Miyakogusa Predicted Gene
- Lj1g3v5038210.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5038210.2 tr|H3G9I1|H3G9I1_PHYRM DNA-directed RNA
polymerase subunit OS=Phytophthora ramorum
GN=fgenesh1_pm.C_,46.85,8e-19,RNA polymerase subunit,DNA-directed RNA
polymerase, M/15kDa subunit; C2C2 Zinc finger,Zinc finger,
T,CUFF.33918.2
(111 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I3SSH7_LOTJA (tr|I3SSH7) DNA-directed RNA polymerase subunit OS=... 234 7e-60
I1N2G1_SOYBN (tr|I1N2G1) DNA-directed RNA polymerase subunit OS=... 166 3e-39
F6I6G3_VITVI (tr|F6I6G3) DNA-directed RNA polymerase subunit OS=... 165 6e-39
I1KJX9_SOYBN (tr|I1KJX9) DNA-directed RNA polymerase subunit OS=... 160 1e-37
C6T364_SOYBN (tr|C6T364) DNA-directed RNA polymerase subunit OS=... 158 5e-37
B9SBZ2_RICCO (tr|B9SBZ2) DNA-directed RNA polymerase subunit OS=... 150 1e-34
B9I5C8_POPTR (tr|B9I5C8) DNA-directed RNA polymerase subunit OS=... 141 1e-31
K4C2R4_SOLLC (tr|K4C2R4) DNA-directed RNA polymerase subunit OS=... 135 4e-30
G7KDT1_MEDTR (tr|G7KDT1) DNA-directed RNA polymerase subunit OS=... 133 2e-29
M1C5M6_SOLTU (tr|M1C5M6) DNA-directed RNA polymerase subunit OS=... 133 3e-29
Q8LE40_ARATH (tr|Q8LE40) DNA-directed RNA polymerase subunit OS=... 131 1e-28
R0I5V3_9BRAS (tr|R0I5V3) Uncharacterized protein OS=Capsella rub... 130 1e-28
Q9LNK0_ARATH (tr|Q9LNK0) DNA-directed RNA polymerase subunit OS=... 129 3e-28
D7KQA1_ARALL (tr|D7KQA1) DNA-directed RNA polymerase subunit OS=... 129 4e-28
G7L310_MEDTR (tr|G7L310) DNA-directed RNA polymerase subunit OS=... 128 7e-28
Q9ZQC0_ARATH (tr|Q9ZQC0) DNA-directed RNA polymerase subunit OS=... 127 1e-27
M4EUZ2_BRARP (tr|M4EUZ2) DNA-directed RNA polymerase subunit OS=... 122 4e-26
M4E7L8_BRARP (tr|M4E7L8) DNA-directed RNA polymerase subunit OS=... 122 4e-26
C5Y1A6_SORBI (tr|C5Y1A6) Putative uncharacterized protein Sb04g0... 122 5e-26
M4CR21_BRARP (tr|M4CR21) DNA-directed RNA polymerase subunit OS=... 119 4e-25
K3YWX1_SETIT (tr|K3YWX1) DNA-directed RNA polymerase subunit OS=... 118 6e-25
B4FDM3_MAIZE (tr|B4FDM3) DNA-directed RNA polymerase subunit OS=... 117 1e-24
J3LFS4_ORYBR (tr|J3LFS4) DNA-directed RNA polymerase subunit OS=... 117 2e-24
Q6EU09_ORYSJ (tr|Q6EU09) DNA-directed RNA polymerase subunit OS=... 116 4e-24
I1P315_ORYGL (tr|I1P315) DNA-directed RNA polymerase subunit OS=... 116 4e-24
M0STF8_MUSAM (tr|M0STF8) DNA-directed RNA polymerase subunit OS=... 115 6e-24
B9F1L5_ORYSJ (tr|B9F1L5) DNA-directed RNA polymerase subunit OS=... 112 4e-23
A2X876_ORYSI (tr|A2X876) DNA-directed RNA polymerase subunit OS=... 112 4e-23
D5AAK0_PICSI (tr|D5AAK0) DNA-directed RNA polymerase subunit OS=... 111 1e-22
R0I784_9BRAS (tr|R0I784) Uncharacterized protein OS=Capsella rub... 110 2e-22
M0RQV6_MUSAM (tr|M0RQV6) DNA-directed RNA polymerase subunit OS=... 106 3e-21
A9SIZ2_PHYPA (tr|A9SIZ2) DNA-directed RNA polymerase subunit OS=... 105 8e-21
R1F6R9_EMIHU (tr|R1F6R9) Uncharacterized protein OS=Emiliania hu... 100 2e-19
A8I4N7_CHLRE (tr|A8I4N7) DNA-directed RNA polymerase subunit OS=... 100 2e-19
F0WLX9_9STRA (tr|F0WLX9) DNA-directed RNA polymerase subunit OS=... 100 3e-19
H3G9I1_PHYRM (tr|H3G9I1) DNA-directed RNA polymerase subunit OS=... 99 8e-19
I4YE70_WALSC (tr|I4YE70) DNA-directed RNA polymerase subunit OS=... 97 2e-18
D8TKW2_VOLCA (tr|D8TKW2) DNA-directed RNA polymerase subunit OS=... 97 3e-18
K3WD54_PYTUL (tr|K3WD54) DNA-directed RNA polymerase subunit OS=... 96 3e-18
D0NTV1_PHYIT (tr|D0NTV1) DNA-directed RNA polymerase subunit OS=... 96 4e-18
G4Z2Z6_PHYSP (tr|G4Z2Z6) DNA-directed RNA polymerase subunit OS=... 95 7e-18
F4NRP3_BATDJ (tr|F4NRP3) DNA-directed RNA polymerase subunit OS=... 95 8e-18
L8GGG4_ACACA (tr|L8GGG4) DNA-directed RNA polymerase subunit OS=... 95 1e-17
C5M563_CANTT (tr|C5M563) DNA-directed RNA polymerase subunit OS=... 94 1e-17
I0YYJ1_9CHLO (tr|I0YYJ1) DNA-directed RNA polymerase subunit OS=... 93 3e-17
R9ASA2_WALIC (tr|R9ASA2) DNA-directed RNA polymerase III subunit... 93 4e-17
A5DDP4_PICGU (tr|A5DDP4) DNA-directed RNA polymerase subunit OS=... 92 6e-17
E6ZPD5_SPORE (tr|E6ZPD5) DNA-directed RNA polymerase subunit OS=... 92 7e-17
G3MN44_9ACAR (tr|G3MN44) DNA-directed RNA polymerase subunit OS=... 92 7e-17
M4B6F3_HYAAE (tr|M4B6F3) DNA-directed RNA polymerase subunit OS=... 92 8e-17
C1DZH6_MICSR (tr|C1DZH6) DNA-directed RNA polymerase subunit OS=... 91 1e-16
B4MPJ2_DROWI (tr|B4MPJ2) DNA-directed RNA polymerase subunit OS=... 91 1e-16
G8YFK6_PICSO (tr|G8YFK6) DNA-directed RNA polymerase subunit OS=... 91 1e-16
C1MJC6_MICPC (tr|C1MJC6) DNA-directed RNA polymerase subunit OS=... 91 1e-16
Q6BMC8_DEBHA (tr|Q6BMC8) DNA-directed RNA polymerase subunit OS=... 91 1e-16
B4KR43_DROMO (tr|B4KR43) DNA-directed RNA polymerase subunit OS=... 91 1e-16
H2Z908_CIOSA (tr|H2Z908) DNA-directed RNA polymerase subunit OS=... 91 2e-16
D3TLL1_GLOMM (tr|D3TLL1) DNA-directed RNA polymerase subunit OS=... 91 2e-16
B3NJW4_DROER (tr|B3NJW4) DNA-directed RNA polymerase subunit OS=... 91 2e-16
E1ZHH3_CHLVA (tr|E1ZHH3) DNA-directed RNA polymerase subunit OS=... 91 2e-16
B4ME99_DROVI (tr|B4ME99) DNA-directed RNA polymerase subunit OS=... 90 2e-16
Q5A5N9_CANAL (tr|Q5A5N9) DNA-directed RNA polymerase subunit OS=... 90 2e-16
Q1RPU6_CIOIN (tr|Q1RPU6) DNA-directed RNA polymerase subunit OS=... 90 2e-16
I2FN36_USTH4 (tr|I2FN36) DNA-directed RNA polymerase subunit OS=... 90 3e-16
H9KBC5_APIME (tr|H9KBC5) DNA-directed RNA polymerase subunit OS=... 90 3e-16
H8X4D6_CANO9 (tr|H8X4D6) DNA-directed RNA polymerase subunit OS=... 90 3e-16
G8BK13_CANPC (tr|G8BK13) DNA-directed RNA polymerase subunit OS=... 90 3e-16
B9WCW5_CANDC (tr|B9WCW5) DNA-directed RNA polymerase subunit OS=... 90 3e-16
A3LW94_PICST (tr|A3LW94) DNA-directed RNA polymerase subunit OS=... 90 3e-16
K9HBK4_AGABB (tr|K9HBK4) DNA-directed RNA polymerase subunit OS=... 90 3e-16
K5WWE5_AGABU (tr|K5WWE5) DNA-directed RNA polymerase subunit OS=... 90 3e-16
B4PA35_DROYA (tr|B4PA35) DNA-directed RNA polymerase subunit OS=... 89 5e-16
Q17L91_AEDAE (tr|Q17L91) DNA-directed RNA polymerase subunit OS=... 89 5e-16
C4YKX9_CANAW (tr|C4YKX9) DNA-directed RNA polymerase subunit OS=... 89 5e-16
E0VJY8_PEDHC (tr|E0VJY8) DNA-directed RNA polymerase subunit OS=... 89 6e-16
B0D7I7_LACBS (tr|B0D7I7) DNA-directed RNA polymerase subunit OS=... 89 6e-16
K8YVQ6_9STRA (tr|K8YVQ6) DNA-directed RNA polymerase subunit OS=... 89 7e-16
B0X903_CULQU (tr|B0X903) DNA-directed RNA polymerase subunit OS=... 89 7e-16
C3KGN0_DROME (tr|C3KGN0) DNA-directed RNA polymerase subunit (Fr... 89 8e-16
J9I6L3_9SPIT (tr|J9I6L3) DNA-directed RNA polymerase subunit OS=... 88 9e-16
B4QF36_DROSI (tr|B4QF36) DNA-directed RNA polymerase subunit OS=... 88 1e-15
A1ZBX4_DROME (tr|A1ZBX4) DNA-directed RNA polymerase subunit OS=... 88 1e-15
A4RUS3_OSTLU (tr|A4RUS3) DNA-directed RNA polymerase subunit OS=... 88 1e-15
K2G7P7_ENTNP (tr|K2G7P7) DNA-directed RNA polymerase subunit OS=... 88 1e-15
N9V9I9_ENTHI (tr|N9V9I9) RNA polymerase III subunit, putative OS... 88 1e-15
M7VYE8_ENTHI (tr|M7VYE8) RNA polymerase III subunit OS=Entamoeba... 88 1e-15
M3S2V1_ENTHI (tr|M3S2V1) DNA-directed RNA polymerase subunit OS=... 88 1e-15
M2R9L4_ENTHI (tr|M2R9L4) DNA-directed RNA polymerase subunit OS=... 88 1e-15
C4M8P1_ENTHI (tr|C4M8P1) DNA-directed RNA polymerase subunit OS=... 88 1e-15
K5VY13_PHACS (tr|K5VY13) DNA-directed RNA polymerase subunit OS=... 88 1e-15
E2B7S8_HARSA (tr|E2B7S8) DNA-directed RNA polymerase subunit (Fr... 87 1e-15
E9CFE9_CAPO3 (tr|E9CFE9) DNA-directed RNA polymerase subunit OS=... 87 1e-15
K0KGM8_WICCF (tr|K0KGM8) DNA-directed RNA polymerase subunit OS=... 87 2e-15
C4Y9I4_CLAL4 (tr|C4Y9I4) DNA-directed RNA polymerase subunit OS=... 87 2e-15
G0W4I0_NAUDC (tr|G0W4I0) DNA-directed RNA polymerase subunit OS=... 87 2e-15
K1QXT5_CRAGI (tr|K1QXT5) DNA-directed RNA polymerase subunit OS=... 87 2e-15
B4J958_DROGR (tr|B4J958) DNA-directed RNA polymerase subunit OS=... 87 2e-15
L7M2H7_9ACAR (tr|L7M2H7) DNA-directed RNA polymerase subunit OS=... 87 2e-15
M5GFA2_DACSP (tr|M5GFA2) Uncharacterized protein OS=Dacryopinax ... 87 2e-15
H2AMF0_KAZAF (tr|H2AMF0) DNA-directed RNA polymerase subunit OS=... 87 2e-15
M7XH64_RHOTO (tr|M7XH64) DNA-directed RNA polymerase III subunit... 87 2e-15
A7SWZ1_NEMVE (tr|A7SWZ1) DNA-directed RNA polymerase subunit OS=... 86 4e-15
B0ENS7_ENTDS (tr|B0ENS7) DNA-directed RNA polymerase subunit OS=... 86 4e-15
D8SFE7_SELML (tr|D8SFE7) DNA-directed RNA polymerase subunit OS=... 86 4e-15
D8R5K0_SELML (tr|D8R5K0) DNA-directed RNA polymerase subunit OS=... 86 5e-15
K7IXZ1_NASVI (tr|K7IXZ1) DNA-directed RNA polymerase subunit OS=... 86 5e-15
A9QVW4_CAEBE (tr|A9QVW4) DNA-directed RNA polymerase subunit OS=... 86 5e-15
A8XIZ3_CAEBR (tr|A8XIZ3) DNA-directed RNA polymerase subunit OS=... 86 6e-15
D8TDA8_SELML (tr|D8TDA8) DNA-directed RNA polymerase subunit OS=... 86 6e-15
J8Q6L4_SACAR (tr|J8Q6L4) DNA-directed RNA polymerase subunit OS=... 85 7e-15
G2WAF1_YEASK (tr|G2WAF1) DNA-directed RNA polymerase subunit OS=... 85 7e-15
C8Z4W5_YEAS8 (tr|C8Z4W5) DNA-directed RNA polymerase subunit OS=... 85 7e-15
C7GTA4_YEAS2 (tr|C7GTA4) DNA-directed RNA polymerase subunit OS=... 85 7e-15
B3LGM2_YEAS1 (tr|B3LGM2) DNA-directed RNA polymerase subunit OS=... 85 7e-15
A6ZY12_YEAS7 (tr|A6ZY12) DNA-directed RNA polymerase subunit OS=... 85 7e-15
N1P824_YEASX (tr|N1P824) Rpc11p OS=Saccharomyces cerevisiae CEN.... 85 7e-15
B7P467_IXOSC (tr|B7P467) DNA-directed RNA polymerase subunit (Fr... 85 9e-15
L8WQG7_9HOMO (tr|L8WQG7) DNA-directed RNA polymerase subunit OS=... 84 1e-14
Q70W34_KLULC (tr|Q70W34) DNA-directed RNA polymerase subunit OS=... 84 1e-14
F2Z6J0_KLULA (tr|F2Z6J0) DNA-directed RNA polymerase subunit OS=... 84 1e-14
G0V827_NAUCC (tr|G0V827) DNA-directed RNA polymerase subunit OS=... 84 2e-14
E3NLB5_CAERE (tr|E3NLB5) DNA-directed RNA polymerase subunit OS=... 84 2e-14
Q6WCQ3_IXOSC (tr|Q6WCQ3) DNA-directed RNA polymerase subunit OS=... 84 2e-14
F4X5U8_ACREC (tr|F4X5U8) DNA-directed RNA polymerase subunit OS=... 84 2e-14
H2W1Y6_CAEJA (tr|H2W1Y6) DNA-directed RNA polymerase subunit OS=... 84 2e-14
F0ZS39_DICPU (tr|F0ZS39) DNA-directed RNA polymerase subunit OS=... 84 2e-14
H9I8Z1_ATTCE (tr|H9I8Z1) DNA-directed RNA polymerase subunit OS=... 84 3e-14
Q750C6_ASHGO (tr|Q750C6) DNA-directed RNA polymerase subunit OS=... 83 3e-14
M9N6P5_ASHGS (tr|M9N6P5) FAGR029Wp OS=Ashbya gossypii FDAG1 GN=F... 83 3e-14
G8ZTI1_TORDC (tr|G8ZTI1) DNA-directed RNA polymerase subunit OS=... 83 3e-14
C3Y255_BRAFL (tr|C3Y255) DNA-directed RNA polymerase subunit OS=... 83 4e-14
N6TUV5_9CUCU (tr|N6TUV5) Uncharacterized protein (Fragment) OS=D... 82 5e-14
E3X4W0_ANODA (tr|E3X4W0) DNA-directed RNA polymerase subunit OS=... 82 6e-14
Q6P7G0_XENLA (tr|Q6P7G0) DNA-directed RNA polymerase subunit OS=... 82 6e-14
B3RF23_SORAR (tr|B3RF23) DNA-directed RNA polymerase subunit OS=... 82 6e-14
Q8BU05_MOUSE (tr|Q8BU05) DNA-directed RNA polymerase subunit OS=... 82 7e-14
G3IBS2_CRIGR (tr|G3IBS2) DNA-directed RNA polymerase subunit OS=... 82 7e-14
E1G9P1_LOALO (tr|E1G9P1) DNA-directed RNA polymerase subunit OS=... 82 8e-14
M3WAT9_FELCA (tr|M3WAT9) DNA-directed RNA polymerase subunit OS=... 82 8e-14
E2QZU0_CANFA (tr|E2QZU0) DNA-directed RNA polymerase subunit OS=... 82 8e-14
E1C6D4_CHICK (tr|E1C6D4) DNA-directed RNA polymerase subunit OS=... 82 1e-13
H0V7F6_CAVPO (tr|H0V7F6) DNA-directed RNA polymerase subunit OS=... 81 1e-13
G5BXZ0_HETGA (tr|G5BXZ0) DNA-directed RNA polymerase subunit OS=... 81 1e-13
I2H905_TETBL (tr|I2H905) DNA-directed RNA polymerase subunit OS=... 81 1e-13
C1FXX2_DASNO (tr|C1FXX2) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q5KEF1_CRYNJ (tr|Q5KEF1) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q55P07_CRYNB (tr|Q55P07) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q01CB3_OSTTA (tr|Q01CB3) DNA-directed RNA polymerase subunit OS=... 81 1e-13
H0GSL5_9SACH (tr|H0GSL5) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q6C866_YARLI (tr|Q6C866) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q9N4B7_CAEEL (tr|Q9N4B7) DNA-directed RNA polymerase subunit OS=... 81 1e-13
F1LHR9_ASCSU (tr|F1LHR9) DNA-directed RNA polymerase subunit OS=... 81 1e-13
C5DE90_LACTC (tr|C5DE90) DNA-directed RNA polymerase subunit OS=... 81 1e-13
A8QFI6_BRUMA (tr|A8QFI6) DNA-directed RNA polymerase subunit OS=... 81 1e-13
E6R9Z3_CRYGW (tr|E6R9Z3) DNA-directed RNA polymerase subunit OS=... 81 1e-13
B5G0B7_TAEGU (tr|B5G0B7) DNA-directed RNA polymerase subunit OS=... 81 1e-13
E9IEF8_SOLIN (tr|E9IEF8) DNA-directed RNA polymerase subunit (Fr... 81 1e-13
A8BG20_GIAIC (tr|A8BG20) DNA-directed RNA polymerase subunit OS=... 81 1e-13
J9VTJ7_CRYNH (tr|J9VTJ7) DNA-directed RNA polymerase subunit OS=... 81 1e-13
J9ERG5_WUCBA (tr|J9ERG5) DNA-directed RNA polymerase subunit OS=... 81 1e-13
Q5FVH1_RAT (tr|Q5FVH1) DNA-directed RNA polymerase subunit OS=Ra... 81 2e-13
L5KH64_PTEAL (tr|L5KH64) DNA-directed RNA polymerase subunit OS=... 81 2e-13
K9IGP0_DESRO (tr|K9IGP0) DNA-directed RNA polymerase subunit OS=... 81 2e-13
H9EUX4_MACMU (tr|H9EUX4) DNA-directed RNA polymerase subunit OS=... 81 2e-13
H2QA65_PANTR (tr|H2QA65) DNA-directed RNA polymerase subunit OS=... 81 2e-13
G3QZI9_GORGO (tr|G3QZI9) DNA-directed RNA polymerase subunit OS=... 81 2e-13
G1R900_NOMLE (tr|G1R900) DNA-directed RNA polymerase subunit OS=... 81 2e-13
G1PSP3_MYOLU (tr|G1PSP3) DNA-directed RNA polymerase subunit OS=... 81 2e-13
F2Z4X7_PIG (tr|F2Z4X7) DNA-directed RNA polymerase subunit OS=Su... 81 2e-13
B2KHV5_RHIFE (tr|B2KHV5) DNA-directed RNA polymerase subunit OS=... 81 2e-13
B1MT29_CALMO (tr|B1MT29) DNA-directed RNA polymerase subunit OS=... 81 2e-13
B0VX71_CALJA (tr|B0VX71) DNA-directed RNA polymerase subunit OS=... 81 2e-13
A9L8T4_PAPAN (tr|A9L8T4) DNA-directed RNA polymerase subunit OS=... 81 2e-13
J7S8G9_KAZNA (tr|J7S8G9) DNA-directed RNA polymerase subunit OS=... 81 2e-13
D7G5N9_ECTSI (tr|D7G5N9) DNA-directed RNA polymerase subunit OS=... 81 2e-13
C5DU35_ZYGRC (tr|C5DU35) DNA-directed RNA polymerase subunit OS=... 80 2e-13
G3UE31_LOXAF (tr|G3UE31) DNA-directed RNA polymerase subunit OS=... 80 2e-13
R7SFW8_CONPW (tr|R7SFW8) Uncharacterized protein OS=Coniophora p... 80 2e-13
C1BZC8_ESOLU (tr|C1BZC8) DNA-directed RNA polymerase subunit OS=... 80 2e-13
I3MUB5_SPETR (tr|I3MUB5) DNA-directed RNA polymerase subunit OS=... 80 2e-13
F1N3E8_BOVIN (tr|F1N3E8) DNA-directed RNA polymerase subunit OS=... 80 2e-13
M3ZD13_XIPMA (tr|M3ZD13) DNA-directed RNA polymerase subunit OS=... 80 2e-13
F0VN62_NEOCL (tr|F0VN62) DNA-directed RNA polymerase subunit OS=... 80 2e-13
B5KFS3_TAEGU (tr|B5KFS3) DNA-directed RNA polymerase subunit OS=... 80 2e-13
Q8JH46_9PERC (tr|Q8JH46) DNA-directed RNA polymerase subunit OS=... 80 2e-13
E1EY26_GIAIA (tr|E1EY26) DNA-directed RNA polymerase subunit OS=... 80 3e-13
G1XMK6_ARTOA (tr|G1XMK6) DNA-directed RNA polymerase subunit OS=... 80 3e-13
B4GGZ5_DROPE (tr|B4GGZ5) DNA-directed RNA polymerase subunit OS=... 80 3e-13
A7TL36_VANPO (tr|A7TL36) DNA-directed RNA polymerase subunit OS=... 80 3e-13
I1BX20_RHIO9 (tr|I1BX20) Uncharacterized protein OS=Rhizopus del... 80 3e-13
H3B418_LATCH (tr|H3B418) DNA-directed RNA polymerase subunit OS=... 80 3e-13
N4U296_FUSOX (tr|N4U296) DNA-directed RNA polymerase III subunit... 80 3e-13
J9MKE7_FUSO4 (tr|J9MKE7) DNA-directed RNA polymerase subunit OS=... 80 3e-13
Q28ZP6_DROPS (tr|Q28ZP6) DNA-directed RNA polymerase subunit OS=... 80 3e-13
Q5FVV0_XENTR (tr|Q5FVV0) DNA-directed RNA polymerase subunit OS=... 80 3e-13
D8M8E6_BLAHO (tr|D8M8E6) DNA-directed RNA polymerase subunit OS=... 80 3e-13
B3MIT9_DROAN (tr|B3MIT9) DNA-directed RNA polymerase subunit OS=... 80 4e-13
L2GP39_VITCO (tr|L2GP39) DNA-directed RNA polymerase subunit OS=... 80 4e-13
C1BEQ5_ONCMY (tr|C1BEQ5) DNA-directed RNA polymerase subunit OS=... 80 4e-13
B5XDQ5_SALSA (tr|B5XDQ5) DNA-directed RNA polymerase subunit OS=... 80 4e-13
C6LXC5_GIAIB (tr|C6LXC5) DNA-directed RNA polymerase subunit OS=... 79 4e-13
I1G5B7_AMPQE (tr|I1G5B7) DNA-directed RNA polymerase subunit OS=... 79 4e-13
H2TZ33_TAKRU (tr|H2TZ33) DNA-directed RNA polymerase subunit OS=... 79 4e-13
M2RP64_CERSU (tr|M2RP64) DNA-directed RNA polymerase subunit OS=... 79 4e-13
G2Q5I4_THIHA (tr|G2Q5I4) DNA-directed RNA polymerase subunit OS=... 79 5e-13
L9KYE6_TUPCH (tr|L9KYE6) DNA-directed RNA polymerase subunit OS=... 79 5e-13
D2HDU8_AILME (tr|D2HDU8) DNA-directed RNA polymerase subunit (Fr... 79 5e-13
Q4RHC2_TETNG (tr|Q4RHC2) DNA-directed RNA polymerase subunit (Fr... 79 5e-13
B3L0T6_PLAKH (tr|B3L0T6) DNA-directed RNA polymerase subunit OS=... 79 6e-13
R7TW02_9ANNE (tr|R7TW02) Uncharacterized protein OS=Capitella te... 79 6e-13
R8B9H6_9PEZI (tr|R8B9H6) Putative dna-directed rna polymerase ii... 79 7e-13
G9KHT8_MUSPF (tr|G9KHT8) DNA-directed RNA polymerase subunit (Fr... 79 7e-13
D2VL62_NAEGR (tr|D2VL62) DNA-directed RNA polymerase subunit OS=... 79 7e-13
I3IYV3_ORENI (tr|I3IYV3) DNA-directed RNA polymerase subunit OS=... 79 7e-13
B8K127_RABIT (tr|B8K127) DNA-directed RNA polymerase subunit OS=... 79 7e-13
H0WKX8_OTOGA (tr|H0WKX8) DNA-directed RNA polymerase subunit OS=... 79 8e-13
G4TWU1_PIRID (tr|G4TWU1) Probable Rpc11-DNA-directed RNA polymer... 79 8e-13
R0M291_NOSBO (tr|R0M291) DNA-directed RNA polymerase III subunit... 79 8e-13
G8JNT8_ERECY (tr|G8JNT8) DNA-directed RNA polymerase subunit OS=... 78 9e-13
F4RSB7_MELLP (tr|F4RSB7) DNA-directed RNA polymerase subunit OS=... 78 1e-12
Q6DGU0_DANRE (tr|Q6DGU0) DNA-directed RNA polymerase subunit OS=... 78 1e-12
B9PK71_TOXGO (tr|B9PK71) DNA-directed RNA polymerase subunit OS=... 78 1e-12
E3TE49_ICTPU (tr|E3TE49) DNA-directed RNA polymerase subunit OS=... 78 1e-12
E3TCX2_9TELE (tr|E3TCX2) DNA-directed RNA polymerase subunit OS=... 78 1e-12
Q2H571_CHAGB (tr|Q2H571) DNA-directed RNA polymerase subunit OS=... 78 1e-12
I2K2J8_DEKBR (tr|I2K2J8) DNA-directed RNA polymerase subunit OS=... 77 2e-12
L7IXL0_MAGOR (tr|L7IXL0) DNA-directed RNA polymerase subunit OS=... 77 2e-12
L7ICR5_MAGOR (tr|L7ICR5) DNA-directed RNA polymerase subunit OS=... 77 2e-12
G5EHE0_MAGO7 (tr|G5EHE0) DNA-directed RNA polymerase subunit OS=... 77 2e-12
F0Y761_AURAN (tr|F0Y761) DNA-directed RNA polymerase subunit OS=... 77 2e-12
G0S1W3_CHATD (tr|G0S1W3) DNA-directed RNA polymerase subunit OS=... 77 2e-12
G8C0H9_TETPH (tr|G8C0H9) DNA-directed RNA polymerase subunit OS=... 77 2e-12
B5X6F8_SALSA (tr|B5X6F8) DNA-directed RNA polymerase subunit OS=... 77 2e-12
F0XK34_GROCL (tr|F0XK34) DNA-directed RNA polymerase subunit OS=... 77 2e-12
C7YMJ1_NECH7 (tr|C7YMJ1) DNA-directed RNA polymerase subunit OS=... 77 2e-12
G3PLH8_GASAC (tr|G3PLH8) DNA-directed RNA polymerase subunit OS=... 77 3e-12
K1W5T7_MARBU (tr|K1W5T7) DNA-directed RNA polymerase subunit OS=... 77 3e-12
H2LK93_ORYLA (tr|H2LK93) DNA-directed RNA polymerase subunit OS=... 77 3e-12
B5Y459_PHATC (tr|B5Y459) DNA-directed RNA polymerase subunit OS=... 77 3e-12
C3KJD5_ANOFI (tr|C3KJD5) DNA-directed RNA polymerase subunit OS=... 76 5e-12
G3BCR7_CANTC (tr|G3BCR7) DNA-directed RNA polymerase subunit OS=... 76 5e-12
M4GGL7_MAGP6 (tr|M4GGL7) DNA-directed RNA polymerase subunit OS=... 76 5e-12
D8QIT0_SCHCM (tr|D8QIT0) DNA-directed RNA polymerase subunit OS=... 76 5e-12
A9UWA6_MONBE (tr|A9UWA6) DNA-directed RNA polymerase subunit OS=... 75 8e-12
F2QUX4_PICP7 (tr|F2QUX4) DNA-directed RNA polymerase subunit OS=... 75 8e-12
C4R616_PICPG (tr|C4R616) DNA-directed RNA polymerase subunit OS=... 75 8e-12
M7PJ52_9ASCO (tr|M7PJ52) Uncharacterized protein OS=Pneumocystis... 75 8e-12
C1BS50_9MAXI (tr|C1BS50) DNA-directed RNA polymerase subunit OS=... 75 9e-12
B3S471_TRIAD (tr|B3S471) DNA-directed RNA polymerase subunit OS=... 75 9e-12
B4HQM8_DROSE (tr|B4HQM8) DNA-directed RNA polymerase subunit OS=... 75 9e-12
M9M1Y6_9BASI (tr|M9M1Y6) Pleiotropic drug resistance proteins OS... 75 1e-11
C4V7E3_NOSCE (tr|C4V7E3) DNA-directed RNA polymerase subunit OS=... 75 1e-11
F2U3L2_SALS5 (tr|F2U3L2) DNA-directed RNA polymerase subunit OS=... 75 1e-11
L0P9L0_PNEJ8 (tr|L0P9L0) DNA-directed RNA polymerase subunit OS=... 75 1e-11
J5JEZ8_BEAB2 (tr|J5JEZ8) DNA-directed RNA polymerase subunit OS=... 75 1e-11
E2A3U7_CAMFO (tr|E2A3U7) DNA-directed RNA polymerase subunit (Fr... 74 1e-11
F0WDI8_9STRA (tr|F0WDI8) DNA-directed RNA polymerase subunit OS=... 74 1e-11
B6AHL8_CRYMR (tr|B6AHL8) DNA-directed RNA polymerase subunit OS=... 74 2e-11
L1IRK5_GUITH (tr|L1IRK5) DNA-directed RNA polymerase subunit OS=... 74 2e-11
M2VXY0_GALSU (tr|M2VXY0) DNA-directed RNA polymerase subunit OS=... 74 2e-11
A8NJC4_COPC7 (tr|A8NJC4) DNA-directed RNA polymerase subunit OS=... 74 2e-11
K6UIJ2_9APIC (tr|K6UIJ2) DNA-directed RNA polymerase subunit OS=... 74 2e-11
A2EBM6_TRIVA (tr|A2EBM6) DNA-directed RNA polymerase subunit OS=... 74 3e-11
Q4YPC3_PLABA (tr|Q4YPC3) DNA-directed RNA polymerase subunit OS=... 74 3e-11
A5KBL4_PLAVS (tr|A5KBL4) DNA-directed RNA polymerase subunit OS=... 73 4e-11
G9NPE9_HYPAI (tr|G9NPE9) DNA-directed RNA polymerase subunit OS=... 73 4e-11
B2ATA0_PODAN (tr|B2ATA0) DNA-directed RNA polymerase subunit OS=... 73 4e-11
Q54K02_DICDI (tr|Q54K02) DNA-directed RNA polymerase subunit OS=... 73 4e-11
G9N7K4_HYPVG (tr|G9N7K4) DNA-directed RNA polymerase subunit OS=... 72 5e-11
D5G9H5_TUBMM (tr|D5G9H5) DNA-directed RNA polymerase subunit OS=... 72 5e-11
Q4Y0E1_PLACH (tr|Q4Y0E1) DNA-directed RNA polymerase subunit OS=... 72 6e-11
E1RIW2_METP4 (tr|E1RIW2) DNA-directed RNA polymerase subunit OS=... 72 6e-11
G1U7J8_RABIT (tr|G1U7J8) DNA-directed RNA polymerase subunit (Fr... 72 6e-11
C5L7A3_PERM5 (tr|C5L7A3) DNA-directed RNA polymerase subunit OS=... 72 6e-11
N1J5T4_ERYGR (tr|N1J5T4) RNA polymerase III subunit C11 OS=Blume... 72 6e-11
G0RQM2_HYPJQ (tr|G0RQM2) DNA-directed RNA polymerase subunit OS=... 72 7e-11
D6W843_TRICA (tr|D6W843) DNA-directed RNA polymerase subunit OS=... 72 7e-11
Q0U901_PHANO (tr|Q0U901) DNA-directed RNA polymerase subunit OS=... 72 7e-11
E4NN06_HALBP (tr|E4NN06) DNA-directed RNA polymerase subunit OS=... 72 8e-11
Q6MUM9_NEUCS (tr|Q6MUM9) DNA-directed RNA polymerase subunit OS=... 72 8e-11
G4U6X2_NEUT9 (tr|G4U6X2) DNA-directed RNA polymerase subunit OS=... 72 8e-11
F8N4K3_NEUT8 (tr|F8N4K3) DNA-directed RNA polymerase subunit OS=... 72 8e-11
F7VQC1_SORMK (tr|F7VQC1) DNA-directed RNA polymerase subunit OS=... 72 8e-11
H0GE07_9SACH (tr|H0GE07) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7QCQ8_YEASZ (tr|E7QCQ8) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7Q235_YEASB (tr|E7Q235) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7NFL0_YEASO (tr|E7NFL0) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7LSJ1_YEASV (tr|E7LSJ1) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7KLG0_YEASL (tr|E7KLG0) DNA-directed RNA polymerase subunit OS=... 72 8e-11
E7KAP6_YEASA (tr|E7KAP6) DNA-directed RNA polymerase subunit OS=... 72 8e-11
G3JA24_CORMM (tr|G3JA24) DNA-directed RNA polymerase subunit OS=... 72 9e-11
R1GMJ3_9PEZI (tr|R1GMJ3) Putative rna polymerase iii subunit c11... 72 1e-10
Q4TTY9_9EURY (tr|Q4TTY9) DNA-directed RNA polymerase subunit OS=... 72 1e-10
N1Q6N3_9PEZI (tr|N1Q6N3) Uncharacterized protein (Fragment) OS=P... 71 1e-10
E6N523_9ARCH (tr|E6N523) DNA-directed RNA polymerase subunit OS=... 71 1e-10
N4VD81_COLOR (tr|N4VD81) DNA-directed RNA polymerase iii subunit... 71 1e-10
K2SKU6_MACPH (tr|K2SKU6) DNA-directed RNA polymerase subunit OS=... 71 2e-10
M0CS49_9EURY (tr|M0CS49) DNA-directed RNA polymerase subunit OS=... 70 2e-10
K3VGX5_FUSPC (tr|K3VGX5) DNA-directed RNA polymerase subunit OS=... 70 2e-10
I1RW90_GIBZE (tr|I1RW90) DNA-directed RNA polymerase subunit OS=... 70 2e-10
Q6FRH9_CANGA (tr|Q6FRH9) DNA-directed RNA polymerase subunit OS=... 70 2e-10
C5K7H8_PERM5 (tr|C5K7H8) DNA-directed RNA polymerase subunit OS=... 70 2e-10
K8F391_9CHLO (tr|K8F391) DNA-directed RNA polymerase subunit OS=... 70 2e-10
E9ENB3_METAR (tr|E9ENB3) DNA-directed RNA polymerase subunit OS=... 70 3e-10
Q4P5F3_USTMA (tr|Q4P5F3) DNA-directed RNA polymerase subunit OS=... 70 3e-10
E2LEC8_MONPE (tr|E2LEC8) DNA-directed RNA polymerase subunit (Fr... 70 3e-10
N6VZ68_9EURY (tr|N6VZ68) Transcription-associated protein TFIIS ... 70 3e-10
H3F5P1_PRIPA (tr|H3F5P1) DNA-directed RNA polymerase subunit OS=... 69 4e-10
I3ZWH8_9EURY (tr|I3ZWH8) DNA-directed RNA polymerase subunit OS=... 69 5e-10
Q5JF34_PYRKO (tr|Q5JF34) DNA-directed RNA polymerase subunit OS=... 69 5e-10
O96159_PLAF7 (tr|O96159) DNA-directed RNA polymerase subunit OS=... 69 5e-10
F0U7L8_AJEC8 (tr|F0U7L8) DNA-directed RNA polymerase subunit OS=... 69 6e-10
C6HRH0_AJECH (tr|C6HRH0) DNA-directed RNA polymerase subunit OS=... 69 6e-10
C0NUV3_AJECG (tr|C0NUV3) DNA-directed RNA polymerase subunit OS=... 69 6e-10
M1XTJ3_9EURY (tr|M1XTJ3) DNA-directed RNA polymerase subunit OS=... 69 7e-10
N1QHJ9_9PEZI (tr|N1QHJ9) Uncharacterized protein OS=Mycosphaerel... 69 7e-10
K7G1W3_PELSI (tr|K7G1W3) DNA-directed RNA polymerase subunit OS=... 69 7e-10
G0HKD3_THES4 (tr|G0HKD3) DNA-directed RNA polymerase subunit OS=... 69 8e-10
N4XWD7_COCHE (tr|N4XWD7) Uncharacterized protein OS=Bipolaris ma... 69 8e-10
M2TUV0_COCHE (tr|M2TUV0) DNA-directed RNA polymerase subunit OS=... 69 8e-10
M2STZ2_COCSA (tr|M2STZ2) DNA-directed RNA polymerase subunit OS=... 69 8e-10
G3ALV5_SPAPN (tr|G3ALV5) DNA-directed RNA polymerase subunit OS=... 68 9e-10
R4XA39_9ASCO (tr|R4XA39) DNA-directed RNA polymerase subunit OS=... 68 1e-09
C5A5N8_THEGJ (tr|C5A5N8) DNA-directed RNA polymerase subunit OS=... 68 1e-09
Q15ES4_SCHMA (tr|Q15ES4) DNA-directed RNA polymerase subunit OS=... 68 1e-09
G1DG17_CAPHI (tr|G1DG17) DNA-directed RNA polymerase subunit OS=... 68 1e-09
H1V9K0_COLHI (tr|H1V9K0) DNA-directed RNA polymerase subunit OS=... 68 1e-09
M0PQM7_9EURY (tr|M0PQM7) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M0P3V6_9EURY (tr|M0P3V6) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M0F074_9EURY (tr|M0F074) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M0EWL7_9EURY (tr|M0EWL7) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M0DIU4_9EURY (tr|M0DIU4) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M2MVX3_9PEZI (tr|M2MVX3) DNA-directed RNA polymerase subunit OS=... 67 2e-09
H0XM60_OTOGA (tr|H0XM60) DNA-directed RNA polymerase subunit (Fr... 67 2e-09
M1WBD6_CLAPU (tr|M1WBD6) DNA-directed RNA polymerase subunit OS=... 67 2e-09
Q2U6V6_ASPOR (tr|Q2U6V6) DNA-directed RNA polymerase subunit OS=... 67 2e-09
I8A4V2_ASPO3 (tr|I8A4V2) DNA-directed RNA polymerase subunit OS=... 67 2e-09
B8NLF0_ASPFN (tr|B8NLF0) DNA-directed RNA polymerase subunit OS=... 67 2e-09
B7R0T6_9EURY (tr|B7R0T6) DNA-directed RNA polymerase subunit OS=... 67 2e-09
R7YN68_9EURO (tr|R7YN68) Uncharacterized protein OS=Coniosporium... 67 2e-09
B6K2W2_SCHJY (tr|B6K2W2) DNA-directed RNA polymerase subunit OS=... 67 2e-09
G2MJS3_9ARCH (tr|G2MJS3) DNA-directed RNA polymerase subunit OS=... 67 2e-09
G7EAE2_MIXOS (tr|G7EAE2) DNA-directed RNA polymerase subunit OS=... 67 2e-09
M0M306_9EURY (tr|M0M306) DNA-directed RNA polymerase subunit OS=... 67 2e-09
G1Q5L6_MYOLU (tr|G1Q5L6) DNA-directed RNA polymerase subunit OS=... 67 2e-09
N1Q376_MYCPJ (tr|N1Q376) Uncharacterized protein OS=Dothistroma ... 67 2e-09
Q5DC18_SCHJA (tr|Q5DC18) DNA-directed RNA polymerase subunit OS=... 67 2e-09
D5VRR1_METIM (tr|D5VRR1) DNA-directed RNA polymerase subunit OS=... 67 3e-09
F2SBZ0_TRIRC (tr|F2SBZ0) DNA-directed RNA polymerase subunit OS=... 67 3e-09
F2S2M8_TRIT1 (tr|F2S2M8) DNA-directed RNA polymerase subunit OS=... 67 3e-09
F2PKC4_TRIEC (tr|F2PKC4) DNA-directed RNA polymerase subunit OS=... 67 3e-09
C7P7U4_METFA (tr|C7P7U4) DNA-directed RNA polymerase subunit OS=... 67 3e-09
M0KRP4_HALAR (tr|M0KRP4) DNA-directed RNA polymerase subunit OS=... 67 3e-09
Q5V5C5_HALMA (tr|Q5V5C5) DNA-directed RNA polymerase subunit OS=... 67 3e-09
D3S3Q1_METSF (tr|D3S3Q1) DNA-directed RNA polymerase subunit OS=... 67 3e-09
C6A1Y3_THESM (tr|C6A1Y3) DNA-directed RNA polymerase subunit OS=... 66 3e-09
E2LFY1_MONPE (tr|E2LFY1) Uncharacterized protein OS=Moniliophtho... 66 4e-09
H1Z3K6_9EURY (tr|H1Z3K6) DNA-directed RNA polymerase subunit OS=... 66 4e-09
G7YUK2_CLOSI (tr|G7YUK2) DNA-directed RNA polymerase III subunit... 66 4e-09
Q2FPF9_METHJ (tr|Q2FPF9) DNA-directed RNA polymerase subunit OS=... 66 4e-09
L8G5K8_GEOD2 (tr|L8G5K8) DNA-directed RNA polymerase subunit OS=... 66 6e-09
A6UTI3_META3 (tr|A6UTI3) DNA-directed RNA polymerase subunit OS=... 65 6e-09
J3KC97_COCIM (tr|J3KC97) DNA-directed RNA polymerase subunit OS=... 65 6e-09
E9D0E0_COCPS (tr|E9D0E0) DNA-directed RNA polymerase subunit OS=... 65 6e-09
C5P9J4_COCP7 (tr|C5P9J4) DNA-directed RNA polymerase subunit OS=... 65 6e-09
C5FE71_ARTOC (tr|C5FE71) DNA-directed RNA polymerase subunit OS=... 65 7e-09
M0ECZ5_9EURY (tr|M0ECZ5) DNA-directed RNA polymerase subunit OS=... 65 7e-09
M0DJJ9_9EURY (tr|M0DJJ9) DNA-directed RNA polymerase subunit OS=... 65 8e-09
A5UMY1_METS3 (tr|A5UMY1) DNA-directed RNA polymerase subunit OS=... 65 8e-09
R7PXA5_9EURY (tr|R7PXA5) DNA-directed RNA polymerase subunit OS=... 65 8e-09
D2ZNN1_METSM (tr|D2ZNN1) DNA-directed RNA polymerase subunit OS=... 65 8e-09
B9AFZ6_METSM (tr|B9AFZ6) DNA-directed RNA polymerase subunit OS=... 65 8e-09
Q4WJD3_ASPFU (tr|Q4WJD3) DNA-directed RNA polymerase subunit OS=... 65 9e-09
B0XPK1_ASPFC (tr|B0XPK1) DNA-directed RNA polymerase subunit OS=... 65 9e-09
I7ALY3_ENCRO (tr|I7ALY3) DNA-directed RNA polymerase subunit OS=... 65 1e-08
Q9P9I8_METTL (tr|Q9P9I8) DNA-directed RNA polymerase subunit OS=... 65 1e-08
F6BCY6_METIK (tr|F6BCY6) DNA-directed RNA polymerase subunit OS=... 65 1e-08
L0AE72_NATGS (tr|L0AE72) DNA-directed RNA polymerase subunit OS=... 65 1e-08
I6TTN5_ENCHA (tr|I6TTN5) DNA-directed RNA polymerase subunit OS=... 65 1e-08
C9RF97_METVM (tr|C9RF97) DNA-directed RNA polymerase subunit OS=... 65 1e-08
Q3IUA8_NATPD (tr|Q3IUA8) DNA-directed RNA polymerase subunit OS=... 65 1e-08
A1CR48_ASPCL (tr|A1CR48) DNA-directed RNA polymerase subunit OS=... 65 1e-08
E4XP03_OIKDI (tr|E4XP03) DNA-directed RNA polymerase subunit OS=... 64 2e-08
F9WXX8_MYCGM (tr|F9WXX8) DNA-directed RNA polymerase subunit OS=... 64 2e-08
M0MZV7_9EURY (tr|M0MZV7) DNA-directed RNA polymerase subunit OS=... 64 2e-08
B6H1G4_PENCW (tr|B6H1G4) DNA-directed RNA polymerase subunit OS=... 64 2e-08
K1P7B7_CRAGI (tr|K1P7B7) DNA-directed RNA polymerase subunit OS=... 64 2e-08
L9YB54_9EURY (tr|L9YB54) DNA-directed RNA polymerase subunit OS=... 64 2e-08
A7EJA6_SCLS1 (tr|A7EJA6) DNA-directed RNA polymerase subunit OS=... 64 2e-08
C1GU30_PARBA (tr|C1GU30) DNA-directed RNA polymerase subunit OS=... 64 2e-08
H3ZPL5_THELI (tr|H3ZPL5) DNA-directed RNA polymerase subunit OS=... 64 2e-08
D3BBD7_POLPA (tr|D3BBD7) DNA-directed RNA polymerase subunit OS=... 64 2e-08
B6YVY9_THEON (tr|B6YVY9) DNA-directed RNA polymerase subunit OS=... 64 2e-08
M7TBG1_9PEZI (tr|M7TBG1) Putative dna-directed rna polymerase ii... 64 2e-08
A8WJ33_CAEBR (tr|A8WJ33) Protein CBG23695 OS=Caenorhabditis brig... 64 2e-08
M0A5K9_9EURY (tr|M0A5K9) DNA-directed RNA polymerase subunit OS=... 64 2e-08
B2VRT8_PYRTR (tr|B2VRT8) DNA-directed RNA polymerase subunit OS=... 64 2e-08
L9ZV60_9EURY (tr|L9ZV60) DNA-directed RNA polymerase subunit OS=... 64 2e-08
M7TGI2_BOTFU (tr|M7TGI2) Putative dna-directed rna polymerase ii... 63 3e-08
G2XW52_BOTF4 (tr|G2XW52) DNA-directed RNA polymerase subunit OS=... 63 3e-08
F7PGJ7_9EURY (tr|F7PGJ7) DNA-directed RNA polymerase subunit OS=... 63 3e-08
E7QTA2_9EURY (tr|E7QTA2) DNA-directed RNA polymerase subunit OS=... 63 3e-08
B6HSN1_PENCW (tr|B6HSN1) DNA-directed RNA polymerase subunit OS=... 63 4e-08
J1L530_9EURY (tr|J1L530) DNA-directed RNA polymerase subunit OS=... 63 4e-08
L2GTY1_VAVCU (tr|L2GTY1) DNA-directed RNA polymerase subunit OS=... 63 4e-08
F3KLU9_9ARCH (tr|F3KLU9) DNA-directed RNA polymerase subunit OS=... 63 5e-08
F2KPJ6_ARCVS (tr|F2KPJ6) DNA-directed RNA polymerase subunit OS=... 62 5e-08
K0B9Q3_9ARCH (tr|K0B9Q3) DNA-directed RNA polymerase subunit OS=... 62 5e-08
M5FQ66_DACSP (tr|M5FQ66) DNA-directed RNA polymerase polypeptide... 62 6e-08
Q7SF80_NEUCR (tr|Q7SF80) DNA-directed RNA polymerase subunit OS=... 62 6e-08
I3EP58_NEMP1 (tr|I3EP58) DNA-directed RNA polymerase subunit OS=... 62 6e-08
I3EGC1_NEMP3 (tr|I3EGC1) DNA-directed RNA polymerase subunit OS=... 62 6e-08
I3REL1_9EURY (tr|I3REL1) DNA-directed RNA polymerase subunit OS=... 62 6e-08
B6Q634_PENMQ (tr|B6Q634) DNA-directed RNA polymerase subunit OS=... 62 6e-08
K9G9J0_PEND2 (tr|K9G9J0) DNA-directed RNA polymerase subunit OS=... 62 6e-08
K9FG47_PEND1 (tr|K9FG47) DNA-directed RNA polymerase subunit OS=... 62 6e-08
D8J8B0_HALJB (tr|D8J8B0) DNA-directed RNA polymerase subunit OS=... 62 6e-08
L9VK62_9EURY (tr|L9VK62) DNA-directed RNA polymerase subunit OS=... 62 7e-08
A6UQ74_METVS (tr|A6UQ74) DNA-directed RNA polymerase subunit OS=... 62 7e-08
A2RAZ1_ASPNC (tr|A2RAZ1) DNA-directed RNA polymerase subunit OS=... 62 7e-08
E3S649_PYRTT (tr|E3S649) DNA-directed RNA polymerase subunit OS=... 62 7e-08
M0DL11_9EURY (tr|M0DL11) DNA-directed RNA polymerase subunit OS=... 62 7e-08
A3CVC4_METMJ (tr|A3CVC4) DNA-directed RNA polymerase subunit OS=... 62 7e-08
M0LYA1_9EURY (tr|M0LYA1) DNA-directed RNA polymerase subunit OS=... 62 7e-08
D3SZP8_NATMM (tr|D3SZP8) DNA-directed RNA polymerase subunit OS=... 62 7e-08
L0HJ08_METFS (tr|L0HJ08) DNA-directed RNA polymerase subunit OS=... 62 8e-08
A1D3Y9_NEOFI (tr|A1D3Y9) DNA-directed RNA polymerase subunit (Fr... 62 8e-08
I6UYQ0_9EURY (tr|I6UYQ0) DNA-directed RNA polymerase subunit OS=... 62 8e-08
D4GXU9_HALVD (tr|D4GXU9) DNA-directed RNA polymerase subunit OS=... 62 8e-08
M0GG85_9EURY (tr|M0GG85) DNA-directed RNA polymerase subunit OS=... 62 8e-08
E3QVT0_COLGM (tr|E3QVT0) DNA-directed RNA polymerase subunit OS=... 62 9e-08
M0M978_HALMO (tr|M0M978) DNA-directed RNA polymerase subunit OS=... 62 9e-08
F2TJD9_AJEDA (tr|F2TJD9) DNA-directed RNA polymerase subunit OS=... 62 1e-07
C5JU87_AJEDS (tr|C5JU87) DNA-directed RNA polymerase subunit OS=... 62 1e-07
B8M829_TALSN (tr|B8M829) DNA-directed RNA polymerase subunit OS=... 62 1e-07
D5E9S0_METMS (tr|D5E9S0) DNA-directed RNA polymerase subunit OS=... 61 1e-07
A7I6R8_METB6 (tr|A7I6R8) DNA-directed RNA polymerase subunit OS=... 61 1e-07
H2NPI1_PONAB (tr|H2NPI1) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0HQP9_9EURY (tr|M0HQP9) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0HCE8_9EURY (tr|M0HCE8) DNA-directed RNA polymerase subunit OS=... 61 1e-07
L0AB18_CALLD (tr|L0AB18) DNA-directed RNA polymerase subunit OS=... 61 1e-07
B8CB14_THAPS (tr|B8CB14) DNA-directed RNA polymerase subunit OS=... 61 1e-07
F8AN12_METOI (tr|F8AN12) DNA-directed RNA polymerase subunit OS=... 61 1e-07
A9A2X5_NITMS (tr|A9A2X5) DNA-directed RNA polymerase subunit OS=... 61 1e-07
E4ZJH1_LEPMJ (tr|E4ZJH1) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0LID9_9EURY (tr|M0LID9) DNA-directed RNA polymerase subunit OS=... 61 1e-07
G3HVU7_CRIGR (tr|G3HVU7) DNA-directed RNA polymerase subunit OS=... 61 1e-07
H6Q6Y8_PYROT (tr|H6Q6Y8) DNA-directed RNA polymerase subunit OS=... 61 1e-07
A4WLS3_PYRAR (tr|A4WLS3) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0FQ77_9EURY (tr|M0FQ77) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0PGM0_9EURY (tr|M0PGM0) DNA-directed RNA polymerase subunit OS=... 61 1e-07
M0BP06_9EURY (tr|M0BP06) DNA-directed RNA polymerase subunit OS=... 61 2e-07
F8DBK9_HALXS (tr|F8DBK9) DNA-directed RNA polymerase subunit OS=... 61 2e-07
C9SAW1_VERA1 (tr|C9SAW1) DNA-directed RNA polymerase subunit OS=... 61 2e-07
C7NPX2_HALUD (tr|C7NPX2) DNA-directed RNA polymerase subunit OS=... 61 2e-07
E5R3E2_ARTGP (tr|E5R3E2) DNA-directed RNA polymerase subunit OS=... 61 2e-07
L0HNG4_ACIS0 (tr|L0HNG4) DNA-directed RNA polymerase subunit OS=... 61 2e-07
L9ZW16_9EURY (tr|L9ZW16) DNA-directed RNA polymerase subunit OS=... 61 2e-07
H1KZD4_9EURY (tr|H1KZD4) DNA-directed RNA polymerase subunit OS=... 61 2e-07
A8AAT2_IGNH4 (tr|A8AAT2) DNA-directed RNA polymerase subunit OS=... 60 2e-07
L9YKX4_9EURY (tr|L9YKX4) DNA-directed RNA polymerase subunit OS=... 60 2e-07
Q8SSB3_ENCCU (tr|Q8SSB3) DNA-directed RNA polymerase subunit OS=... 60 2e-07
M1K9M8_ENCCN (tr|M1K9M8) DNA-directed RNA polymerase subunit OS=... 60 2e-07
Q9UYX7_PYRAB (tr|Q9UYX7) DNA-directed RNA polymerase subunit OS=... 60 2e-07
I3R4K9_HALMT (tr|I3R4K9) DNA-directed RNA polymerase subunit OS=... 60 2e-07
L9YW38_9EURY (tr|L9YW38) DNA-directed RNA polymerase subunit OS=... 60 2e-07
L0KXK5_METHD (tr|L0KXK5) DNA-directed RNA polymerase subunit OS=... 60 2e-07
B1L5R4_KORCO (tr|B1L5R4) DNA-directed RNA polymerase subunit OS=... 60 2e-07
F0LIX1_THEBM (tr|F0LIX1) DNA-directed RNA polymerase subunit OS=... 60 2e-07
L9ZUM3_9EURY (tr|L9ZUM3) DNA-directed RNA polymerase subunit OS=... 60 2e-07
Q8U264_PYRFU (tr|Q8U264) DNA-directed RNA polymerase subunit OS=... 60 3e-07
L0JQX0_NATP1 (tr|L0JQX0) DNA-directed RNA polymerase subunit OS=... 60 3e-07
Q387Z6_TRYB2 (tr|Q387Z6) DNA-directed RNA polymerase subunit OS=... 60 3e-07
D0A0I3_TRYB9 (tr|D0A0I3) DNA-directed RNA polymerase subunit OS=... 60 3e-07
Q4CWD9_TRYCC (tr|Q4CWD9) DNA-directed RNA polymerase subunit OS=... 60 3e-07
Q6LXC3_METMP (tr|Q6LXC3) DNA-directed RNA polymerase subunit OS=... 60 3e-07
G0H2H5_METMI (tr|G0H2H5) DNA-directed RNA polymerase subunit OS=... 60 3e-07
Q9Y1T9_GIAIN (tr|Q9Y1T9) Transcription factor IIS homolog (Fragm... 60 3e-07
Q2NE53_METST (tr|Q2NE53) DNA-directed RNA polymerase subunit OS=... 60 3e-07
D5TZM3_THEAM (tr|D5TZM3) DNA-directed RNA polymerase subunit OS=... 60 3e-07
C0S3L8_PARBP (tr|C0S3L8) DNA-directed RNA polymerase subunit OS=... 60 3e-07
M8AIA0_TRIUA (tr|M8AIA0) Uncharacterized protein OS=Triticum ura... 60 3e-07
Q9HS34_HALSA (tr|Q9HS34) DNA-directed RNA polymerase subunit OS=... 60 3e-07
B0R3C1_HALS3 (tr|B0R3C1) DNA-directed RNA polymerase subunit OS=... 60 3e-07
B1YAF4_PYRNV (tr|B1YAF4) DNA-directed RNA polymerase subunit OS=... 60 3e-07
M0AJA6_NATA1 (tr|M0AJA6) DNA-directed RNA polymerase subunit OS=... 60 3e-07
L9XKM2_9EURY (tr|L9XKM2) DNA-directed RNA polymerase subunit OS=... 60 3e-07
F9CUG6_9ARCH (tr|F9CUG6) DNA-directed RNA polymerase subunit OS=... 60 3e-07
L2FXQ2_COLGN (tr|L2FXQ2) DNA-directed RNA polymerase subunit OS=... 60 4e-07
E1ZP68_CHLVA (tr|E1ZP68) Putative uncharacterized protein OS=Chl... 60 4e-07
K0BF27_9ARCH (tr|K0BF27) DNA-directed RNA polymerase subunit OS=... 59 4e-07
G3B174_CANTC (tr|G3B174) DNA-directed RNA polymerase subunit OS=... 59 4e-07
D2RPX2_HALTV (tr|D2RPX2) DNA-directed RNA polymerase subunit OS=... 59 4e-07
M0BQA2_9EURY (tr|M0BQA2) DNA-directed RNA polymerase subunit OS=... 59 4e-07
G0U4P5_TRYVY (tr|G0U4P5) DNA-directed RNA polymerase subunit OS=... 59 4e-07
Q4DC35_TRYCC (tr|Q4DC35) DNA-directed RNA polymerase subunit OS=... 59 4e-07
M0BDK6_9EURY (tr|M0BDK6) DNA-directed RNA polymerase subunit OS=... 59 4e-07
G0EET8_PYRF1 (tr|G0EET8) DNA-directed RNA polymerase subunit OS=... 59 4e-07
O58397_PYRHO (tr|O58397) DNA-directed RNA polymerase subunit OS=... 59 5e-07
A5DAY3_PICGU (tr|A5DAY3) DNA-directed RNA polymerase subunit OS=... 59 5e-07
>I3SSH7_LOTJA (tr|I3SSH7) DNA-directed RNA polymerase subunit OS=Lotus japonicus
PE=3 SV=1
Length = 111
Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/111 (99%), Positives = 110/111 (99%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD
Sbjct: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKN PTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED
Sbjct: 61 MKNGPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
>I1N2G1_SOYBN (tr|I1N2G1) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=2
Length = 111
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCPSC NML++ELP MG SR FC CPYVC+IE V+IKRKQRLVRKEI+P+ S DD
Sbjct: 1 MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFSEDD 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M NAP+TE CP C H KAA+ E Q RSADEPAT+FY CLN C+ QWRE
Sbjct: 61 MTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWREG 111
>F6I6G3_VITVI (tr|F6I6G3) DNA-directed RNA polymerase subunit OS=Vitis vinifera
GN=VIT_15s0046g00090 PE=3 SV=1
Length = 111
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 88/111 (79%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N L++ELP+MG +R FC TCPYVC+IE VKIKRKQRLV+KEI+P+ S DD
Sbjct: 1 MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKN PTT+ CP+C+ KA + ++Q RSADEP + FYWCLNE C QWRED
Sbjct: 61 MKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111
>I1KJX9_SOYBN (tr|I1KJX9) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 111
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 84/111 (75%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C NML++ELP MG SR FC CPYVC IE V+IKRKQRLV KEI+P+ S DD
Sbjct: 1 MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M NA +TE CP C H KAA+ E Q RSADEPAT+FY CLN +C+ QWRE
Sbjct: 61 MTNAASTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNECKKQWREG 111
>C6T364_SOYBN (tr|C6T364) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 111
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 83/111 (74%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C NML++ELP MG SR FC CPYVC IE V+IKRKQRLV KEI+P+ S DD
Sbjct: 1 MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M NA +TE CP C H KAA+ E Q RSAD PAT+FY CLN +C+ QWRE
Sbjct: 61 MTNAASTEATCPFCGHGKAAFKEFQTRSADGPATLFYKCLNNECKKQWREG 111
>B9SBZ2_RICCO (tr|B9SBZ2) DNA-directed RNA polymerase subunit OS=Ricinus communis
GN=RCOM_0700890 PE=3 SV=1
Length = 112
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C +L++ELPNMG ++R +C TCPYVC IE VKIKRKQ+L++KEI+PV + DD
Sbjct: 1 MEFCPTCGVLLRYELPNMGQSARFYCSTCPYVCSIESRVKIKRKQQLIKKEIEPVFTLDD 60
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK TE CP+C+ +A + +QIRSADEPAT FY+CLNEKC WRE+
Sbjct: 61 MMKGGSETEATCPHCNFGRARFQSLQIRSADEPATTFYFCLNEKCSRVWREE 112
>B9I5C8_POPTR (tr|B9I5C8) DNA-directed RNA polymerase subunit OS=Populus
trichocarpa GN=POPTRDRAFT_772435 PE=3 SV=1
Length = 112
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C +L++E PNMG +R +C TCPY IE VKIKRKQ+L +KEI+P+ + +D
Sbjct: 1 MEFCPTCGMLLRYETPNMGQAARFYCPTCPYFASIESRVKIKRKQKLAKKEIEPIFTLED 60
Query: 61 MKNAPT-TEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK T+ CP+C+ +A + ++QIRSADEPAT FY+CLNEKC WRED
Sbjct: 61 MKTGGAETDATCPHCNFGRACFQQIQIRSADEPATTFYFCLNEKCGRMWRED 112
>K4C2R4_SOLLC (tr|K4C2R4) DNA-directed RNA polymerase subunit OS=Solanum
lycopersicum GN=Solyc05g055890.2 PE=3 SV=1
Length = 111
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
ME CP C +L++ELP+M +R FC CPYVC +E +K+KR+Q LV+K++DPVIS +D
Sbjct: 1 MEVCPDCGMLLQYELPHMDRPARFFCPACPYVCNLENRIKMKRRQPLVKKQMDPVISTED 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M NA T EV CP C + +AAY ++QIRSADEP T FY C N+ C + WRED
Sbjct: 61 MDNASTAEVPCPACGYREAAYYQVQIRSADEPMTTFYKCKNKLCGNNWRED 111
>G7KDT1_MEDTR (tr|G7KDT1) DNA-directed RNA polymerase subunit OS=Medicago
truncatula GN=MTR_5g030180 PE=3 SV=1
Length = 106
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 79/106 (74%), Gaps = 5/106 (4%)
Query: 10 MLKFELPNMGHN----SRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM-KNA 64
ML ELPN H+ +R +C TCPY+C IEKGVKIKR+Q LVRK IDP+IS+ ++ KN
Sbjct: 1 MLMLELPNSSHDKFHPTRFYCLTCPYICRIEKGVKIKRRQMLVRKGIDPIISHHEINKNK 60
Query: 65 PTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
P +V CPNC H +A+Y Q RSADEPATIFY CLNEKC H+W+E
Sbjct: 61 PKADVPCPNCRHPQASYHMQQTRSADEPATIFYECLNEKCGHKWKE 106
>M1C5M6_SOLTU (tr|M1C5M6) DNA-directed RNA polymerase subunit OS=Solanum
tuberosum GN=PGSC0003DMG402023468 PE=3 SV=1
Length = 111
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 81/111 (72%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
ME CP C +L++ELP+M +R FC CP+VC +E +K+K++Q LV+K++DPVIS +D
Sbjct: 1 MEVCPDCGMLLQYELPHMDRPARFFCPACPFVCNLENRLKMKKRQPLVKKQMDPVISTED 60
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M NA T EV CP C + +AAY ++QIRSADEP T FY C N+ C + WRED
Sbjct: 61 MDNASTAEVPCPACGYREAAYYQVQIRSADEPMTTFYKCKNKMCGNNWRED 111
>Q8LE40_ARATH (tr|Q8LE40) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana PE=2 SV=1
Length = 106
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++E G +SR FC TCPYV YIE+ V+IK+KQ LV+K I+PV++ DD
Sbjct: 1 MEFCPTCGNLLRYE---GGGSSRFFCSTCPYVAYIERRVEIKKKQLLVKKSIEPVVTKDD 57
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRSADEP + FY CL KC WRE+
Sbjct: 58 IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106
>R0I5V3_9BRAS (tr|R0I5V3) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10014975mg PE=4 SV=1
Length = 106
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++E G NSR FC TCPYV YIE+ V+IK+KQ LV+K I+PV++ D
Sbjct: 1 MEFCPTCGNLLRYE---GGGNSRFFCSTCPYVAYIERQVEIKKKQLLVKKSIEPVVTKAD 57
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRSADEP + FY CL KC WRE+
Sbjct: 58 IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106
>Q9LNK0_ARATH (tr|Q9LNK0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=F6F3.2 PE=3 SV=1
Length = 106
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++E G NSR FC TCPYV YI++ V+IK+KQ LV+K I+ V++ DD
Sbjct: 1 MEFCPTCGNLLRYE---GGGNSRFFCSTCPYVAYIQRQVEIKKKQLLVKKSIEAVVTKDD 57
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRSADEP + FY CL KC WRE+
Sbjct: 58 IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106
>D7KQA1_ARALL (tr|D7KQA1) DNA-directed RNA polymerase subunit OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_311313 PE=3 SV=1
Length = 106
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++E NSR FC TCPYV Y+E+ V+IK+KQ LV+K I+PV++ DD
Sbjct: 1 MEFCPTCGNLLRYE---GSGNSRFFCSTCPYVAYVERQVEIKKKQLLVKKSIEPVVTKDD 57
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRSADEP + FY CL KC WRE+
Sbjct: 58 IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCDFTWREE 106
>G7L310_MEDTR (tr|G7L310) DNA-directed RNA polymerase subunit OS=Medicago
truncatula GN=MTR_7g116750 PE=3 SV=1
Length = 108
Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 10 MLKFELPN-----MGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM-KN 63
ML ELPN H +R +C TCPY+C I K VKIKR+Q LVRK IDP+IS+D++ KN
Sbjct: 1 MLMLELPNATSHGTSHPTRFYCLTCPYICPIRKEVKIKRRQMLVRKGIDPIISHDEINKN 60
Query: 64 APTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
P ++ CPNC H +A+Y Q RSADEPATIFY C+N+KC HQW+E
Sbjct: 61 KPKADIPCPNCRHPQASYHMEQTRSADEPATIFYKCMNQKCEHQWKE 107
>Q9ZQC0_ARATH (tr|Q9ZQC0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=F1K3.2 PE=3 SV=1
Length = 106
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++E G +SR FC TCPYV IE+ V+IK+KQ LV+K I+PV++ DD
Sbjct: 1 MEFCPTCGNLLRYE---GGGSSRFFCSTCPYVANIERRVEIKKKQLLVKKSIEPVVTKDD 57
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRSADEP + FY CL KC WRE+
Sbjct: 58 IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106
>M4EUZ2_BRARP (tr|M4EUZ2) DNA-directed RNA polymerase subunit OS=Brassica rapa
subsp. pekinensis GN=Bra032625 PE=3 SV=1
Length = 168
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++ S+ FC TCPY+ IE+ V+IK+KQ LV+K IDPV+ DD
Sbjct: 66 MEFCPTCGNLLRY------GQSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPVVKKDD 119
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ P TE CP C HDKA + MQIRSADEP + FY C+ KC WRE+
Sbjct: 120 IPKGPETEAPCPRCGHDKAYFKTMQIRSADEPESRFYRCV--KCEQTWREE 168
>M4E7L8_BRARP (tr|M4E7L8) DNA-directed RNA polymerase subunit OS=Brassica rapa
subsp. pekinensis GN=Bra024774 PE=3 SV=1
Length = 103
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 74/111 (66%), Gaps = 8/111 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++ S+ FC TCPYV IE+ V+IK+KQ LV+K IDPV+ DD
Sbjct: 1 MEFCPTCGNLLRY------GQSQFFCSTCPYVARIERQVEIKKKQLLVKKSIDPVVKKDD 54
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ P TE CP C HDKA + MQIRSADEP + FY C+ KC WRE+
Sbjct: 55 IPKGPETEAPCPRCGHDKAYFKTMQIRSADEPESRFYRCV--KCEQTWREE 103
>C5Y1A6_SORBI (tr|C5Y1A6) Putative uncharacterized protein Sb04g032090 OS=Sorghum
bicolor GN=Sb04g032090 PE=4 SV=1
Length = 166
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + H RLFC CPYVC I+ KI +K RLV+KE++P+ S D
Sbjct: 57 MEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQN--KIVKKARLVKKEVEPIFSTAD 114
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+MK+AP T V C C+H +A + +MQIRSADEP T Y C E+C+H+WRED
Sbjct: 115 EMKSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 166
>M4CR21_BRARP (tr|M4CR21) DNA-directed RNA polymerase subunit OS=Brassica rapa
subsp. pekinensis GN=Bra006662 PE=3 SV=1
Length = 103
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 8/111 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L++ S+ FC TCPY+ IE+ V+IK+KQ LV+K IDP + DD
Sbjct: 1 MEFCPTCGNLLRY------GQSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPDVKKDD 54
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ P TE CP C HDKA + MQIRSADEP + FY C+ KC WRE+
Sbjct: 55 IPKGPETEAPCPRCGHDKAYFKTMQIRSADEPESRFYRCV--KCEQTWREE 103
>K3YWX1_SETIT (tr|K3YWX1) DNA-directed RNA polymerase subunit OS=Setaria italica
GN=Si018767m.g PE=3 SV=1
Length = 110
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCPSC +L+ + H RLFC CPYVC I+ KI RK +LV+KE++P+ S D
Sbjct: 1 MEFCPSCGLLLQIDPGTGSHRLRLFCPLCPYVCAIQN--KIVRKAKLVKKEVEPIFSNAD 58
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK AP T CP C+H +A + +MQIRSADEP T FY C E+C+ +WR+D
Sbjct: 59 AMKLAPKTATSCPRCNHGEAYFKQMQIRSADEPMTTFYRCCREECQLEWRDD 110
>B4FDM3_MAIZE (tr|B4FDM3) DNA-directed RNA polymerase subunit OS=Zea mays
GN=ZEAMMB73_646152 PE=3 SV=1
Length = 110
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + H RLFC CPYVC I KI +K RLV+KE++P+ S D
Sbjct: 1 MEFCPVCGILLQIDPGTGSHRLRLFCPVCPYVCPILN--KIVKKARLVKKEVEPISSTAD 58
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+MK+AP T V C C+H +A + +MQIRSADEP T Y C E+C+H+WRED
Sbjct: 59 EMKSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 110
>J3LFS4_ORYBR (tr|J3LFS4) DNA-directed RNA polymerase subunit OS=Oryza
brachyantha GN=OB02G34910 PE=3 SV=1
Length = 110
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M+FCP+C +L+ + G+ R FC TCPYVC + KI +K RLV+KE++P+ S DD
Sbjct: 1 MDFCPACGMLLQIQPATGGNRMRFFCPTCPYVCPVRN--KIVKKARLVKKEVEPIFSGDD 58
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK AP T CP C + +A + +MQIRSADEP T FY C N C+ QWR+D
Sbjct: 59 AMKLAPKTATSCPRCYNGEAYFKQMQIRSADEPMTTFYKCCNGNCQFQWRDD 110
>Q6EU09_ORYSJ (tr|Q6EU09) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=OJ1493_H11.21 PE=3 SV=1
Length = 110
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + G+ R +C TCPYVC ++ KI +K RLV+KE++P+ S D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKN--KIVKKARLVKKEVEPIFSDSD 58
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKNAP T CP C + +A Y +MQIRSADEP + FY C E+C+ WRED
Sbjct: 59 AMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 110
>I1P315_ORYGL (tr|I1P315) DNA-directed RNA polymerase subunit OS=Oryza glaberrima
PE=3 SV=1
Length = 110
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + G+ R +C TCPYVC ++ KI +K RLV+KE++P+ S D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKN--KIVKKARLVKKEVEPIFSDSD 58
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKNAP T CP C + +A Y +MQIRSADEP + FY C E+C+ WRED
Sbjct: 59 AMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 110
>M0STF8_MUSAM (tr|M0STF8) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 110
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C N+L+ E G R FC TCPYVC + KI +KQ L +KE++ + S D
Sbjct: 1 MEFCPMCGNLLQIEPAGSGRRLRFFCPTCPYVCPVTN--KIVKKQHLAKKELETIFSGAD 58
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK AP T CP C + +A + +MQIRSADEP T FY C N+ C+H+WR+D
Sbjct: 59 AMKFAPKTATTCPRCHNGEAFFRQMQIRSADEPMTTFYKCCNDNCQHEWRDD 110
>B9F1L5_ORYSJ (tr|B9F1L5) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=OsJ_07898 PE=2 SV=1
Length = 106
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + G+ R +C TCPYVC I K K RLV+KE++P+ S D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPIVK------KARLVKKEVEPIFSDSD 54
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKNAP T CP C + +A Y +MQIRSADEP + FY C E+C+ WRED
Sbjct: 55 AMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 106
>A2X876_ORYSI (tr|A2X876) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. indica GN=OsI_08435 PE=2 SV=1
Length = 106
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP C +L+ + G+ R +C TCPYVC I K K RLV+KE++P+ S D
Sbjct: 1 MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPIVK------KARLVKKEVEPIFSDSD 54
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MKNAP T CP C + +A Y +MQIRSADEP + FY C E+C+ WRED
Sbjct: 55 AMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 106
>D5AAK0_PICSI (tr|D5AAK0) DNA-directed RNA polymerase subunit OS=Picea sitchensis
PE=3 SV=1
Length = 110
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
MEFCP+C N+L+ E P M + R FC TCPYV IE+ KI +K +L +KE+D V ++
Sbjct: 1 MEFCPTCGNLLQIEHPYMSQSLRFFCPTCPYVFPIER--KISKKLQLKKKEVDDVFGGEE 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN TE CP CS KA + ++QIRSADEP + FY C N +C+ +WR+D
Sbjct: 59 AWKNVDRTEATCPKCSFGKAFFMQIQIRSADEPMSTFYKCCNNQCQFRWRQD 110
>R0I784_9BRAS (tr|R0I784) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10015575mg PE=4 SV=1
Length = 102
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 9/111 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C N+L++E G NSR FC +CPY+ YI++ +KQ LV+K I+ V+S +D
Sbjct: 1 MIFCPTCGNLLRYE---GGGNSRFFCSSCPYIAYIKR----HKKQLLVKKSIEHVVSKED 53
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A TE CP C HDKA + MQIRS DEP + FY CL KC WRE+
Sbjct: 54 IPTAAETEAPCPRCGHDKACFKSMQIRSGDEPESRFYRCL--KCEFTWREE 102
>M0RQV6_MUSAM (tr|M0RQV6) DNA-directed RNA polymerase subunit OS=Musa acuminata
subsp. malaccensis PE=3 SV=1
Length = 103
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 10/112 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
MEFCP+C +L+ E + G RLFC TCPY+ K LV+KE++ + S D
Sbjct: 1 MEFCPTCGMLLQIERASQGRRCRLFCPTCPYMVI---------KHNLVKKELEHIFSGAD 51
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
MK AP T CP C H +A + +MQIRSADEP T FY C NE+C ++WR+D
Sbjct: 52 SMKFAPRTAATCPRCHHGEAFFRQMQIRSADEPMTTFYRCCNERCNYEWRDD 103
>A9SIZ2_PHYPA (tr|A9SIZ2) DNA-directed RNA polymerase subunit OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_185465 PE=3 SV=1
Length = 110
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M+FCP+C+N+L E P+MG R FC TCPYV +++ KI +K +L +KE+D V+ +D
Sbjct: 1 MDFCPTCANLLLVENPSMGRPLRYFCPTCPYVYVVDR--KISKKLKLKKKEVDDVLGGED 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN T V CPNCS+ +A + ++QIRSADEP T FY C N C H+W+E+
Sbjct: 59 AWKNVDRTTVTCPNCSYGQAYFMQIQIRSADEPMTTFYKCCNIDCNHRWKEN 110
>R1F6R9_EMIHU (tr|R1F6R9) Uncharacterized protein OS=Emiliania huxleyi CCMP1516
GN=EMIHUDRAFT_63678 PE=4 SV=1
Length = 106
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C +ML+ E ++ R FCQTCPYV + ++K + L RKE+D V+ D
Sbjct: 1 MHFCPHCGSMLQLE--SISDRLRFFCQTCPYVHQLT--TRVKSEMLLDRKEVDDVLGGPD 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KNA + CP CSH +A Y ++QIRSADEP T FY C+ +C H+WRED
Sbjct: 57 AWKNADQADASCPRCSHHRAYYQQLQIRSADEPMTTFYKCV--ECGHRWRED 106
>A8I4N7_CHLRE (tr|A8I4N7) DNA-directed RNA polymerase subunit OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_76582 PE=3 SV=1
Length = 109
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ +CP+C+NML EL R FCQ CPYV I+K KI + L RK++D V+ +D
Sbjct: 2 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYNIDK--KISKMAPLARKQVDDVLGGED 59
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T+ CP CS+ +A + E+Q RSADEPAT+F+ C+ +C H+WRE
Sbjct: 60 AWKNVAKTDATCPKCSYHQAYFMEIQTRSADEPATLFFKCV--QCAHRWRE 108
>F0WLX9_9STRA (tr|F0WLX9) DNA-directed RNA polymerase subunit OS=Albugo laibachii
Nc14 GN=AlNc14C150G7492 PE=3 SV=1
Length = 105
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCPSC+N+L E PN R FCQTCPY+ IE +I++ +L RK++D V+ D+
Sbjct: 1 MHFCPSCANLLLVE-PN-SEGMRFFCQTCPYLYQIES--RIEKHVQLQRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N TEVRCP+C H+ A + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWDNVDQTEVRCPHCEHNHAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>H3G9I1_PHYRM (tr|H3G9I1) DNA-directed RNA polymerase subunit OS=Phytophthora
ramorum PE=3 SV=1
Length = 105
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M+FCPSC N+L E + G R FCQTCPY+ I K+++K L RK++D V+ D+
Sbjct: 1 MQFCPSCGNILLVEPDSDGM--RFFCQTCPYLFQIND--KVEKKVPLQRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N TE RCP+C H KA + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWENVDQTETRCPHCEHTKAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>I4YE70_WALSC (tr|I4YE70) DNA-directed RNA polymerase subunit OS=Wallemia sebi
(strain ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_17028
PE=3 SV=1
Length = 110
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+CSNML +L N++ C CPY + K + + +L RK++D V+ +D
Sbjct: 1 MLFCPTCSNMLISQLDEESTNNKWVCAICPYQFPMTK--QFNTRHKLKRKQVDDVLGGED 58
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN T CP CS+ +A + ++QIRSADEP T FY C N KC +QWRE+
Sbjct: 59 SWKNVDQTSAECPKCSNGRAFFMQIQIRSADEPMTTFYRCTNAKCANQWREN 110
>D8TKW2_VOLCA (tr|D8TKW2) DNA-directed RNA polymerase subunit OS=Volvox carteri
GN=VOLCADRAFT_56639 PE=3 SV=1
Length = 109
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ +CP+C+NML EL R FCQ CPYV I+K KI + L RK++D V+ DD
Sbjct: 2 ITYCPTCANMLLVELTEYSKELRYFCQCCPYVYSIDK--KISKMAPLARKQVDDVLGGDD 59
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T+ C C++ +A + E+Q RSADEPAT+F+ C+ +C ++WRE
Sbjct: 60 AWKNVAKTDATCSKCAYHQAYFMEIQTRSADEPATLFFKCV--QCGYRWRE 108
>K3WD54_PYTUL (tr|K3WD54) DNA-directed RNA polymerase subunit OS=Pythium ultimum
GN=PYU1_G002892 PE=3 SV=1
Length = 106
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCPSC N+L E G R FCQTCPY+ I+ K+++K L RK++D V+ DD
Sbjct: 1 MHFCPSCGNILLVEPDADGM--RFFCQTCPYLFQIDD--KVEKKVPLQRKQVDDVLGGDD 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N TE RCP+C KA + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWENVDQTETRCPHCEFTKAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>D0NTV1_PHYIT (tr|D0NTV1) DNA-directed RNA polymerase subunit OS=Phytophthora
infestans (strain T30-4) GN=PITG_16526 PE=3 SV=1
Length = 105
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 73/111 (65%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCPSC N+L E + G R FCQTCPY+ I K+++K L RK++D V+ D+
Sbjct: 1 MHFCPSCGNILLVEPDSDGM--RFFCQTCPYLFQIND--KVEKKVPLQRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N TE RCP+C ++KA + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWENVDQTETRCPHCEYNKAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>G4Z2Z6_PHYSP (tr|G4Z2Z6) DNA-directed RNA polymerase subunit OS=Phytophthora
sojae (strain P6497) GN=PHYSODRAFT_491179 PE=3 SV=1
Length = 105
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCPSC N+L E + G R FCQTCPY+ I K+++K L RK++D V+ D+
Sbjct: 1 MHFCPSCGNILLVEPDSDGM--RFFCQTCPYLFQIND--KVEKKVPLQRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N TE RCP+C +KA + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWENVDQTETRCPHCEFNKAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>F4NRP3_BATDJ (tr|F4NRP3) DNA-directed RNA polymerase subunit OS=Batrachochytrium
dendrobatidis (strain JAM81 / FGSC 10211)
GN=BATDEDRAFT_8263 PE=3 SV=1
Length = 106
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N+L + N G+ LFCQ+CPY+C +EK + ++ RK++D V +
Sbjct: 1 MYFCPQCANLLLIQAGNEGN--ELFCQSCPYICRVEK--SLNKRLVFTRKDVDDVFGGEG 56
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N T+ CP C H +A + ++QIRSADEP +IF+ C KC +QWRE
Sbjct: 57 SWENVDQTDATCPKCEHSRAFFMQIQIRSADEPMSIFFRCC--KCANQWRE 105
>L8GGG4_ACACA (tr|L8GGG4) DNA-directed RNA polymerase subunit OS=Acanthamoeba
castellanii str. Neff GN=ACA1_140560 PE=3 SV=1
Length = 107
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 9/111 (8%)
Query: 3 FCPSCSNMLKFELPNMGHNSRL--FCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
FCP C+N+L L G +RL FC TCPYV I++ KI +K L RK++D ++ +
Sbjct: 4 FCPYCANVL---LVEAGPENRLRFFCNTCPYVFGIDQ--KISKKAALERKQVDDILGDEV 58
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+NA TE +CP C HD+A + ++Q RSADEP++ FY C+ KC +W+ D
Sbjct: 59 FENAQQTEAKCPECGHDRANFFQLQTRSADEPSSTFYRCM--KCASKWKVD 107
>C5M563_CANTT (tr|C5M563) DNA-directed RNA polymerase subunit OS=Candida
tropicalis (strain ATCC MYA-3404 / T1) GN=CTRG_02041
PE=3 SV=1
Length = 111
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML N G N R +C TCPYV I G+++ +++L RKE+D V+ +
Sbjct: 2 LTFCPNCSNMLLINTGNDGLN-RFYCSTCPYVFKIS-GLQMYDRKKLHRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>I0YYJ1_9CHLO (tr|I0YYJ1) DNA-directed RNA polymerase subunit OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_28851 PE=3 SV=1
Length = 110
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C+N+L + +G + +CQ CPYV I++ +I R L +KE+D V+ +D
Sbjct: 6 FCPTCANLLFVKASEVG-DLVFYCQCCPYVYAIDR--QITRAVPLKKKEVDDVLGGEDAW 62
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T V CP C H A + E+Q RSADEPAT+F+ C EKC H WRE
Sbjct: 63 KNVQKTNVPCPKCGHTAAYFMEVQTRSADEPATLFFKC--EKCAHNWRE 109
>R9ASA2_WALIC (tr|R9ASA2) DNA-directed RNA polymerase III subunit RPC10
OS=Wallemia ichthyophaga EXF-994 GN=J056_003508 PE=4
SV=1
Length = 110
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+CSNML + N++ C CPY + K + K R RKE+D V+ ++
Sbjct: 1 MLFCPTCSNMLISAMDEETTNNKWTCSICPYQFPMTKQFNTRHKLR--RKEVDDVLGGEE 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T+ CP CS+ +A + ++QIRSADEP T FY C N KC +QWRE
Sbjct: 59 TWKNVDQTDAECPKCSNLRAFFMQIQIRSADEPMTTFYRCTNAKCANQWRE 109
>A5DDP4_PICGU (tr|A5DDP4) DNA-directed RNA polymerase subunit OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_01395 PE=3
SV=2
Length = 111
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CSNML G N RL+C TCPY I G+++ ++ L RK++D V+ D
Sbjct: 2 LSFCPYCSNMLLVGSSEDGCN-RLYCTTCPYEFKI-NGLQMYDRKNLSRKQVDDVLGGDG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+N T +CP +C DKA + ++QIRSADEP T FY C+ KC HQWRE+
Sbjct: 60 AWENVDQTAAQCPVDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCNHQWREN 111
>E6ZPD5_SPORE (tr|E6ZPD5) DNA-directed RNA polymerase subunit OS=Sporisorium
reilianum (strain SRZ2) GN=sr15548 PE=3 SV=1
Length = 109
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 72/112 (64%), Gaps = 4/112 (3%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N L +L + G N++ C TCPY I + ++ +Q L RKE+D V+ ++
Sbjct: 1 MLFCPTCANCLTIQLDDHG-NNKWSCHTCPYEFPIVR--QMTTRQHLKRKEVDDVMGGEE 57
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN +T+ CP C + KA + ++QIRSADEP T FY C N +C +QW+E+
Sbjct: 58 SWKNVDSTDAPCPKCENPKAFFMQLQIRSADEPMTTFYRCTNGQCAYQWKEN 109
>G3MN44_9ACAR (tr|G3MN44) DNA-directed RNA polymerase subunit OS=Amblyomma
maculatum PE=3 SV=1
Length = 108
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSN+L E R C TCPYVC I++ + ++ RL K++D V+
Sbjct: 2 LLFCPTCSNILIVE--EGSECFRFACNTCPYVCNIKQKMSSRKYPRL--KDVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP CSH++A + ++Q RSADEP T FY C N +C HQWR+
Sbjct: 58 AWENVDSTEEKCPKCSHERAYFMQIQTRSADEPMTTFYKCCNPQCGHQWRD 108
>M4B6F3_HYAAE (tr|M4B6F3) DNA-directed RNA polymerase subunit OS=Hyaloperonospora
arabidopsidis (strain Emoy2) PE=3 SV=1
Length = 105
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C N+L E + G R FCQTCPY+ I K+++K L RK++D V+ D+
Sbjct: 1 MHFCPCCGNILLVEPDSDG--MRFFCQTCPYLFQIHD--KVEKKVPLQRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N TE RCP+C KA + ++QIRSADEP+T FY C+ +C+ QW +
Sbjct: 57 AWENVDQTETRCPHCEFTKAYFMQIQIRSADEPSTTFYKCV--QCKKQWND 105
>C1DZH6_MICSR (tr|C1DZH6) DNA-directed RNA polymerase subunit OS=Micromonas sp.
(strain RCC299 / NOUM17) GN=MICPUN_78504 PE=3 SV=1
Length = 109
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G +L+CQTCPY I + I+ ++ RK++D V+ DD
Sbjct: 2 LSFCPHCANMLLVDHCPEGGGLKLYCQTCPYEHAITE--TIRDPIKIARKQVDDVLGGDD 59
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T CP C H +A + ++QIRSADEP + FY C KC +QWRE
Sbjct: 60 AWKNVDKTSATCPKCDHGQAYFMQIQIRSADEPMSTFYKCC--KCANQWRE 108
>B4MPJ2_DROWI (tr|B4MPJ2) DNA-directed RNA polymerase subunit OS=Drosophila
willistoni GN=Dwil\GK21590 PE=3 SV=1
Length = 108
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H+ L C TCPYV I + K RL KE+D V+
Sbjct: 4 FCPSCGNLLIIEEDTNSHH--LSCHTCPYVSKIRGKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH++A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPACSHNRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
>G8YFK6_PICSO (tr|G8YFK6) DNA-directed RNA polymerase subunit OS=Pichia
sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS
7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_002640 PE=3
SV=1
Length = 111
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C+NML + G N R C TCPY + G++I +++L RK +D V+ D
Sbjct: 2 LTFCPNCANMLVISSEDGGSN-RFQCLTCPYE-FRLSGMQIYDRKKLSRKTVDDVLGGDG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+N T+V+CP +C DKA + ++QIRSADEP T FY C+ KC H+WRE+
Sbjct: 60 AWENVDQTKVQCPVDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHKWREN 111
>C1MJC6_MICPC (tr|C1MJC6) DNA-directed RNA polymerase subunit OS=Micromonas
pusilla (strain CCMP1545) GN=MICPUCDRAFT_43884 PE=3 SV=1
Length = 113
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS----RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVI 56
+ FCPSC+NML G ++ +L CQTCPY + K ++ + RKE+D V+
Sbjct: 2 LTFCPSCANMLLVTTNAAGADASPCLKLICQTCPYAYDVTK--TLRDDVPVTRKEVDDVL 59
Query: 57 SYDDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
DD KN T CP C H +A + ++QIRSADEP + F+ C+ KC +QWRE
Sbjct: 60 GGDDAWKNVDKTAATCPKCDHGQAYFMQIQIRSADEPMSTFFKCV--KCGNQWRE 112
>Q6BMC8_DEBHA (tr|Q6BMC8) DNA-directed RNA polymerase subunit OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=DEHA2F06556g PE=3 SV=2
Length = 111
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G N R FC TCPY I+ G ++ +++L RKE+D V+ +
Sbjct: 2 LSFCPYCANMLIMAQKDDGCN-RFFCSTCPYEFKID-GFQMYDRKKLSRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC HQWRE+
Sbjct: 60 AWDNVDQTLAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCSHQWREN 111
>B4KR43_DROMO (tr|B4KR43) DNA-directed RNA polymerase subunit OS=Drosophila
mojavensis GN=Dmoj\GI19850 PE=3 SV=1
Length = 108
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YDDM 61
FCPSC N+L E H R C TCP++ I++ + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTSSH--RFTCNTCPFISKIKRKITTKTYPRL--KEVDHVLGGVAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP+CSH +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPSCSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
>H2Z908_CIOSA (tr|H2Z908) DNA-directed RNA polymerase subunit OS=Ciona savignyi
PE=3 SV=1
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E N + R C TCPYV I + KI KQ K +D V+
Sbjct: 2 LLFCPTCGNLLTVEEGNQCY--RFACPTCPYVHNITR--KISSKQFPKLKAVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP C H++A + ++Q RSADEP TIFY C N +C HQWRE
Sbjct: 58 AWENVDSTEEKCPKCEHNRAYFMQIQTRSADEPMTIFYKCCNPQCGHQWRE 108
>D3TLL1_GLOMM (tr|D3TLL1) DNA-directed RNA polymerase subunit OS=Glossina
morsitans morsitans PE=3 SV=1
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSN+L E N R C TCPY+ I K K RL KE+D V+
Sbjct: 2 LLFCPNCSNILLVE--QGVSNYRFSCNTCPYIFNISKKTSTKTFPRL--KEVDHVMGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH KA + +MQ RSADEP T FY C N+ C H WR+
Sbjct: 58 AWENVDSTDADCPACSHKKAYFMQMQTRSADEPMTTFYKCANQLCGHNWRD 108
>B3NJW4_DROER (tr|B3NJW4) DNA-directed RNA polymerase subunit OS=Drosophila
erecta GN=Dere\GG20841 PE=3 SV=1
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISAKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH +A + +MQ RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPTCSHKRAYFMQMQTRSADEPMTTFYKCCNHECNHTWRD 108
>E1ZHH3_CHLVA (tr|E1ZHH3) DNA-directed RNA polymerase subunit OS=Chlorella
variabilis GN=CHLNCDRAFT_24529 PE=3 SV=1
Length = 112
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 9/112 (8%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD-M 61
FCP+C N+L E N ++ C TC Y YI++ +I + L RKE++PV+ ++
Sbjct: 7 FCPTCGNLLLVE--NHNGENQFSCSTCCYQYYIDR--QITKGVPLQRKEVEPVLGGEEEW 62
Query: 62 KNAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KNAP TE RCP+ C H +A + E QIRSADEPAT+FY C KC WRE
Sbjct: 63 KNAPRTEARCPSDTCGHLQAYFKEAQIRSADEPATLFYRCA--KCGRNWREG 112
>B4ME99_DROVI (tr|B4ME99) DNA-directed RNA polymerase subunit OS=Drosophila
virilis GN=Dvir\GJ18820 PE=3 SV=1
Length = 108
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YDDM 61
FCPSC N+L E H R C TCP++ I++ + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTSSH--RFTCNTCPFISKIKRKISTKTYPRL--KEVDHVLGGVAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPACSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGHNWRD 108
>Q5A5N9_CANAL (tr|Q5A5N9) DNA-directed RNA polymerase subunit OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=RPC11 PE=3 SV=1
Length = 111
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML + G N R +C TCPY I G+++ +++L RKE+D V+ +
Sbjct: 2 LTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKIN-GLQMYDRKKLNRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>Q1RPU6_CIOIN (tr|Q1RPU6) DNA-directed RNA polymerase subunit OS=Ciona
intestinalis GN=Ci-RP-2 PE=3 SV=1
Length = 108
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E N + R C TCPYV I + + K+ +L K +D V+
Sbjct: 2 LLFCPTCGNLLTVEEGNQCY--RFACPTCPYVHNITQKISSKKFPKL--KAVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP C HD+A + ++Q RSADEP TIFY C + C HQWRE
Sbjct: 58 AWENVDSTEEKCPKCEHDRAYFMQIQTRSADEPMTIFYKCCSPTCGHQWRE 108
>I2FN36_USTH4 (tr|I2FN36) DNA-directed RNA polymerase subunit OS=Ustilago hordei
(strain Uh4875-4) GN=UHOR_06712 PE=3 SV=1
Length = 109
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N L +L + G N++ C TCPY I + ++ +Q L RKE+D V+ ++
Sbjct: 1 MLFCPTCANCLIIQLDDHG-NNKWSCHTCPYEFPIIQ--QMTTRQHLKRKEVDDVMGGEE 57
Query: 61 -MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN + + CP C + KA + ++QIRSADEP T FY C N +C +QWRE+
Sbjct: 58 SWKNVDSIDAPCPKCENPKAFFMQLQIRSADEPMTTFYRCTNGQCAYQWREN 109
>H9KBC5_APIME (tr|H9KBC5) DNA-directed RNA polymerase subunit OS=Apis mellifera
PE=3 SV=1
Length = 108
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L+ E G R C TCPYV IE+ + + +L KE+D V+ +
Sbjct: 2 LMFCPTCGNVLRVEEALAGL--RFACSTCPYVFNIERKLSSRTYPKL--KEVDDVLGGSE 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N +T+ RCP CSH +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 58 AWDNVDSTDERCPKCSHPRAYFMQIQTRSADEPMTTFYRCCNPQCAHNWRD 108
>H8X4D6_CANO9 (tr|H8X4D6) DNA-directed RNA polymerase subunit OS=Candida
orthopsilosis (strain 90-125) GN=CORT_0C07170 PE=3 SV=1
Length = 111
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CSNML P +N+R +C TCPY I G+ + +++L RKE+D V+ +
Sbjct: 2 LTFCPHCSNMLMIS-PGDDNNNRFYCSTCPYEFKI-AGLSMYDRKKLHRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>G8BK13_CANPC (tr|G8BK13) DNA-directed RNA polymerase subunit OS=Candida
parapsilosis (strain CDC 317 / ATCC MYA-4646)
GN=CPAR2_407830 PE=3 SV=1
Length = 111
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CSNML P +N+R +C TCPY I G+ + +++L RKE+D V+ +
Sbjct: 2 LTFCPHCSNMLMIS-PGDDNNNRFYCSTCPYEFKI-TGLSMYDRKKLHRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>B9WCW5_CANDC (tr|B9WCW5) DNA-directed RNA polymerase subunit OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=CD36_24590 PE=3 SV=1
Length = 111
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML + G N R +C TCPY I G+++ +++L RKE+D V+ +
Sbjct: 2 LTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKIN-GLQMYDRKKLHRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>A3LW94_PICST (tr|A3LW94) DNA-directed RNA polymerase subunit OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=RPC11 PE=3 SV=2
Length = 111
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML + G N R +C TCPY I G+ + +++L RKE+D V+ D
Sbjct: 2 LSFCPNCSNMLLISAGDDGCN-RFYCPTCPYEFKIN-GLSMFERKKLYRKEVDDVLGGDG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C +KA + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 60 AWDNVDQTSAQCPVDSCGGNKAYFFQLQIRSADEPMTTFYKCVN--CGHKWKEN 111
>K9HBK4_AGABB (tr|K9HBK4) DNA-directed RNA polymerase subunit OS=Agaricus
bisporus var. bisporus (strain H97 / ATCC MYA-4626 /
FGSC 10389) GN=AGABI2DRAFT_227329 PE=3 SV=1
Length = 106
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L + G+N + C TCPY I K ++ + RL RKE+D V+ D+
Sbjct: 1 MLFCPTCANLLVIS-SDTGYN-KWACNTCPYEFPITK--QMTTRTRLKRKEVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+A T+ C C+HD+A + ++QIRSADEP T FY C N C HQWRE+
Sbjct: 57 AWAHADQTQASCDKCNHDRAYFYQLQIRSADEPMTTFYRCTN--CTHQWREN 106
>K5WWE5_AGABU (tr|K5WWE5) DNA-directed RNA polymerase subunit OS=Agaricus
bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627
/ FGSC 10392) GN=AGABI1DRAFT_65164 PE=3 SV=1
Length = 106
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L + G+N + C TCPY I K ++ + RL RKE+D V+ D+
Sbjct: 1 MLFCPTCANLLVIS-SDTGYN-KWACNTCPYEFPITK--QMTTRTRLKRKEVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+A T+ C C+HD+A + ++QIRSADEP T FY C N C HQWRE+
Sbjct: 57 AWAHADQTQASCDKCNHDRAYFYQLQIRSADEPMTTFYRCTN--CTHQWREN 106
>B4PA35_DROYA (tr|B4PA35) DNA-directed RNA polymerase subunit OS=Drosophila
yakuba GN=Dyak\GE13781 PE=3 SV=1
Length = 108
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISAKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPTCSHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
>Q17L91_AEDAE (tr|Q17L91) DNA-directed RNA polymerase subunit OS=Aedes aegypti
GN=AAEL001400 PE=3 SV=1
Length = 108
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C N+L E G +S R C TCPY+C I++ + + +L KE+D V+
Sbjct: 2 LMFCPTCGNLLLVE---EGTDSLRFSCNTCPYICKIKRKISTRIYPKL--KEVDHVMGGA 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C+H++A + +MQ RSADEP T FY C N C H WRE
Sbjct: 57 AAWENVDSTDADCPACAHNRAYFMQMQTRSADEPMTTFYKCCNPTCGHNWRE 108
>C4YKX9_CANAW (tr|C4YKX9) DNA-directed RNA polymerase subunit OS=Candida albicans
(strain WO-1) GN=CAWG_06138 PE=3 SV=1
Length = 111
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML + G N R +C TCPY I G+++ +++L RK++D V+ +
Sbjct: 2 LTFCPNCSNMLLISAGDDGLN-RFYCSTCPYEFKIN-GLQMYDRKKLNRKQVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T FY C+ KC H+W+E+
Sbjct: 60 TWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCV--KCGHRWKEN 111
>E0VJY8_PEDHC (tr|E0VJY8) DNA-directed RNA polymerase subunit OS=Pediculus
humanus subsp. corporis GN=Phum_PHUM253550 PE=3 SV=1
Length = 108
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C+N+L E G S R C TCPY+ I + V + RL KE+D V+
Sbjct: 2 LLFCPTCANVLGVE---EGERSLRFACHTCPYIFNIARKVSSRYYPRL--KEVDDVLGGS 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE RCP CSH +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 57 AAWENVDSTEERCPKCSHSRAYFMQIQTRSADEPMTTFYKCCNPECGHRWRD 108
>B0D7I7_LACBS (tr|B0D7I7) DNA-directed RNA polymerase subunit OS=Laccaria bicolor
(strain S238N-H82 / ATCC MYA-4686) GN=LACBIDRAFT_318956
PE=3 SV=1
Length = 106
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L G+N + C TC Y I K ++ + RLVRK++D V+ D+
Sbjct: 1 MLFCPTCANLLVIS-SETGYN-KWACNTCAYEFPISK--QMTSRTRLVRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M +A T+ C C+HD+A + ++QIRSADEP T FY C + C HQWRE+
Sbjct: 57 MWAHADQTQASCDKCNHDQAYFYQLQIRSADEPMTTFYRCTS--CAHQWREN 106
>K8YVQ6_9STRA (tr|K8YVQ6) DNA-directed RNA polymerase subunit OS=Nannochloropsis
gaditana CCMP526 GN=RPC11 PE=3 SV=1
Length = 106
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M+FCP CSN+L EL N R CQTCPY+ I K KI + +L RKE+D V+ +D
Sbjct: 1 MKFCPICSNLLLVELGE--QNFRFCCQTCPYISVITK--KISKTMKLKRKEVDDVLGGED 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
A T CP C +A + +MQIRSADEP T FY C C ++W D
Sbjct: 57 AWAAADRTTTACPFCDSMEAFFVQMQIRSADEPMTTFYRC--TLCANRWSGD 106
>B0X903_CULQU (tr|B0X903) DNA-directed RNA polymerase subunit OS=Culex
quinquefasciatus GN=CpipJ_CPIJ015892 PE=3 SV=1
Length = 108
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C N+L E G +S R C TCPY+C I++ + + +L KE+D V+
Sbjct: 2 LMFCPTCGNLLLVE---EGTDSLRFSCNTCPYICKIKRKISTRIYPKL--KEVDHVMGGS 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C+H++A + +MQ RSADEP T FY C N C H WR+
Sbjct: 57 AAWENVDSTDADCPACAHNRAYFMQMQTRSADEPMTTFYKCANPVCGHNWRD 108
>C3KGN0_DROME (tr|C3KGN0) DNA-directed RNA polymerase subunit (Fragment)
OS=Drosophila melanogaster GN=CG33786-RA PE=2 SV=1
Length = 117
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 13 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISTKTFPRL--KEVDHVLGGKAAW 68
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C H +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 69 ENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 117
>J9I6L3_9SPIT (tr|J9I6L3) DNA-directed RNA polymerase subunit OS=Oxytricha
trifallax GN=OXYTRI_03087 PE=3 SV=1
Length = 106
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 9/113 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
M FCP+C+N+L L HN R FC+TCPYV +E+ ++K +L RKE+D V+
Sbjct: 1 MLFCPTCANLL---LIEKTHNDFRFFCKTCPYVFVVEQN--FEKKMQLERKEVDDVLGGK 55
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ +N E C C + +A + ++QIRSADEP T FY C KC +QWRE+
Sbjct: 56 EAWENVDQIEAECHKCGNRRAYFMQIQIRSADEPMTTFYKCT--KCSYQWREN 106
>B4QF36_DROSI (tr|B4QF36) DNA-directed RNA polymerase subunit OS=Drosophila
simulans GN=Dsim\GD25260 PE=3 SV=1
Length = 108
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C H +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
>A1ZBX4_DROME (tr|A1ZBX4) DNA-directed RNA polymerase subunit OS=Drosophila
melanogaster GN=CG33785 PE=3 SV=1
Length = 108
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C H +A + ++Q RSADEP T FY C N +C H WR+
Sbjct: 60 ENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
>A4RUS3_OSTLU (tr|A4RUS3) DNA-directed RNA polymerase subunit OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_34016 PE=3 SV=1
Length = 120
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 16/122 (13%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-----------RLFCQTCPYVCYIEKGVKIKRKQRLVR 49
+ FCP+C+N+L E ++ RL C +CPY + GVK + R +
Sbjct: 2 LTFCPTCANLLLLERGAADASTSGAGAGVGGAVRLRCASCPYAYDVVDGVKQRVDAR--K 59
Query: 50 KEIDPVISYDDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQW 108
K +D V+ DD +N T CP C+HD+A + ++QIRSADEP ++FY C+ KC QW
Sbjct: 60 KTVDDVLGGDDAWRNVDKTSATCPGCAHDEAYFMQIQIRSADEPMSVFYKCV--KCARQW 117
Query: 109 RE 110
RE
Sbjct: 118 RE 119
>K2G7P7_ENTNP (tr|K2G7P7) DNA-directed RNA polymerase subunit OS=Entamoeba
nuttalli (strain P19) GN=ENU1_164760 PE=3 SV=1
Length = 107
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCSTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>N9V9I9_ENTHI (tr|N9V9I9) RNA polymerase III subunit, putative OS=Entamoeba
histolytica HM-1:IMSS-A GN=EHI7A_016180 PE=4 SV=1
Length = 107
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCNTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>M7VYE8_ENTHI (tr|M7VYE8) RNA polymerase III subunit OS=Entamoeba histolytica
HM-3:IMSS GN=KM1_041050 PE=4 SV=1
Length = 107
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCNTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>M3S2V1_ENTHI (tr|M3S2V1) DNA-directed RNA polymerase subunit OS=Entamoeba
histolytica HM-1:IMSS-B GN=EHI8A_023550 PE=3 SV=1
Length = 107
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCNTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>M2R9L4_ENTHI (tr|M2R9L4) DNA-directed RNA polymerase subunit OS=Entamoeba
histolytica KU27 GN=EHI5A_033070 PE=3 SV=1
Length = 107
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCNTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>C4M8P1_ENTHI (tr|C4M8P1) DNA-directed RNA polymerase subunit OS=Entamoeba
histolytica GN=EHI_053450 PE=3 SV=1
Length = 107
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCNTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C H+ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>K5VY13_PHACS (tr|K5VY13) DNA-directed RNA polymerase subunit OS=Phanerochaete
carnosa (strain HHB-10118-sp) GN=PHACADRAFT_212338 PE=3
SV=1
Length = 106
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCPSC+N+L G+N + C TC Y I K ++ + RL RK++D V+ DD
Sbjct: 1 MLFCPSCANLLVISTET-GYN-KWACNTCAYEFPITK--QMTSRTRLERKQVDDVLGGDD 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M K+A +T CP C H +A + +QIRSADEP T F+ C C HQWRE+
Sbjct: 57 MWKHADSTAASCPKCDHGRAYFYMLQIRSADEPMTTFFRC--AACGHQWREN 106
>E2B7S8_HARSA (tr|E2B7S8) DNA-directed RNA polymerase subunit (Fragment)
OS=Harpegnathos saltator GN=EAI_08746 PE=3 SV=1
Length = 109
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CS++L E G R C TCP++ I KI + RKE V S D
Sbjct: 3 LRFCPKCSDLLSVEQGPTG--LRFACSTCPFIHNITH--KITTRTYYKRKEQVDVYSSDS 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+ T+ RCP CSH +A YT++Q RSADEP TIFY C + KC H WRE
Sbjct: 59 AWEGVDATDERCPRCSHPRAYYTQLQTRSADEPMTIFYKCCDPKCMHSWRE 109
>E9CFE9_CAPO3 (tr|E9CFE9) DNA-directed RNA polymerase subunit OS=Capsaspora
owczarzaki (strain ATCC 30864) GN=CAOG_06789 PE=3 SV=1
Length = 112
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD-D 60
FCP+CSN+L + +F C TCPYV ++ + R+ + +KE+D V+ + D
Sbjct: 4 FCPTCSNLLVAGTYQDSRENVMFRCATCPYVYQVQSMIGNMRE--MNKKEVDDVMGRESD 61
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ CP C H KA Y ++Q RSADEP TIF C N +C+H WR D
Sbjct: 62 WDNVDQTDANCPKCGHTKAYYRQVQTRSADEPMTIFLRCSNMECKHNWRGD 112
>K0KGM8_WICCF (tr|K0KGM8) DNA-directed RNA polymerase subunit OS=Wickerhamomyces
ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM
3599 / NBRC 0793 / NRRL Y-1031) GN=BN7_3867 PE=3 SV=1
Length = 111
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSNML + G + RL C TCPY I GV+I ++ L K+ID V+ D
Sbjct: 2 LSFCPNCSNMLLISTADTGIH-RLNCPTCPYEFPI-AGVEIFDRKELPTKQIDDVLGGDG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C +DKA + ++QIRSADEP T F C+ KC HQWRE+
Sbjct: 60 AWDNVDQTAAQCPIDSCGNDKAYFFQLQIRSADEPMTTFLKCV--KCGHQWREN 111
>C4Y9I4_CLAL4 (tr|C4Y9I4) DNA-directed RNA polymerase subunit OS=Clavispora
lusitaniae (strain ATCC 42720) GN=CLUG_04874 PE=3 SV=1
Length = 111
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 71/116 (61%), Gaps = 11/116 (9%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS--RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY 58
+ FCP CSNML L + G ++ RL+C TCPY I G ++ ++ L RK++D V+
Sbjct: 2 LSFCPYCSNML---LVSQGEDNCNRLYCPTCPYEFRI-SGFQMFERKMLPRKDVDDVLGG 57
Query: 59 DDM-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
D N T +CP +C +DKA + ++QIRSADEP T FY C KC HQWRE+
Sbjct: 58 DGAWDNVDQTAAQCPIDSCGNDKAYFFQLQIRSADEPMTTFYKC--TKCSHQWREN 111
>G0W4I0_NAUDC (tr|G0W4I0) DNA-directed RNA polymerase subunit OS=Naumovozyma
dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 /
NBRC 0211 / NRRL Y-12639) GN=NDAI0A05630 PE=3 SV=1
Length = 110
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITTADSGVYT-LTCRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKVQCPNYEKCGGESAYFFQLQIRSADEPMTTFYKCVN--CAHRWKEN 110
>K1QXT5_CRAGI (tr|K1QXT5) DNA-directed RNA polymerase subunit OS=Crassostrea
gigas GN=CGI_10028485 PE=3 SV=1
Length = 108
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C+N+L E G N R C TCPYV I++ + ++ +L KE+D V+
Sbjct: 2 LTFCPTCANVLVVE---EGQNCYRFACNTCPYVQNIQRKIASRKYPKL--KEVDDVLGGA 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE CP CSH++A + ++Q RSADEP T FY C N C H+WR+
Sbjct: 57 AAWENVDSTEETCPKCSHNRAFFMQIQTRSADEPMTTFYKCCNMACAHRWRD 108
>B4J958_DROGR (tr|B4J958) DNA-directed RNA polymerase subunit OS=Drosophila
grimshawi GN=Dgri\GH19894 PE=3 SV=1
Length = 108
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YDDM 61
FCPSC N+L E H R C TCP++ I++ + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTSSH--RFTCHTCPFISKIKRKITTKTFPRL--KEVDHVLGGIAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP CSH +A + ++Q RSADEP T FY C N +C + WR+
Sbjct: 60 ENVDSTDAECPACSHKRAYFMQIQTRSADEPMTTFYKCCNHQCGNTWRD 108
>L7M2H7_9ACAR (tr|L7M2H7) DNA-directed RNA polymerase subunit OS=Rhipicephalus
pulchellus PE=3 SV=1
Length = 108
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSN+L + G+ R C TCPYV I++ + ++ RL K++D V+
Sbjct: 2 LLFCPTCSNILIVQ--ESGNCYRFACNTCPYVHNIKQKMSNRKYPRL--KDVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP CSH +A + ++Q RSADEP T FY C + +C HQWR+
Sbjct: 58 AWENVDSTEEKCPKCSHGRAYFMQIQTRSADEPMTTFYKCCSPQCGHQWRD 108
>M5GFA2_DACSP (tr|M5GFA2) Uncharacterized protein OS=Dacryopinax sp. (strain DJM
731) GN=DACRYDRAFT_63561 PE=4 SV=1
Length = 108
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+CSN+L + G N + C TCPY I K ++ + RL RKE+D V+ +
Sbjct: 1 MLFCPNCSNILIIA-ADTGRN-KWRCPTCPYEFPIHK--QMSSRTRLKRKEVDDVLGGEA 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
K+A +T C C +DKA + ++QIRSADEP T FY C C H WRE+
Sbjct: 57 AWKDADSTSASCEKCGNDKAYFMQLQIRSADEPMTTFYRCTRSTCGHNWREN 108
>H2AMF0_KAZAF (tr|H2AMF0) DNA-directed RNA polymerase subunit OS=Kazachstania
africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 /
CECT 1963 / NBRC 1671 / NRRL Y-8276) GN=KAFR0A01110 PE=3
SV=1
Length = 110
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML L + G + L C +CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPVCNNMLLVSLADSGIYT-LKCHSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C+ + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKVQCPNYDKCAGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>M7XH64_RHOTO (tr|M7XH64) DNA-directed RNA polymerase III subunit RPC10
OS=Rhodosporidium toruloides NP11 GN=RHTO_04262 PE=4
SV=1
Length = 109
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N L G+ + CQTCPY + K + + L RK +D V+ +D
Sbjct: 1 MIFCPYCANQLGLVEGTSGN--KFGCQTCPYEYPLNK--RYMERTYLKRKAVDDVLGGED 56
Query: 61 M-KNAPTTEVRCPN-CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
KN +T V CP C D+A + ++QIRSADEP+T FY C N C HQWRE+
Sbjct: 57 SWKNVDSTAVDCPKECGSDRAFFMQIQIRSADEPSTTFYKCCNMSCNHQWREN 109
>A7SWZ1_NEMVE (tr|A7SWZ1) DNA-directed RNA polymerase subunit OS=Nematostella
vectensis GN=v1g231081 PE=3 SV=1
Length = 108
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+N+L E R CQTCPYV I K V K+ +L KE+D V+
Sbjct: 2 LLFCPSCANVLVVEEGTGPSAYRFACQTCPYVHNIAKKVSSKKYPKL--KEVDDVLGGKS 59
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE RCP C H++A + ++Q RSADEP T FY C + C ++W+E
Sbjct: 60 AWENVDSTEERCPKCDHNRAYFMQIQTRSADEPMTTFYKCCS--CGNRWKE 108
>B0ENS7_ENTDS (tr|B0ENS7) DNA-directed RNA polymerase subunit OS=Entamoeba dispar
(strain ATCC PRA-260 / SAW760) GN=EDI_058230 PE=3 SV=1
Length = 107
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FC +C N+L E G C TCPY K KI + L RK+ID V+ + K
Sbjct: 4 FCANCGNLLVVE---RGTELYFKCSTCPYKFTFNK--KIVYESELKRKQIDAVLGEEQWK 58
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA TE+ C C ++ A + ++QIRSADEP T FY C N C +QWR+
Sbjct: 59 NAQKTEIICEKCGYNSAYFMQIQIRSADEPMTTFYKCANFDCGYQWRDG 107
>D8SFE7_SELML (tr|D8SFE7) DNA-directed RNA polymerase subunit OS=Selaginella
moellendorffii GN=SELMODRAFT_115881 PE=3 SV=1
Length = 107
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRL--FCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY 58
MEFCP+CS++L E H +RL FC TC Y+ I+ +I ++ L KE+D ++
Sbjct: 1 MEFCPTCSSLLLVE-----HAARLRYFCPTCAYIYNIDH--EITKRIPLKNKEMDDILGG 53
Query: 59 DDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+D KN T + C C+H+ A + +QIRSADEP+T FY C N C ++WRED
Sbjct: 54 EDAWKNCDRTPITCAKCNHEHAYFMLVQIRSADEPSTAFYRCCNPDCSYRWRED 107
>D8R5K0_SELML (tr|D8R5K0) DNA-directed RNA polymerase subunit OS=Selaginella
moellendorffii GN=SELMODRAFT_85224 PE=3 SV=1
Length = 107
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRL--FCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY 58
MEFCP+CS++L E H +RL FC TC Y+ I+ +I ++ L KE+D ++
Sbjct: 1 MEFCPTCSSLLLVE-----HAARLRYFCPTCAYIYNIDH--EITKRIPLKNKEMDDILGS 53
Query: 59 DDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+D KN T + C C+H+ A + +QIRSADEP+T FY C N C ++WRED
Sbjct: 54 EDAWKNCDRTPITCAKCNHEHAYFMLVQIRSADEPSTAFYRCCNPDCSYRWRED 107
>K7IXZ1_NASVI (tr|K7IXZ1) DNA-directed RNA polymerase subunit OS=Nasonia
vitripennis PE=3 SV=1
Length = 108
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C N+L E + R C TCPY+ I + V + +L KE+D V+
Sbjct: 4 FCPTCGNVLHVEEGTVSM--RFACNTCPYISNINRRVSSRTYPKL--KEVDDVLGGSAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE RCP CS+ +A + ++Q RSADEP T FY C N +C H WRE
Sbjct: 60 ENVDSTEERCPKCSNMRAYFMQIQTRSADEPMTTFYKCCNPQCGHNWRE 108
>A9QVW4_CAEBE (tr|A9QVW4) DNA-directed RNA polymerase subunit OS=Caenorhabditis
brenneri GN=CAEBREN_07334 PE=3 SV=1
Length = 108
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C L+ E + +R C CPYVC + V + +L K+ID V+
Sbjct: 2 LTFCPECGCTLQIEQGD--QCNRFSCPACPYVCPVTHSVSSRIYPKL--KDIDDVLGGPG 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP CSH++A + ++Q RSADEP TIFY C N C H+W+E
Sbjct: 58 AWENAQITDERCPVCSHERAYFMQLQTRSADEPMTIFYRCANNACAHRWKE 108
>A8XIZ3_CAEBR (tr|A8XIZ3) DNA-directed RNA polymerase subunit OS=Caenorhabditis
briggsae GN=CBG13943 PE=3 SV=1
Length = 108
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP C +L+ E G + F C CPYVC I + + +L K+ID V+
Sbjct: 2 LTFCPECGCVLQIE---TGEQCQQFSCSACPYVCPIVATISSRIYPKL--KDIDDVLGGP 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP CSH++A + ++Q RSADEP TIFY C N C H+W+E
Sbjct: 57 GAWENAQVTDERCPLCSHERAYFMQLQTRSADEPMTIFYRCANNSCAHRWKE 108
>D8TDA8_SELML (tr|D8TDA8) DNA-directed RNA polymerase subunit OS=Selaginella
moellendorffii GN=SELMODRAFT_137292 PE=3 SV=1
Length = 107
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRL--FCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY 58
MEFCP+CS++L E H RL FC TC Y+ ++ +KI + L KE+D V+
Sbjct: 1 MEFCPTCSSLLLVE-----HAGRLRYFCPTCAYIFGVD--LKISKPIPLKNKEVDDVMGG 53
Query: 59 DDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+D KN T V C C++ A + +QIRSADEP+T FY C N C +WRED
Sbjct: 54 EDAWKNCDRTPVTCAKCNYGHAYFMLVQIRSADEPSTAFYRCGNPNCSFRWRED 107
>J8Q6L4_SACAR (tr|J8Q6L4) DNA-directed RNA polymerase subunit OS=Saccharomyces
arboricola (strain H-6 / AS 2.3317 / CBS 10644)
GN=SU7_0603 PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>G2WAF1_YEASK (tr|G2WAF1) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain Kyokai no. 7 / NBRC 101557)
GN=K7_RPC11 PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>C8Z4W5_YEAS8 (tr|C8Z4W5) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1D0_2894g PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>C7GTA4_YEAS2 (tr|C7GTA4) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain JAY291) GN=RPC11 PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>B3LGM2_YEAS1 (tr|B3LGM2) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SCRG_00468 PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>A6ZY12_YEAS7 (tr|A6ZY12) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain YJM789) GN=RPC11 PE=3 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+NML + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>N1P824_YEASX (tr|N1P824) Rpc11p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_3865 PE=4 SV=1
Length = 110
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS--RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY 58
+ FCPSC+NML L G N L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNML---LITSGDNGVYTLACRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG- 56
Query: 59 DDMKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 57 GGWDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKEN 110
>B7P467_IXOSC (tr|B7P467) DNA-directed RNA polymerase subunit (Fragment)
OS=Ixodes scapularis GN=IscW_ISCW001464 PE=3 SV=1
Length = 109
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C+N+L E R C TCPYV I+ + ++ RL K++D V+
Sbjct: 3 LLFCPTCANILIVE--QGLECFRFACNTCPYVHNIKAKMSNRKYPRL--KDVDDVLGGAA 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP C H++A + ++Q RSADEP T FY C N+ C HQWRE
Sbjct: 59 AWENVDSTEEKCPKCGHERAYFMQIQTRSADEPMTTFYKCCNQLCGHQWRE 109
>L8WQG7_9HOMO (tr|L8WQG7) DNA-directed RNA polymerase subunit OS=Rhizoctonia
solani AG-1 IA GN=AG1IA_06970 PE=3 SV=1
Length = 126
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 21/129 (16%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L G N + CQTCPY I K ++ + RL RKE+D V+ D
Sbjct: 1 MLFCPTCANILIISAEASGFN-KWACQTCPYEFPITK--QMTSRTRLQRKEVDDVLGGDA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYW-----------------CLNE 102
M K+ T+V CP C + +A + ++QIRSADEP T F C N
Sbjct: 58 MWKDVDQTDVACPKCDNGRAYFMQLQIRSADEPMTTFRLISATALAHFTNSPTPDRCANS 117
Query: 103 KCRHQWRED 111
+C +QWR D
Sbjct: 118 QCGYQWRVD 126
>Q70W34_KLULC (tr|Q70W34) DNA-directed RNA polymerase subunit OS=Kluyveromyces
lactis GN=rpc11 PE=3 SV=1
Length = 112
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G +L C +CPY I+ G+++ ++ L RKE+D V+ +
Sbjct: 2 LSFCPLCNNMLLVSKADSGL-YKLACGSCPYQFLID-GIEVYDRKNLPRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CPN C+ ++A + ++QIRSADEP T FY C+N C H+WRE+
Sbjct: 60 AWDNVDQTAAQCPNHDQCAGERAYFFQLQIRSADEPMTTFYKCVN--CGHKWREN 112
>F2Z6J0_KLULA (tr|F2Z6J0) DNA-directed RNA polymerase subunit OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=KLLA0F18568g PE=3 SV=1
Length = 112
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G +L C +CPY I+ G+++ ++ L RKE+D V+ +
Sbjct: 2 LSFCPLCNNMLLVSKADSGL-YKLACGSCPYQFLID-GIEVYDRKNLPRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CPN C+ ++A + ++QIRSADEP T FY C+N C H+WRE+
Sbjct: 60 AWDNVDQTAAQCPNHDQCAGERAYFFQLQIRSADEPMTTFYKCVN--CGHKWREN 112
>G0V827_NAUCC (tr|G0V827) DNA-directed RNA polymerase subunit OS=Naumovozyma
castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 /
NRRL Y-12630) GN=NCAS0A10670 PE=3 SV=1
Length = 110
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G + L C++CPY IE G++I ++ L RKE+D V+
Sbjct: 2 LSFCPLCNNMLLITTADSGVYT-LTCRSCPYEFPIE-GIEIYDRKTLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C + A + ++QIRSADEP T FY C+N C H+W+E+
Sbjct: 59 WDNVDQTKVQCPNYEKCGGESAYFFQLQIRSADEPMTTFYKCVN--CAHRWKEN 110
>E3NLB5_CAERE (tr|E3NLB5) DNA-directed RNA polymerase subunit OS=Caenorhabditis
remanei GN=CRE_24855 PE=3 SV=1
Length = 108
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C +L+ E + R C CPYVC I + + +L K+ID V+
Sbjct: 2 LTFCPECGCVLQVEAGD--QCMRFSCSACPYVCPITSTISSRIYPKL--KDIDDVLGGPG 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP C+H++A + ++Q RSADEP TIFY C + C H+W+E
Sbjct: 58 AWENAQITDERCPLCAHERAYFMQLQTRSADEPMTIFYRCADNSCAHRWKE 108
>Q6WCQ3_IXOSC (tr|Q6WCQ3) DNA-directed RNA polymerase subunit OS=Ixodes
scapularis PE=3 SV=1
Length = 108
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C+N+L E R C TCPYV I+ + ++ RL K++D V+
Sbjct: 2 LLFCPTCANILIVE--QGLECFRFACNTCPYVHNIKAKMSNRKYPRL--KDVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE +CP C H++A + ++Q RSADEP T FY C N+ C HQWR+
Sbjct: 58 AWENVDSTEEKCPKCGHERAYFMQIQTRSADEPMTTFYKCCNQLCGHQWRD 108
>F4X5U8_ACREC (tr|F4X5U8) DNA-directed RNA polymerase subunit OS=Acromyrmex
echinatior GN=G5I_13739 PE=3 SV=1
Length = 110
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+N+L+F + G +R C TCPY+ I +I + KE +I +
Sbjct: 3 LRFCPFCANLLRFREHSSG--NRFACPTCPYIYPIRS--RISSRIYFTGKERADIIDAES 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+T+ RCP CSH +A + ++Q RSADEP T+FY C N +C H WR D
Sbjct: 59 TWMGVDSTDERCPKCSHPRAYFKQLQTRSADEPMTLFYRCCNHECAHTWRVD 110
>H2W1Y6_CAEJA (tr|H2W1Y6) DNA-directed RNA polymerase subunit OS=Caenorhabditis
japonica GN=WBGene00128156 PE=3 SV=1
Length = 108
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C +++ E + R C CPYVC + V K +L K+ID V+
Sbjct: 2 LTFCPECGCVMQIEEGD--QCLRFSCPACPYVCPVTHIVSSKIYPKL--KDIDDVLGGPG 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP CSHD+A + ++Q RSADEP T+FY C + C H+W+E
Sbjct: 58 AWENAQITDERCPLCSHDRAYFMQLQTRSADEPMTVFYRCADNACAHRWKE 108
>F0ZS39_DICPU (tr|F0ZS39) DNA-directed RNA polymerase subunit OS=Dictyostelium
purpureum GN=DICPUDRAFT_37036 PE=3 SV=1
Length = 109
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVI--SY 58
M FCP C+NML E P++ ++R +CQTCPYV +I+ K+ K LVRK +D +
Sbjct: 1 MLFCPLCANMLLVE-PDIT-DTRFYCQTCPYVFHIKN--KVVTKVPLVRKVVDSDVFGGE 56
Query: 59 DDMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+ K+A EV CP C H +A ++Q+ A EP T F C N C HQW++
Sbjct: 57 EAWKSADQVEVECPVCHHKRAGIIDIQVSLAPEPKTSFLRCRNPSCEHQWQK 108
>H9I8Z1_ATTCE (tr|H9I8Z1) DNA-directed RNA polymerase subunit OS=Atta cephalotes
PE=3 SV=1
Length = 110
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+N+L+F + G +R C TCPY+ I +I + KE +I +
Sbjct: 3 LRFCPFCANLLRFREHSSG--NRFACPTCPYIYPIRS--RISSRIYFTGKERADIIDAES 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+T+ RCP CSH +A + ++Q RSADEP T+FY C N +C H WR D
Sbjct: 59 TWMGVDSTDERCPKCSHPRAYFRQLQTRSADEPMTLFYRCCNHECAHTWRVD 110
>Q750C6_ASHGO (tr|Q750C6) DNA-directed RNA polymerase subunit OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=AGR029W PE=3 SV=1
Length = 112
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 8/115 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G RL C +CPY IE GV+I ++ L RKE+D V+ +
Sbjct: 2 LSFCPYCNNMLPVSKGDSGV-YRLGCPSCPYEFPIE-GVEIYDRRNLPRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP---NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T V+CP C +KA + ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 60 AWDNVDQTAVQCPQHETCGGEKAYFFQLQIRSADEPMTTFYKCVT--CGHKWREN 112
>M9N6P5_ASHGS (tr|M9N6P5) FAGR029Wp OS=Ashbya gossypii FDAG1 GN=FAGOS_FAGR029W
PE=4 SV=1
Length = 112
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 8/115 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G RL C +CPY IE GV+I ++ L RKE+D V+ +
Sbjct: 2 LSFCPYCNNMLPVSKGDSGV-YRLGCPSCPYEFPIE-GVEIYDRRNLPRKEVDDVLGGEG 59
Query: 61 M-KNAPTTEVRCP---NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T V+CP C +KA + ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 60 AWDNVDQTAVQCPQHETCGGEKAYFFQLQIRSADEPMTTFYKCVT--CGHKWREN 112
>G8ZTI1_TORDC (tr|G8ZTI1) DNA-directed RNA polymerase subunit OS=Torulaspora
delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 /
NCYC 2629 / NRRL Y-866) GN=TDEL0D03410 PE=3 SV=1
Length = 110
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G S L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPLCNNMLLIASADSGVYS-LSCRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C+ + A + ++QIRSADEP T FY C+N C ++W+E+
Sbjct: 59 WDNVDQTKVQCPNYDICAGESAYFFQLQIRSADEPMTTFYKCVN--CGNRWKEN 110
>C3Y255_BRAFL (tr|C3Y255) DNA-directed RNA polymerase subunit OS=Branchiostoma
floridae GN=BRAFLDRAFT_114926 PE=3 SV=1
Length = 108
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C+N+L E + R CQTCPY+ I + K+ +L KE+D V+ +
Sbjct: 4 FCPTCANLLVAEEGEKCY--RFGCQTCPYIYNITHKISFKKYPKL--KEVDDVLGGPEAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N +TE +CP C H +A + ++Q RSADEP T FY C + +C H+W++
Sbjct: 60 ANVDSTEEKCPKCEHPRAYFMQIQTRSADEPMTTFYKCCSAECGHRWKD 108
>N6TUV5_9CUCU (tr|N6TUV5) Uncharacterized protein (Fragment) OS=Dendroctonus
ponderosae GN=YQE_01751 PE=4 SV=1
Length = 109
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CSN+L F ++ + C+ CP +++ + + +L K ID V+ +D
Sbjct: 2 VSFCPFCSNLL-FAEKSVSGRIQFTCKLCPVFFPVQRTITSRTYCKL--KSIDDVLGGED 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN +TE RCP C H++A + ++Q RSADEP T FY C N +C++ WR+
Sbjct: 59 AWKNVDSTEERCPKCDHNRAYFQQLQTRSADEPMTTFYRCCNNECKYNWRD 109
>E3X4W0_ANODA (tr|E3X4W0) DNA-directed RNA polymerase subunit OS=Anopheles
darlingi GN=AND_28749 PE=3 SV=1
Length = 108
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPY+C I++ + + +L KE+D V+
Sbjct: 2 LMFCPTCGNLLLVEEST--DSLRFSCNTCPYICKIKRKISTRIYPKL--KEVDHVMGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C + +A + +MQ RSADEP T FY C + C H WR+
Sbjct: 58 AWENVDSTDAVCPACGNARAYFMQMQTRSADEPMTTFYKCCEQTCGHLWRD 108
>Q6P7G0_XENLA (tr|Q6P7G0) DNA-directed RNA polymerase subunit OS=Xenopus laevis
GN=polr3k PE=3 SV=1
Length = 108
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNINRKVTSRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C+H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAETCPKCAHPRAYFMQIQTRSADEPMTTFYKCCNSQCGHRWRD 108
>B3RF23_SORAR (tr|B3RF23) DNA-directed RNA polymerase subunit OS=Sorex araneus
GN=POLR3K PE=3 SV=1
Length = 108
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPSCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCQHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>Q8BU05_MOUSE (tr|Q8BU05) DNA-directed RNA polymerase subunit OS=Mus musculus
GN=Polr3k PE=3 SV=2
Length = 107
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 1 MLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 57 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 107
>G3IBS2_CRIGR (tr|G3IBS2) DNA-directed RNA polymerase subunit OS=Cricetulus
griseus GN=I79_021104 PE=3 SV=1
Length = 108
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPSCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>E1G9P1_LOALO (tr|E1G9P1) DNA-directed RNA polymerase subunit OS=Loa loa
GN=LOAG_09878 PE=3 SV=1
Length = 108
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM 61
FCP C + L+ E G N F C CPYV I K +K + +L K++D V+
Sbjct: 4 FCPECGSSLQVE---EGSNCYQFTCHNCPYVQPITKLIKSRYYPKL--KDLDEVLGGPGA 58
Query: 62 -KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP C+ D+A + ++Q RSADEP T+FY C N +C H+W+E
Sbjct: 59 WENAQITDERCPRCAGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWKE 108
>M3WAT9_FELCA (tr|M3WAT9) DNA-directed RNA polymerase subunit OS=Felis catus
GN=POLR3K PE=3 SV=1
Length = 108
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>E2QZU0_CANFA (tr|E2QZU0) DNA-directed RNA polymerase subunit OS=Canis familiaris
GN=POLR3K PE=3 SV=2
Length = 108
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>E1C6D4_CHICK (tr|E1C6D4) DNA-directed RNA polymerase subunit OS=Gallus gallus
GN=POLR3K PE=3 SV=2
Length = 108
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E H R C TCPYV + + V ++ RL KE+D V+
Sbjct: 2 LLFCPACGNVLVAEEGPRCH--RFACTTCPYVRNVTRKVSSRKYPRL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
>H0V7F6_CAVPO (tr|H0V7F6) DNA-directed RNA polymerase subunit OS=Cavia porcellus
GN=LOC100735417 PE=3 SV=1
Length = 108
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>G5BXZ0_HETGA (tr|G5BXZ0) DNA-directed RNA polymerase subunit OS=Heterocephalus
glaber GN=GW7_13007 PE=3 SV=1
Length = 108
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>I2H905_TETBL (tr|I2H905) DNA-directed RNA polymerase subunit OS=Tetrapisispora
blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC
10599 / NRRL Y-10934 / UCD 77-7) GN=TBLA0I01990 PE=3
SV=1
Length = 111
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + L C++CPY I+ G++I +++L RKE+D V+
Sbjct: 2 ISFCPLCNNMLLIATSQTENVYTLTCKSCPYEFPIQ-GIEIFDRKKLPRKEVDDVLG-GG 59
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C + A + ++QIRSADEP T FY C+N C ++W+E+
Sbjct: 60 WDNVDQTKVQCPNYDNCGGESAYFFQLQIRSADEPMTTFYKCVN--CGNRWKEN 111
>C1FXX2_DASNO (tr|C1FXX2) DNA-directed RNA polymerase subunit OS=Dasypus
novemcinctus GN=POLR3K PE=3 SV=1
Length = 108
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTSRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>Q5KEF1_CRYNJ (tr|Q5KEF1) DNA-directed RNA polymerase subunit OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=CNG00720 PE=3 SV=1
Length = 132
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N L + + ++ C TCPY IE+ +I + L RKE+D V+ +
Sbjct: 1 MLFCPYCANSLT--IGDREDSTDKVCPTCPYQFIIER--QISMRTHLKRKEVDDVLGGKE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ CP C H +A + +MQIRSADEP T FY C +C HQWRE
Sbjct: 57 AWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCC--ECGHQWRE 105
>Q55P07_CRYNB (tr|Q55P07) DNA-directed RNA polymerase subunit OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=CNBG4050 PE=3 SV=1
Length = 132
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N L + + ++ C TCPY IE+ +I + L RKE+D V+ +
Sbjct: 1 MLFCPYCANSLT--IGDREDSTDKVCPTCPYQFIIER--QISMRTHLKRKEVDDVLGGKE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ CP C H +A + +MQIRSADEP T FY C +C HQWRE
Sbjct: 57 AWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCC--ECGHQWRE 105
>Q01CB3_OSTTA (tr|Q01CB3) DNA-directed RNA polymerase subunit OS=Ostreococcus
tauri GN=Ot03g03890 PE=3 SV=1
Length = 117
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 1 MEFCPSCSNMLKFELPNM--------GHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEI 52
+ FCP+C+N+L E + G RL C CPY + GV+ ++ + RK +
Sbjct: 2 LTFCPTCANLLLIERESAVGTSSSGGGGGVRLRCAACPYAYDVVDGVR--QRVKTTRKTV 59
Query: 53 DPVISYDDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
D V+ D+ +N T CP C H +A + ++QIRSADEP ++FY C +C HQWRE
Sbjct: 60 DDVLGGDEAWRNVDKTATTCPRCEHGEAYFMQIQIRSADEPMSVFYKCC--ECAHQWRE 116
>H0GSL5_9SACH (tr|H0GSL5) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae x Saccharomyces kudriavzevii VIN7
GN=VIN7_6165 PE=3 SV=1
Length = 110
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC+N+L + G + L C++CPY IE G++I +++L RKE+D V+
Sbjct: 2 LSFCPSCNNLLLITSGDSGVYT-LECRSCPYEFPIE-GIEIYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+ +CPN C + A + ++QIRSADEP T FY C+N C ++W+E+
Sbjct: 59 WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGNRWKEN 110
>Q6C866_YARLI (tr|Q6C866) DNA-directed RNA polymerase subunit OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=YALI0D22308g
PE=3 SV=1
Length = 110
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 10/115 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVI---- 56
+ FCP+C+NML L G+ R C+TCPY Y++ G + ++ L +K++D V+
Sbjct: 2 LTFCPTCTNMLT--LSTSGNGMRFECRTCPYEYYLQDGTIVYDRKVLEKKKVDSVLGGEN 59
Query: 57 SYDDMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+++++ P ++ CP CS+ A + +QIRSADEP T F C C HQWRE+
Sbjct: 60 AWENVDKDPGSQ--CPKCSNMGAYFYMLQIRSADEPMTKF--CRCTACFHQWREN 110
>Q9N4B7_CAEEL (tr|Q9N4B7) DNA-directed RNA polymerase subunit OS=Caenorhabditis
elegans GN=rpc-11 PE=3 SV=1
Length = 108
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C +L+ E + R C CPYVC + + V + +L K+ID V+
Sbjct: 2 LTFCPECGCVLQIE--SGEQCMRFSCPACPYVCPVTQTVTSRIYPKL--KDIDDVLGGPG 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
NA T+ CP CSH +A + ++Q RSADEP+TIFY C + C H+W++
Sbjct: 58 AWANAQVTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWKD 108
>F1LHR9_ASCSU (tr|F1LHR9) DNA-directed RNA polymerase subunit OS=Ascaris suum
PE=3 SV=1
Length = 108
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM 61
FCP C L+ E G N F C CPY+ I K +K + +L K++D V+
Sbjct: 4 FCPECGASLQIE---EGQNCLQFSCHNCPYIQPITKLIKSRVYPKL--KDLDEVLGGPSA 58
Query: 62 -KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T+ RCP C D+A + ++Q RSADEP T+FY C N +C H+W+E
Sbjct: 59 WENAQITDERCPRCGGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWKE 108
>C5DE90_LACTC (tr|C5DE90) DNA-directed RNA polymerase subunit OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=KLTH0C07216g PE=3 SV=1
Length = 127
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C NML + G + L C CPY IE GV++ ++ L RKE+D V+
Sbjct: 19 LSFCPHCHNMLVISQADSGAYA-LQCGACPYAFPIE-GVEVYDRKTLPRKEVDDVLG-GG 75
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T V+CPN C ++A + ++QIRSADEP T FY C++ C ++WRE+
Sbjct: 76 WDNVDQTAVQCPNYDECGGERAYFFQLQIRSADEPMTTFYKCVS--CGNRWREN 127
>A8QFI6_BRUMA (tr|A8QFI6) DNA-directed RNA polymerase subunit OS=Brugia malayi
GN=Bm1_53520 PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP C + L+ E G N F C CPYV I K ++ + +L K++D V+
Sbjct: 2 LLFCPECGSSLQIE---EGSNCYQFACHNCPYVQPITKLIRSRHYPKL--KDLDEVLGGP 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T RCP C+ D+A + ++Q RSADEP T+FY C N +C H+W+E
Sbjct: 57 GAWENAQITNERCPRCAGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWKE 108
>E6R9Z3_CRYGW (tr|E6R9Z3) DNA-directed RNA polymerase subunit OS=Cryptococcus
gattii serotype B (strain WM276 / ATCC MYA-4071)
GN=CGB_G5640W PE=3 SV=1
Length = 131
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N L + + ++ C TCPY IE+ +I + L RKE+D V+ +
Sbjct: 1 MLFCPYCANSLT--IGDREDSTDKVCPTCPYQFIIER--QISMRTHLKRKEVDDVLGGKE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ CP C H +A + +MQIRSADEP T FY C +C HQWRE
Sbjct: 57 AWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCC--ECGHQWRE 105
>B5G0B7_TAEGU (tr|B5G0B7) DNA-directed RNA polymerase subunit OS=Taeniopygia
guttata PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E H R C TCPYV + + V ++ RL KE+D V+
Sbjct: 2 LLFCPACGNVLVAEEGPRCH--RFACTTCPYVRNVTRKVTSRKYPRL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNPQCGHRWRD 108
>E9IEF8_SOLIN (tr|E9IEF8) DNA-directed RNA polymerase subunit (Fragment)
OS=Solenopsis invicta GN=SINV_08736 PE=3 SV=1
Length = 110
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+N+L+F N RL C TCPY+ I K R + +K D + S
Sbjct: 3 LRFCPYCANLLRFREDTFTRN-RLACPTCPYIYQIRKEGLRSRTYFVGKKLSDILDSKSA 61
Query: 61 MKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ TE RCP CSH +A + + Q RSADEP ++FY C + C ++WR D
Sbjct: 62 LLGQQATEERCPKCSHPRAFFEQRQTRSADEPMSLFYTCCS--CSYKWRVD 110
>A8BG20_GIAIC (tr|A8BG20) DNA-directed RNA polymerase subunit OS=Giardia
intestinalis (strain ATCC 50803 / WB clone C6)
GN=GL50803_137619 PE=3 SV=1
Length = 105
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C N+L EL + + +C+TC Y Y G +I R L RK +DPV+ +
Sbjct: 1 MLFCPCCGNLLLIELSG---DVQFYCKTCAYR-YTLSG-QISRSLTLTRKSVDPVLGGET 55
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A T+ CP C+ A + +MQIRS+DEP + FY C +C HQWRED
Sbjct: 56 AWQGADKTQNPCPVCAFPDAFWIQMQIRSSDEPMSRFYRCC--QCAHQWRED 105
>J9VTJ7_CRYNH (tr|J9VTJ7) DNA-directed RNA polymerase subunit OS=Cryptococcus
neoformans var. grubii serotype A (strain H99 / ATCC
208821 / CBS 10515 / FGSC 9487) GN=CNAG_03521 PE=3 SV=1
Length = 118
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C+N L + C TCPY IE+ +I + L RKE+D V+ +
Sbjct: 1 MLFCPYCANSLTIGDREDSTDKCWVCPTCPYQFIIER--QISMRTHLKRKEVDDVLGGKE 58
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ CP C H +A + +MQIRSADEP T FY C +C HQWRE
Sbjct: 59 AWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTFYKCC--ECGHQWRE 107
>J9ERG5_WUCBA (tr|J9ERG5) DNA-directed RNA polymerase subunit OS=Wuchereria
bancrofti GN=WUBG_03978 PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLF-CQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM 61
FCP C + L+ E G N F C CPYV I K ++ + +L K++D V+
Sbjct: 4 FCPECGSSLQVE---EGSNCYQFACHNCPYVQPITKLIRSRHYPKL--KDLDEVLGGPGA 58
Query: 62 -KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+NA T RCP C+ D+A + ++Q RSADEP T+FY C N +C H+W+E
Sbjct: 59 WENAQITNERCPRCAGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWKE 108
>Q5FVH1_RAT (tr|Q5FVH1) DNA-directed RNA polymerase subunit OS=Rattus
norvegicus GN=Polr3k PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>L5KH64_PTEAL (tr|L5KH64) DNA-directed RNA polymerase subunit OS=Pteropus alecto
GN=PAL_GLEAN10011819 PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>K9IGP0_DESRO (tr|K9IGP0) DNA-directed RNA polymerase subunit OS=Desmodus
rotundus PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>H9EUX4_MACMU (tr|H9EUX4) DNA-directed RNA polymerase subunit OS=Macaca mulatta
GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>H2QA65_PANTR (tr|H2QA65) DNA-directed RNA polymerase subunit OS=Pan troglodytes
GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>G3QZI9_GORGO (tr|G3QZI9) DNA-directed RNA polymerase subunit OS=Gorilla gorilla
gorilla GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>G1R900_NOMLE (tr|G1R900) DNA-directed RNA polymerase subunit OS=Nomascus
leucogenys GN=LOC100582173 PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>G1PSP3_MYOLU (tr|G1PSP3) DNA-directed RNA polymerase subunit OS=Myotis lucifugus
PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>F2Z4X7_PIG (tr|F2Z4X7) DNA-directed RNA polymerase subunit OS=Sus scrofa
GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>B2KHV5_RHIFE (tr|B2KHV5) DNA-directed RNA polymerase subunit OS=Rhinolophus
ferrumequinum GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>B1MT29_CALMO (tr|B1MT29) DNA-directed RNA polymerase subunit OS=Callicebus
moloch GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>B0VX71_CALJA (tr|B0VX71) DNA-directed RNA polymerase subunit OS=Callithrix
jacchus GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>A9L8T4_PAPAN (tr|A9L8T4) DNA-directed RNA polymerase subunit OS=Papio anubis
GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>J7S8G9_KAZNA (tr|J7S8G9) DNA-directed RNA polymerase subunit OS=Kazachstania
naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797
/ CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)
GN=KNAG0H01160 PE=3 SV=1
Length = 110
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G + L C +CPY I+ G++I +++L RKE+D V+
Sbjct: 2 LSFCPICNNMLLISHADSGIYT-LTCHSCPYEFPID-GIEIYDRKKLERKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C + A + ++QIRSADEP T FY C+N C ++W+E+
Sbjct: 59 WDNVDQTKVQCPNYDKCGGESAYFFQLQIRSADEPMTTFYKCVN--CGNRWKEN 110
>D7G5N9_ECTSI (tr|D7G5N9) DNA-directed RNA polymerase subunit OS=Ectocarpus
siliculosus GN=Esi_0067_0008 PE=3 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+ ++L E G +R CQTCPY+ +E KI RK L +K +D ++ DD
Sbjct: 1 MLFCPTDGSLLMVESGPQGW-TRFCCQTCPYIHPMEPSDKITRKIALKKKAVDDIMGGDD 59
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ CP C++ +A + +Q+RSADEP T FY C N C+ +W+E
Sbjct: 60 AWANVDKTQTTCPFCNNKEAFFLMVQLRSADEPMTCFYKCTN--CKQRWKE 108
>C5DU35_ZYGRC (tr|C5DU35) DNA-directed RNA polymerase subunit
OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732
/ NBRC 1130 / NCYC 568 / NRRL Y-229) GN=ZYRO0C13574g
PE=3 SV=1
Length = 110
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G + L C++CPY IE G+++ +++L RKE+D V+
Sbjct: 2 LSFCPLCNNMLLIASSDSGIYT-LTCKSCPYEFPIE-GIEVYDRKKLPRKEVDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C+ + A + ++QIRSADEP T F+ C+N C ++W+E+
Sbjct: 59 WDNVDQTKVQCPNYDKCAGESAYFFQLQIRSADEPMTTFFKCVN--CGNRWKEN 110
>G3UE31_LOXAF (tr|G3UE31) DNA-directed RNA polymerase subunit OS=Loxodonta
africana GN=LOC100658606 PE=3 SV=1
Length = 108
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAELCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNVQCGHRWRD 108
>R7SFW8_CONPW (tr|R7SFW8) Uncharacterized protein OS=Coniophora puteana (strain
RWD-64-598) GN=CONPUDRAFT_113195 PE=4 SV=1
Length = 106
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L G+N + C TC Y I K ++ + ++ RK++D V+ D+
Sbjct: 1 MLFCPTCANLLVIS-AETGYN-KWACNTCAYEFPITK--QMTSRTKMKRKQVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
M K+A +T + C C+H +A + ++QIRSADEP T FY C C + WRE+
Sbjct: 57 MWKHADSTAISCDKCNHGRAYFYQLQIRSADEPMTTFYRCAG--CGYNWREN 106
>C1BZC8_ESOLU (tr|C1BZC8) DNA-directed RNA polymerase subunit OS=Esox lucius
GN=RPC10 PE=3 SV=1
Length = 108
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTPEKCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNHECGHRWRD 108
>I3MUB5_SPETR (tr|I3MUB5) DNA-directed RNA polymerase subunit OS=Spermophilus
tridecemlineatus GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNVTRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>F1N3E8_BOVIN (tr|F1N3E8) DNA-directed RNA polymerase subunit OS=Bos taurus
GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNVTRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>M3ZD13_XIPMA (tr|M3ZD13) DNA-directed RNA polymerase subunit OS=Xiphophorus
maculatus GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE--EGQRCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEKCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
>F0VN62_NEOCL (tr|F0VN62) DNA-directed RNA polymerase subunit OS=Neospora caninum
(strain Liverpool) GN=NCLIV_055830 PE=3 SV=1
Length = 106
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEID-PVISYDDM 61
FCP+C NML L + CQTCPYV I++ K+ RK L K+ D P+ + +
Sbjct: 4 FCPTCHNML---LVRQEVTMQFHCQTCPYVFNIKE--KLTRKLPLTPKKADEPLDEHQEA 58
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
CP CSH +A + E+QIRSADEP T FY C N CR +WRE+
Sbjct: 59 SRGAKAPASCPKCSHTEAYFYEIQIRSADEPMTAFYCCCN--CRFRWREN 106
>B5KFS3_TAEGU (tr|B5KFS3) DNA-directed RNA polymerase subunit OS=Taeniopygia
guttata PE=3 SV=1
Length = 108
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E H R C TCPYV + + V ++ RL KE+D V+
Sbjct: 2 LLFCPACGNVLVAEEGPRCH--RFACTTCPYVRNVTRKVTSRKYPRL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + + Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQTQTRSADEPMTTFYKCCNPQCGHRWRD 108
>Q8JH46_9PERC (tr|Q8JH46) DNA-directed RNA polymerase subunit OS=Sphoeroides
nephelus GN=POLR3K PE=3 SV=1
Length = 108
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WRE
Sbjct: 58 AWENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRE 108
>E1EY26_GIAIA (tr|E1EY26) DNA-directed RNA polymerase subunit OS=Giardia
intestinalis (strain P15) GN=GLP15_4229 PE=3 SV=1
Length = 105
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C N+L EL + + +C+TC Y Y+ G +I R L RK +DPV+ +
Sbjct: 1 MLFCPCCGNLLLIELSG---DVQFYCKTCAYR-YMLSG-QISRSLTLTRKSVDPVLGGET 55
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A T+ CP C+ A + ++QIRS+DEP + FY C +C HQWRED
Sbjct: 56 AWQGADKTQNPCPICAFPDAFWIQIQIRSSDEPMSRFYRCC--QCAHQWRED 105
>G1XMK6_ARTOA (tr|G1XMK6) DNA-directed RNA polymerase subunit OS=Arthrobotrys
oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00169g59 PE=3 SV=1
Length = 111
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+CSN L + + L C TCPY + + ++ ++ + RKE+D ++ +
Sbjct: 2 LLFCPTCSNSLTVHRQSATGQNALTCPTCPYTYPLTR--RLFERRHIRRKEVDDILGGEG 59
Query: 61 M-KNAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N TEV+CP+ C D+A + +QIRSADEP T FY C+ KC H+WRE
Sbjct: 60 SWDNVDNTEVQCPDEVCGGDRAYFYMVQIRSADEPMTTFYKCM--KCGHKWRE 110
>B4GGZ5_DROPE (tr|B4GGZ5) DNA-directed RNA polymerase subunit OS=Drosophila
persimilis GN=Dper\GL17434 PE=3 SV=1
Length = 335
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTDSH--RFTCNTCPYISKITRKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKC-RHQWRE 110
+N +T+ CP+CSH +A + ++Q RSADEP T FY C N +HQ E
Sbjct: 60 ENVDSTDADCPSCSHKRAYFMQIQTRSADEPMTTFYKCCNHHTMQHQTVE 109
>A7TL36_VANPO (tr|A7TL36) DNA-directed RNA polymerase subunit OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294)
GN=Kpol_1065p14 PE=3 SV=1
Length = 110
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + G L C++CPY IE V+I ++ L RKEID V+
Sbjct: 2 LSFCPLCNNMLLVATSDSGI-YNLSCRSCPYEFPIEN-VEIYDRKELERKEIDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C+ + A + ++QIRSADEP T FY C+N C ++W+E+
Sbjct: 59 WDNVDQTKVQCPNYDNCAGESAYFFQLQIRSADEPMTTFYKCVN--CGNRWKEN 110
>I1BX20_RHIO9 (tr|I1BX20) Uncharacterized protein OS=Rhizopus delemar (strain RA
99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_05455 PE=4 SV=1
Length = 82
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 31 YVCYIEKGVKIKRKQRLVRKEIDPVISYDDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSA 89
+ Y RKQ L RKE+D V+ D KN +TE CP C HD+A + ++QIRSA
Sbjct: 2 FTVYRADTQHTTRKQ-LKRKEVDDVLGGADAWKNVDSTEATCPKCEHDRAYFMQIQIRSA 60
Query: 90 DEPATIFYWCLNEKCRHQWRE 110
DEP+++F+ C NE C+HQWRE
Sbjct: 61 DEPSSLFFKCCNEDCQHQWRE 81
>H3B418_LATCH (tr|H3B418) DNA-directed RNA polymerase subunit OS=Latimeria
chalumnae PE=3 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNVTRKVTSRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N C H+WR+
Sbjct: 58 AWENVDSTAETCPKCEHGRAYFMQIQTRSADEPMTTFYKCCNPACGHRWRD 108
>N4U296_FUSOX (tr|N4U296) DNA-directed RNA polymerase III subunit RPC10
OS=Fusarium oxysporum f. sp. cubense race 1
GN=FOC1_g10006901 PE=4 SV=1
Length = 110
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FCP C+N+L L N N RL C+TCP+ +I + V +R V KE D
Sbjct: 4 FCPHCANILTVSLTNTRTN-RLECRTCPFEHHITEPVFSRRMYERVEKE-DVFGGPGAWD 61
Query: 63 NAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CPN C D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 62 NAQKGRVQCPNEGCEGDEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 110
>J9MKE7_FUSO4 (tr|J9MKE7) DNA-directed RNA polymerase subunit OS=Fusarium
oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 /
FGSC 9935 / NRRL 34936) GN=FOXG_03363 PE=3 SV=1
Length = 110
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMK 62
FCP C+N+L L N N RL C+TCP+ +I + V +R V KE D
Sbjct: 4 FCPHCANILTVSLTNTRTN-RLECRTCPFEHHITEPVFSRRMYERVEKE-DVFGGPGAWD 61
Query: 63 NAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CPN C D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 62 NAQKGRVQCPNEGCEGDEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 110
>Q28ZP6_DROPS (tr|Q28ZP6) DNA-directed RNA polymerase subunit OS=Drosophila
pseudoobscura pseudoobscura GN=Dpse\GA17233 PE=3 SV=2
Length = 335
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTDSH--RFTCNTCPYISKITRKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKC-RHQWRE 110
+N +T+ CP+CSH +A + ++Q RSADEP T FY C N +HQ E
Sbjct: 60 ENVDSTDADCPSCSHKRAYFMQIQTRSADEPMTTFYKCCNHHTMQHQTVE 109
>Q5FVV0_XENTR (tr|Q5FVV0) DNA-directed RNA polymerase subunit OS=Xenopus
tropicalis GN=polr3k PE=3 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNVNRKVTSRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108
>D8M8E6_BLAHO (tr|D8M8E6) DNA-directed RNA polymerase subunit OS=Blastocystis
hominis GN=GSBLH_T00004085001 PE=3 SV=1
Length = 107
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS-YD 59
M FCP+C +L E G+ R FC TCPYV + G+ + + L RKE++ V+
Sbjct: 1 MYFCPTCGCLLLVE-TGTGY-LRFFCSTCPYVADV-TGI-VSSRLDLKRKEVEDVLGGAA 56
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+NAP T RCP C H+ A + ++QIRSADEP T FY C N C W ++
Sbjct: 57 QWENAPKTAARCPYCEHEVAYFQQIQIRSADEPMTTFYRCAN--CEKIWSDN 106
>B3MIT9_DROAN (tr|B3MIT9) DNA-directed RNA polymerase subunit OS=Drosophila
ananassae GN=Dana\GF12752 PE=3 SV=1
Length = 342
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I++ + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTSCH--RFTCNTCPYISKIKRKITAKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEK--CRHQWR 109
+N +T+ CP CSH +A + ++Q RSADEP T FY C N + HQ R
Sbjct: 60 ENVDSTDAECPQCSHKRAYFMQLQTRSADEPMTTFYKCCNHESFLGHQSR 109
>L2GP39_VITCO (tr|L2GP39) DNA-directed RNA polymerase subunit OS=Vittaforma
corneae (strain ATCC 50505) GN=VICG_00680 PE=3 SV=1
Length = 104
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD- 59
M FCP C+N L LP + L C TCPY + + V + Q K I+ V+ +
Sbjct: 1 MHFCPFCNNFL---LPEHQQSVHLICTTCPY--FYKLNVTLSFTQSNTVKIIEKVLRKEQ 55
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
D+K A +++C CS+ +A + E+Q RSADEP TIFY C KC H W+E
Sbjct: 56 DLKYANKCQIKCQKCSNGEALFVEIQTRSADEPMTIFYQC--TKCHHNWKE 104
>C1BEQ5_ONCMY (tr|C1BEQ5) DNA-directed RNA polymerase subunit OS=Oncorhynchus
mykiss GN=RPC11 PE=3 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTPEKCPKCEHPRAFFMQIQTRSADEPMTTFYKCCNYECGHRWRD 108
>B5XDQ5_SALSA (tr|B5XDQ5) DNA-directed RNA polymerase subunit OS=Salmo salar
GN=RPC10 PE=3 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTPEKCPKCEHPRAFFMQIQTRSADEPMTTFYKCCNYECGHRWRD 108
>C6LXC5_GIAIB (tr|C6LXC5) DNA-directed RNA polymerase subunit OS=Giardia
intestinalis (strain ATCC 50581 / GS clone H7)
GN=GL50581_3440 PE=3 SV=1
Length = 105
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C N+L EL + + +C+TC Y Y G +I R L RK +DPV+ +
Sbjct: 1 MLFCPCCGNLLLIELAG---DVQFYCKTCSYR-YTLSG-QISRSLTLTRKSVDPVLGGET 55
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ A T CP C +A + +MQIRS+DEP + FY C +C HQWRED
Sbjct: 56 AWQGADKTHNPCPICMFPEAFWIQMQIRSSDEPMSRFYRCC--QCAHQWRED 105
>I1G5B7_AMPQE (tr|I1G5B7) DNA-directed RNA polymerase subunit OS=Amphimedon
queenslandica GN=LOC100642092 PE=3 SV=1
Length = 108
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP C N+L E R C TCPYV I + V RL KE+D V+
Sbjct: 4 FCPVCGNLLTVE--EGPSCKRFACNTCPYVQNITQKVASYTFPRL--KEVDDVLGGAAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N T+ +CP CSH KA + ++Q RSADEP T FY C + C H+W+E
Sbjct: 60 ENVDNTDEKCPKCSHPKAYFMQIQTRSADEPMTTFYKCCSPSCSHRWKE 108
>H2TZ33_TAKRU (tr|H2TZ33) DNA-directed RNA polymerase subunit OS=Takifugu
rubripes GN=LOC101065513 PE=3 SV=1
Length = 108
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQ--RCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAETCPKCEHRRAFFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
>M2RP64_CERSU (tr|M2RP64) DNA-directed RNA polymerase subunit OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_46075 PE=3 SV=1
Length = 107
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L G+N + C TC Y I K ++ + +L RKE+D V+ D+
Sbjct: 1 MLFCPNCANLLVIS-AETGYN-KWACNTCAYEFPITK--QMTSRTKLKRKEVDDVLGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
M K+A T V CP C H++A + ++QIRSADEP T C C H WRE
Sbjct: 57 MWKHADATTVTCPKCDHNRAYFYQLQIRSADEPMTTCL-CRCAACAHNWRE 106
>G2Q5I4_THIHA (tr|G2Q5I4) DNA-directed RNA polymerase subunit OS=Thielavia
heterothallica (strain ATCC 42464 / BCRC 31852 / DSM
1799) GN=MYCTH_2297359 PE=3 SV=1
Length = 111
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP C+N+L G N RL C+TCPY I+ + I ++ RKE + V
Sbjct: 5 FCPYCANLLILSRMETGSN-RLECRTCPYQHAID--MPIYSRKNFPRKEKEDVFGGPGAW 61
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA +V+CP NCS D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 62 DNAQKGKVQCPTSNCSGDEAAFFQVQIRSADEPMTTFYKCMT--CGHRWREN 111
>L9KYE6_TUPCH (tr|L9KYE6) DNA-directed RNA polymerase subunit OS=Tupaia chinensis
GN=TREES_T100011775 PE=3 SV=1
Length = 108
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCPSC N L E H R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPSCGNGLIVEEGQRCH--RFACNTCPYVHNVTRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCSPQCGHRWRD 108
>D2HDU8_AILME (tr|D2HDU8) DNA-directed RNA polymerase subunit (Fragment)
OS=Ailuropoda melanoleuca GN=POLR3K PE=3 SV=1
Length = 108
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCSAQCGHRWRD 108
>Q4RHC2_TETNG (tr|Q4RHC2) DNA-directed RNA polymerase subunit (Fragment)
OS=Tetraodon nigroviridis GN=POLR3K PE=3 SV=1
Length = 108
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
>B3L0T6_PLAKH (tr|B3L0T6) DNA-directed RNA polymerase subunit OS=Plasmodium
knowlesi (strain H) GN=PKH_041330 PE=3 SV=1
Length = 106
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD-DM 61
FCP+C N++ L N+ + +C+TC + I+ + K R + K I P+ + D +
Sbjct: 4 FCPNCHNIV---LVNIENGVYFYCKTCNFKYKIKNKIFNKFDCRDLNKTI-PLDAVDMNN 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
KN T+ CP C+HD+A + MQIRSADEP+T+FY C+ KC H W+E
Sbjct: 60 KNMSKTQAVCPKCTHDEAYFYSMQIRSADEPSTLFYICI--KCNHHWKE 106
>R7TW02_9ANNE (tr|R7TW02) Uncharacterized protein OS=Capitella teleta
GN=CAPTEDRAFT_5287 PE=4 SV=1
Length = 108
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C+N+L E G N R C TCPY+ + + + ++ +L KE+D V+
Sbjct: 2 LMFCPTCANVLLVE---EGPNCYRFACNTCPYIQNVNRKMSSRKYPKL--KEVDDVLGGS 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP CS+D+A + ++Q RSADEP T +Y C KC H WR+
Sbjct: 57 AAWENVDSTNEKCPKCSNDRAFFMQIQTRSADEPMTTYYKCCAMKCGHMWRD 108
>R8B9H6_9PEZI (tr|R8B9H6) Putative dna-directed rna polymerase iii subunit rpc10
protein OS=Togninia minima UCRPA7 GN=UCRPA7_8596 PE=4
SV=1
Length = 110
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C+N+L G+N RL C+TCPY I + + +R+ RKE + V
Sbjct: 4 FCPTCANILTVSAMATGNN-RLECRTCPYEFAISEPLYSRRE--FTRKEKEDVFGGPGAW 60
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP +C ++AAY ++QIRSADEP T FY C+ KC H+WRE+
Sbjct: 61 DNAQKHTVQCPAEDCDGNEAAYFQVQIRSADEPMTTFYKCM--KCGHRWREN 110
>G9KHT8_MUSPF (tr|G9KHT8) DNA-directed RNA polymerase subunit (Fragment)
OS=Mustela putorius furo PE=2 SV=1
Length = 113
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 8 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 63
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWR 109
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR
Sbjct: 64 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCSAQCGHRWR 113
>D2VL62_NAEGR (tr|D2VL62) DNA-directed RNA polymerase subunit OS=Naegleria
gruberi GN=NAEGRDRAFT_69676 PE=3 SV=1
Length = 109
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS----RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVI 56
M FCP C N+L E G ++ R C+TCPY+C I+ ++ L +KE+D VI
Sbjct: 1 MFFCPQCGNILLIE-KAAGRSTDSVYRWVCKTCPYICNIKS--EMYFDMNLEKKEVDDVI 57
Query: 57 SYDDMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
D+ + T E +C C H+KA + Q RSADEP T F+ C KC HQW+E
Sbjct: 58 D-DEANWSETVETKCGKCDHNKAYFQMFQTRSADEPMTQFFKCC--KCGHQWKE 108
>I3IYV3_ORENI (tr|I3IYV3) DNA-directed RNA polymerase subunit OS=Oreochromis
niloticus GN=LOC100701443 PE=3 SV=1
Length = 108
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTPETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGHRWRD 108
>B8K127_RABIT (tr|B8K127) DNA-directed RNA polymerase subunit OS=Oryctolagus
cuniculus GN=POLR3K PE=3 SV=1
Length = 108
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E H R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCSPQCGHRWRD 108
>H0WKX8_OTOGA (tr|H0WKX8) DNA-directed RNA polymerase subunit OS=Otolemur
garnettii PE=3 SV=1
Length = 108
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C N L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPGCGNGLIVEEGQRCY--RFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>G4TWU1_PIRID (tr|G4TWU1) Probable Rpc11-DNA-directed RNA polymerase III subunit
C11 OS=Piriformospora indica (strain DSM 11827)
GN=PIIN_11743 PE=4 SV=1
Length = 98
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 10 MLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDMKNAPTTEV 69
ML G N + CQTCPY I + IK + L RK++D V+ DD T
Sbjct: 1 MLVISDETTGKN-KWICQTCPYEFPITR--TIKSRTHLKRKQVDDVLGGDD-SWGNQTPA 56
Query: 70 RCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
CP C H A + E+QIRSADEP TIFY C N++C QW+E+
Sbjct: 57 PCPKCEHPMAHFMELQIRSADEPMTIFYKCANKECGFQWKEN 98
>R0M291_NOSBO (tr|R0M291) DNA-directed RNA polymerase III subunit RPC10 OS=Nosema
bombycis CQ1 GN=RPC10 PE=4 SV=1
Length = 116
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGV-KIKRKQRLVRKEIDPVISYD 59
M FCP C N+L E N+ + + L C TCPY I K + + + LV +E+ D
Sbjct: 11 MIFCPLCKNILNIE--NIANVNNLVCVTCPYTYKINKDINRTTTMKTLVVEEVSG--GDD 66
Query: 60 DMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
+ K A T + +C C +D A + E+Q RSADEP TIFY C KC+ W+E+
Sbjct: 67 EYKYASTCQKKCIKCDNDVALFMELQTRSADEPMTIFYQC--TKCKTNWKEN 116
>G8JNT8_ERECY (tr|G8JNT8) DNA-directed RNA polymerase subunit OS=Eremothecium
cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166
/ NRRL Y-17582) GN=Ecym_2652 PE=3 SV=1
Length = 112
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C NML + G ++ C +CPY IE G++I +Q L RK++D + +
Sbjct: 2 LSFCPYCKNMLLVSKSDSGL-YKMSCPSCPYEFPIE-GIEIYDRQTLPRKQVDDALGGEG 59
Query: 61 M-KNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T ++CPN C +KA + ++QIRSADEP T FY C+ C ++WRE+
Sbjct: 60 AWDNVDQTAIQCPNHETCGGEKAYFFQLQIRSADEPMTTFYKCVT--CGNKWREN 112
>F4RSB7_MELLP (tr|F4RSB7) DNA-directed RNA polymerase subunit OS=Melampsora
larici-populina (strain 98AG31 / pathotype 3-4-7)
GN=MELLADRAFT_37278 PE=3 SV=1
Length = 114
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 4 CPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM-K 62
CP+C NML G N + CQ+CPY + + + L RKE+D V+ ++ K
Sbjct: 11 CPTCGNMLVVSRAT-GEN-KFECQSCPYEYPVYRN--YTDRTVLSRKEVDDVLGGEEAWK 66
Query: 63 NAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N TE CP C +++A Y ++QIRSADEP T FY C +C QWR+
Sbjct: 67 NVDQTEAPCPKCENNRAFYMQLQIRSADEPMTTFYRCTVSQCSTQWRD 114
>Q6DGU0_DANRE (tr|Q6DGU0) DNA-directed RNA polymerase subunit OS=Danio rerio
GN=polr3k PE=3 SV=1
Length = 108
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQRCF--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108
>B9PK71_TOXGO (tr|B9PK71) DNA-directed RNA polymerase subunit OS=Toxoplasma
gondii GN=TGGT1_088510 PE=3 SV=1
Length = 106
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEID-PVISYDDM 61
FCP+C NML L + C+TCPYV I++ K+ RK L K+ D P+ +
Sbjct: 4 FCPTCHNML---LVRQEVTMQFHCRTCPYVFNIKE--KLTRKMPLTPKKADEPLDESQEA 58
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
CP CSH +A + E+QIRSADEP T FY C N CR +WRE+
Sbjct: 59 ARGAKAPASCPKCSHTEAYFYEIQIRSADEPMTAFYCCCN--CRFRWREN 106
>E3TE49_ICTPU (tr|E3TE49) DNA-directed RNA polymerase subunit OS=Ictalurus
punctatus GN=RPC10 PE=3 SV=1
Length = 108
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLVVEEGQRCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCSPQCGHRWRD 108
>E3TCX2_9TELE (tr|E3TCX2) DNA-directed RNA polymerase subunit OS=Ictalurus
furcatus GN=RPC10 PE=3 SV=1
Length = 108
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLVVEEGQRCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGSA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + +C H+WR+
Sbjct: 58 AWENVDSTAEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCSPQCGHRWRD 108
>Q2H571_CHAGB (tr|Q2H571) DNA-directed RNA polymerase subunit OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=CHGG_06194 PE=3 SV=1
Length = 111
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP C+N+L + G N RL C+TCPY IE + I ++ RKE + V
Sbjct: 5 FCPYCANLLILSRMDTGGN-RLECRTCPYQHAIE--MPIYSRKNFPRKEKEDVFGGPGAW 61
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP +C+ D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 62 DNAQKGRVQCPTPDCNGDEAAFFQVQIRSADEPMTTFYKCMT--CGHRWREN 111
>I2K2J8_DEKBR (tr|I2K2J8) DNA-directed RNA polymerase subunit OS=Dekkera
bruxellensis AWRI1499 GN=AWRI1499_0533 PE=3 SV=1
Length = 112
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP CSNML ++ C TCPY I G+++ ++ L RK +D V+ +
Sbjct: 2 LTFCPYCSNMLVVTRSETTGSNTFSCPTCPYEFPI-VGLQMFERKELPRKVVDDVLGGEG 60
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP C +KA Y ++QIRSADEP T FY C KC H+WRE+
Sbjct: 61 AWDNVDQTNAQCPVETCGSNKAYYFQIQIRSADEPMTTFYKCC--KCGHRWREN 112
>L7IXL0_MAGOR (tr|L7IXL0) DNA-directed RNA polymerase subunit OS=Magnaporthe
oryzae P131 GN=OOW_P131scaffold01299g28 PE=3 SV=1
Length = 110
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC+N+L G N RL C+TCPY I + + ++ RKE + V
Sbjct: 4 FCPSCANVLTVSAMETGKN-RLECRTCPYEFAINE--PLFSRKEFARKEREDVFGGPGAW 60
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP NC ++AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 61 DNAQKGRVQCPADNCDGEEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 110
>L7ICR5_MAGOR (tr|L7ICR5) DNA-directed RNA polymerase subunit OS=Magnaporthe
oryzae Y34 GN=OOU_Y34scaffold00308g24 PE=3 SV=1
Length = 110
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC+N+L G N RL C+TCPY I + + ++ RKE + V
Sbjct: 4 FCPSCANVLTVSAMETGKN-RLECRTCPYEFAINE--PLFSRKEFARKEREDVFGGPGAW 60
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP NC ++AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 61 DNAQKGRVQCPADNCDGEEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 110
>G5EHE0_MAGO7 (tr|G5EHE0) DNA-directed RNA polymerase subunit OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=MGCH7_ch7g875 PE=3 SV=1
Length = 110
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC+N+L G N RL C+TCPY I + + ++ RKE + V
Sbjct: 4 FCPSCANVLTVSAMETGKN-RLECRTCPYEFAINE--PLFSRKEFARKEREDVFGGPGAW 60
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP NC ++AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 61 DNAQKGRVQCPADNCDGEEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 110
>F0Y761_AURAN (tr|F0Y761) DNA-directed RNA polymerase subunit OS=Aureococcus
anophagefferens GN=AURANDRAFT_24870 PE=3 SV=1
Length = 112
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS---RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVIS 57
M+FCP +L+ + G + R FC CPY+ +K K RK+ID ++
Sbjct: 1 MQFCPYDGTLLQVHIFAQGTPASELRFFCPLCPYIHSPKK--KHALDVPTTRKKIDDIMG 58
Query: 58 YDDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
D +N T V CP CSH +A + ++QIRSADEP T F+ C C H+W E
Sbjct: 59 GDAAWENVDRTAVTCPACSHGEAFFMQLQIRSADEPMTTFFKCAKTGCGHRWNE 112
>G0S1W3_CHATD (tr|G0S1W3) DNA-directed RNA polymerase subunit OS=Chaetomium
thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0015050 PE=3 SV=1
Length = 111
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP C+NML G N RL C+TCPY IE + I ++ R+E + V
Sbjct: 5 FCPYCANMLILSRMETGGN-RLECRTCPYQHPIE--MPIYSRKHFTRREKEDVFGGPGAW 61
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CP +C D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 62 DNAQKGRVQCPTADCPGDEAAFFQVQIRSADEPMTTFYKCMT--CGHRWREN 111
>G8C0H9_TETPH (tr|G8C0H9) DNA-directed RNA polymerase subunit OS=Tetrapisispora
phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL
Y-8282 / UCD 70-5) GN=TPHA0M01190 PE=3 SV=1
Length = 110
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP C+NML + + +L C +CPY IE +++ +++L RKEID V+
Sbjct: 2 LSFCPLCNNMLLISNADSSVH-KLTCHSCPYEFPIEN-IEVYDRKKLERKEIDDVLG-GG 58
Query: 61 MKNAPTTEVRCPN---CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T+V+CPN C + A + ++QIRSADEP T FY C+N C +W+E+
Sbjct: 59 WDNVDQTKVQCPNYDKCGGESAYFFQLQIRSADEPMTTFYKCVN--CGKRWKEN 110
>B5X6F8_SALSA (tr|B5X6F8) DNA-directed RNA polymerase subunit OS=Salmo salar
GN=RPC10 PE=3 SV=1
Length = 108
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E + R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQKCY--RFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T +CP C H +A + ++Q RSADE T FY C N +C H+WR+
Sbjct: 58 AWENVDSTPEKCPKCEHPRAFFMQIQTRSADESMTTFYKCCNYECGHRWRD 108
>F0XK34_GROCL (tr|F0XK34) DNA-directed RNA polymerase subunit OS=Grosmannia
clavigera (strain kw1407 / UAMH 11150) GN=CMQ_5003 PE=3
SV=1
Length = 118
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 3 FCPSCSNMLKFEL-PNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM 61
FCP C+N+L P+ G N RL C+TCPY I + +R VRKE + V +
Sbjct: 11 FCPCCANVLTVSAHPDTGRN-RLECRTCPYEYAITTPLFSRRD--FVRKEKEDVFGGEGA 67
Query: 62 -KNAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA T+V+CP C D+AA+ ++QIRSADEP T F+ C+ C H WRE+
Sbjct: 68 WDNAQKTKVQCPTDRCDGDEAAFFQVQIRSADEPMTSFFKCMT--CGHGWREN 118
>C7YMJ1_NECH7 (tr|C7YMJ1) DNA-directed RNA polymerase subunit OS=Nectria
haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596
/ MPVI) GN=NECHADRAFT_35927 PE=3 SV=1
Length = 126
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ CP C+N+L N N RL C+TCP+ +I + V +R V KE D
Sbjct: 18 LAVCPHCANILTVSFTNTRTN-RLECRTCPFEHHITEPVFSRRMYERVEKE-DVFGGPGA 75
Query: 61 MKNAPTTEVRCPN--CSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA V+CPN C+ D+AA+ ++QIRSADEP T FY C+ C H+WRE+
Sbjct: 76 WDNAQKGRVQCPNDGCNGDEAAFFQVQIRSADEPMTSFYKCMT--CGHRWREN 126
>G3PLH8_GASAC (tr|G3PLH8) DNA-directed RNA polymerase subunit OS=Gasterosteus
aculeatus GN=POLR3K PE=3 SV=1
Length = 108
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVEEGQ--KCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C +C H+WR+
Sbjct: 58 AWENVDSTPETCPKCGHLRAYFMQIQTRSADEPMTTFYKCCQAQCGHRWRD 108
>K1W5T7_MARBU (tr|K1W5T7) DNA-directed RNA polymerase subunit OS=Marssonina
brunnea f. sp. multigermtubi (strain MB_m1) GN=MBM_09616
PE=3 SV=1
Length = 121
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 16 PNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISY-DDMKNAPTTEVRCP-- 72
P G +RL CQTCPY +E+ + ++ VR+E D V D KNA T+++CP
Sbjct: 27 PTNGEINRLECQTCPYQYLLER--RYFERKTFVRQERDDVFGGPDSWKNADKTKIQCPKN 84
Query: 73 NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
C+ D+AA+ +MQIRSADEP T FY C++ C ++WRE
Sbjct: 85 GCNGDEAAFFQMQIRSADEPMTGFYNCMS--CGNRWRE 120
>H2LK93_ORYLA (tr|H2LK93) DNA-directed RNA polymerase subunit OS=Oryzias latipes
GN=LOC101173392 PE=3 SV=1
Length = 108
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNS-RLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYD 59
+ FCP+C N+L E G R C TCPYV + + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE---EGQKCLRFACNTCPYVHNVTRKVNYRKYPKL--KEVDDVLGGA 56
Query: 60 DM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C N +C ++WR+
Sbjct: 57 AAWENVDSTAETCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNAQCGNRWRD 108
>B5Y459_PHATC (tr|B5Y459) DNA-directed RNA polymerase subunit OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=RPC11 PE=3 SV=1
Length = 111
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Query: 1 MEFCPSCSNMLKFELPNMG---HNSRLFCQTCPYVCYIE--KGVKIKRKQRLVRKEIDPV 55
M FCP +L+ ++ + NS +C TCPY C I+ + VK K+++V +
Sbjct: 1 MWFCPLDGTLLQVQIRSGAVPAENSFFYCSTCPYSCSIDAPRTVKTPTKRKVVDDILGGA 60
Query: 56 ISYDDMKNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+++ N T CP C+H++A + +MQIRSADEP +IFY C+ +C HQW +
Sbjct: 61 AAWE---NVDRTMAVCPACNHNEAYFMQMQIRSADEPMSIFYKCV--QCSHQWND 110
>C3KJD5_ANOFI (tr|C3KJD5) DNA-directed RNA polymerase subunit OS=Anoplopoma
fimbria GN=RPC10 PE=3 SV=1
Length = 108
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C N+L E R C TCPYV I + V ++ +L KE+D V+
Sbjct: 2 LLFCPTCGNVLIVE--EGQKCMRFACNTCPYVHNITRKVNNRKYPKL--KEVDDVLGGAA 57
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T CP C H +A + ++Q RSADEP T FY C + C H+WR+
Sbjct: 58 AWENVDSTPETCPKCGHLRAYFMQIQTRSADEPMTTFYKCCSAPCGHRWRD 108
>G3BCR7_CANTC (tr|G3BCR7) DNA-directed RNA polymerase subunit OS=Candida tenuis
(strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 /
NBRC 10315 / NRRL Y-1498 / VKM Y-70)
GN=CANTEDRAFT_116921 PE=3 SV=1
Length = 101
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 19 GHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM-KNAPTTEVRCP--NCS 75
G +++ +C TCPY I G ++ K+ L RKE+D V+ + N T +CP +C
Sbjct: 9 GDSNKFYCPTCPYEFKIS-GFQMFDKKVLPRKEVDDVLGGEGAWDNVDQTPAQCPRDSCG 67
Query: 76 HDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
DKA + ++QIRSADEP T FY C+ KC HQWRE+
Sbjct: 68 GDKAYFFQLQIRSADEPMTTFYKCV--KCSHQWREN 101
>M4GGL7_MAGP6 (tr|M4GGL7) DNA-directed RNA polymerase subunit OS=Magnaporthe poae
(strain ATCC 64411 / 73-15) PE=3 SV=1
Length = 110
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C+N+L + G N RL C+TCPY I + + ++ VRKE + V
Sbjct: 4 FCPNCANVLTVSPMDTGKN-RLECRTCPYEFAISE--PLFSRKDFVRKEREDVFGGPGAW 60
Query: 62 KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
NA +V+CP C D+AA+ ++QIRSADEP T F+ C+ C H+WRE+
Sbjct: 61 DNAQKAKVQCPADGCDGDEAAFFQVQIRSADEPMTSFFKCM--ACGHRWREN 110
>D8QIT0_SCHCM (tr|D8QIT0) DNA-directed RNA polymerase subunit OS=Schizophyllum
commune (strain H4-8 / FGSC 9210) GN=SCHCODRAFT_61335
PE=3 SV=1
Length = 110
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 11/115 (9%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C+N+L + G N + C TCPY I K ++ + R+ RKEID V D+
Sbjct: 1 MLFCPTCANLLVIS-SDTGLN-KWSCNTCPYEFPITK--QMTTRTRMKRKEIDDVFGGDE 56
Query: 61 M-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPAT----IFYWCLNEKCRHQWRE 110
K+A +T +C CSHD+A + ++QIRSADEP T I + C + C ++WRE
Sbjct: 57 QWKHAQSTMAQCEACSHDRAYFYQLQIRSADEPMTTWALIIFRCAS--CGNRWRE 109
>A9UWA6_MONBE (tr|A9UWA6) DNA-directed RNA polymerase subunit OS=Monosiga
brevicollis GN=18537 PE=3 SV=1
Length = 109
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP C NML + + H C TCPY + + R+ + D + D
Sbjct: 1 MIFCPLCGNMLIMQ--SSLHGYFFGCNTCPYKHELGEHRVTARRSMHHDERADEIYGGDS 58
Query: 61 MKNA-PTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
K TE CP C H++A+Y + Q RSADEP+T+FY C EKC H+W +
Sbjct: 59 AKEMMDMTEADCPKCHHNRASYVQQQTRSADEPSTVFYCC--EKCNHKWND 107
>F2QUX4_PICP7 (tr|F2QUX4) DNA-directed RNA polymerase subunit OS=Komagataella
pastoris (strain ATCC 76273 / CBS 7435 / CECT 11047 /
NRRL Y-11430 / Wegner 21-1) GN=PP7435_Chr3-0230 PE=3
SV=1
Length = 111
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C NML N R C TCPY I G+++ ++ L RK++D V+
Sbjct: 2 LMFCPNCQNMLTVTKAADSIN-RFNCPTCPYEFPI-VGMQMYERKDLSRKQVDDVLGGAG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T F C KC HQWRE+
Sbjct: 60 AWDNVDQTGAQCPIDSCGGDKAYFFQLQIRSADEPMTTFLKCC--KCGHQWREN 111
>C4R616_PICPG (tr|C4R616) DNA-directed RNA polymerase subunit OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0942
PE=3 SV=1
Length = 111
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
+ FCP+C NML N R C TCPY I G+++ ++ L RK++D V+
Sbjct: 2 LMFCPNCQNMLTVTKAADSIN-RFNCPTCPYEFPI-VGMQMYERKDLSRKQVDDVLGGAG 59
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111
N T +CP +C DKA + ++QIRSADEP T F C KC HQWRE+
Sbjct: 60 AWDNVDQTGAQCPIDSCGGDKAYFFQLQIRSADEPMTTFLKCC--KCGHQWREN 111
>M7PJ52_9ASCO (tr|M7PJ52) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_01197 PE=4 SV=1
Length = 109
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60
M FCP+C N L G+N R C+TCPY I++ + KR + +KE+D V+ +
Sbjct: 1 MIFCPACGNHLLIGTSIAGYN-RFECRTCPYEFPIDRYLYSKRMMK--QKEVDDVLGGEK 57
Query: 61 M-KNAPTTEVRCP--NCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
N T+ +CP +C KA + ++QIRSADEP T FY C+ KC ++WRE
Sbjct: 58 AWDNVDKTDAQCPATDCGSLKAYFFQIQIRSADEPMTTFYKCI--KCGYRWRE 108
>C1BS50_9MAXI (tr|C1BS50) DNA-directed RNA polymerase subunit OS=Lepeophtheirus
salmonis GN=RPC10 PE=3 SV=1
Length = 108
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 1 MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLV--RKEIDPVISY 58
+ FCP+C N+L R C+TCPY ++ V + R+ KE+D V+
Sbjct: 2 LMFCPNCGNILGVVEGVTDSCMRFACETCPY----KRNVVSRLSDRVYPKLKEVDDVLGG 57
Query: 59 DDM-KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE CPNC H +A + ++Q RSADEP T FY C++ C H+WRE
Sbjct: 58 SAAWENVDSTEETCPNCDHHRAYFMQIQTRSADEPMTTFYKCVS--CGHRWRE 108
>B3S471_TRIAD (tr|B3S471) DNA-directed RNA polymerase subunit OS=Trichoplax
adhaerens GN=TRIADDRAFT_28961 PE=3 SV=1
Length = 106
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCP+C+N L E G C TCPY+ + K + + +L K++D ++
Sbjct: 4 FCPNCANALYME--KQGECLVFLCHTCPYLYKVTKTIASRNYPKL--KQVDDILGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +TE CP C H++A + ++Q RSADEP T+FY C + C H+W++
Sbjct: 60 ENVDSTEATCPKCDHNQAFFMQIQTRSADEPMTVFYKCCS--CGHRWKD 106
>B4HQM8_DROSE (tr|B4HQM8) DNA-directed RNA polymerase subunit OS=Drosophila
sechellia GN=Dsec\GM19771 PE=3 SV=1
Length = 325
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 3 FCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDDM- 61
FCPSC N+L E H R C TCPY+ I + + K RL KE+D V+
Sbjct: 4 FCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRKISTKTFPRL--KEVDHVLGGKAAW 59
Query: 62 KNAPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110
+N +T+ CP C H +A + ++Q RSADEP T FY + +HQ E
Sbjct: 60 ENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFY----NRMQHQASE 104