Miyakogusa Predicted Gene

Lj1g3v3597220.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3597220.2 Non Chatacterized Hit- tr|C0HE90|C0HE90_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,49,6e-16, ,CUFF.30958.2
         (106 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0HE90_MAIZE (tr|C0HE90) Uncharacterized protein OS=Zea mays PE=...    89   8e-16
C0PB94_MAIZE (tr|C0PB94) Uncharacterized protein OS=Zea mays PE=...    83   4e-14

>C0HE90_MAIZE (tr|C0HE90) Uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 198

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 66/100 (66%)

Query: 3   EEELATEPGVLVEDPSTGISGEDVFLVVGSWGKLLEPFLGDVDLAVSGASVDLFEAVGVR 62
           E++LA +  VLVE    G + E V L+VG W +L+EP L DVDLA+ GA VD+ EAVG R
Sbjct: 53  EDDLAAQARVLVELAVPGRAREHVPLLVGRWRQLVEPLLRDVDLALGGARVDILEAVGGR 112

Query: 63  VDEALVDEGFEDGVAGETNHVVLLAFEVDGGEAHDAVGDL 102
           +DE  V E  E+ + GE + +     E+DG +AHDA+GDL
Sbjct: 113 LDELRVGERAEECLPGEADDLAARPLEIDGEDAHDAIGDL 152


>C0PB94_MAIZE (tr|C0PB94) Uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 191

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 64/100 (64%)

Query: 3   EEELATEPGVLVEDPSTGISGEDVFLVVGSWGKLLEPFLGDVDLAVSGASVDLFEAVGVR 62
           E++LA +  VLVE    G + E V L+VG W +L++P L DVDLA+ GA VD+ EAVG R
Sbjct: 52  EDDLAAQARVLVELAVPGRAREHVSLLVGRWWQLVKPLLRDVDLALGGARVDILEAVGGR 111

Query: 63  VDEALVDEGFEDGVAGETNHVVLLAFEVDGGEAHDAVGDL 102
           +DE  V +  ++ +  E +H+      +DG +AHDAV DL
Sbjct: 112 LDEPRVGQSAKECLPREADHIAARPVGIDGEDAHDAVSDL 151