Miyakogusa Predicted Gene

Lj1g3v3891930.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3891930.3 tr|G7KPD6|G7KPD6_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_6g087700,70.21,0.0000005,PRONE,Plant specific Rop nucleotide
exchanger, PRONE,CUFF.31366.3
         (58 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F6LPV1_MEDTR (tr|F6LPV1) RopGEF8 OS=Medicago truncatula PE=2 SV=1      59   7e-07
G7KPD6_MEDTR (tr|G7KPD6) Rop guanine nucleotide exchange factor ...    59   7e-07
I1L4J5_SOYBN (tr|I1L4J5) Uncharacterized protein OS=Glycine max ...    58   1e-06
I1KIP8_SOYBN (tr|I1KIP8) Uncharacterized protein OS=Glycine max ...    58   1e-06

>F6LPV1_MEDTR (tr|F6LPV1) RopGEF8 OS=Medicago truncatula PE=2 SV=1
          Length = 549

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/47 (70%), Positives = 34/47 (72%), Gaps = 4/47 (8%)

Query: 1   MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFGIPSFEQS 47
           M  RFAKLLLGED+SGAGN  SS LALS AITNLA   FG    EQS
Sbjct: 100 MKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG----EQS 142


>G7KPD6_MEDTR (tr|G7KPD6) Rop guanine nucleotide exchange factor OS=Medicago
           truncatula GN=MTR_6g087700 PE=4 SV=1
          Length = 433

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/47 (70%), Positives = 34/47 (72%), Gaps = 4/47 (8%)

Query: 1   MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFGIPSFEQS 47
           M  RFAKLLLGED+SGAGN  SS LALS AITNLA   FG    EQS
Sbjct: 100 MKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG----EQS 142


>I1L4J5_SOYBN (tr|I1L4J5) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 520

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 31/40 (77%)

Query: 1   MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFG 40
           M  RFAKLLLGED+SGAGN  SS LALS AITNLA   FG
Sbjct: 96  MKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG 135


>I1KIP8_SOYBN (tr|I1KIP8) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 562

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/47 (70%), Positives = 34/47 (72%), Gaps = 4/47 (8%)

Query: 1   MTFRFAKLLLGEDISGAGNDASSTLALSYAITNLATQHFGIPSFEQS 47
           M  RFAKLLLGED+SGAGN  SS LALS AITNLA   FG    EQS
Sbjct: 95  MKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFG----EQS 137