct: 908 HFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDLPQDVYSSVAAQVEVFRRQDAEQGV 967
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ + RK+VKQTVMT VYGVT G R QI++RL+E + ++ A
Sbjct: 968 QVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLREISNFPQEF-VWQA 1020
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + +L+EMF R+I WLA+ A++IA T V W TP+G+P +QPY +
Sbjct: 1021 SHYLVRQVFNSLQEMFSGTRAIQHWLAESARLIAHTGLAVEWVTPLGIPIIQPYHHDSKV 1080
Query: 865 IIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
+I +Q LS D K + +Q FPPNF+HSLD SHMM+TA+ C + GL F V
Sbjct: 1081 LISGGIQSLSFSSTGDTSQKPNILKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV 1140
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF---PKLN----------F 968
HD +WTHA DV MN++ RE+F+ L+ PIL +L + F P+
Sbjct: 1141 HDCFWTHAADVATMNQVCREQFICLHSQPILYDLSRFLVERFCSGPRSTNVRVARLLDML 1200
Query: 969 PPLPERGDFDLREVLNSQYFFN 990
+P+ G F+L +V +S YFF+
Sbjct: 1201 LSVPKTGTFNLEQVKHSTYFFS 1222
>K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssonina brunnea f. sp.
multigermtubi (strain MB_m1) GN=MBM_00814 PE=3 SV=1
Length = 1461
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/689 (38%), Positives = 377/689 (54%), Gaps = 73/689 (10%)
Query: 328 KGLDDWKPWGQEARAKVGCRVMQLLIETAYIQSPVS--QLGGSPPDIRPAFKHTFKTAMA 385
+ L+D + W RAKVG +M LIE A + ++ + G ++PAF H + +
Sbjct: 540 EALED-RQWPLAMRAKVGAFLMSALIEVAKVPVALTHPETGEIVTQMQPAFCHAHQYKLG 598
Query: 386 DSQKDIRRYGIIECDPLVTKGLEKS-AKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVM 444
++ G+I + + L++ +++ +LPMLV P W+ + KG +L PS +M
Sbjct: 599 ------KKVGVIMANKSLVATLKREPVHSLLAKHLPMLVEPEPWSDFSKGGFLAHPSKIM 652
Query: 445 RTHGAKQQCEAVKRAPYNQ--LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL 502
R + A Q + F+ L+ LG T WRINQ++ DV+ + W +G +A++
Sbjct: 653 RVKTGDKDQRYYAEAAIGQGDMTLTFKGLNVLGKTSWRINQQVFDVMLEAWNAGDAIANI 712
Query: 503 VDRDDVXXXXXXXXXXXXXI--RKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEK 560
+ R+W R VK + + HSQRC +L +AR +K E+
Sbjct: 713 PPETPNLKAPPEPEASQDPLERRQWIRAVKNVENHRSGLHSQRCFQNFQLEIARALKHEE 772
Query: 561 GFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGG 620
FY+PHNVDFRGRAYP+ PYLNH+G+D CRG+L F +GR LG+SGLRWLKIH AN++ G
Sbjct: 773 -FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLLIFGKGRELGESGLRWLKIHAANVF--G 829
Query: 621 VDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPE 680
DK R AF H+D +F++A PL G RWWL AEDP Q LAAC+ L A+ SP P
Sbjct: 830 FDKASLSEREAFAMKHMDQMFEAAKNPLGGTRWWLNAEDPWQFLAACMELKNAMESPDPT 889
Query: 681 TTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDA 740
+SH+PVH DG+CNGLQHYAALG D GA VNL DRPADVY+ +A V E + +D
Sbjct: 890 RFVSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPADRPADVYTAVADLVKESIAEDL 949
Query: 741 EKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSE 800
+ +V RK+VKQTVMT+VYGVTY+GA+ Q++R+L ++E
Sbjct: 950 A------NGNQKAKILEGKVTRKVVKQTVMTNVYGVTYIGAKAQVRRQLVAAFPGLPNNE 1003
Query: 801 LF---SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST----------------- 840
+ S + Y A +AL MF+ A I WL +CA I++
Sbjct: 1004 VINPNSLAAYVATKIFSALSTMFKGAHDIQFWLGECASRISTCLTAEQLTRLDSEWPRLV 1063
Query: 841 ----------------------------NEPVRWTTPIGLPAVQPYRQIGRSIIKTSLQV 872
V WTTP+ +P VQPYR II T++Q
Sbjct: 1064 SEKAGKGPVTKTTGARYTPATLESLTQFKSSVIWTTPLHMPVVQPYRSSKSRIIVTNMQK 1123
Query: 873 LSLR--RETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGVHDSYWTHAC 930
++L +D V ++Q FPPNF+HSLD +HM+++A+ C K GL FA VHDS+WTHA
Sbjct: 1124 INLSEPHRSDPVNKRKQLQGFPPNFIHSLDATHMLLSALECDKHGLSFAAVHDSFWTHAS 1183
Query: 931 DVDEMNRILREKFVELYEAPILENLLESF 959
DVD+MN LRE F++++ ++ L + F
Sbjct: 1184 DVDKMNTALRECFIKIHSEDVVGRLRDEF 1212
>G1L7Q8_AILME (tr|G1L7Q8) DNA-directed RNA polymerase OS=Ailuropoda melanoleuca
GN=POLRMT PE=3 SV=1
Length = 1235
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/694 (38%), Positives = 389/694 (56%), Gaps = 56/694 (8%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ ++L+E + + GS I P H + S + R+
Sbjct: 561 QPWPLPVLVQLGKKLAEVLVEVVRMPGSLVTPQGSCTLI-PVLYHVY------SFRSFRQ 613
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAK 450
GI++ P T+ L +A++ + +PML PP W GA+L P+ +MR+
Sbjct: 614 IGILKPHPAFTELLAVAAEHTLTFEAAEVPMLCPPLPWMSPHTGAFLLSPTKLMRSLEGT 673
Query: 451 QQCEAV------KRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RL--- 499
Q + + P +L +AL LGN WR+N R+LD++ +++T+ G RL
Sbjct: 674 MQHQRLLPPPPPPPPPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFTAKGCPRLGVP 733
Query: 500 ---ADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKM 556
++ D +R R+V +K E HS R + +L++A+ +
Sbjct: 734 APPSEAPRPPDGRLPPSASSAQKAEVR---REVARCLKVAREMHSLRSDALYRLSLAQHL 790
Query: 557 KEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 616
++ + F+ PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIHL NL
Sbjct: 791 RD-RVFWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL 849
Query: 617 YAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRS 676
G +R+ F + +DD+ DSADRP+ GR+WW+EA++P Q LA C+ ++ A+R+
Sbjct: 850 -TGLKKHEPLRARLLFADEVMDDILDSADRPMTGRKWWMEADEPWQALACCMEIARAVRT 908
Query: 677 PTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIM 736
P +SH PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V
Sbjct: 909 ADPTAYVSHFPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSDLPQDVYSGVAAQVEVFR 968
Query: 737 RKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIE 796
R+DAE+ + RK+VKQTVMT VYGVT G R QI+RRL+E
Sbjct: 969 RQDAERGVRVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFP 1022
Query: 797 DDSELFSASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQ 856
+ ++ AS Y + +L+EMF R+I WL + A++I+ V W TP+G+P +Q
Sbjct: 1023 QEF-VWEASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLISHAGSAVEWVTPLGIPVIQ 1081
Query: 857 PYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKK 913
PY Q + +I +Q L+ + D K +Q FPPNF+HSLD SHMM+TA+ C +
Sbjct: 1082 PYHQDSKVLISGGIQSLTFSQSGDTTQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYR 1141
Query: 914 AGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF------PKLN 967
GL F VHD +WTHA DV+ MN++ RE+FV+L+ PIL NL K F PK +
Sbjct: 1142 KGLTFVSVHDCFWTHAADVEVMNQVCREQFVQLHSQPILHNLSRFLVKRFCSGARSPKHS 1201
Query: 968 -----------FPPLPERGDFDLREVLNSQYFFN 990
+P+ G FDL +V +S YFF+
Sbjct: 1202 KNVWLGKLQDTLKSVPKTGAFDLEQVKHSTYFFS 1235
>G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0G03060 PE=3 SV=2
Length = 1354
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/660 (39%), Positives = 379/660 (57%), Gaps = 54/660 (8%)
Query: 336 WGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQ 388
W Q RA++G ++ LI A I + G P + PAF H+++
Sbjct: 598 WPQAVRAQIGSILISTLIHVAKID-----VEGFDPITKTKVYGEAPAFAHSYQYCNG--- 649
Query: 389 KDIRRYGIIECDPLVTKGL--EKSAKNMVIPYLPMLVPPNNWTRYDKGAYLFLPSYVMRT 446
+ G+I+ + L E+ ++ LPMLV P W + G Y + S ++R+
Sbjct: 650 ---MKLGVIKIHKALINQLNGERLVASVQPQLLPMLVEPREWKNWRSGGYFYTQSTLIRS 706
Query: 447 HGAKQQCEAVKRAPYNQ-LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADL--V 503
+ +Q +K + ++ ++ L++LG T W +N+RL ++IS++W G D+ +
Sbjct: 707 KESPEQLAYLKAVSDKEAIDDVYNGLNALGKTAWTVNKRLFEIISKVWNEGIEFLDIPQI 766
Query: 504 DRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFY 563
D +R+WK Q K I + ++ S RC+ KL +AR EK FY
Sbjct: 767 QYDMQLIPPPPRNSDPSILREWKLQNKEIANKISKNRSIRCDTNYKLEIARAFLGEK-FY 825
Query: 564 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 623
+PHN+DFRGRAYP+ P+ NHLG+DL RG+L F +G+ LG GL WLKIH ANLY G+DK
Sbjct: 826 FPHNLDFRGRAYPLSPHFNHLGNDLSRGLLIFWKGKKLGPDGLSWLKIHCANLY--GMDK 883
Query: 624 LCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTI 683
+ + R+ F E+H++DV D+A+ PL+G+ WW +A+ P Q LA CI L+EAL+ PE I
Sbjct: 884 IPFTERIQFIEDHIEDVKDTAENPLDGKGWWKKADKPWQLLATCIELNEALKLDNPEDFI 943
Query: 684 SHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKD 743
SH PVH DG+CNGLQHYAALG D GA VNL+ +RP DVY +A+ +++K EK
Sbjct: 944 SHQPVHQDGTCNGLQHYAALGGDVEGATQVNLIPNERPQDVYRHVAN----LVKKRLEK- 998
Query: 744 PETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFS 803
+ ++ RK+VKQ VMT+VYGVTYVGA QI+++L E D + F
Sbjct: 999 -AVLAGDKKAELLVDKITRKVVKQPVMTNVYGVTYVGATFQIEKQLSE--YFPDRKQCFD 1055
Query: 804 ASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIAST-------------NEP-----VR 845
S Y + E+F +A I WL +CAK I + N+P V
Sbjct: 1056 LSKYLTFHVFATIRELFHSAHLIQDWLGECAKRITKSIRLDVDGKSFKNGNKPDFMSSVI 1115
Query: 846 WTTPIGLPAVQPYRQIGRSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSH 903
WTTP+GLP VQPYR+ + + T+LQ + + + V +RQ FPPNF+HSLD SH
Sbjct: 1116 WTTPLGLPIVQPYREATKKQVMTNLQTIFISDPFAINGVNARRQKAGFPPNFIHSLDASH 1175
Query: 904 MMMTAVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
M+++A+ CK+ GL+FA VHDSYWTHACDV++M+ LR++F+EL++ ++E L + F + +
Sbjct: 1176 MLLSAIKCKENGLEFASVHDSYWTHACDVNKMSVYLRDEFIELHKVDLIERLKDEFDERY 1235
>K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerhamomyces ciferrii
(strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC
0793 / NRRL Y-1031) GN=BN7_4408 PE=3 SV=1
Length = 1332
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 301/883 (34%), Positives = 454/883 (51%), Gaps = 120/883 (13%)
Query: 136 KRQVKMETEAWEEAAKEYQELLEDICEQKLVPNLPYMKSLFLGWFEPLKSAIVAEQEVCK 195
+RQ +E ++ E A ++++ E+I ++ + + + GWFE + + E E CK
Sbjct: 362 ERQTALENKSIEAAQEKWKHEYEEIKKRGDLGMSKSLNARLWGWFEQMMPLVRDEIERCK 421
Query: 196 K-----------------SHRKMTHAPYFNDLPADKMAVITMHKLMGLLMTNHNGIGCA- 237
S RK +APY L K+ VIT ++ +L N G G +
Sbjct: 422 NVDDIQIKTLKNEAFAQHSERK-KYAPYLRLLDPKKVTVIT---ILEMLKNNSTG-GISE 476
Query: 238 --RVIHAALQIGEAIENEARIXXXXXXXXXXXXXXXXXXEEPDGEFYHAAIENGKLSDXX 295
R A L + +A+E E R + +N KLS+
Sbjct: 477 GMRTARAVLSVSKALELEFRSEQILNTEKN----------------FVKNFDNSKLSNPK 520
Query: 296 XXXXXXXXXXXXXXXXSSLIKQQKMQQVMGIIKGLDDWKP-WGQEARAKVGCRVMQLLIE 354
+K+ M + D K W Q+ + K+G ++ +L+
Sbjct: 521 N------------------LKKYSMSLSNFKNDVISDMKVYWPQDIKVKIGSVLISILMH 562
Query: 355 TAYIQSPVSQLGGSPPDIR-------PAFKHTFKTAMADSQKDIRRYGIIECDPLVTKGL 407
A ++ + G P + PAF H+F+ + GI++ +++ L
Sbjct: 563 VAKVE-----VSGVDPSTKQLVRGEAPAFYHSFQYHNG------AKIGILKIHKVLSSQL 611
Query: 408 EKSAKNMVIPY----LPMLVPPNNWTRYDKGAYLFLPSYVMRTHGAKQQCEAVKRAPYNQ 463
SA +V LPML+ P WT ++ GAY + + ++R + +Q +K A ++
Sbjct: 612 --SADKLVGAVQPQSLPMLIQPRPWTSWNNGAYYYSQNQIIRLRDSPEQLAYIK-ASSDK 668
Query: 464 LEPIFEALDSLGNTKWRINQRLLDVISQIWTSGGRLADLVDRDDVXXXXXX--XXXXXXX 521
L+ +++ L+ LGNT W +N+R+ V+S+IW +G D+ +
Sbjct: 669 LDKVYDGLNVLGNTAWTVNERVFKVMSKIWNTGDEFLDIPKAHESLELPEVPPRSSDPSV 728
Query: 522 IRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYYPHNVDFRGRAYPMHPYL 581
+ +WK +VK + + S RC+ KL +AR EK FY+PHN+DFRGRAYP+ P
Sbjct: 729 LNEWKIKVKALQDKYATDRSTRCDANYKLEIARAFLGEK-FYFPHNLDFRGRAYPISPNF 787
Query: 582 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLCYESRVAFTENHLDDVF 641
NH+GSDL RG+L F +G+ +G+ GLRWLKIHLANL+ G+DK R AF ++++ V
Sbjct: 788 NHMGSDLSRGLLLFWKGKEIGEEGLRWLKIHLANLF--GIDKAPLNEREAFVNDNIELVK 845
Query: 642 DSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTISHVPVHMDGSCNGLQHYA 701
+A+ P+ + WW +A+ P Q LA I+L++AL+ P P ISH PVH DG+CNGLQHYA
Sbjct: 846 RAAEDPMANQEWWTKADKPWQALATIIDLADALKLPDPTKHISHQPVHQDGTCNGLQHYA 905
Query: 702 ALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDPETNSXXXXXXXXXXQVD 761
ALG D GA VNL D+P DVY+ +A V + + A E +
Sbjct: 906 ALGGDVEGATQVNLAPSDKPQDVYTHVAKLVRAKLEEAAANGDEN------ARMLKDNIK 959
Query: 762 RKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSASCYAAKTTLTALEEMFE 821
RK+VKQTVMT+VYGVT VGA +QI ++L+ + ED S + S Y K ++ E+FE
Sbjct: 960 RKVVKQTVMTNVYGVTQVGATNQIHKQLQNVFS-EDQS--YKLSVYLTKVVFASMRELFE 1016
Query: 822 AARSIMSWLADCAKVIA-------------------STNEPVRWTTPIGLPAVQPYRQIG 862
A I WLA CAK+I+ S V WTTP+ LP VQPYR I
Sbjct: 1017 GAHLIQDWLAICAKMISKSVRIDIDSYEEMGPKKKPSFMASVIWTTPLDLPIVQPYRAIV 1076
Query: 863 RSIIKTSLQVLSLRR--ETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAG 920
+ I+T+LQ + ++ E +V ++Q AFPPNF+HSLD SHM+++A +C K GL+FA
Sbjct: 1077 KKQIQTNLQTVFIQDPYELHQVDARKQMAAFPPNFIHSLDASHMLLSASSCSKKGLEFAA 1136
Query: 921 VHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF 963
VHDSYWTHACDV EM+ LRE F+EL++ ++ L + F + +
Sbjct: 1137 VHDSYWTHACDVGEMSESLRETFIELHQVDLIARLKDEFDERY 1179
>I3M2A6_SPETR (tr|I3M2A6) DNA-directed RNA polymerase OS=Spermophilus
tridecemlineatus GN=POLRMT PE=3 SV=1
Length = 1220
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/691 (38%), Positives = 389/691 (56%), Gaps = 52/691 (7%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPDIRPAFKHTFKTAMADSQKDIRR 393
+PW ++G ++ ++L++ ++ ++ GS I P H + S + R+
Sbjct: 548 QPWPLPVLMQLGKQLAEMLVQAVHMPLGLAVPQGSCRPI-PVLYHVY------SFRSYRQ 600
Query: 394 YGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMR-THGA 449
GI++ P T+ L +A + +PML PP WT GA+L P+ +MR G
Sbjct: 601 IGILKPHPAFTQLLVAAADPTLTFETVDVPMLCPPLPWTSPHTGAFLLSPTKLMRAVEGT 660
Query: 450 KQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--RLA---DLVD 504
Q ++R P L + L LGN WR+N R+LD++ +++ G RL +
Sbjct: 661 TQHQRLLERCPPTNLHGALDTLTQLGNCAWRVNGRVLDLVLELFRDKGCSRLGVPPPPSE 720
Query: 505 RDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAVARKMKEEKGFYY 564
+ +R++ +K E HS R + +L++A+ ++ + F+
Sbjct: 721 APRPREGHLPRGASPAHKAELRRELAGCLKVAREMHSLRVDALYRLSLAQHLRH-RIFWL 779
Query: 565 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 624
PHN+DFRGR YP P+ NHLGSDL R +LEFAEGRPLG GL WLKIHL NL G +
Sbjct: 780 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPHGLTWLKIHLVNL-TGLRKRD 838
Query: 625 CYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSEALRSPTPETTIS 684
++R+AF + +D + DSAD+P+ GR+WW+E+E+P Q LA C+ +++A+R+P P IS
Sbjct: 839 SLQARLAFADQMMDHILDSADQPMTGRKWWMESEEPWQTLACCMEVAQAVRAPDPAAYIS 898
Query: 685 HVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRVLEIMRKDAEKDP 744
H+PVH DGSCNGLQHYAALGRD +GAA+VNL+ D P DVYSG+A++V R+DA +
Sbjct: 899 HLPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSDLPQDVYSGVAAQVEVFRRQDAARGV 958
Query: 745 ETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFSA 804
+ RK+VKQTVMT VYGVT G R QI++RL+E + + ++ A
Sbjct: 959 RVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELDSFPQEF-VWDA 1011
Query: 805 SCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPIGLPAVQPYRQIGRS 864
S Y + ++L+EMF + R+I WL + A++I+ V W TP+G+P +QPY +
Sbjct: 1012 SHYLVRQVFSSLQEMFSSTRAIQHWLTESARLISQAGWAVEWVTPLGIPVIQPYHHDSKF 1071
Query: 865 IIKTSLQVL---SLRRETDKVLVKRQSTAFPPNFVHSLDGSHMMMTAVACKKAGLDFAGV 921
++K LQ + S R + K +Q FPPNF+HSLD +HMM+TA+ C + GL F V
Sbjct: 1072 LVKGGLQSITCSSSRDTSQKPNTLKQKNGFPPNFIHSLDSTHMMLTALHCYRKGLTFVSV 1131
Query: 922 HDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF------------------ 963
HD +WTHA DV MN++ RE+FV L+ PIL++L + K F
Sbjct: 1132 HDCFWTHAADVPVMNQVCREQFVRLHSQPILQDLSQFLVKRFCSSPSTRPQSLSQRVLTT 1191
Query: 964 ----PKLNFPPLPERGDFDLREVLNSQYFFN 990
P + P P G FDL +V +S YFF+
Sbjct: 1192 KLAPPGPHSP--PSAGAFDLEQVKHSTYFFS 1220
>M3V845_PIG (tr|M3V845) DNA-directed RNA polymerase OS=Sus scrofa GN=POLRMT PE=2
SV=1
Length = 1219
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/697 (38%), Positives = 388/697 (55%), Gaps = 64/697 (9%)
Query: 334 KPWGQEARAKVGCRVMQLLIETAYIQSPVSQLGGSPPD---IRPAFKHTFKTAMADSQKD 390
+PW ++G R+ ++L++ + S ++ +P D + P H + S +
Sbjct: 547 QPWSLSVLVQLGKRLAEMLVQAVRMPSNLA----TPRDSNTLIPVLYHVY------SFRS 596
Query: 391 IRRYGIIECDPLVTKGLEKSAKNMVI---PYLPMLVPPNNWTRYDKGAYLFLPSYVMRT- 446
R+ GI++ P + LE +A+ + +PML PP WT GA+L P+ +MR+
Sbjct: 597 FRQIGILKPHPAFRQLLETAAEGTLTFESTEVPMLCPPLPWTSPHSGAFLLSPTKMMRSV 656
Query: 447 HGAKQQCEAVKRAPYNQLEPIFEALDSLGNTKWRINQRLLDVISQIWTSGG--------- 497
G +Q ++R +L +AL LGN W++N +LD++ +++ + G
Sbjct: 657 EGTQQHQVLLERCRPAELHGALDALTQLGNCAWQVNGPVLDLVLELFNNKGCPHLGVPAP 716
Query: 498 -----RLADLVDRDDVXXXXXXXXXXXXXIRKWKRQVKTIMKENNERHSQRCEIELKLAV 552
R + D +R R++ +K E HS R E +L++
Sbjct: 717 PLEAPRPPEGRQAPDACLQPNVPPTQKAELR---RELARRLKMAREMHSLRTEALYRLSM 773
Query: 553 ARKMKEEKGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 612
A+ ++ + F+ PHN+DFRGR YP P+ NHLGSDL R +LEFA+GRPLG GL WLKIH
Sbjct: 774 AQHLRG-RIFWLPHNMDFRGRTYPFPPHFNHLGSDLARALLEFAQGRPLGPQGLNWLKIH 832
Query: 613 LANLYAGGVDKLCYESRVAFTENHLDDVFDSADRPLEGRRWWLEAEDPLQCLAACINLSE 672
L NL G ++R + ++D+ DSADRP+ GR+WW+EA++P Q LA C+ ++
Sbjct: 833 LVNL-TGLKKHESLQARRDLADELMEDILDSADRPMTGRKWWMEADEPWQTLACCMEIAR 891
Query: 673 ALRSPTPETTISHVPVHMDGSCNGLQHYAALGRDKLGAAAVNLVRGDRPADVYSGIASRV 732
A+R+P P +SH PVH DGSCNGLQHYAALGRD GAA+VNL+ D P DVYSG+A++V
Sbjct: 892 AVRAPDPTAYVSHFPVHQDGSCNGLQHYAALGRDSAGAASVNLMPSDLPQDVYSGVAAQV 951
Query: 733 LEIMRKDAEKDPETNSXXXXXXXXXXQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 792
R+DAE+ + RK+VKQTVMT VYGVT G R QI+RRL+E
Sbjct: 952 EVFRRQDAEQGMRVAQVLEGF------ISRKVVKQTVMTVVYGVTRYGGRLQIERRLRE- 1004
Query: 793 CAIEDDSELF--SASCYAAKTTLTALEEMFEAARSIMSWLADCAKVIASTNEPVRWTTPI 850
++D + F AS Y + +L+EMF RSI WL D A++IA V W TP+
Sbjct: 1005 --LQDFPQEFVWEASHYLVRQVFNSLQEMFSGTRSIQRWLTDSARLIAHMGSAVEWVTPL 1062
Query: 851 GLPAVQPYRQIGRSIIKTSLQVLSLRRETD---KVLVKRQSTAFPPNFVHSLDGSHMMMT 907
G+P +QPY + + IK LQ LS D K +Q FPPNF+HSLD SHMM+T
Sbjct: 1063 GIPIIQPYHRDSKVTIKGGLQNLSFNSSVDTSQKPNTLKQKNGFPPNFIHSLDSSHMMLT 1122
Query: 908 AVACKKAGLDFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSF---P 964
A+ C + GL F VHD +WTHA DV MN++ RE+FV+L+ PIL +L + F P
Sbjct: 1123 ALHCYRKGLTFVSVHDCFWTHAADVAVMNQVCREQFVQLHSQPILHDLSRFLRNRFCSDP 1182
Query: 965 KLN-----------FPPLPERGDFDLREVLNSQYFFN 990
+ + +P+ G FDL +V +S YFF+
Sbjct: 1183 RASKNIWASRLMDTLLSVPKPGTFDLEQVKHSTYFFS 1219