Miyakogusa Predicted Gene
- Lj2g3v0621780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0621780.1 CUFF.34898.1
(108 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I3RZ73_LOTJA (tr|I3RZ73) Cytochrome b6-f complex iron-sulfur sub... 66 5e-09
Q9SXU4_CICAR (tr|Q9SXU4) Cytochrome b6-f complex iron-sulfur sub... 65 7e-09
K7M2T2_SOYBN (tr|K7M2T2) Uncharacterized protein OS=Glycine max ... 63 3e-08
C6TFS5_SOYBN (tr|C6TFS5) Cytochrome b6-f complex iron-sulfur sub... 62 7e-08
I1M3Y7_SOYBN (tr|I1M3Y7) Cytochrome b6-f complex iron-sulfur sub... 62 8e-08
A8Y7Z9_SOYBN (tr|A8Y7Z9) Cytochrome b6-f complex iron-sulfur sub... 62 8e-08
B7FGU7_MEDTR (tr|B7FGU7) Cytochrome b6-f complex iron-sulfur sub... 61 1e-07
F6GXR5_VITVI (tr|F6GXR5) Cytochrome b6-f complex iron-sulfur sub... 61 1e-07
F6HTI7_VITVI (tr|F6HTI7) Cytochrome b6-f complex iron-sulfur sub... 60 2e-07
C6SXW5_SOYBN (tr|C6SXW5) Cytochrome b6-f complex iron-sulfur sub... 60 2e-07
I1LUB3_SOYBN (tr|I1LUB3) Cytochrome b6-f complex iron-sulfur sub... 60 3e-07
A5BX41_VITVI (tr|A5BX41) Cytochrome b6-f complex iron-sulfur sub... 59 7e-07
Q0D5J7_ORYSJ (tr|Q0D5J7) Cytochrome b6-f complex iron-sulfur sub... 56 5e-06
I1QBI4_ORYGL (tr|I1QBI4) Cytochrome b6-f complex iron-sulfur sub... 56 5e-06
A2YMJ8_ORYSI (tr|A2YMJ8) Cytochrome b6-f complex iron-sulfur sub... 56 5e-06
I1GTJ6_BRADI (tr|I1GTJ6) Cytochrome b6-f complex iron-sulfur sub... 55 7e-06
>I3RZ73_LOTJA (tr|I3RZ73) Cytochrome b6-f complex iron-sulfur subunit OS=Lotus
japonicus PE=2 SV=1
Length = 227
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGSATGGTIAKDAIGN V AE LK HGPGDRTLTQGLK
Sbjct: 95 SGSATGGTIAKDAIGNDVVAEQWLKAHGPGDRTLTQGLK 133
>Q9SXU4_CICAR (tr|Q9SXU4) Cytochrome b6-f complex iron-sulfur subunit
(Fragment) OS=Cicer arietinum PE=1 SV=1
Length = 159
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 35/39 (89%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
+GSATGGT+AKDAIGN V AE LKTHGPGDRTLTQGLK
Sbjct: 33 AGSATGGTVAKDAIGNDVIAEQWLKTHGPGDRTLTQGLK 71
>K7M2T2_SOYBN (tr|K7M2T2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 140
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 2/40 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLKM 97
SGS+ GGT+AKDA+GN V AE LK HGPGDRTLTQGLK+
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLTQGLKV 134
>C6TFS5_SOYBN (tr|C6TFS5) Cytochrome b6-f complex iron-sulfur subunit OS=Glycine
max PE=2 SV=1
Length = 262
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+ GGT+AKDA+GN V AE LK HGPGDRTLTQGLK
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLTQGLK 133
>I1M3Y7_SOYBN (tr|I1M3Y7) Cytochrome b6-f complex iron-sulfur subunit OS=Glycine
max PE=3 SV=1
Length = 227
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+ GGT+AKDA+GN V AE LK HGPGDRTLTQGLK
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLTQGLK 133
>A8Y7Z9_SOYBN (tr|A8Y7Z9) Cytochrome b6-f complex iron-sulfur subunit (Precursor)
OS=Glycine max GN=petC PE=2 SV=1
Length = 227
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+ GGT+AKDA+GN V AE LK HGPGDRTLTQGLK
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLTQGLK 133
>B7FGU7_MEDTR (tr|B7FGU7) Cytochrome b6-f complex iron-sulfur subunit OS=Medicago
truncatula GN=MTR_2g089510 PE=1 SV=1
Length = 229
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+TGGT+AKDA+GN V A LK+HGPGDRTLTQGLK
Sbjct: 95 SGSSTGGTVAKDAVGNDVVAAEWLKSHGPGDRTLTQGLK 133
>F6GXR5_VITVI (tr|F6GXR5) Cytochrome b6-f complex iron-sulfur subunit OS=Vitis
vinifera GN=VIT_12s0134g00510 PE=3 SV=1
Length = 226
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGSA G TIAKDAIGN V AE LK HGPGDRTLTQGLK
Sbjct: 94 SGSAGGATIAKDAIGNDVIAEEWLKNHGPGDRTLTQGLK 132
>F6HTI7_VITVI (tr|F6HTI7) Cytochrome b6-f complex iron-sulfur subunit OS=Vitis
vinifera GN=VIT_03s0017g00940 PE=3 SV=1
Length = 194
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
+GSA GGT+AKDA+GN V A+ LKTHGPGDRTLTQGLK
Sbjct: 62 TGSAGGGTVAKDALGNDVIADEWLKTHGPGDRTLTQGLK 100
>C6SXW5_SOYBN (tr|C6SXW5) Cytochrome b6-f complex iron-sulfur subunit OS=Glycine
max PE=2 SV=1
Length = 227
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+ GGT+AKDA+GN V AE LK HGPGDRTL QGLK
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLAQGLK 133
>I1LUB3_SOYBN (tr|I1LUB3) Cytochrome b6-f complex iron-sulfur subunit OS=Glycine
max PE=3 SV=1
Length = 227
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS+ GGT+AKDA+GN V AE LK HGPGDRTL QGLK
Sbjct: 95 SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLAQGLK 133
>A5BX41_VITVI (tr|A5BX41) Cytochrome b6-f complex iron-sulfur subunit OS=Vitis
vinifera GN=VIT_19s0014g03850 PE=3 SV=1
Length = 228
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
+GSA GG +AKDA+GN V A+ LKTHGPGDRTLTQGLK
Sbjct: 96 TGSAGGGIVAKDALGNDVIADEWLKTHGPGDRTLTQGLK 134
>Q0D5J7_ORYSJ (tr|Q0D5J7) Cytochrome b6-f complex iron-sulfur subunit OS=Oryza
sativa subsp. japonica GN=Os07g0556200 PE=2 SV=1
Length = 225
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 56 IAMWSGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
I SG+A GG +AKD +GN V AE LKTHGP DRTLTQGLK
Sbjct: 89 IPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLK 131
>I1QBI4_ORYGL (tr|I1QBI4) Cytochrome b6-f complex iron-sulfur subunit OS=Oryza
glaberrima PE=3 SV=1
Length = 225
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 56 IAMWSGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
I SG+A GG +AKD +GN V AE LKTHGP DRTLTQGLK
Sbjct: 89 IPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLK 131
>A2YMJ8_ORYSI (tr|A2YMJ8) Cytochrome b6-f complex iron-sulfur subunit OS=Oryza
sativa subsp. indica GN=OsI_26450 PE=2 SV=1
Length = 225
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 56 IAMWSGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
I SG+A GG +AKD +GN V AE LKTHGP DRTLTQGLK
Sbjct: 89 IPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLK 131
>I1GTJ6_BRADI (tr|I1GTJ6) Cytochrome b6-f complex iron-sulfur subunit
OS=Brachypodium distachyon GN=BRADI1G24980 PE=3 SV=1
Length = 221
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 60 SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
SGS TGGT+AKD +GN + E LKTHGP DRTL QGLK
Sbjct: 89 SGSNTGGTVAKDKLGNDILVEEWLKTHGPNDRTLAQGLK 127