Miyakogusa Predicted Gene
- Lj2g3v0093580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0093580.1 tr|G7L911|G7L911_MEDTR B3 domain-containing
protein OS=Medicago truncatula GN=MTR_8g103940 PE=4
SV=1,53.95,0.00000000002,B3,B3 DNA binding domain; DNA-binding
pseudobarrel domain,DNA-binding pseudobarrel domain; no
descri,CUFF.34199.1
(95 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7L911_MEDTR (tr|G7L911) B3 domain-containing protein OS=Medicag... 74 2e-11
G7IAW3_MEDTR (tr|G7IAW3) 60S ribosomal protein L7 OS=Medicago tr... 64 1e-08
A5AWG7_VITVI (tr|A5AWG7) Putative uncharacterized protein OS=Vit... 64 2e-08
K7K2E7_SOYBN (tr|K7K2E7) Uncharacterized protein OS=Glycine max ... 62 6e-08
A5BRG5_VITVI (tr|A5BRG5) Putative uncharacterized protein OS=Vit... 61 1e-07
K7LDC5_SOYBN (tr|K7LDC5) Uncharacterized protein OS=Glycine max ... 59 4e-07
K7LDC4_SOYBN (tr|K7LDC4) Uncharacterized protein OS=Glycine max ... 59 6e-07
B9MV04_POPTR (tr|B9MV04) Predicted protein OS=Populus trichocarp... 59 6e-07
A5BWP2_VITVI (tr|A5BWP2) Putative uncharacterized protein OS=Vit... 58 9e-07
K7LDA1_SOYBN (tr|K7LDA1) Uncharacterized protein OS=Glycine max ... 58 1e-06
K7LDA2_SOYBN (tr|K7LDA2) Uncharacterized protein OS=Glycine max ... 58 1e-06
B9HSR3_POPTR (tr|B9HSR3) Predicted protein OS=Populus trichocarp... 56 5e-06
G7KVW7_MEDTR (tr|G7KVW7) B3 domain-containing protein OS=Medicag... 55 7e-06
>G7L911_MEDTR (tr|G7L911) B3 domain-containing protein OS=Medicago truncatula
GN=MTR_8g103940 PE=4 SV=1
Length = 498
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 1 MILYVID-GRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFH 59
++L V+D GRTW+VK+ R +S GWKKFA DNNLKVGDVC+FE+ K+N + K F
Sbjct: 274 IVLQVLDNGRTWNVKHWGRH--VSTGWKKFAFDNNLKVGDVCLFEMIKSNAYAFKVLIFR 331
Query: 60 LGENHINLIPLHHKVG 75
LGE H +L P H G
Sbjct: 332 LGEEH-SLPPQVHGDG 346
>G7IAW3_MEDTR (tr|G7IAW3) 60S ribosomal protein L7 OS=Medicago truncatula
GN=MTR_1g108780 PE=4 SV=1
Length = 608
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 7 DGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFHLGENHIN 66
D RTW VKY LR+ +S GWK F SDNNLK+GDVC+FE+ + + K F + E +
Sbjct: 261 DERTWIVKYCLRK--MSNGWKTFVSDNNLKLGDVCLFEMINSKSYAFKVLIFRVDEEQHS 318
Query: 67 LIPLHHKVG 75
L P H G
Sbjct: 319 LPPQVHGDG 327
>A5AWG7_VITVI (tr|A5AWG7) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_040593 PE=4 SV=1
Length = 617
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 3 LYVIDGRTWHVKYLL--RRGTISAGWKKFASDNNLKVGDVCVFELTK 47
L V DGR W +KY++ R SAGW+KFA DN+L+VGDVC FEL K
Sbjct: 548 LSVSDGRAWSIKYIMGARSAHFSAGWRKFAEDNSLEVGDVCAFELVK 594
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 2 ILYVIDGRTWHVKYLLRRGTI--SAGWKKFASDNNLKVGDVCVFELTK 47
IL V DGRTW VKY+ R+ + S+GW KF DN+L+VGDVC FEL K
Sbjct: 207 ILSVSDGRTWSVKYIKRKNNVQFSSGWTKFVRDNSLEVGDVCAFELVK 254
>K7K2E7_SOYBN (tr|K7K2E7) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 301
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Query: 3 LYVIDGRTWHVKYLLR------RGTISAGWKKFASDNNLKVGDVCVFEL 45
L V++GR WH +Y +R R +S+GWK FA DNNLKVGDVC FEL
Sbjct: 222 LEVLNGRVWHARYRIRTAETRRRFELSSGWKTFAEDNNLKVGDVCTFEL 270
>A5BRG5_VITVI (tr|A5BRG5) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_028778 PE=4 SV=1
Length = 352
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Query: 3 LYVIDGRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTK 47
L V DGRTW VKY++ + + S+GW KFA DN+L+VGDVC FEL K
Sbjct: 281 LSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELIK 328
>K7LDC5_SOYBN (tr|K7LDC5) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 399
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MILYVIDGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTK 47
+IL ++DGRTW V + ++ GW+KFAS+NNL VGDVCVFEL +
Sbjct: 308 VILEILDGRTWSV--ICSATRLTEGWQKFASENNLNVGDVCVFELIQ 352
>K7LDC4_SOYBN (tr|K7LDC4) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 528
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 1 MILYVIDGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTK 47
+IL ++DGRTW V + ++ GW+KFAS+NNL VGDVCVFEL +
Sbjct: 308 VILEILDGRTWSV--ICSATRLTEGWQKFASENNLNVGDVCVFELIQ 352
>B9MV04_POPTR (tr|B9MV04) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_591695 PE=4 SV=1
Length = 391
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 2 ILYVIDGRTWHVKYLLRRGT------ISAGWKKFASDNNLKVGDVCVFELTK 47
+L V+DGRTW VKY + G I +GW KF DN L+V DVCVFELTK
Sbjct: 169 VLCVLDGRTWPVKYFVYPGNGKAKTQIRSGWNKFTWDNYLEVSDVCVFELTK 220
>A5BWP2_VITVI (tr|A5BWP2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_008016 PE=4 SV=1
Length = 749
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Query: 3 LYVIDGRTWHVKYLLRR--GTISAGWKKFASDNNLKVGDVCVFEL 45
L V + RTW +KY +RR +S+GW+KFA DN L+VGDVCVFEL
Sbjct: 690 LRVSNRRTWTLKYCIRRRDAKLSSGWRKFARDNYLQVGDVCVFEL 734
>K7LDA1_SOYBN (tr|K7LDA1) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 360
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Query: 1 MILYVIDGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFEL 45
+IL V++GRTW V + TI+ GW KFAS+N+L VGDVCVFEL
Sbjct: 269 VILEVLEGRTWPV--ICSAPTITGGWHKFASENHLNVGDVCVFEL 311
>K7LDA2_SOYBN (tr|K7LDA2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 359
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Query: 1 MILYVIDGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFEL 45
+IL V++GRTW V + TI+ GW KFAS+N+L VGDVCVFEL
Sbjct: 268 VILEVLEGRTWPV--ICSAPTITGGWHKFASENHLNVGDVCVFEL 310
>B9HSR3_POPTR (tr|B9HSR3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_770235 PE=4 SV=1
Length = 341
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 3 LYVIDGRTWHV---KYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFH 59
L V DGR W + + R +IS GW +F+ +NNLK GDVCVFEL F+ K FH
Sbjct: 273 LQVSDGREWPIQINRNQCRYLSISKGWNEFSQENNLKEGDVCVFELINKEKFVLKVAIFH 332
Query: 60 LGENHI 65
E+++
Sbjct: 333 ELEDNV 338
>G7KVW7_MEDTR (tr|G7KVW7) B3 domain-containing protein OS=Medicago truncatula
GN=MTR_7g050720 PE=4 SV=1
Length = 375
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 3 LYVIDGRTWHVKYLLRRGT--------ISAGWKKFASDNNLKVGDVCVFELTKNNLFLS 53
L +++G+ W +YL+R+G S+ WK FA DNNLKVGDVC FEL + L+
Sbjct: 305 LRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELFPTSTILT 363