Miyakogusa Predicted Gene
- Lj1g3v3330190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3330190.1 Non Chatacterized Hit- tr|I1JSC1|I1JSC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16027
PE,86.62,0,SIGMA70_2,RNA polymerase sigma-70 factor; sigma70-ECF: RNA
polymerase sigma factor, sigma-70,RNA pol,CUFF.30455.1
(565 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max ... 751 0.0
G7J988_MEDTR (tr|G7J988) RNA polymerase sigma factor rpoD OS=Med... 644 0.0
D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vit... 607 e-171
B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, puta... 603 e-170
M5VUM6_PRUPE (tr|M5VUM6) Uncharacterized protein OS=Prunus persi... 579 e-162
K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lyco... 577 e-162
M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tube... 575 e-161
R0IC61_9BRAS (tr|R0IC61) Uncharacterized protein OS=Capsella rub... 561 e-157
B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarp... 558 e-156
D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Ara... 553 e-155
B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarp... 546 e-153
Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis a... 540 e-151
M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rap... 539 e-150
M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acumina... 538 e-150
Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=si... 538 e-150
M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acumina... 525 e-146
M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rap... 523 e-146
R0IRV2_9BRAS (tr|R0IRV2) Uncharacterized protein OS=Capsella rub... 424 e-116
J3N844_ORYBR (tr|J3N844) Uncharacterized protein OS=Oryza brachy... 373 e-100
Q9ZPL2_MAIZE (tr|Q9ZPL2) Sigma factor SIG2A OS=Zea mays GN=sig2A... 371 e-100
K7UQN4_MAIZE (tr|K7UQN4) Sigma factor SIG2A OS=Zea mays GN=ZEAMM... 371 e-100
Q7XXT0_ORYSJ (tr|Q7XXT0) Plastid sigma factor 2A OS=Oryza sativa... 370 e-100
Q53JE7_ORYSJ (tr|Q53JE7) Sigma-70 region 3, putative OS=Oryza sa... 355 2e-95
K3ZHZ3_SETIT (tr|K3ZHZ3) Uncharacterized protein OS=Setaria ital... 355 2e-95
I1QZW7_ORYGL (tr|I1QZW7) Uncharacterized protein OS=Oryza glaber... 355 3e-95
Q53KH8_ORYSJ (tr|Q53KH8) Os11g0448400 protein OS=Oryza sativa su... 354 5e-95
B8AUZ3_ORYSI (tr|B8AUZ3) Putative uncharacterized protein OS=Ory... 354 6e-95
K3ZHZ1_SETIT (tr|K3ZHZ1) Uncharacterized protein OS=Setaria ital... 353 7e-95
F2CZB8_HORVD (tr|F2CZB8) Predicted protein OS=Hordeum vulgare va... 352 3e-94
M0XE63_HORVD (tr|M0XE63) Uncharacterized protein OS=Hordeum vulg... 351 3e-94
M0XE64_HORVD (tr|M0XE64) Uncharacterized protein OS=Hordeum vulg... 351 4e-94
K4A8A6_SETIT (tr|K4A8A6) Uncharacterized protein OS=Setaria ital... 350 7e-94
I1ILU6_BRADI (tr|I1ILU6) Uncharacterized protein OS=Brachypodium... 348 4e-93
I1H713_BRADI (tr|I1H713) Uncharacterized protein OS=Brachypodium... 344 4e-92
C5WQ19_SORBI (tr|C5WQ19) Putative uncharacterized protein Sb01g0... 342 2e-91
M8AUB6_AEGTA (tr|M8AUB6) RNA polymerase sigma factor rpoD OS=Aeg... 340 1e-90
Q10NF3_ORYSJ (tr|Q10NF3) Sigma-70 region 3 family protein, expre... 337 6e-90
F1DJX7_MAIZE (tr|F1DJX7) SIGMA70-like transcription factor (Frag... 337 1e-89
J3LME6_ORYBR (tr|J3LME6) Uncharacterized protein OS=Oryza brachy... 336 2e-89
Q9ZPL1_MAIZE (tr|Q9ZPL1) Sigma factor SIG2B OS=Zea mays GN=sig2B... 335 3e-89
I1P9X2_ORYGL (tr|I1P9X2) Uncharacterized protein OS=Oryza glaber... 332 2e-88
Q84Q84_ORYSJ (tr|Q84Q84) Os03g0271100 protein OS=Oryza sativa su... 330 8e-88
A2XF08_ORYSI (tr|A2XF08) Putative uncharacterized protein OS=Ory... 330 1e-87
A3AGH1_ORYSJ (tr|A3AGH1) Putative uncharacterized protein OS=Ory... 330 1e-87
B8LLW6_PICSI (tr|B8LLW6) Putative uncharacterized protein OS=Pic... 327 1e-86
Q9AYR7_9BRYO (tr|Q9AYR7) PpSIG2 OS=Physcomitrella patens GN=Sig2... 326 1e-86
E1C9M6_PHYPA (tr|E1C9M6) Plastid sigma facor SIG2 OS=Physcomitre... 326 1e-86
B8LQB0_PICSI (tr|B8LQB0) Putative uncharacterized protein OS=Pic... 326 2e-86
K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 O... 324 7e-86
M0XE65_HORVD (tr|M0XE65) Uncharacterized protein (Fragment) OS=H... 322 2e-85
A9RTR4_PHYPA (tr|A9RTR4) Uncharacterized protein OS=Physcomitrel... 306 2e-80
K9Q1H6_9CYAN (tr|K9Q1H6) RNA polymerase sigma factor OS=Leptolyn... 281 7e-73
D4TQC8_9NOST (tr|D4TQC8) RNA polymerase sigma factor OS=Raphidio... 280 1e-72
Q59965_SYNP2 (tr|Q59965) RNA polymerase sigma factor OS=Synechoc... 280 1e-72
D7E0K7_NOSA0 (tr|D7E0K7) RNA polymerase sigma factor OS=Nostoc a... 278 3e-72
Q017N3_OSTTA (tr|Q017N3) SigA (ISS) OS=Ostreococcus tauri GN=Ot0... 278 3e-72
A4RYI5_OSTLU (tr|A4RYI5) Predicted protein OS=Ostreococcus lucim... 278 3e-72
D4TFK7_9NOST (tr|D4TFK7) RNA polymerase sigma factor OS=Cylindro... 278 5e-72
K9ZHC6_ANACC (tr|K9ZHC6) RNA polymerase sigma factor OS=Anabaena... 277 7e-72
K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindro... 276 1e-71
Q3MDA3_ANAVT (tr|Q3MDA3) RNA polymerase sigma factor OS=Anabaena... 276 2e-71
K9PJQ4_9CYAN (tr|K9PJQ4) RNA polymerase sigma factor OS=Calothri... 276 2e-71
K9XY46_STAC7 (tr|K9XY46) RNA polymerase sigma factor OS=Stanieri... 275 2e-71
A0ZJC3_NODSP (tr|A0ZJC3) RNA polymerase sigma factor OS=Nodulari... 275 2e-71
K9TYL7_9CYAN (tr|K9TYL7) RNA polymerase sigma factor OS=Chroococ... 275 3e-71
K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocap... 275 3e-71
Q9L4T2_NOSP7 (tr|Q9L4T2) RNA polymerase sigma factor OS=Nostoc p... 275 3e-71
F5UG89_9CYAN (tr|F5UG89) RNA polymerase sigma factor OS=Microcol... 275 3e-71
K9Q8G4_9NOSO (tr|K9Q8G4) RNA polymerase sigma factor OS=Nostoc s... 275 4e-71
K9V2E9_9CYAN (tr|K9V2E9) RNA polymerase sigma factor OS=Calothri... 275 4e-71
F4XPJ0_9CYAN (tr|F4XPJ0) RNA polymerase sigma factor OS=Moorea p... 275 4e-71
K9S7N4_9CYAN (tr|K9S7N4) RNA polymerase sigma factor OS=Geitleri... 275 4e-71
K9QTZ2_NOSS7 (tr|K9QTZ2) RNA polymerase sigma factor OS=Nostoc s... 275 5e-71
M1WSP5_9NOST (tr|M1WSP5) RNA polymerase sigma factor OS=Richelia... 275 5e-71
K7W4G2_9NOST (tr|K7W4G2) RNA polymerase sigma factor OS=Anabaena... 274 6e-71
B4WPM0_9SYNE (tr|B4WPM0) RNA polymerase sigma factor OS=Synechoc... 274 6e-71
K9VRX0_9CYAN (tr|K9VRX0) RNA polymerase sigma factor OS=Oscillat... 274 6e-71
G6FUP1_9CYAN (tr|G6FUP1) RNA polymerase sigma factor OS=Fischere... 274 6e-71
K8GQ72_9CYAN (tr|K8GQ72) RNA polymerase sigma factor OS=Oscillat... 274 7e-71
D8G4S3_9CYAN (tr|D8G4S3) RNA polymerase sigma factor OS=Oscillat... 274 9e-71
K9R7S3_9CYAN (tr|K9R7S3) RNA polymerase sigma factor OS=Rivulari... 273 2e-70
K9TM07_9CYAN (tr|K9TM07) RNA polymerase sigma factor OS=Oscillat... 272 2e-70
K9UM88_9CHRO (tr|K9UM88) RNA polymerase sigma factor OS=Chamaesi... 272 3e-70
Q10UV2_TRIEI (tr|Q10UV2) RNA polymerase sigma factor OS=Trichode... 271 4e-70
K9WH45_9CYAN (tr|K9WH45) RNA polymerase sigma factor OS=Microcol... 271 4e-70
K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothec... 271 5e-70
K9Z8E6_CYAAP (tr|K9Z8E6) RNA polymerase sigma factor OS=Cyanobac... 271 6e-70
B0CDC4_ACAM1 (tr|B0CDC4) RNA polymerase sigma factor OS=Acaryoch... 271 6e-70
A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya ... 271 8e-70
B4W0Y8_9CYAN (tr|B4W0Y8) RNA polymerase sigma factor OS=Coleofas... 270 9e-70
L8L5U0_9SYNC (tr|L8L5U0) RNA polymerase sigma factor OS=Synechoc... 270 1e-69
A2C7M0_PROM3 (tr|A2C7M0) RNA polymerase sigma factor OS=Prochlor... 270 1e-69
Q7V698_PROMM (tr|Q7V698) RNA polymerase sigma factor OS=Prochlor... 270 1e-69
C1MUC7_MICPC (tr|C1MUC7) Predicted protein OS=Micromonas pusilla... 270 1e-69
A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrel... 270 1e-69
A9RG56_PHYPA (tr|A9RG56) Uncharacterized protein OS=Physcomitrel... 270 1e-69
E0UHZ3_CYAP2 (tr|E0UHZ3) RNA polymerase sigma factor OS=Cyanothe... 270 1e-69
B7KDV7_CYAP7 (tr|B7KDV7) RNA polymerase sigma factor OS=Cyanothe... 270 2e-69
K9YJV2_CYASC (tr|K9YJV2) RNA polymerase sigma factor OS=Cyanobac... 268 4e-69
L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocap... 268 4e-69
B5ILG7_9CHRO (tr|B5ILG7) RNA polymerase sigma factor OS=Cyanobiu... 268 5e-69
B8HPM3_CYAP4 (tr|B8HPM3) RNA polymerase sigma factor OS=Cyanothe... 268 5e-69
G4FIM1_9SYNE (tr|G4FIM1) RNA polymerase sigma factor OS=Synechoc... 267 8e-69
A4CRY9_SYNPV (tr|A4CRY9) RNA polymerase sigma factor OS=Synechoc... 267 1e-68
C6JRK5_SORBI (tr|C6JRK5) Putative uncharacterized protein Sb0010... 266 1e-68
Q7U5C4_SYNPX (tr|Q7U5C4) RNA polymerase sigma factor OS=Synechoc... 266 2e-68
K9T849_9CYAN (tr|K9T849) RNA polymerase sigma factor OS=Pleuroca... 266 2e-68
K9W354_9CYAN (tr|K9W354) RNA polymerase sigma factor OS=Crinaliu... 266 2e-68
Q05YJ7_9SYNE (tr|Q05YJ7) RNA polymerase sigma factor OS=Synechoc... 266 2e-68
Q3AWQ6_SYNS9 (tr|Q3AWQ6) RNA polymerase sigma factor OS=Synechoc... 266 2e-68
C7QR23_CYAP0 (tr|C7QR23) RNA polymerase sigma factor OS=Cyanothe... 265 3e-68
B7K1V2_CYAP8 (tr|B7K1V2) RNA polymerase sigma factor OS=Cyanothe... 265 3e-68
A5GJC2_SYNPW (tr|A5GJC2) RNA polymerase sigma factor OS=Synechoc... 265 3e-68
D0CLH5_9SYNE (tr|D0CLH5) RNA polymerase sigma factor OS=Synechoc... 265 3e-68
A5GSD3_SYNR3 (tr|A5GSD3) RNA polymerase sigma factor OS=Synechoc... 265 3e-68
A2C0V5_PROM1 (tr|A2C0V5) RNA polymerase sigma factor OS=Prochlor... 265 3e-68
Q46GS6_PROMT (tr|Q46GS6) RNA polymerase sigma factor OS=Prochlor... 265 3e-68
Q3ALS7_SYNSC (tr|Q3ALS7) RNA polymerase sigma factor OS=Synechoc... 264 6e-68
Q0I8I7_SYNS3 (tr|Q0I8I7) RNA polymerase sigma factor OS=Synechoc... 264 8e-68
B1X5Q2_PAUCH (tr|B1X5Q2) RNA polymerase sigma factor OS=Paulinel... 263 1e-67
L8LB48_9CYAN (tr|L8LB48) RNA polymerase sigma factor OS=Leptolyn... 263 1e-67
A9BEB7_PROM4 (tr|A9BEB7) RNA polymerase sigma factor OS=Prochlor... 263 1e-67
K9EXS2_9CYAN (tr|K9EXS2) RNA polymerase sigma factor OS=Leptolyn... 262 2e-67
K9SJF8_9CYAN (tr|K9SJF8) RNA polymerase sigma factor OS=Pseudana... 261 4e-67
K9P2V4_CYAGP (tr|K9P2V4) RNA polymerase sigma factor OS=Cyanobiu... 261 4e-67
Q5N3Q1_SYNP6 (tr|Q5N3Q1) RNA polymerase sigma factor OS=Synechoc... 261 5e-67
K6DHZ3_SPIPL (tr|K6DHZ3) RNA polymerase sigma factor OS=Arthrosp... 261 6e-67
D5A0H0_SPIPL (tr|D5A0H0) RNA polymerase sigma factor OS=Arthrosp... 261 6e-67
H1WE70_9CYAN (tr|H1WE70) RNA polymerase sigma factor OS=Arthrosp... 261 6e-67
B5VWQ7_SPIMA (tr|B5VWQ7) RNA polymerase sigma factor OS=Arthrosp... 261 6e-67
K1X4L7_SPIPL (tr|K1X4L7) RNA polymerase sigma factor OS=Arthrosp... 261 7e-67
Q7NHG5_GLOVI (tr|Q7NHG5) RNA polymerase sigma factor OS=Gloeobac... 260 8e-67
L8M7W7_9CYAN (tr|L8M7W7) RNA polymerase sigma factor OS=Xenococc... 260 1e-66
K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechoc... 259 2e-66
Q7VD88_PROMA (tr|Q7VD88) RNA polymerase sigma factor OS=Prochlor... 259 2e-66
K9SYS4_9SYNE (tr|K9SYS4) RNA polymerase sigma factor OS=Synechoc... 259 3e-66
K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactyloc... 258 5e-66
Q8DL79_THEEB (tr|Q8DL79) RNA polymerase sigma factor OS=Thermosy... 257 1e-65
A3Z5L5_9SYNE (tr|A3Z5L5) RNA polymerase sigma factor OS=Synechoc... 256 2e-65
K8F5W9_9CHLO (tr|K8F5W9) RNA polymerase sigma factor RpoD OS=Bat... 256 2e-65
Q05RP2_9SYNE (tr|Q05RP2) RNA polymerase sigma factor OS=Synechoc... 256 2e-65
A3YZH3_9SYNE (tr|A3YZH3) RNA polymerase sigma factor OS=Synechoc... 255 3e-65
Q31C37_PROM9 (tr|Q31C37) RNA polymerase sigma factor OS=Prochlor... 253 1e-64
I4IUY9_MICAE (tr|I4IUY9) RNA polymerase sigma factor OS=Microcys... 253 1e-64
A2BVF8_PROM5 (tr|A2BVF8) RNA polymerase sigma factor OS=Prochlor... 253 1e-64
Q7V2I0_PROMP (tr|Q7V2I0) RNA polymerase sigma factor OS=Prochlor... 253 2e-64
I4GV22_MICAE (tr|I4GV22) RNA polymerase sigma factor OS=Microcys... 253 2e-64
A8G3L2_PROM2 (tr|A8G3L2) RNA polymerase sigma factor OS=Prochlor... 253 2e-64
B9P0P2_PROMR (tr|B9P0P2) RNA polymerase sigma factor OS=Prochlor... 253 2e-64
A3PBM1_PROM0 (tr|A3PBM1) RNA polymerase sigma factor OS=Prochlor... 252 2e-64
B0JGK3_MICAN (tr|B0JGK3) RNA polymerase sigma factor OS=Microcys... 252 2e-64
I4HLE0_MICAE (tr|I4HLE0) RNA polymerase sigma factor OS=Microcys... 252 2e-64
I4FLI6_MICAE (tr|I4FLI6) RNA polymerase sigma factor OS=Microcys... 252 3e-64
I4IAI2_9CHRO (tr|I4IAI2) RNA polymerase sigma factor OS=Microcys... 252 3e-64
A2BPX8_PROMS (tr|A2BPX8) RNA polymerase sigma factor OS=Prochlor... 252 3e-64
C1E4E8_MICSR (tr|C1E4E8) Predicted protein OS=Micromonas sp. (st... 252 4e-64
M0XE66_HORVD (tr|M0XE66) Uncharacterized protein OS=Hordeum vulg... 251 4e-64
A9BK56_HEMAN (tr|A9BK56) RpoD OS=Hemiselmis andersenii GN=HAN_1g... 251 4e-64
Q2JS52_SYNJA (tr|Q2JS52) RNA polymerase sigma factor OS=Synechoc... 251 5e-64
I4HZ12_MICAE (tr|I4HZ12) RNA polymerase sigma factor OS=Microcys... 251 5e-64
I4GN30_MICAE (tr|I4GN30) RNA polymerase sigma factor OS=Microcys... 251 5e-64
I4GB76_MICAE (tr|I4GB76) RNA polymerase sigma factor OS=Microcys... 251 5e-64
I4FFA4_MICAE (tr|I4FFA4) RNA polymerase sigma factor OS=Microcys... 251 5e-64
B1PVV9_MICAE (tr|B1PVV9) RNA polymerase sigma factor OS=Microcys... 251 5e-64
I4H3L6_MICAE (tr|I4H3L6) RNA polymerase sigma factor OS=Microcys... 251 5e-64
A8YBI5_MICAE (tr|A8YBI5) RNA polymerase sigma factor OS=Microcys... 251 5e-64
Q8S9D0_GUITH (tr|Q8S9D0) RNA polymerase sigma factor OS=Guillard... 251 6e-64
J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomon... 250 8e-64
L8N2V5_9CYAN (tr|L8N2V5) RNA polymerase sigma factor OS=Pseudana... 250 1e-63
R7QDV9_CHOCR (tr|R7QDV9) Stackhouse genomic scaffold, scaffold_2... 250 1e-63
D3EMZ4_UCYNA (tr|D3EMZ4) RNA polymerase sigma factor OS=cyanobac... 248 6e-63
A3ISY9_9CHRO (tr|A3ISY9) RNA polymerase sigma factor OS=Cyanothe... 248 6e-63
B1WS32_CYAA5 (tr|B1WS32) RNA polymerase sigma factor OS=Cyanothe... 248 7e-63
G6GVW3_9CHRO (tr|G6GVW3) RNA polymerase sigma factor OS=Cyanothe... 248 7e-63
Q98RZ3_GUITH (tr|Q98RZ3) RNA-polymerase sigma factor OS=Guillard... 246 1e-62
M1BY22_SOLTU (tr|M1BY22) Uncharacterized protein OS=Solanum tube... 246 2e-62
M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rap... 246 2e-62
Q4C7J7_CROWT (tr|Q4C7J7) RNA polymerase sigma factor OS=Crocosph... 246 2e-62
G5JAB0_CROWT (tr|G5JAB0) RNA polymerase sigma factor OS=Crocosph... 246 2e-62
B9S0J0_RICCO (tr|B9S0J0) RNA polymerase sigma factor rpoD, putat... 246 2e-62
R7QJX2_CHOCR (tr|R7QJX2) Stackhouse genomic scaffold, scaffold_3... 243 1e-61
I1L8Z5_SOYBN (tr|I1L8Z5) Uncharacterized protein OS=Glycine max ... 243 2e-61
E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungi... 243 2e-61
D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabi... 242 3e-61
K4CQJ3_SOLLC (tr|K4CQJ3) Uncharacterized protein OS=Solanum lyco... 242 3e-61
Q2JJL6_SYNJB (tr|Q2JJL6) RNA polymerase sigma factor OS=Synechoc... 241 4e-61
M5WAB7_PRUPE (tr|M5WAB7) Uncharacterized protein OS=Prunus persi... 241 5e-61
I1LZ84_SOYBN (tr|I1LZ84) Uncharacterized protein OS=Glycine max ... 241 7e-61
G7IA88_MEDTR (tr|G7IA88) RNA polymerase sigma factor OS=Medicago... 239 1e-60
D7TQP0_VITVI (tr|D7TQP0) Putative uncharacterized protein OS=Vit... 239 3e-60
F7ULM9_SYNYG (tr|F7ULM9) RNA polymerase sigma factor OS=Synechoc... 237 8e-60
M1MNH4_9SYNC (tr|M1MNH4) RNA polymerase sigma factor OS=Synechoc... 237 8e-60
H0PJ89_9SYNC (tr|H0PJ89) RNA polymerase sigma factor OS=Synechoc... 237 8e-60
H0PED4_9SYNC (tr|H0PED4) RNA polymerase sigma factor OS=Synechoc... 237 8e-60
H0P220_9SYNC (tr|H0P220) RNA polymerase sigma factor OS=Synechoc... 237 8e-60
K9PYY3_9CYAN (tr|K9PYY3) RNA polymerase, sigma 70 subunit, RpoD ... 236 2e-59
B9MTE1_POPTR (tr|B9MTE1) Predicted protein OS=Populus trichocarp... 236 3e-59
M1BY20_SOLTU (tr|M1BY20) Uncharacterized protein OS=Solanum tube... 235 3e-59
R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rub... 235 3e-59
B4WSK5_9SYNE (tr|B4WSK5) RNA polymerase sigma factor, cyanobacte... 235 4e-59
G7L3V2_MEDTR (tr|G7L3V2) RNA polymerase sigma factor rpoD OS=Med... 234 6e-59
D8UF26_VOLCA (tr|D8UF26) Putative uncharacterized protein OS=Vol... 234 7e-59
B4WG00_9SYNE (tr|B4WG00) RNA polymerase sigma factor OS=Synechoc... 234 9e-59
C7QVB1_CYAP0 (tr|C7QVB1) RNA polymerase, sigma 70 subunit, RpoD ... 234 9e-59
B7JX54_CYAP8 (tr|B7JX54) RNA polymerase, sigma 70 subunit, RpoD ... 234 9e-59
B1XQ38_SYNP2 (tr|B1XQ38) Sigma factor OS=Synechococcus sp. (stra... 234 1e-58
F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomo... 233 1e-58
K9YNZ9_CYASC (tr|K9YNZ9) RNA polymerase sigma factor OS=Cyanobac... 233 1e-58
I4I200_MICAE (tr|I4I200) RNA polymerase sigma factor rpoD3 OS=Mi... 233 2e-58
P96034_SYNSP (tr|P96034) Sigma factor OS=Synechococcus sp. GN=si... 233 2e-58
I4H5M1_MICAE (tr|I4H5M1) RNA polymerase sigma factor rpoD3 OS=Mi... 233 2e-58
M1BY21_SOLTU (tr|M1BY21) Uncharacterized protein OS=Solanum tube... 232 3e-58
L8NM63_MICAE (tr|L8NM63) RNA polymerase sigma factor rpoD2 OS=Mi... 232 3e-58
A8YAB5_MICAE (tr|A8YAB5) Genome sequencing data, contig C249 OS=... 232 3e-58
I4ISK0_MICAE (tr|I4ISK0) RNA polymerase sigma factor rpoD3 OS=Mi... 232 3e-58
I4G0I4_MICAE (tr|I4G0I4) RNA polymerase sigma factor rpoD3 OS=Mi... 231 4e-58
L7E3E5_MICAE (tr|L7E3E5) RNA polymerase sigma factor OS=Microcys... 231 5e-58
I4HQ77_MICAE (tr|I4HQ77) RNA polymerase sigma factor rpoD3 OS=Mi... 231 5e-58
I4GLZ5_MICAE (tr|I4GLZ5) RNA polymerase sigma factor rpoD3 OS=Mi... 231 5e-58
I4FRP5_MICAE (tr|I4FRP5) RNA polymerase sigma factor rpoD3 OS=Mi... 231 5e-58
I4FIK9_MICAE (tr|I4FIK9) RNA polymerase sigma factor rpoD3 OS=Mi... 231 5e-58
K2EUZ1_9BACT (tr|K2EUZ1) RNA polymerase sigma factor OS=uncultur... 231 6e-58
B0JTP4_MICAN (tr|B0JTP4) Group 2 RNA polymerase sigma factor OS=... 231 7e-58
R5SI72_9GAMM (tr|R5SI72) RNA polymerase sigma factor OS=Acinetob... 231 7e-58
K4A7Y8_SETIT (tr|K4A7Y8) Uncharacterized protein OS=Setaria ital... 231 8e-58
Q39515_CYACA (tr|Q39515) Chloroplast RNA polymerase sigma subuni... 231 8e-58
I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Mi... 231 9e-58
I4GS23_MICAE (tr|I4GS23) RNA polymerase sigma factor rpoD3 OS=Mi... 230 9e-58
R6PFH1_9CLOT (tr|R6PFH1) RNA polymerase sigma factor OS=Clostrid... 230 1e-57
K9QYS3_NOSS7 (tr|K9QYS3) RNA polymerase sigma factor, cyanobacte... 230 1e-57
M1V5C7_CYAME (tr|M1V5C7) Sigma subunit for chloroplast RNA polym... 230 1e-57
B0C890_ACAM1 (tr|B0C890) RNA polymerase sigma-70 factor OS=Acary... 230 1e-57
J3MRH6_ORYBR (tr|J3MRH6) Uncharacterized protein OS=Oryza brachy... 230 1e-57
M0SK23_MUSAM (tr|M0SK23) Uncharacterized protein OS=Musa acumina... 229 3e-57
B4FJ30_MAIZE (tr|B4FJ30) SIGMA70-like transcription factor OS=Ze... 228 4e-57
M0WB57_HORVD (tr|M0WB57) Uncharacterized protein OS=Hordeum vulg... 228 5e-57
B5IIC6_9CHRO (tr|B5IIC6) RNA polymerase sigma factor OS=Cyanobiu... 228 5e-57
I3SER7_LOTJA (tr|I3SER7) Uncharacterized protein OS=Lotus japoni... 228 5e-57
R7LWC5_9FUSO (tr|R7LWC5) RNA polymerase sigma factor OS=Fusobact... 228 5e-57
M0WB53_HORVD (tr|M0WB53) Uncharacterized protein OS=Hordeum vulg... 228 5e-57
R7MFB1_9CLOT (tr|R7MFB1) RNA polymerase sigma factor OS=Clostrid... 228 7e-57
M0WB51_HORVD (tr|M0WB51) Uncharacterized protein OS=Hordeum vulg... 227 9e-57
M0RSY5_MUSAM (tr|M0RSY5) Uncharacterized protein OS=Musa acumina... 227 1e-56
K9XV83_STAC7 (tr|K9XV83) RNA polymerase, sigma 70 subunit, RpoD ... 227 1e-56
L8L915_9CYAN (tr|L8L915) RNA polymerase sigma factor, cyanobacte... 226 1e-56
M0WB48_HORVD (tr|M0WB48) Uncharacterized protein OS=Hordeum vulg... 226 1e-56
R5KAK5_9CLOT (tr|R5KAK5) RNA polymerase sigma factor OS=Clostrid... 226 2e-56
B5W8F6_SPIMA (tr|B5W8F6) RNA polymerase sigma factor OS=Arthrosp... 226 2e-56
R5DIT0_9CLOT (tr|R5DIT0) RNA polymerase sigma factor OS=Clostrid... 226 2e-56
R7JBT1_9FUSO (tr|R7JBT1) RNA polymerase sigma factor OS=Fusobact... 226 2e-56
R5H6J4_9SPIR (tr|R5H6J4) RNA polymerase sigma factor OS=Brachysp... 226 3e-56
Q8S9C8_CYAPA (tr|Q8S9C8) RNA polymerase sigma factor OS=Cyanopho... 226 3e-56
R7HXZ6_9CLOT (tr|R7HXZ6) RNA polymerase sigma factor OS=Clostrid... 226 3e-56
K9Z5T0_CYAAP (tr|K9Z5T0) RNA polymerase sigma factor OS=Cyanobac... 225 3e-56
H1WB17_9CYAN (tr|H1WB17) RNA polymerase sigma factor OS=Arthrosp... 225 3e-56
D7E0T9_NOSA0 (tr|D7E0T9) RNA polymerase, sigma 70 subunit, RpoD ... 225 3e-56
K4CLH5_SOLLC (tr|K4CLH5) Uncharacterized protein OS=Solanum lyco... 225 4e-56
K9PG81_9CYAN (tr|K9PG81) RNA polymerase, sigma 70 subunit, RpoD ... 224 6e-56
Q84LK8_ORYSJ (tr|Q84LK8) Os08g0242800 protein OS=Oryza sativa su... 224 6e-56
I1QGT9_ORYGL (tr|I1QGT9) Uncharacterized protein OS=Oryza glaber... 224 6e-56
M1CE24_SOLTU (tr|M1CE24) Uncharacterized protein OS=Solanum tube... 224 6e-56
A3ITT4_9CHRO (tr|A3ITT4) RNA polymerase sigma factor SigD OS=Cya... 224 7e-56
M1CE25_SOLTU (tr|M1CE25) Uncharacterized protein OS=Solanum tube... 224 8e-56
K9X3C6_9NOST (tr|K9X3C6) RNA polymerase sigma factor, cyanobacte... 224 8e-56
K9QHM1_9NOSO (tr|K9QHM1) RNA polymerase, sigma 70 subunit, RpoD ... 224 9e-56
A9B4B0_HERA2 (tr|A9B4B0) RNA polymerase sigma factor OS=Herpetos... 224 9e-56
A4FAM7_SACEN (tr|A4FAM7) RNA polymerase sigma factor OS=Saccharo... 224 1e-55
G7CIB3_MYCTH (tr|G7CIB3) RNA polymerase sigma factor OS=Mycobact... 223 1e-55
K1VQH8_SPIPL (tr|K1VQH8) RNA polymerase sigma factor OS=Arthrosp... 223 1e-55
B9RRX0_RICCO (tr|B9RRX0) RNA polymerase sigma factor rpoD, putat... 223 2e-55
B1X0Q3_CYAA5 (tr|B1X0Q3) Group 2 sigma-70 RNA polymerase sigma f... 223 2e-55
G6GT77_9CHRO (tr|G6GT77) RNA polymerase, sigma 70 subunit, RpoD ... 223 2e-55
Q4C529_CROWT (tr|Q4C529) Sigma-70 region 3:Sigma-70 region 2:Sig... 223 2e-55
L8LWE0_9CYAN (tr|L8LWE0) RNA polymerase sigma factor, cyanobacte... 223 2e-55
Q10XF4_TRIEI (tr|Q10XF4) RNA polymerase, sigma 28 subunit OS=Tri... 223 2e-55
Q2JT33_SYNJA (tr|Q2JT33) RNA polymerase sigma factor OS=Synechoc... 223 2e-55
G5J3J9_CROWT (tr|G5J3J9) Cyanobacteria-specific RpoD-like sigma ... 222 3e-55
Q9KHE8_NOSS1 (tr|Q9KHE8) Group 2 sigma 70-type sigma factor D OS... 222 3e-55
K9YIA7_CYASC (tr|K9YIA7) RNA polymerase, sigma 70 subunit, RpoD ... 222 4e-55
Q3MBX2_ANAVT (tr|Q3MBX2) Sigma 28 (Flagella/Sporulation) OS=Anab... 222 4e-55
L8LVR4_9CHRO (tr|L8LVR4) RNA polymerase sigma factor, cyanobacte... 222 4e-55
Q9ZPL0_MAIZE (tr|Q9ZPL0) Sigma factor SIG6 OS=Zea mays GN=sig6 P... 222 4e-55
F9DNC2_9BACL (tr|F9DNC2) RNA polymerase sigma factor OS=Sporosar... 221 5e-55
K6DZP2_SPIPL (tr|K6DZP2) RNA polymerase sigma factor OS=Arthrosp... 221 5e-55
K7WX98_9NOST (tr|K7WX98) RpoD family RNA polymerase sigma subuni... 221 6e-55
B1MCY5_MYCA9 (tr|B1MCY5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
R4UWE6_MYCAB (tr|R4UWE6) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9JUV5_MYCAB (tr|I9JUV5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9FUR9_MYCAB (tr|I9FUR9) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9EKF3_MYCAB (tr|I9EKF3) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9D2K5_MYCAB (tr|I9D2K5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9C5K2_MYCAB (tr|I9C5K2) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9BTP9_MYCAB (tr|I9BTP9) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I9ACX8_MYCAB (tr|I9ACX8) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8X373_MYCAB (tr|I8X373) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8WZD6_MYCAB (tr|I8WZD6) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8WKL5_MYCAB (tr|I8WKL5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8W586_MYCAB (tr|I8W586) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8VNJ1_MYCAB (tr|I8VNJ1) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8TWE8_MYCAB (tr|I8TWE8) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8PUZ6_MYCAB (tr|I8PUZ6) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8PLN7_MYCAB (tr|I8PLN7) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8MCJ6_MYCAB (tr|I8MCJ6) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8LM26_MYCAB (tr|I8LM26) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8KSV1_MYCAB (tr|I8KSV1) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8K9X2_MYCAB (tr|I8K9X2) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8IEV1_MYCAB (tr|I8IEV1) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8IAL5_MYCAB (tr|I8IAL5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8HM38_MYCAB (tr|I8HM38) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8GJ68_MYCAB (tr|I8GJ68) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8G2P5_MYCAB (tr|I8G2P5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8FZZ7_MYCAB (tr|I8FZZ7) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8EX58_MYCAB (tr|I8EX58) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8ELW5_MYCAB (tr|I8ELW5) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8EC27_MYCAB (tr|I8EC27) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8DR15_MYCAB (tr|I8DR15) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8D964_MYCAB (tr|I8D964) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I8CL02_MYCAB (tr|I8CL02) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I6Z2Z4_MYCAB (tr|I6Z2Z4) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
I0PMQ8_MYCAB (tr|I0PMQ8) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
H0IRE0_MYCAB (tr|H0IRE0) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
H0ICR0_MYCAB (tr|H0ICR0) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
G6X4P0_MYCAB (tr|G6X4P0) RNA polymerase sigma factor OS=Mycobact... 221 6e-55
D5A2C0_SPIPL (tr|D5A2C0) RNA polymerase sigma factor OS=Arthrosp... 221 6e-55
K9U2G0_9CYAN (tr|K9U2G0) RNA polymerase, sigma 70 subunit, RpoD ... 221 6e-55
I9ILR8_MYCAB (tr|I9ILR8) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I9HLN7_MYCAB (tr|I9HLN7) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I8VHG9_MYCAB (tr|I8VHG9) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I8VDH6_MYCAB (tr|I8VDH6) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I8TI43_MYCAB (tr|I8TI43) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I8B7C4_MYCAB (tr|I8B7C4) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
I0PDF3_MYCAB (tr|I0PDF3) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
K0V9K1_MYCFO (tr|K0V9K1) RNA polymerase sigma factor OS=Mycobact... 221 7e-55
B2IZW2_NOSP7 (tr|B2IZW2) RNA polymerase sigma factor OS=Nostoc p... 221 7e-55
K2GB18_9BACI (tr|K2GB18) RNA polymerase sigma factor OS=Salimicr... 221 8e-55
Q59553_MYCSM (tr|Q59553) RNA polymerase sigma factor OS=Mycobact... 221 8e-55
I1NAA3_SOYBN (tr|I1NAA3) Uncharacterized protein OS=Glycine max ... 221 9e-55
K9EMY3_9CYAN (tr|K9EMY3) RNA polymerase sigma factor, cyanobacte... 221 9e-55
R7FDE2_9FIRM (tr|R7FDE2) RNA polymerase sigma factor OS=Ruminoco... 221 9e-55
Q8GB27_9NOST (tr|Q8GB27) RNA polymerase sigma factor (Fragment) ... 221 9e-55
Q2JIA4_SYNJB (tr|Q2JIA4) RNA polymerase sigma factor OS=Synechoc... 220 1e-54
I0S1E8_MYCXE (tr|I0S1E8) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
A0QVZ5_MYCS2 (tr|A0QVZ5) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
L8FGD2_MYCSM (tr|L8FGD2) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
N4WWQ2_9BACI (tr|N4WWQ2) RNA polymerase sigma factor RpoD OS=Gra... 220 1e-54
B8BC85_ORYSI (tr|B8BC85) Putative uncharacterized protein OS=Ory... 220 1e-54
Q8GB25_9CYAN (tr|Q8GB25) RNA polymerase sigma factor (Fragment) ... 220 1e-54
I1JPP1_SOYBN (tr|I1JPP1) Uncharacterized protein OS=Glycine max ... 220 1e-54
Q1B9Z9_MYCSS (tr|Q1B9Z9) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
A3PYH5_MYCSJ (tr|A3PYH5) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
A1UF13_MYCSK (tr|A1UF13) RNA polymerase sigma factor OS=Mycobact... 220 1e-54
A4TCQ2_MYCGI (tr|A4TCQ2) RNA polymerase sigma factor OS=Mycobact... 220 2e-54
L0IY83_MYCSM (tr|L0IY83) RNA polymerase sigma factor OS=Mycobact... 219 2e-54
A0ZFS4_NODSP (tr|A0ZFS4) RNA polymerase sigma factor OS=Nodulari... 219 2e-54
A4CX44_SYNPV (tr|A4CX44) RNA polymerase sigma factor OS=Synechoc... 219 2e-54
E6TES1_MYCSR (tr|E6TES1) RNA polymerase sigma factor OS=Mycobact... 219 2e-54
A3BR19_ORYSJ (tr|A3BR19) Putative uncharacterized protein OS=Ory... 219 2e-54
R8AAV8_STAEP (tr|R8AAV8) RNA polymerase sigma factor RpoD OS=Sta... 219 2e-54
R8A946_STAEP (tr|R8A946) RNA polymerase sigma factor RpoD OS=Sta... 219 2e-54
N6AKU9_STAEP (tr|N6AKU9) RNA polymerase sigma factor rpoD OS=Sta... 219 2e-54
K8PLV6_STAEP (tr|K8PLV6) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
K1VIM8_STAEP (tr|K1VIM8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1E4B5_STAEP (tr|J1E4B5) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1DNY8_STAEP (tr|J1DNY8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1CHA3_STAEP (tr|J1CHA3) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1CBP7_STAEP (tr|J1CBP7) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1BSQ3_STAEP (tr|J1BSQ3) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J1ARU2_STAEP (tr|J1ARU2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0ZGR6_STAEP (tr|J0ZGR6) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0XZL7_STAEP (tr|J0XZL7) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0SKE9_STAEP (tr|J0SKE9) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0PKL4_STAEP (tr|J0PKL4) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0PHM9_STAEP (tr|J0PHM9) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0NNS2_STAEP (tr|J0NNS2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0N472_STAEP (tr|J0N472) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0JDF8_STAEP (tr|J0JDF8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0J7R0_STAEP (tr|J0J7R0) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0J0C6_STAEP (tr|J0J0C6) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0ICM6_STAEP (tr|J0ICM6) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0I5P9_STAEP (tr|J0I5P9) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0HMW8_STAEP (tr|J0HMW8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0HH79_STAEP (tr|J0HH79) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0H6T9_STAEP (tr|J0H6T9) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0GGV0_STAEP (tr|J0GGV0) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0FBW2_STAEP (tr|J0FBW2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0ENZ7_STAEP (tr|J0ENZ7) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0EM95_STAEP (tr|J0EM95) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
J0EEG6_STAEP (tr|J0EEG6) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3Z7M3_STAEP (tr|H3Z7M3) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3WNW4_STAEP (tr|H3WNW4) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3WDB0_STAEP (tr|H3WDB0) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3W527_STAEP (tr|H3W527) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3VRB7_STAEP (tr|H3VRB7) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3VBX4_STAEP (tr|H3VBX4) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3V7Y9_STAEP (tr|H3V7Y9) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3V2C3_STAEP (tr|H3V2C3) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3UT92_STAEP (tr|H3UT92) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3UKR2_STAEP (tr|H3UKR2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3UHA2_STAEP (tr|H3UHA2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H0DMU8_STAEP (tr|H0DMU8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F9LR58_STAEP (tr|F9LR58) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F9LLJ8_STAEP (tr|F9LLJ8) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F9LBN4_STAEP (tr|F9LBN4) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F3TZF0_STAEP (tr|F3TZF0) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F3TP22_STAEP (tr|F3TP22) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
F3SZ37_STAEP (tr|F3SZ37) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
E6JMI2_STAEP (tr|E6JMI2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
D4FJ23_STAEP (tr|D4FJ23) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
D1WN70_STAEP (tr|D1WN70) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
C5Q9I5_STAEP (tr|C5Q9I5) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H3W217_STAEP (tr|H3W217) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
K9AV10_9STAP (tr|K9AV10) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
K0UK50_MYCVA (tr|K0UK50) RNA polymerase sigma factor OS=Mycobact... 219 2e-54
I0TQU2_STAEP (tr|I0TQU2) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H1JUC1_9MYCO (tr|H1JUC1) RNA polymerase sigma factor OS=Mycobact... 219 2e-54
K5BFQ9_9MYCO (tr|K5BFQ9) RNA polymerase sigma factor OS=Mycobact... 219 2e-54
K9ZHT8_ANACC (tr|K9ZHT8) RNA polymerase sigma factor OS=Anabaena... 219 2e-54
Q4L6R1_STAHJ (tr|Q4L6R1) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
K9U8Z9_9CYAN (tr|K9U8Z9) RNA polymerase sigma factor OS=Chroococ... 219 2e-54
Q5N3S3_SYNP6 (tr|Q5N3S3) Group2 RNA polymerase sigma factor RpoD... 219 2e-54
H3VML5_STAHO (tr|H3VML5) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
E5CMA5_STAHO (tr|E5CMA5) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
C2M0X4_STAHO (tr|C2M0X4) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
I0TJ54_STAEP (tr|I0TJ54) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
H0DZC7_STAEP (tr|H0DZC7) RNA polymerase sigma factor OS=Staphylo... 219 2e-54
R8AEN3_STAEP (tr|R8AEN3) RNA polymerase sigma factor RpoD (Fragm... 219 2e-54
A4IR10_GEOTN (tr|A4IR10) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
D4TFM7_9NOST (tr|D4TFM7) SigD (Sigma 28 (Flagella/spoulation)) O... 219 3e-54
B4BLS6_9BACI (tr|B4BLS6) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
B2J979_NOSP7 (tr|B2J979) RNA polymerase, sigma 70 subunit, RpoD ... 219 3e-54
H0QYN2_9ACTO (tr|H0QYN2) RNA polymerase sigma factor OS=Gordonia... 219 3e-54
F7NKY8_9FIRM (tr|F7NKY8) RNA polymerase sigma factor OS=Acetonem... 219 3e-54
D7STK4_VITVI (tr|D7STK4) Putative uncharacterized protein OS=Vit... 219 3e-54
C9R939_AMMDK (tr|C9R939) RNA polymerase sigma factor OS=Ammonife... 219 3e-54
N5AEY7_STAAU (tr|N5AEY7) RNA polymerase sigma factor rpoD OS=Sta... 219 3e-54
N4ZKH9_STAAU (tr|N4ZKH9) RNA polymerase sigma factor rpoD OS=Sta... 219 3e-54
F0P4M7_STAPE (tr|F0P4M7) RNA polymerase sigma factor OS=Staphylo... 219 3e-54
E8SIB4_STAPH (tr|E8SIB4) RNA polymerase sigma factor OS=Staphylo... 219 3e-54
G7VQ86_PAETH (tr|G7VQ86) RNA polymerase sigma factor OS=Paenibac... 219 3e-54
F8CTW9_GEOTC (tr|F8CTW9) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
E3IH36_GEOS0 (tr|E3IH36) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
I0UBZ9_BACTR (tr|I0UBZ9) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
E3E8J9_PAEPS (tr|E3E8J9) RNA polymerase sigma factor OS=Paenibac... 219 3e-54
E0RHD3_PAEP6 (tr|E0RHD3) RNA polymerase sigma factor OS=Paenibac... 219 3e-54
I7KAZ1_PAEPO (tr|I7KAZ1) RNA polymerase sigma factor OS=Paenibac... 219 3e-54
H6CKK4_9BACL (tr|H6CKK4) RNA polymerase sigma factor OS=Paenibac... 219 3e-54
C7ZXE7_STAAU (tr|C7ZXE7) RNA polymerase sigma factor OS=Staphylo... 219 3e-54
G7ZNV1_STAAU (tr|G7ZNV1) RNA polymerase sigma factor OS=Staphylo... 219 3e-54
A5BHR4_VITVI (tr|A5BHR4) Putative uncharacterized protein OS=Vit... 219 3e-54
C5D4R8_GEOSW (tr|C5D4R8) RNA polymerase sigma factor OS=Geobacil... 219 3e-54
G5JLU6_9STAP (tr|G5JLU6) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
K4ZKA9_PAEAL (tr|K4ZKA9) RNA polymerase sigma factor OS=Paenibac... 218 4e-54
Q7NEW6_GLOVI (tr|Q7NEW6) RNA polymerase sigma factor OS=Gloeobac... 218 4e-54
Q2YT18_STAAB (tr|Q2YT18) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
Q2FGG2_STAA3 (tr|Q2FGG2) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
E5R6B6_STAAG (tr|E5R6B6) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
E5QUY3_STAAH (tr|E5QUY3) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D9RK12_STAAK (tr|D9RK12) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D9RHK8_STAAJ (tr|D9RHK8) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D8HBN1_STAAF (tr|D8HBN1) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D3EWV7_STAA4 (tr|D3EWV7) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D2N7Q2_STAA5 (tr|D2N7Q2) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D1GM90_STAA0 (tr|D1GM90) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
D0K5E2_STAAD (tr|D0K5E2) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
A8Z4A1_STAAT (tr|A8Z4A1) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
A7X2V7_STAA1 (tr|A7X2V7) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
A6U233_STAA2 (tr|A6U233) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
A6QHA4_STAAE (tr|A6QHA4) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
A5IT89_STAA9 (tr|A5IT89) RNA polymerase sigma factor OS=Staphylo... 218 4e-54
R9GHC0_STAAU (tr|R9GHC0) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
R9E3V4_STAAU (tr|R9E3V4) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
R9DQ25_STAAU (tr|R9DQ25) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
R9D9M0_STAAU (tr|R9D9M0) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
R9D3F4_STAAU (tr|R9D3F4) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
R9D0R7_STAAU (tr|R9D0R7) RNA polymerase sigma factor RpoD OS=Sta... 218 4e-54
N6TGZ9_STAAU (tr|N6TGZ9) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6TFH3_STAAU (tr|N6TFH3) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6S7A1_STAAU (tr|N6S7A1) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6S724_STAAU (tr|N6S724) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RWK7_STAAU (tr|N6RWK7) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RTV8_STAAU (tr|N6RTV8) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RPT4_STAAU (tr|N6RPT4) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RN77_STAAU (tr|N6RN77) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RCK5_STAAU (tr|N6RCK5) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6RAI3_STAAU (tr|N6RAI3) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6R806_STAAU (tr|N6R806) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6QP87_STAAU (tr|N6QP87) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6QFL7_STAAU (tr|N6QFL7) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6Q601_STAAU (tr|N6Q601) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6Q400_STAAU (tr|N6Q400) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6Q2P5_STAAU (tr|N6Q2P5) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6PM78_STAAU (tr|N6PM78) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6PJ40_STAAU (tr|N6PJ40) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6PHD0_STAAU (tr|N6PHD0) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6P882_STAAU (tr|N6P882) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6NPC7_STAAU (tr|N6NPC7) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6NIK8_STAAU (tr|N6NIK8) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6NET8_STAAU (tr|N6NET8) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6NBH3_STAAU (tr|N6NBH3) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
N6N7H0_STAAU (tr|N6N7H0) RNA polymerase sigma factor rpoD OS=Sta... 218 4e-54
>K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 564
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/572 (68%), Positives = 420/572 (73%), Gaps = 17/572 (2%)
Query: 1 MSCLLPHFKCXXXXXXXXXXXXXXXLFITKTRPNLCFQPQCVLLATTSVSKSSAALLNLP 60
MSCLLPHF C L +KTRPNLCFQPQCVL AT S + LL+L
Sbjct: 1 MSCLLPHFNCHLDTFRTHPYALPTHL--SKTRPNLCFQPQCVLSAT-----SPSTLLSLE 53
Query: 61 TELELDAP---NTPWPY-----PSTQANFKATSSAESLXXXXXXXXXXXXXXXXXXXXXX 112
+L LDAP NT WPY P QANFK+T SAESL
Sbjct: 54 KKLALDAPSDPNTSWPYIAAVSPPLQANFKSTLSAESLLTNEEAVIVAAASEALALAKAA 113
Query: 113 XXXXXXXXXXXXXRPPAEAGYRPQVPSKSDNLLLNWIQHME-AEDVVAGGSMGAGAEVME 171
+PPAEA Y+ V SKSD+LLL W + ME ED VA SMGAGAE+ME
Sbjct: 114 AKVAKDAALLVKKKPPAEAEYKSHVSSKSDDLLLKWFKQMEEVEDGVAEESMGAGAEIME 173
Query: 172 AVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIVSF 231
VD+SPSEEE D S+SI RS RQTERKAKRVRATEKATTN SF
Sbjct: 174 GVDVSPSEEE-SDLEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVRATEKATTNFTSF 232
Query: 232 KSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDL 291
K GS+SR+KRV +QEVDYSDP EEI+LS GIQDL+KLEK+QEDL
Sbjct: 233 KPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLLKLEKIQEDL 292
Query: 292 AEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNL 351
AE+ G QPTFAQWAAVAGVDQKTLRKRLNYGIFCK+KMIKSNIRLVISIAKNYQG+GMNL
Sbjct: 293 AERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAKNYQGSGMNL 352
Query: 352 QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 411
QDLVQEGCRGLV+GAEKFD +KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY
Sbjct: 353 QDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 412
Query: 412 RVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSE 471
RVKEARKQLYSENGR PDDEEVAEATGLSMKRL+AVL+TPKAPRSLEQKIGINQNLKPSE
Sbjct: 413 RVKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIGINQNLKPSE 472
Query: 472 VIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLG 531
VI+DP+AETAEEQL+KQFMKKDLE+ LDSLNPRE+QV+RWRFGMDDGR KTLQEIGEMLG
Sbjct: 473 VISDPDAETAEEQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKTLQEIGEMLG 532
Query: 532 VSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
VSRERIRQIES AF YLVS
Sbjct: 533 VSRERIRQIESSAFKKLKNKKRTNHLQQYLVS 564
>G7J988_MEDTR (tr|G7J988) RNA polymerase sigma factor rpoD OS=Medicago truncatula
GN=MTR_3g118290 PE=4 SV=1
Length = 572
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/436 (74%), Positives = 354/436 (81%), Gaps = 7/436 (1%)
Query: 135 PQVPSKSDNLLLNWIQHMEAEDV----VAGGSMGAGAEVMEAVDISPSEEEF---DDAXX 187
PQ+PS +NLLL W+QHMEA + V+ + AG ++ME + ISP++E+ DD
Sbjct: 137 PQLPSTPENLLLKWVQHMEAAEYAAAAVSIATGPAGPDIMEHLHISPNQEDDFNDDDEPT 196
Query: 188 XXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEV 247
SI ARS RQTERKA+RVRA+ KA TNIVSF+SGST+RKKRV QEV
Sbjct: 197 SEELEDVEEQLYDTSIDARSGRQTERKARRVRASGKAATNIVSFRSGSTTRKKRVRTQEV 256
Query: 248 DYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAV 307
DYSDP EEI+ SEGIQDLIKLEKLQEDLAEKCG QPTFAQWA +
Sbjct: 257 DYSDPLRYLRTTTRTTRLLTTSEEIKFSEGIQDLIKLEKLQEDLAEKCGGQPTFAQWATM 316
Query: 308 AGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 367
AGVDQKTLRKRLNYG+FCKEKMIKSNIRLVIS+AKNYQG+GM+LQDLVQEGCRGLVRGAE
Sbjct: 317 AGVDQKTLRKRLNYGVFCKEKMIKSNIRLVISVAKNYQGSGMSLQDLVQEGCRGLVRGAE 376
Query: 368 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 427
K+DASKGFKFSTYAHWWIKQAVRKSLS QSRTIRLPFHMV ATY+VKEARKQLYSENGR
Sbjct: 377 KYDASKGFKFSTYAHWWIKQAVRKSLSVQSRTIRLPFHMVGATYKVKEARKQLYSENGRQ 436
Query: 428 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIK 487
PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQK+GINQ+LK SEV+ADPEAETAEEQLIK
Sbjct: 437 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKVGINQSLKLSEVLADPEAETAEEQLIK 496
Query: 488 QFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXX 547
QFMKKDLEKVLDSLNPREKQVI+WRFGMDDGRMKTLQEIGEM+GVSRERIRQIESCAF
Sbjct: 497 QFMKKDLEKVLDSLNPREKQVIKWRFGMDDGRMKTLQEIGEMMGVSRERIRQIESCAFRK 556
Query: 548 XXXXXXXXXXXXYLVS 563
Y VS
Sbjct: 557 LKNKKRAKHLQQYFVS 572
>D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_15s0024g00640 PE=4 SV=1
Length = 575
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 342/581 (58%), Positives = 395/581 (67%), Gaps = 24/581 (4%)
Query: 1 MSCLLPHFKCXXXXXXXXXXXXXXXLFITKTRPNLCFQPQCVLLATTS--VSKSSAALLN 58
MSCLLP FKC ++K R + F+ QC L +TTS +S S+ A+L+
Sbjct: 1 MSCLLPQFKCPPDTFSTHPKLH----ILSKNREAIYFRVQCAL-STTSPPLSTSTTAVLD 55
Query: 59 -----LPTELELD----APNTPWPY-----PSTQANFKATSSAESLXXXXXXXXXXXXXX 104
LP+ LE A + PW Y P T+ANF+AT + E+L
Sbjct: 56 IEKLRLPS-LESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAE 114
Query: 105 XXXXXXXXXXXXXXXXXXXXXRPPAEAGYRP-QVPSKSDNLLLNWIQHMEAEDV-VAGGS 162
A++ +P S D IQ E E + + G S
Sbjct: 115 AVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDS 174
Query: 163 MGAGAEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATE 222
+GA +++ + E+ DD S SI RS+RQ ERKA+R RA E
Sbjct: 175 VGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAE 234
Query: 223 KATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLI 282
KA+ +VS +SGSTSR+KRV +QEVDYSDP EE+ELSEGIQDL+
Sbjct: 235 KASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLL 294
Query: 283 KLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAK 342
KLEKLQEDL E+ G +PTFAQWAA AGVDQKTLR+R NYGI CK+KMIKSNIRLVISIAK
Sbjct: 295 KLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAK 354
Query: 343 NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 402
NYQGAGMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 355 NYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 414
Query: 403 PFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIG 462
PFHMVEATYRVKEARKQLYSENGRHP++EEVAEATGLSMKRL+AVLLTPKAPRSL+QKIG
Sbjct: 415 PFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIG 474
Query: 463 INQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKT 522
INQNLKPSEVIADP+AETAEE LIKQFM++DLEKVL+SLNPREKQVIRWR+G++DGR KT
Sbjct: 475 INQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKT 534
Query: 523 LQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
LQEIGE++GVSRERIRQIESCAF YLVS
Sbjct: 535 LQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575
>B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, putative OS=Ricinus
communis GN=RCOM_1515490 PE=4 SV=1
Length = 569
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 328/574 (57%), Positives = 376/574 (65%), Gaps = 17/574 (2%)
Query: 1 MSCLLPHFKCXXXXXXXXXXXXXXXLF----ITKTRPNLCFQPQCVLLATTSVSKSSA-- 54
MSCLLP FKC TK+R + ++ QC+L T+ + ++
Sbjct: 2 MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVLD 61
Query: 55 -ALLNLPT-ELELD--APNTPWPYPSTQANFKATSSAESLXXXXXXXXXXXXXXXXXXXX 110
L LP+ E D APN+PW Y A F +T + E+L
Sbjct: 62 LEKLRLPSFEAPSDSIAPNSPWTY----ATFGSTLATETLITSDEAVIAAAAAEAVALAR 117
Query: 111 XXXXXXXXXXXXXXXRPPAEAGYRPQVPSKSDNLLLNWIQHMEAEDV-VAGGSMGAGAEV 169
P AE + PS D W Q E E + G S+
Sbjct: 118 AAVKVAKDAALLVKNFPSAETESKLTSPSTIDAS--RWPQFTETERARIIGDSVATETGP 175
Query: 170 MEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIV 229
E + S +E D S I RS RQTERKA+R RA EKA +++V
Sbjct: 176 REESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVV 235
Query: 230 SFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQE 289
S K GSTS+KKR +QEVDYSDP EE+ELS IQDL+KLE+LQE
Sbjct: 236 SVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQE 295
Query: 290 DLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGM 349
+LAE+ G QPTFAQWAA AGVDQ+TLRKR+N+G CK+KMIKSNIRLVISIAKNYQGAGM
Sbjct: 296 ELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGM 355
Query: 350 NLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA 409
NLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA
Sbjct: 356 NLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA 415
Query: 410 TYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKP 469
TYRVKEARKQLYSENGRHPDDEEVAEA GLSMKRLSAVLLTPKAPRSL+QKIG+N +LKP
Sbjct: 416 TYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKP 475
Query: 470 SEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEM 529
SEVIADPEAETAEE L+KQFMK+DLEKVL++LNPRE QV+RWRFG++DGRMKTLQEIGE+
Sbjct: 476 SEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEI 535
Query: 530 LGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
+GVSRERIRQIES AF YL++
Sbjct: 536 MGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569
>M5VUM6_PRUPE (tr|M5VUM6) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa006657mg PE=4 SV=1
Length = 401
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/401 (72%), Positives = 327/401 (81%)
Query: 163 MGAGAEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATE 222
MG+ ++E I + +E +D S ITARSSRQ ERKA+R +A E
Sbjct: 1 MGSETALVENHFIQVAIKESEDVESTNQEFELLREQLSEGITARSSRQIERKARRAKAAE 60
Query: 223 KATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLI 282
KA ++VS KSGSTSRKKR +Q+VD+SDP EEIELSEGIQ+L+
Sbjct: 61 KAAASVVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELL 120
Query: 283 KLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAK 342
KLEKLQE+L ++CG QPT AQWAA AGVDQKTLRKR+NYGI CK+KMIKSNIRLVISIAK
Sbjct: 121 KLEKLQEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAK 180
Query: 343 NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 402
NYQGAGMNLQDLVQ+GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 181 NYQGAGMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 240
Query: 403 PFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIG 462
PFHMVEATYRV+EA+KQLYS NGRHP+DEEVAEATGLSMKRL+AVLLTPKAPRSLEQKIG
Sbjct: 241 PFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIG 300
Query: 463 INQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKT 522
INQNLKPSEVIADPEAETAE+ L+K+FMK+DLEKVLDSLN REKQV+RWRFG++DGRMKT
Sbjct: 301 INQNLKPSEVIADPEAETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKT 360
Query: 523 LQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
LQEIGE++GVSRERIRQIESCAF Y+VS
Sbjct: 361 LQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 401
>K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g081490.2 PE=4 SV=1
Length = 613
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/372 (74%), Positives = 311/372 (83%), Gaps = 10/372 (2%)
Query: 174 DISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIVSFKS 233
D+ PS EE + SN I +S+RQTERKA+R +A E+A N+VS KS
Sbjct: 234 DLEPSHEELE----------ILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKS 283
Query: 234 GSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAE 293
GSTSRKKR VQ+VDYSDP EE ELS GIQDL+KLE+LQ +L E
Sbjct: 284 GSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTE 343
Query: 294 KCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQD 353
+CG QPTF QWAA AGVDQ TLRKRLNYGI CK+KMIKSN+RLVISIAKNYQG GMNLQD
Sbjct: 344 RCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQD 403
Query: 354 LVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 413
LVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV
Sbjct: 404 LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 463
Query: 414 KEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVI 473
KEARKQL +ENGRHP+D EVAEATGLSMKRL+AV+LTPKAPRSL+QK+G N++LKPSEV+
Sbjct: 464 KEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVL 523
Query: 474 ADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVS 533
ADP+AET+EE L KQFM++DLEKVLD+LNPREKQV+RWRFG++DGRMKTLQEIGE++GVS
Sbjct: 524 ADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVS 583
Query: 534 RERIRQIESCAF 545
RERIRQIESCAF
Sbjct: 584 RERIRQIESCAF 595
>M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400031111 PE=4 SV=1
Length = 613
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/372 (74%), Positives = 309/372 (83%), Gaps = 10/372 (2%)
Query: 174 DISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIVSFKS 233
D+ PS EE + SN I +S+RQTERKAKR ++ EKA N+V+ KS
Sbjct: 234 DLEPSPEELE----------ILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKS 283
Query: 234 GSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAE 293
GSTSRKKR VQ+VDYSDP EE ELS GIQDL+KLE+LQ +L E
Sbjct: 284 GSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTE 343
Query: 294 KCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQD 353
+CG QPTF QWAA AGVDQ TLRKRLNYGI CK+KMIKSN+RLVISIAKNYQG GMNLQD
Sbjct: 344 RCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQD 403
Query: 354 LVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 413
LVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRV
Sbjct: 404 LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRV 463
Query: 414 KEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVI 473
KEARKQL +ENGRHP+D EVAEA GLSMKRL+AV+LTPKAPRSL+QKIG N++LKPSEV+
Sbjct: 464 KEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVL 523
Query: 474 ADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVS 533
ADPEAET+EE L KQFM++DLEKVLD+LNPREKQV+RWRFG++DGRMKTLQEIGE++GVS
Sbjct: 524 ADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVS 583
Query: 534 RERIRQIESCAF 545
RERIRQIESCAF
Sbjct: 584 RERIRQIESCAF 595
>R0IC61_9BRAS (tr|R0IC61) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008711mg PE=4 SV=1
Length = 571
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/364 (73%), Positives = 305/364 (83%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
S+ RS+RQTERKA+R + EK+ + I S K+GS+ RKKRV QEVD++DP
Sbjct: 208 SLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTS 267
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE ELS GIQDL+KLE+LQ +L E+CG QPTF+QWA+ AGVDQK+LRKR+NY
Sbjct: 268 SSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINY 327
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G CK+KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYA
Sbjct: 328 GTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 387
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLY+E GRHP++EEVAEATGLSM
Sbjct: 388 HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSM 447
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
KRL AVLL+PK PRSL+QKIG+NQNLKPSEVIADPEAET+E+ LIKQFM++DL+KVLDSL
Sbjct: 448 KRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSL 507
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
REKQVIRWRFGM+DGRMKTLQEIGE++GVSRER+RQIES AF YL
Sbjct: 508 GTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYL 567
Query: 562 VSQS 565
V+QS
Sbjct: 568 VAQS 571
>B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_834586 PE=4 SV=1
Length = 567
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/577 (55%), Positives = 371/577 (64%), Gaps = 24/577 (4%)
Query: 1 MSCLLPHFKCXXXXXXXXXXXXXXXLFITKTRPNLCFQPQCVLLATTSVSKSSAAL---- 56
MSCLLP FKC + N PQCVL +S S S+A L
Sbjct: 1 MSCLLPQFKCQPDTFSVHFRN------LQHHGTNHTQLPQCVL---SSASPSTAVLDLEK 51
Query: 57 LNLPT-ELELDA--PNTPWPY-----PSTQANFKATSSAESLXXXXXXXXXXXXXXXXXX 108
L LP+ E D+ N PW Y P + F + +AE+L
Sbjct: 52 LRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVAL 111
Query: 109 XXXXXXXXXXXXXXXXXRPPAEAGYRPQVPSKSDNLLLNW--IQHMEAEDVVAGGSMGAG 166
+ + + S +D+ W + E D++ G S+ A
Sbjct: 112 ARAAVKVAKDAAEMAKNYSSMKKETKIPIASTTDSFSSMWSLLTEKERADII-GDSVSAE 170
Query: 167 AEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATT 226
+ E + EE+D S I RS RQTERKA+R RA EKA
Sbjct: 171 TRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAA 230
Query: 227 NIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEK 286
N+VS KSGSTS+KKRVP+QEVD SDP EE+ELSEGIQDL+KLE+
Sbjct: 231 NVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLER 290
Query: 287 LQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQG 346
++E+L E+ G +P+FAQWAA AGVDQ TLRKRLNYGI CK+KMIKSN+RLVISIAKNYQG
Sbjct: 291 IEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQG 350
Query: 347 AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 406
GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHM
Sbjct: 351 TGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHM 410
Query: 407 VEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQN 466
V+ATYRVKEARKQLYSENGRHPDD+EVAEA GLSMKRLSAVLLTPKAPRSL+QK+G N +
Sbjct: 411 VDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMD 470
Query: 467 LKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEI 526
LK SEV ADPEAETAE+ L+K+FMKKDL KVL SL+PRE QV+RWRFGM+DGRMKTLQEI
Sbjct: 471 LKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEI 530
Query: 527 GEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
GE++GVSRER+RQIE AF Y+V+
Sbjct: 531 GELMGVSRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567
>D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_470915 PE=4 SV=1
Length = 572
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/366 (72%), Positives = 302/366 (82%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXX 259
S S+ RS+RQTERKA+R + EK + I S K+GS RKKR+ QEVD++DP
Sbjct: 207 SVSLAVRSTRQTERKARRAKGLEKTASGIPSVKTGSNPRKKRLVAQEVDHNDPLRYLRMT 266
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE ELS GIQDL+KLE+LQ +L E+CG QPTFAQWA+ AGVDQK+LRKR+
Sbjct: 267 TSSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGVDQKSLRKRI 326
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
++G CK+KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFST
Sbjct: 327 HHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFST 386
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
YAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EE+AEATGL
Sbjct: 387 YAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGL 446
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
SMKRL AVLL+PK PRSL+QKIG+NQNLKPSEVIADPEA T+E+ LIK+FM++DL+KVLD
Sbjct: 447 SMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLD 506
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXX 559
SL REKQVIRWRFGM+DGRMKTLQEIGEM+GVSRER+RQIES AF
Sbjct: 507 SLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRSNHLQQ 566
Query: 560 YLVSQS 565
YLV+QS
Sbjct: 567 YLVAQS 572
>B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_780378 PE=4 SV=1
Length = 564
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/576 (54%), Positives = 360/576 (62%), Gaps = 25/576 (4%)
Query: 1 MSCLLPHFKCXXXXXXXXXXXXXXXLFITKTRPNLCFQPQCVLLATTSVSKSSAALL--- 57
MSCLLP FKC I CF+ QC L + + + ++ L
Sbjct: 1 MSCLLPQFKCQPDS-----------FSIHSNGEPFCFRAQCALSSASPSTSTAVLNLEKL 49
Query: 58 ---NLPTELELDAPNTPWPY-----PSTQANFKATSSAESLXXXXXXXXXXXXXXXXXXX 109
+L + + A N PW Y P + F + + E+L
Sbjct: 50 RLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAVIAAAAAEAVALA 109
Query: 110 XXXXXXXXXXXXXXXXRPPAEAGYRPQVPSKSDNLLLNW--IQHMEAEDVVAGGSMGAGA 167
+ + S +D+ W + E D++ G S A
Sbjct: 110 RAAVKVAKDAAEMAKNYCSVNTETKIPIASTADSFSSMWSLLTGKERADII-GVSFSAET 168
Query: 168 EVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTN 227
+ E EE D S SI RS RQT+RKAKR RA EKA N
Sbjct: 169 GLREECSTQYPTEESDCFGPTHEELALLEKQLSESIVVRSKRQTQRKAKRARAAEKAAAN 228
Query: 228 IVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKL 287
V KSGS +KKRVPVQEVD SDP EE+ELSEGIQDL+KLE++
Sbjct: 229 FVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSATEEVELSEGIQDLLKLERI 288
Query: 288 QEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGA 347
+E+L E+ G +PTFAQWAA A VDQ TLRKRLNY I CK+KMIKSNIRLVISIAKNYQGA
Sbjct: 289 EEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGA 348
Query: 348 GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 407
GMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWI+QAVR+SLSDQSRTIRLPFHMV
Sbjct: 349 GMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIRQAVRRSLSDQSRTIRLPFHMV 408
Query: 408 EATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNL 467
+ATYRVKEARKQ YSENGRHPDD+EVAEATGLSMKRLSAVLLTPKAPRSL+QK+G N +L
Sbjct: 409 DATYRVKEARKQFYSENGRHPDDKEVAEATGLSMKRLSAVLLTPKAPRSLDQKMGFNMDL 468
Query: 468 KPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIG 527
K SEV ADPEAETAE+ L+K+FMKKDLE+VL+SL+PRE QVIRWRFGM+DGRMKTLQEIG
Sbjct: 469 KLSEVTADPEAETAEDLLMKEFMKKDLERVLESLSPRENQVIRWRFGMEDGRMKTLQEIG 528
Query: 528 EMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
E++GVSRERIRQIE AF YLVS
Sbjct: 529 ELMGVSRERIRQIELSAFRKLKNKNRTKQLRQYLVS 564
>Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis alba GN=sig2 PE=2
SV=1
Length = 575
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/413 (64%), Positives = 319/413 (77%), Gaps = 16/413 (3%)
Query: 154 AEDVVAGGSMGAGAEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTER 213
++ + A GS+ E + D++P+E++ S S RS+RQTER
Sbjct: 175 SDRITAPGSLECNKEASD--DLTPAEKQ-------------EVEKLSVSSAVRSTRQTER 219
Query: 214 KAKRVRATEKATTNI-VSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEI 272
KA+RV+ EK + + S K+GS+SRKKRV QE+D++DP EE
Sbjct: 220 KARRVKGLEKTASGMQSSVKTGSSSRKKRVASQEIDHNDPLRYLRMTTSSSKLLTAREEQ 279
Query: 273 ELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKS 332
+LSEGIQDL+KLE+LQ +L E+CG QPTF+QWA+ AGVD+KTLRKR+ +G CK++MIKS
Sbjct: 280 QLSEGIQDLLKLERLQAELTERCGHQPTFSQWASAAGVDKKTLRKRITHGTQCKDRMIKS 339
Query: 333 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 392
NIRLVISIAKNYQGAGM+ QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 340 NIRLVISIAKNYQGAGMDFQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 399
Query: 393 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPK 452
LSDQSR IRLPFHMVEATYRVKEARKQLYSE G+ P +EEVAEATGLSMKRL AVLL+PK
Sbjct: 400 LSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPKNEEVAEATGLSMKRLMAVLLSPK 459
Query: 453 APRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWR 512
PRSL+QKIGIN NLKPSEVIADPEAET+E+ L+KQFM++DL+KVLDSL+ REKQVIRWR
Sbjct: 460 PPRSLDQKIGINLNLKPSEVIADPEAETSEDILMKQFMRQDLDKVLDSLSTREKQVIRWR 519
Query: 513 FGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVSQS 565
FGM+DGRMKTLQEIGE +GVSRER+RQI++ AF YLV+Q+
Sbjct: 520 FGMEDGRMKTLQEIGETMGVSRERVRQIDTSAFRKLKNKKRNSHLQQYLVAQT 572
>M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra018617 PE=4 SV=1
Length = 573
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 299/582 (51%), Positives = 363/582 (62%), Gaps = 32/582 (5%)
Query: 2 SCLLPHFKCXXXXXXXXXXXXXXXLFITKTRPNLCFQPQC-------VLLATTSVSKSSA 54
SCLLP+FKC + ++ FQPQC +L +T VSK
Sbjct: 3 SCLLPNFKCQPDSFSIHFRTSYS--LSKHNKSSVYFQPQCAVSTSPPLLTSTLDVSK--- 57
Query: 55 ALLNLPTELELDAPNTPWPY-----PSTQANFKATSSAESLXXXXXXXXXXXXXXXXXXX 109
L LP+ + D+ + PW Y PST+A + ++E+L
Sbjct: 58 --LRLPS-FDTDS-DRPWTYTGAVGPSTEAKYLEALASETLLTSDEAVVAAAAAEALALA 113
Query: 110 XXXXXXXXXXXXXXXXRPPAEAGYRPQVPSKSDNLLLNWIQHMEAEDV-----VAGGSMG 164
+P V S + + W Q E E +A G
Sbjct: 114 RAALKVAKDATLFSNTH-----NAKPSVTSSAPDKRSKWDQFTEKERAGILGHLAVSDTG 168
Query: 165 AGAEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKA 224
++ + A +E + + S RS+RQTERKA+R + EK
Sbjct: 169 VVSDRVTAPAPPECNKESAEKQEAEPLEEEEEEIVAVSSAVRSTRQTERKARRAKGLEKT 228
Query: 225 TTNIVS-FKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIK 283
+ + S K+ S+SRKKRV QE+D +DP EE +LSEGIQDL+K
Sbjct: 229 ASGMQSAVKTVSSSRKKRVASQEIDNNDPLRYLRMTTSSSKLLTAREEQQLSEGIQDLLK 288
Query: 284 LEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKN 343
LE+LQ +L E+CG QPT AQWA+ AG+D+KTLRKR+ +G CK++MIKSNIRLVISIAKN
Sbjct: 289 LERLQAELTERCGHQPTLAQWASAAGIDKKTLRKRITHGTQCKDRMIKSNIRLVISIAKN 348
Query: 344 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 403
YQGAGM+ QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLP
Sbjct: 349 YQGAGMDFQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLP 408
Query: 404 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGI 463
FHMVEATYRVKEARKQLYSE G+ P +EEVAEATGLSMKRL AVLL+PK PRSL+QKIGI
Sbjct: 409 FHMVEATYRVKEARKQLYSETGKQPKNEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGI 468
Query: 464 NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTL 523
N NLKPSEVI+DPEAET+E+ L+KQFM++DL+KVLDSL REKQVIRWRFGM+DGRMKTL
Sbjct: 469 NLNLKPSEVISDPEAETSEDILMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTL 528
Query: 524 QEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVSQS 565
QEIGE +GVSRER+RQIES AF YLV+Q+
Sbjct: 529 QEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQT 570
>M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/371 (71%), Positives = 305/371 (82%), Gaps = 9/371 (2%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
+I RS RQTER+A+R RA EKA +++ KSGS+ +KKR +QE+DYSDP
Sbjct: 178 NIAVRSGRQTERRARRARAAEKAAAGVLNLKSGSSGKKKRSTLQEIDYSDPLHYLRGTTS 237
Query: 262 XXXXXXXXEEIELSEGIQ---------DLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQ 312
EE+ELSEGIQ DL+KLE+LQ+DL E+ G QPTFAQWAA AG+DQ
Sbjct: 238 TSRLLTAAEEVELSEGIQTYSKILFNGDLLKLERLQQDLTERNGCQPTFAQWAAAAGIDQ 297
Query: 313 KTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 372
K LRKRLNYG FCK+KMI SNIRLVISIAKNYQ AGMNLQDLVQEGCRGL++GAEKFDAS
Sbjct: 298 KVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQDLVQEGCRGLIKGAEKFDAS 357
Query: 373 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEE 432
KGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRV+EA+KQLYSENGRHPD EE
Sbjct: 358 KGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDHEE 417
Query: 433 VAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKK 492
VAEA+GLSMKR +AV+LTPKAPRSL+QKIGINQ LKPSEVIADP+AET+E+ LIKQFM++
Sbjct: 418 VAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKPSEVIADPDAETSEDILIKQFMRE 477
Query: 493 DLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXX 552
DL KVLD+LNPREK+V+RWRFG++DGRMKTLQEIGE++GVSRERIRQIE CAF
Sbjct: 478 DLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIEFCAFRKLKSKK 537
Query: 553 XXXXXXXYLVS 563
Y++S
Sbjct: 538 RTKNLQQYIIS 548
>Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2
Length = 575
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/344 (77%), Positives = 297/344 (86%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
SIT RS+RQ ERKA+R RA EK +N+VS K GS SRKKR VQEVDYSDP
Sbjct: 214 SITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATN 273
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE ELS GIQDL+KLEKL ++L + G P+F QWAA AG+DQ+TLR+RLN+
Sbjct: 274 SSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNH 333
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G FCK+KMIKSN+RLVISIAKNYQG+GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA
Sbjct: 334 GTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 393
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG+ P++EEVAEATGLSM
Sbjct: 394 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSM 453
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
KRL+AVL+TPKAPRSL+QKIG N NLKPSEVIADPEAETAE+ L KQFM++DLEKVLD+L
Sbjct: 454 KRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTL 513
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+ REKQVIRWRFG++DGRMKTLQEIGE++GVSRERIRQIES AF
Sbjct: 514 SSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 557
>M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/364 (71%), Positives = 298/364 (81%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXX 259
S I RS RQTER+AKR RA +K + +++ K G++ +KKR QEVDYSDP
Sbjct: 185 SKGIAVRSGRQTERRAKRARAAKKDASGVINVKRGTSGKKKRSSFQEVDYSDPLRYLRGT 244
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE+ELS+GIQDL+KLE+L+E+L + G QPTFAQWA AG+DQKTLRKRL
Sbjct: 245 TSTSKLLSAVEELELSKGIQDLLKLERLREELVGRNGGQPTFAQWATAAGIDQKTLRKRL 304
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
N G FCK+KMIKSNIRLVISIAKNYQ AG++LQDLVQEG RGLV+GAEKFDASKGFKFST
Sbjct: 305 NDGTFCKDKMIKSNIRLVISIAKNYQNAGLSLQDLVQEGYRGLVKGAEKFDASKGFKFST 364
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
YAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRV+EA+KQLYSENGRHPD EVA ATGL
Sbjct: 365 YAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDYVEVAVATGL 424
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
SMKR+ VLLTPKAPRSL+QKIGINQNLKPSEV+ADPEAET+EE LIK+FMK DL KVLD
Sbjct: 425 SMKRVETVLLTPKAPRSLDQKIGINQNLKPSEVMADPEAETSEEILIKKFMKADLNKVLD 484
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXX 559
+LNPREKQV+RWRFG+D+ R+KTLQEIG+++GVSRERIRQIESCAF
Sbjct: 485 TLNPREKQVLRWRFGLDNERIKTLQEIGKLMGVSRERIRQIESCAFRKLKSKKKMRNLRQ 544
Query: 560 YLVS 563
YL+S
Sbjct: 545 YLIS 548
>M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra030732 PE=4 SV=1
Length = 570
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/363 (72%), Positives = 298/363 (82%), Gaps = 1/363 (0%)
Query: 203 ITARSSRQTERKAKRVRATEKATTNI-VSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
+ RS+RQTERKA+R + EK + + S K+ S+SRKKRV QE+D++DP
Sbjct: 208 VLVRSTRQTERKARRAKGLEKTASCMQSSVKTSSSSRKKRVASQEIDHNDPLRYLRMTTS 267
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE ELSEGIQDL+KLE+LQ +L E+CG QPTF QWA+ AGVDQKTLRKR+N+
Sbjct: 268 SSKLLTAREETELSEGIQDLLKLERLQVELTERCGHQPTFGQWASAAGVDQKTLRKRINH 327
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G CK++MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYA
Sbjct: 328 GTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 387
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+ P +EEVAEATGLSM
Sbjct: 388 HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGQKPKNEEVAEATGLSM 447
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
KRL AVLL PK PRSL+QKIGIN NLKPSEVI+DPEAET+E+ LIKQFM++DL+KVLDSL
Sbjct: 448 KRLMAVLLAPKPPRSLDQKIGINLNLKPSEVISDPEAETSEDILIKQFMREDLDKVLDSL 507
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
+ REKQVIRWRFGM+DGRMKTLQEIGE +GVSRER+RQIES AF YL
Sbjct: 508 STREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 567
Query: 562 VSQ 564
VSQ
Sbjct: 568 VSQ 570
>R0IRV2_9BRAS (tr|R0IRV2) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008711mg PE=4 SV=1
Length = 487
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/269 (75%), Positives = 228/269 (84%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
S+ RS+RQTERKA+R + EK+ + I S K+GS+ RKKRV QEVD++DP
Sbjct: 208 SLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTS 267
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE ELS GIQDL+KLE+LQ +L E+CG QPTF+QWA+ AGVDQK+LRKR+NY
Sbjct: 268 SSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINY 327
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G CK+KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYA
Sbjct: 328 GTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 387
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLY+E GRHP++EEVAEATGLSM
Sbjct: 388 HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSM 447
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
KRL AVLL+PK PRSL+QKIG+NQNLKPS
Sbjct: 448 KRLMAVLLSPKPPRSLDQKIGMNQNLKPS 476
>J3N844_ORYBR (tr|J3N844) Uncharacterized protein OS=Oryza brachyantha
GN=OB11G19800 PE=4 SV=1
Length = 562
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/361 (54%), Positives = 255/361 (70%), Gaps = 2/361 (0%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
SI +S+RQTERKA+R RA KA T + + + S+S KK+ ++P
Sbjct: 199 SIAVKSARQTERKARRTRAAIKAATAVRTPQKPSSSSKKKRSKGPSSGTNPLSSLWKMTG 258
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE+E SEGIQDL+KLE +Q +LAE G QPTF+QWA AG+D++TLRKRL++
Sbjct: 259 RRLLTAK-EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFSQWATAAGIDERTLRKRLDH 317
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
GI+CK +M+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+
Sbjct: 318 GIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYS 377
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+AE TG+ +
Sbjct: 378 HWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECMKRLRRKLKRRPTNEEIAEDTGMPI 437
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
KR+ A + PK SL+ KIG + ++ EV ADP AETAEE L + MK+D+ K LD+L
Sbjct: 438 KRVEAAVNLPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVHKALDTL 496
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
+ RE+QV+ RFG+DDGR++TLQEIG +GVSRERIRQIES AF YL
Sbjct: 497 SARERQVVTLRFGLDDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYL 556
Query: 562 V 562
V
Sbjct: 557 V 557
>Q9ZPL2_MAIZE (tr|Q9ZPL2) Sigma factor SIG2A OS=Zea mays GN=sig2A PE=2 SV=1
Length = 539
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 272/424 (64%), Gaps = 18/424 (4%)
Query: 142 DNLLLNWIQHMEAEDVVAGGSMGAGAEVMEAVD---ISPSEEEFDDAXXXXXXXXXXXXX 198
DN L N I E + M A +ME +D I +E+E D
Sbjct: 126 DNYLANEILRTEMRS--SSPDMYANNPLMEYLDSYGIMDAEDELD-----------AYAQ 172
Query: 199 XSNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ +I +S+RQ+ERKA+R RA KA+T + + + + S KK+ +P
Sbjct: 173 YTENIAVKSARQSERKARRTRAAIKASTTLHASQKVALSSKKKRSKGSSSSMNPLGSLWK 232
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
EE+E SEGIQDL+KLE +Q +L E G QPTF+QWA AGVD+KTLRKR
Sbjct: 233 MTGRRLLTAK-EEVEFSEGIQDLLKLEAIQAELIEYNGGQPTFSQWATAAGVDEKTLRKR 291
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
LNYGI+CK +M+ SN+RLVISIA+ ++G GM+ DL+QEG +GL+RGAEKFD+SKGF+FS
Sbjct: 292 LNYGIYCKNRMVTSNVRLVISIAREFEGPGMDFYDLIQEGMQGLIRGAEKFDSSKGFRFS 351
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG
Sbjct: 352 TYSHWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECTKRLRRKLRRRPTNEEIAVDTG 411
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
+ +KR+ A + PK SL+ KIG + ++ EV ADP AETAEE L + MKKD+ L
Sbjct: 412 IPIKRVEAAVNLPKYSVSLDSKIG-STDMTYQEVTADPSAETAEEMLNRMSMKKDVHMAL 470
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXX 558
D+L REKQV+ RFG++DGR++TLQEIG ++GVSRERIRQIES AF
Sbjct: 471 DTLTTREKQVVVLRFGLEDGRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKKVKALK 530
Query: 559 XYLV 562
YLV
Sbjct: 531 DYLV 534
>K7UQN4_MAIZE (tr|K7UQN4) Sigma factor SIG2A OS=Zea mays GN=ZEAMMB73_618688 PE=4
SV=1
Length = 539
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 272/424 (64%), Gaps = 18/424 (4%)
Query: 142 DNLLLNWIQHMEAEDVVAGGSMGAGAEVMEAVD---ISPSEEEFDDAXXXXXXXXXXXXX 198
DN L N I E + M A +ME +D I +E+E D
Sbjct: 126 DNYLANEILRTEMRS--SSPDMYANNPLMEYLDSYGIMDAEDELD-----------AYAQ 172
Query: 199 XSNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ +I +S+RQ+ERKA+R RA KA+T + + + + S KK+ +P
Sbjct: 173 YTENIAVKSARQSERKARRTRAAIKASTTLHASQKVALSSKKKRSKGSSSSMNPLGSLWK 232
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
EE+E SEGIQDL+KLE +Q +L E G QPTF+QWA AGVD+KTLRKR
Sbjct: 233 MTGRRLLTAK-EEVEFSEGIQDLLKLEAIQAELIEYNGGQPTFSQWATAAGVDEKTLRKR 291
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
LNYGI+CK +M+ SN+RLVISIA+ ++G GM+ DL+QEG +GL+RGAEKFD+SKGF+FS
Sbjct: 292 LNYGIYCKNRMVTSNVRLVISIAREFEGPGMDFYDLIQEGMQGLIRGAEKFDSSKGFRFS 351
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG
Sbjct: 352 TYSHWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECTKRLRRKLRRRPTNEEIAVDTG 411
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
+ +KR+ A + PK SL+ KIG + ++ EV ADP AETAEE L + MKKD+ L
Sbjct: 412 IPIKRVEAAVNLPKYSVSLDSKIG-STDMTYQEVTADPSAETAEEMLNRMSMKKDVHMAL 470
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXX 558
D+L REKQV+ RFG++DGR++TLQEIG ++GVSRERIRQIES AF
Sbjct: 471 DTLTTREKQVVVLRFGLEDGRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKKVKALK 530
Query: 559 XYLV 562
YLV
Sbjct: 531 DYLV 534
>Q7XXT0_ORYSJ (tr|Q7XXT0) Plastid sigma factor 2A OS=Oryza sativa subsp. japonica
GN=OsSig2A PE=2 SV=1
Length = 564
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 251/361 (69%), Gaps = 2/361 (0%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
SI +S+RQTE +A+R RA KA T + + +TS KK+ ++P
Sbjct: 201 SIAVKSARQTEGRARRTRAAIKAATIVRTSPKPATSSKKKRSKGASSGTNPLGSLWKMTG 260
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE+E SEGIQDL+KLE +Q +LAE G QPTFAQWA AGVD++TLRKRL++
Sbjct: 261 RRLLTAK-EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFAQWATAAGVDERTLRKRLDH 319
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
GI+CK +M+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+
Sbjct: 320 GIYCKNRMVTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYS 379
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +
Sbjct: 380 HWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECIKRLRRKLKRRPTNEEIAADTGMPI 439
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
KR+ A + PK SL+ KIG + ++ EV ADP AETAEE L + MK+D+ K LD+L
Sbjct: 440 KRVEAAVNLPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVHKALDTL 498
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
RE+QV+ RFG++DGR++TLQEIG +GVSRERIRQIES AF YL
Sbjct: 499 TTRERQVVTLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYL 558
Query: 562 V 562
V
Sbjct: 559 V 559
>Q53JE7_ORYSJ (tr|Q53JE7) Sigma-70 region 3, putative OS=Oryza sativa subsp.
japonica GN=LOC_Os11g26160 PE=2 SV=1
Length = 563
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/294 (59%), Positives = 223/294 (75%), Gaps = 1/294 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+E SEGIQDL+KLE +Q +LAE G QPTFAQWA AGVD++TLRKRL++GI+CK +M
Sbjct: 268 EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFAQWATAAGVDERTLRKRLDHGIYCKNRM 327
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 328 VTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAM 387
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +KR+ A +
Sbjct: 388 RKSVSEQSQIFRLPAHMVEASYRVKECIKRLRRKLKRRPTNEEIAADTGMPIKRVEAAVN 447
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL+ KIG + ++ EV ADP AETAEE L + MK+D+ K LD+L RE+QV+
Sbjct: 448 LPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVHKALDTLTTRERQVV 506
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVS 563
RFG++DGR++TLQEIG +GVSRERIRQIES AF YLV+
Sbjct: 507 TLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYLVT 560
>K3ZHZ3_SETIT (tr|K3ZHZ3) Uncharacterized protein OS=Setaria italica
GN=Si026193m.g PE=4 SV=1
Length = 537
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 253/363 (69%), Gaps = 2/363 (0%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXX 259
+ +I +S+RQ+ER+A+R RA KA T + + + +TS KK+ P +P
Sbjct: 172 TENIAVKSARQSERRARRTRAAIKAATTVRASQKTATSSKKKRPKGSSPSMNPLGSLWKM 231
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE+E SEGIQDL+KLE +Q +L E G QPTF+QWA A D+KTLRKRL
Sbjct: 232 TGRRLLTAK-EEVEFSEGIQDLLKLEAIQAELTEYNGGQPTFSQWATAARTDEKTLRKRL 290
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
++GI+CK +M+ SN+RLVISIA+ ++G GM+L DL+QEG +GL+RGAEKFDASKGF+FST
Sbjct: 291 DHGIYCKNRMVTSNVRLVISIAREFEGPGMDLYDLIQEGMQGLIRGAEKFDASKGFRFST 350
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
Y+HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+
Sbjct: 351 YSHWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECTKRLRRKLRRRPTNEEIAVDTGM 410
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
+KR+ A + PK SL+ KIG + ++ EV ADP AETAEE L + MKKD+ + LD
Sbjct: 411 PIKRVEAAVNLPKYSVSLDSKIG-STDMTYQEVTADPSAETAEEMLNRLSMKKDVHQALD 469
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXX 559
+L REKQV+ RFG++DGR++TLQEIG ++GVSRERIRQIES AF
Sbjct: 470 TLTAREKQVVVLRFGLEDGRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKRVKALKD 529
Query: 560 YLV 562
YLV
Sbjct: 530 YLV 532
>I1QZW7_ORYGL (tr|I1QZW7) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 564
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 223/293 (76%), Gaps = 1/293 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+E SEGIQDL+KLE +Q +LAE G QPTFAQWA AGVD++TLRKRL++GI+CK +M
Sbjct: 268 EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFAQWATAAGVDERTLRKRLDHGIYCKNRM 327
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 328 VTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAM 387
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +KR+ A +
Sbjct: 388 RKSVSEQSQIFRLPAHMVEASYRVKECIKRLRRKLKRRPTNEEIAADTGMPIKRVEAAVN 447
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL+ KIG + ++ EV ADP AETAEE L + MK+D++K LD+L RE+QV+
Sbjct: 448 LPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVQKALDTLTTRERQVV 506
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
RFG++DGR++TLQEIG +GVSRERIRQIES AF YLV
Sbjct: 507 TLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYLV 559
>Q53KH8_ORYSJ (tr|Q53KH8) Os11g0448400 protein OS=Oryza sativa subsp. japonica
GN=Os11g0448400 PE=4 SV=1
Length = 564
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 222/293 (75%), Gaps = 1/293 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+E SEGIQDL+KLE +Q +LAE G QPTFAQWA AGVD++TLRKRL++GI+CK +M
Sbjct: 268 EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFAQWATAAGVDERTLRKRLDHGIYCKNRM 327
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 328 VTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAM 387
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +KR+ A +
Sbjct: 388 RKSVSEQSQIFRLPAHMVEASYRVKECIKRLRRKLKRRPTNEEIAADTGMPIKRVEAAVN 447
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL+ KIG + ++ EV ADP AETAEE L + MK+D+ K LD+L RE+QV+
Sbjct: 448 LPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVHKALDTLTTRERQVV 506
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
RFG++DGR++TLQEIG +GVSRERIRQIES AF YLV
Sbjct: 507 TLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYLV 559
>B8AUZ3_ORYSI (tr|B8AUZ3) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_14770 PE=2 SV=1
Length = 563
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 222/293 (75%), Gaps = 1/293 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+E SEGIQDL+KLE +Q +LAE G QPTFAQWA AGVD++TLRKRL++GI+CK +M
Sbjct: 267 EEVEFSEGIQDLLKLEAIQAELAEYNGGQPTFAQWATAAGVDERTLRKRLDHGIYCKNRM 326
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLVISIA+ ++G GM L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 327 VTSNVRLVISIAREFEGPGMELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAM 386
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +KR+ A +
Sbjct: 387 RKSVSEQSQIFRLPAHMVEASYRVKECIKRLRRKLKRRPTNEEIAADTGMPIKRVEAAVN 446
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL+ KIG + ++ EV ADP AETAEE L + MK+D+ K LD+L RE+QV+
Sbjct: 447 LPKYSVSLDSKIG-STDMTYQEVTADPTAETAEEMLNRLSMKRDVHKALDTLTTRERQVV 505
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
RFG++DGR++TLQEIG +GVSRERIRQIES AF YLV
Sbjct: 506 TLRFGLEDGRIRTLQEIGNTMGVSRERIRQIESAAFRKLRSKKRVNALKDYLV 558
>K3ZHZ1_SETIT (tr|K3ZHZ1) Uncharacterized protein OS=Setaria italica
GN=Si026193m.g PE=4 SV=1
Length = 543
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 193/368 (52%), Positives = 252/368 (68%), Gaps = 6/368 (1%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXX 259
+ +I +S+RQ+ER+A+R RA KA T + + + +TS KK+ P +P
Sbjct: 172 TENIAVKSARQSERRARRTRAAIKAATTVRASQKTATSSKKKRPKGSSPSMNPLGSLWKM 231
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE+E SEGIQDL+KLE +Q +L E G QPTF+QWA A D+KTLRKRL
Sbjct: 232 TGRRLLTAK-EEVEFSEGIQDLLKLEAIQAELTEYNGGQPTFSQWATAARTDEKTLRKRL 290
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
++GI+CK +M+ SN+RLVISIA+ ++G GM+L DL+QEG +GL+RGAEKFDASKGF+FST
Sbjct: 291 DHGIYCKNRMVTSNVRLVISIAREFEGPGMDLYDLIQEGMQGLIRGAEKFDASKGFRFST 350
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
Y+HWWIKQA+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+
Sbjct: 351 YSHWWIKQAMRKSVSEQSQIFRLPAHMVEASYRVKECTKRLRRKLRRRPTNEEIAVDTGM 410
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQ-----NLKPSEVIADPEAETAEEQLIKQFMKKDL 494
+KR+ A + PK SL+ KIG NL EV ADP AETAEE L + MKKD+
Sbjct: 411 PIKRVEAAVNLPKYSVSLDSKIGSTDMTYQLNLCFQEVTADPSAETAEEMLNRLSMKKDV 470
Query: 495 EKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXX 554
+ LD+L REKQV+ RFG++DGR++TLQEIG ++GVSRERIRQIES AF
Sbjct: 471 HQALDTLTAREKQVVVLRFGLEDGRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKRV 530
Query: 555 XXXXXYLV 562
YLV
Sbjct: 531 KALKDYLV 538
>F2CZB8_HORVD (tr|F2CZB8) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 552
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 266/402 (66%), Gaps = 16/402 (3%)
Query: 162 SMGAGAEVMEAVDISPSEEEFDDAXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRAT 221
S G + V+E I E E DD + +I +S+RQ+ER+A+R RAT
Sbjct: 161 SDGVLSGVLEPYGIPSDEAELDD-----------DKQDAENIAVKSARQSERRARRTRAT 209
Query: 222 EKATTNI-VSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQD 280
KA + S K ++S+KKR + +P EE+ELS GIQD
Sbjct: 210 MKAAITVRGSLKLVTSSKKKR--SKGPSTMNP-LGSLWKMTGRKLLTAKEEVELSNGIQD 266
Query: 281 LIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISI 340
L+KLE +Q +LAE G QPTF QWAA AG D+ TLRKRL++GI CK +M+ SN+RLVISI
Sbjct: 267 LLKLEAIQGELAEYNGGQPTFPQWAAAAGTDENTLRKRLDHGIHCKNRMVTSNVRLVISI 326
Query: 341 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 400
A+ ++G G+ L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+RKS+S+Q++
Sbjct: 327 AREFEGPGLELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAMRKSVSEQTQIF 386
Query: 401 RLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQK 460
RLP HMVEA+YRVKE K+L + R P +EE+A G+ +KR+ A + PK SL+ K
Sbjct: 387 RLPAHMVEASYRVKECTKRLRRKLKRRPSNEEIAVDIGMPVKRVEAAVSLPKYSVSLDSK 446
Query: 461 IGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRM 520
IG + ++ EV ADP AETAEE L + MKKD+ + LD+L+PRE+QV++ RFG++DGR+
Sbjct: 447 IG-STDMTYQEVTADPSAETAEEMLNRMSMKKDVHQALDTLSPRERQVVKLRFGINDGRI 505
Query: 521 KTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
+TLQEIG ++GVSRERIRQIES AF YLV
Sbjct: 506 RTLQEIGNIMGVSRERIRQIESGAFRKLRGKKKVKCLMDYLV 547
>M0XE63_HORVD (tr|M0XE63) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 548
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 245/363 (67%), Gaps = 7/363 (1%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKS-GSTSRKKRVPVQEVDYSDPXXXXXX 258
+ + +S+RQ ERKA+RVRA KA + + ++SRKKRV
Sbjct: 186 ARGVAVKSARQPERKARRVRAAMKAAKSFSDRRPVMASSRKKRV-----KGCRNSLGCFY 240
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+ELSEGIQDL+KLE +Q+++A G +PTF QWAA AG D+ TLRKR
Sbjct: 241 KMSGRKLLTAKQEVELSEGIQDLLKLEAIQKEVAHYNGGEPTFGQWAAAAGTDENTLRKR 300
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L+ GI+CK M+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FS
Sbjct: 301 LSDGIYCKNMMVKSNVRLVISIAKEFEGPGTEFSDLIQEGIQGLIRGAEKFDASKGFRFS 360
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE+R++L + R P +EE+A TG
Sbjct: 361 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKESRRRLRRQLNRLPTNEEIALDTG 420
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
++ +R+ A + P+ SL K+G ++ E+ AD ETAEE L + FMKKD++K L
Sbjct: 421 MTARRVEAAMCLPRYSVSLTGKVGCT-DVTYQEITADKSTETAEETLHRLFMKKDVDKAL 479
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXX 558
DSL PRE++VIR+RFGMDDG+ +TL +IG+++GVSRERIRQIE AF
Sbjct: 480 DSLTPREREVIRYRFGMDDGKARTLHDIGQLMGVSRERIRQIEMAAFRKLRSKKKVTSLQ 539
Query: 559 XYL 561
YL
Sbjct: 540 HYL 542
>M0XE64_HORVD (tr|M0XE64) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 427
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 245/363 (67%), Gaps = 7/363 (1%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFK-SGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ + +S+RQ ERKA+RVRA KA + + ++SRKKRV
Sbjct: 65 ARGVAVKSARQPERKARRVRAAMKAAKSFSDRRPVMASSRKKRVK-----GCRNSLGCFY 119
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+ELSEGIQDL+KLE +Q+++A G +PTF QWAA AG D+ TLRKR
Sbjct: 120 KMSGRKLLTAKQEVELSEGIQDLLKLEAIQKEVAHYNGGEPTFGQWAAAAGTDENTLRKR 179
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L+ GI+CK M+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FS
Sbjct: 180 LSDGIYCKNMMVKSNVRLVISIAKEFEGPGTEFSDLIQEGIQGLIRGAEKFDASKGFRFS 239
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE+R++L + R P +EE+A TG
Sbjct: 240 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKESRRRLRRQLNRLPTNEEIALDTG 299
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
++ +R+ A + P+ SL K+G ++ E+ AD ETAEE L + FMKKD++K L
Sbjct: 300 MTARRVEAAMCLPRYSVSLTGKVGCT-DVTYQEITADKSTETAEETLHRLFMKKDVDKAL 358
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXX 558
DSL PRE++VIR+RFGMDDG+ +TL +IG+++GVSRERIRQIE AF
Sbjct: 359 DSLTPREREVIRYRFGMDDGKARTLHDIGQLMGVSRERIRQIEMAAFRKLRSKKKVTSLQ 418
Query: 559 XYL 561
YL
Sbjct: 419 HYL 421
>K4A8A6_SETIT (tr|K4A8A6) Uncharacterized protein OS=Setaria italica
GN=Si035112m.g PE=4 SV=1
Length = 532
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 221/292 (75%), Gaps = 1/292 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+E SEGIQDL+KLE +Q++LA GD+PTF+QWAA AG D+ TLRKRLNYG++CK +M
Sbjct: 236 QEVEFSEGIQDLLKLEAIQKELAHYNGDEPTFSQWAAAAGTDENTLRKRLNYGVYCKNRM 295
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIA+ ++G GM+ DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 296 VKSNVRLVISIAREHEGPGMDFSDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 355
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q+ IRLP HM EA+ RVKE R++L+ + R P +EE+A TG+ ++R+ A +
Sbjct: 356 RKSVLEQTHIIRLPSHMAEASSRVKECRRRLHRQLKRLPSNEEIALDTGMPIRRVEAAMS 415
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
P+ SL K+G ++ E++ D AETAEE L + MKKD++K LDSL+PREKQV+
Sbjct: 416 LPRYSVSLSSKVGCT-DVTYQEIMPDTSAETAEEVLHRWLMKKDVDKALDSLSPREKQVL 474
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
R+RFG++ GR +TL +IG+++GVSRERIRQIE AF YL
Sbjct: 475 RYRFGIEGGRPRTLHDIGQLMGVSRERIRQIELGAFRKLRAKKKVQSLQHYL 526
>I1ILU6_BRADI (tr|I1ILU6) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI4G19540 PE=4 SV=1
Length = 552
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 219/293 (74%), Gaps = 1/293 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ELS GIQDL+KLE +Q +LAE G QPTF QWAA AG D+KTLRKRL +GI+ K +M
Sbjct: 256 EEVELSNGIQDLLKLEAIQAELAEYSGCQPTFPQWAAAAGTDEKTLRKRLAHGIYSKNRM 315
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLVISIA+ ++G G+ L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 316 VTSNVRLVISIAREFEGPGLELYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAM 375
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+S+Q++ RLP HMVEA+YRVKE ++L R P +EE+A G+ +KR+ A +
Sbjct: 376 RKSVSEQTQIFRLPAHMVEASYRVKECTRRLRRTLQRRPSNEEIAVDIGMPVKRVEAAVN 435
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL+ KIG ++ EV ADP AETAEE L + MKKD+ + LD+L PRE+QV+
Sbjct: 436 LPKYSVSLDSKIGTT-DMSYQEVTADPSAETAEEMLNRMSMKKDVHQALDALGPRERQVV 494
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
+ RFG+DDGR++TLQEIG ++GVSRERIRQIE+ AF YLV
Sbjct: 495 KLRFGLDDGRIRTLQEIGNIMGVSRERIRQIEAGAFRKLRSKKKVKSLRDYLV 547
>I1H713_BRADI (tr|I1H713) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI1G66830 PE=4 SV=1
Length = 537
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/276 (59%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+ELSEGIQD +KLE +Q+++A G +PTF QWAA AG D+ TLRKRL+YGI+CK M
Sbjct: 241 QEVELSEGIQDFLKLEAIQKEVAHYNGGEPTFTQWAAAAGTDENTLRKRLSYGIYCKNMM 300
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 301 VKSNVRLVISIAKEFEGPGTEFSDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 360
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TGL+ +R+ A +
Sbjct: 361 RKSVLEQTQIIRLPTHMAEASSRVKECRRRLRRQLNRLPTNEEIASDTGLTTRRVEAAMS 420
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
P+ SL K+G ++ E++ D ETAEE L + FMKKD++ LDSL+PRE++VI
Sbjct: 421 LPRYSVSLSGKVGCT-DVTYQEIMPDKSTETAEETLHRWFMKKDVDTALDSLSPREREVI 479
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+RFGMDDGRM+TL IGE++GVSRERIRQIE AF
Sbjct: 480 RYRFGMDDGRMRTLHNIGELMGVSRERIRQIEMAAF 515
>C5WQ19_SORBI (tr|C5WQ19) Putative uncharacterized protein Sb01g039810 OS=Sorghum
bicolor GN=Sb01g039810 PE=4 SV=1
Length = 528
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/348 (50%), Positives = 245/348 (70%), Gaps = 8/348 (2%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKS--GSTSRKKRVPVQEVDYSDPXXXXX 257
S ++ +S+R+TERKA+RVRA KA S + S++RKKR+ +
Sbjct: 165 SIAVAVKSARRTERKARRVRAAMKAAKCFSSRNAVGASSTRKKRLKGCQTPLG-----CF 219
Query: 258 XXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRK 317
+E+E SEGIQDL+KLE +Q+++A+ G +PTF+QWAA AG D+ TLR+
Sbjct: 220 YKMTGPRLLTAEQEVEFSEGIQDLLKLEAIQKEVAQYNGGEPTFSQWAAAAGTDENTLRR 279
Query: 318 RLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 377
RLN+G++CK +M+KSN+RLVISIAK ++G GM DL+QEG +GL+RGAEKFDASKGF+F
Sbjct: 280 RLNHGVYCKNRMVKSNVRLVISIAKEHEGPGMEFSDLIQEGMQGLIRGAEKFDASKGFRF 339
Query: 378 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAT 437
STY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE ++L E R P +EE+A T
Sbjct: 340 STYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECCRRLRRELKRLPSNEEIAVDT 399
Query: 438 GLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKV 497
G++++R+ A + PK S K+G ++ E++ D AETAEE L + MKKD+
Sbjct: 400 GMTIRRVEAAMSLPKYSVSFTSKVGCT-DVTYQEIMPDTSAETAEEVLHRWLMKKDVNTA 458
Query: 498 LDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+SL+PREK V+R+RFG++ GR +TL +IG+++GVSRERIRQIE AF
Sbjct: 459 LESLSPREKLVMRYRFGIEGGRPRTLHDIGQIMGVSRERIRQIELGAF 506
>M8AUB6_AEGTA (tr|M8AUB6) RNA polymerase sigma factor rpoD OS=Aegilops tauschii
GN=F775_32094 PE=4 SV=1
Length = 546
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 217/292 (74%), Gaps = 1/292 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+ELS+GIQDL+KLE +Q+++A G +PTF QWAA AG D+ TLRKRL++GI+CK M
Sbjct: 250 QEVELSQGIQDLLKLEAVQKEVAHYNGGEPTFGQWAAAAGTDENTLRKRLSHGIYCKNMM 309
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 310 VKSNVRLVISIAKEFEGPGTEFSDLIQEGIQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 369
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG++ +R+ A +
Sbjct: 370 RKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLNRLPTNEEIALDTGMTARRVEAAMC 429
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
P+ SL K+G ++ E+ AD ETAEE L + FMKKD++K LDSL PRE++VI
Sbjct: 430 LPRYSVSLTGKVGCT-DVTYQEITADKSTETAEETLHRLFMKKDVDKALDSLTPREREVI 488
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
R+RFGMDDG+ +TL +IG++LGVSRERIRQIE AF YL
Sbjct: 489 RYRFGMDDGKARTLHDIGQLLGVSRERIRQIEMAAFRKLRSKKKVTSLQHYL 540
>Q10NF3_ORYSJ (tr|Q10NF3) Sigma-70 region 3 family protein, expressed OS=Oryza
sativa subsp. japonica GN=LOC_Os03g16430 PE=2 SV=1
Length = 343
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 212/276 (76%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+E S+GIQDL+KLE +Q++LA G +PTF+QWA AG D+ TLRKRLNYGI CK M
Sbjct: 47 QEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKRLNYGISCKNTM 106
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 107 VKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFSTYSHWWIKQAI 166
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG+ ++R+ A +
Sbjct: 167 RKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTGMPLRRVEAAMS 226
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL K+G ++ E+ D ETAEE L + MK+D+++ LD L+PRE+QVI
Sbjct: 227 LPKYTVSLTSKVGCT-DMTYQEITPDTSTETAEEMLHRWLMKEDVDRALDGLSPRERQVI 285
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+RFGMDDGR++TL +IG ++GVSRERIRQIE AF
Sbjct: 286 RYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAF 321
>F1DJX7_MAIZE (tr|F1DJX7) SIGMA70-like transcription factor (Fragment) OS=Zea
mays PE=2 SV=1
Length = 428
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/276 (56%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+E SEGIQDL+KLE +Q+++A+ +PTF+QWAA AG D+ TLR+RLN+G++CK +M
Sbjct: 132 QEVEFSEGIQDLLKLEAIQKEVAQYNAGEPTFSQWAAAAGTDENTLRRRLNHGVYCKNRM 191
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIAK ++G GM DL+Q+G +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 192 VKSNVRLVISIAKEHEGPGMEFSDLIQDGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 251
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE ++L E R P +EE+A TG++++R+ A +
Sbjct: 252 RKSVLEQTQIIRLPAHMAEASSRVKECCRRLGRELKRLPSNEEIAVDTGMTIRRVEAAMS 311
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK S K+G ++ E++ D AETAEE L + MKKD+ LDSL+PREKQV+
Sbjct: 312 LPKYSVSFTSKVGCT-DVTYQEIMPDTSAETAEETLHRWLMKKDVNTALDSLSPREKQVM 370
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+RFG++ GR +TL +IG+++GVSRERIRQIE AF
Sbjct: 371 RYRFGIEGGRARTLHDIGQLMGVSRERIRQIELGAF 406
>J3LME6_ORYBR (tr|J3LME6) Uncharacterized protein OS=Oryza brachyantha
GN=OB03G22220 PE=4 SV=1
Length = 533
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 211/276 (76%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+E S+GIQDL+KLE +Q++LA +PTF+QWA AG D+ LRKRLNYGI+CK M
Sbjct: 237 QEVEFSQGIQDLLKLEAIQKELAHYSSGEPTFSQWAEAAGTDENALRKRLNYGIYCKNTM 296
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 297 VKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFSTYSHWWIKQAI 356
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE +++L + R P +EE+A TGL ++R+ A +
Sbjct: 357 RKSVLEQTQIIRLPAHMAEASSRVKECQRRLRRQLKRLPTNEEIASDTGLPLRRVEAAMS 416
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK SL K+G ++ E+ D AETAE+ L + MKKD++ LD L+PRE+QVI
Sbjct: 417 LPKYSVSLTGKVGCT-DMTYQEITPDTSAETAEQMLHRWLMKKDVDMALDGLSPRERQVI 475
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+RFGMDDGR++TL + G+++GVSRERIRQIE AF
Sbjct: 476 RYRFGMDDGRLRTLHDTGKLMGVSRERIRQIELGAF 511
>Q9ZPL1_MAIZE (tr|Q9ZPL1) Sigma factor SIG2B OS=Zea mays GN=sig2B PE=2 SV=1
Length = 527
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 214/276 (77%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+E+E SEGIQDL+KLE +Q+++A+ +PTF+QWAA AG D+ TLR+RLN+G++CK +M
Sbjct: 231 QEVEFSEGIQDLLKLEAIQKEVAQYNAGEPTFSQWAAAAGTDENTLRRRLNHGVYCKNRM 290
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIAK ++G GM DL+Q+G +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 291 VKSNVRLVISIAKEHEGPGMEFSDLIQDGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 350
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE ++L E R P +EE+A TG++++R+ A +
Sbjct: 351 RKSVLEQTQIIRLPAHMAEASSRVKECCRRLGRELKRLPSNEEIAVDTGMTIRRVEAAMS 410
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
PK S K+G ++ E++ D AETAEE L + MKKD+ LDSL+PR+KQV+
Sbjct: 411 LPKYSVSFTSKVGCT-DVTYQEIMPDTSAETAEETLHRWLMKKDVNTALDSLSPRKKQVM 469
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+RFG++ GR +TL +IG+++GVSRERIRQIE AF
Sbjct: 470 RYRFGIEGGRARTLHDIGQLMGVSRERIRQIELGAF 505
>I1P9X2_ORYGL (tr|I1P9X2) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 541
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 233/347 (67%), Gaps = 8/347 (2%)
Query: 202 SITARSSRQTERK---AKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ +S RQ+ER+ + K+ + + S++RKKR+ P
Sbjct: 178 GVAVKSVRQSERRARRVRAAMKAAKSFSGRNPVAASSSARKKRLK----GCRSP-LGCFY 232
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+E S+GIQDL+KLE +Q++LA G +PTF+QWA AG D+ TLRKR
Sbjct: 233 KMTGRRLLTAKQEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKR 292
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
LNYGI CK M+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FS
Sbjct: 293 LNYGISCKNTMVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFS 352
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG
Sbjct: 353 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTG 412
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
+ ++R+ A + PK SL K+G E+ D ETAEE L + MK+D+++ L
Sbjct: 413 MPLRRVEAAMSLPKYTVSLTSKVGCTDMTYQQEITPDTSTETAEEMLHRWLMKEDVDRAL 472
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AF
Sbjct: 473 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAF 519
>Q84Q84_ORYSJ (tr|Q84Q84) Os03g0271100 protein OS=Oryza sativa subsp. japonica
GN=OJ1261C08.7 PE=2 SV=1
Length = 540
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 235/347 (67%), Gaps = 9/347 (2%)
Query: 202 SITARSSRQTERK---AKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ +S RQ+ER+ + K+ + + S++RKKR+ P
Sbjct: 178 GVAVKSVRQSERRARRVRAAMKAAKSFSGRNPVAASSSARKKRLK----GCRSP-LGCFY 232
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+E S+GIQDL+KLE +Q++LA G +PTF+QWA AG D+ TLRKR
Sbjct: 233 KMTGRRLLTAKQEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKR 292
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
LNYGI CK M+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FS
Sbjct: 293 LNYGISCKNTMVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFS 352
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG
Sbjct: 353 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTG 412
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
+ ++R+ A + PK SL K+G ++ E+ D ETAEE L + MK+D+++ L
Sbjct: 413 MPLRRVEAAMSLPKYTVSLTSKVGCT-DMTYQEITPDTSTETAEEMLHRWLMKEDVDRAL 471
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AF
Sbjct: 472 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAF 518
>A2XF08_ORYSI (tr|A2XF08) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_10924 PE=2 SV=1
Length = 540
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 235/347 (67%), Gaps = 9/347 (2%)
Query: 202 SITARSSRQTERK---AKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ +S RQ+ER+ + K+ + + S++RKKR+ P
Sbjct: 178 GVAVKSVRQSERRARRVRAAMKAAKSFSGRNPVAASSSARKKRLK----GCRSP-LGCFY 232
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+E S+GIQDL+KLE +Q++LA G +PTF+QWA AG D+ TLRKR
Sbjct: 233 KMTGWRLLTAKQEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKR 292
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
LNYGI CK M+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FS
Sbjct: 293 LNYGISCKNTMVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFS 352
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG
Sbjct: 353 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTG 412
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
+ ++R+ A + PK SL K+G ++ E+ D ETAEE L + MK+D+++ L
Sbjct: 413 MPLRRVEAAMSLPKYTVSLTSKVGCT-DMTYQEITPDTSTETAEEMLHRWLMKEDVDRAL 471
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
D L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AF
Sbjct: 472 DGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAF 518
>A3AGH1_ORYSJ (tr|A3AGH1) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_10293 PE=2 SV=1
Length = 497
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 235/346 (67%), Gaps = 9/346 (2%)
Query: 203 ITARSSRQTERK---AKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXX 259
+ +S RQ+ER+ + K+ + + S++RKKR+ P
Sbjct: 136 VAVKSVRQSERRARRVRAAMKAAKSFSGRNPVAASSSARKKRLK----GCRSP-LGCFYK 190
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
+E+E S+GIQDL+KLE +Q++LA G +PTF+QWA AG D+ TLRKRL
Sbjct: 191 MTGRRLLTAKQEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKRL 250
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
NYGI CK M+KSN+RLVISIA+ ++G GM DL+QEG +GLVRGAEKFDASKGF+FST
Sbjct: 251 NYGISCKNTMVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFST 310
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
Y+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE R++L + R P +EE+A TG+
Sbjct: 311 YSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTGM 370
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
++R+ A + PK SL K+G ++ E+ D ETAEE L + MK+D+++ LD
Sbjct: 371 PLRRVEAAMSLPKYTVSLTSKVGCT-DMTYQEITPDTSTETAEEMLHRWLMKEDVDRALD 429
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+PRE+QVIR+RFGMDDGR++TL +IG ++GVSRERIRQIE AF
Sbjct: 430 GLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAF 475
>B8LLW6_PICSI (tr|B8LLW6) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 592
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/340 (50%), Positives = 233/340 (68%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
+ITARSSRQ ER+A+R RA+EKA + + +SRK + + +
Sbjct: 231 NITARSSRQMERRARRARASEKAASVASAISPTRSSRKGKKAISSKGHISDSIRLLRDWS 290
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE+ELS GIQDLIKL++++ EK G +PT AQWA V GVDQKTL+ RL
Sbjct: 291 SSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKMRLEV 350
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G +K+I N+RLVIS+AKNYQ G++LQDL+Q G GL+R AEKFD S+GFKFSTYA
Sbjct: 351 GRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKFSTYA 410
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
+WWI+Q++ K+L++QSRTIRLP H+VE+ R++ A + LY E+ R P EEVAE G+SM
Sbjct: 411 YWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVAGISM 470
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
RL V + P SL++ +G + + K SE++AD +E+ E + K+ KKDL++VLD+L
Sbjct: 471 TRLRHVTRCSRVPTSLDRCVGKDMDEKFSEIVADTNSESTETIVSKELFKKDLDRVLDTL 530
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIE 541
REKQV+R R+G+DDGRMK+L E+GE +SRER+RQIE
Sbjct: 531 TAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIE 570
>Q9AYR7_9BRYO (tr|Q9AYR7) PpSIG2 OS=Physcomitrella patens GN=Sig2 PE=2 SV=1
Length = 579
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/298 (50%), Positives = 211/298 (70%)
Query: 248 DYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAV 307
D SDP EE++LS IQDL+KLE ++ +L + G T +W+
Sbjct: 259 DPSDPVRAYLRDIGRTKLLTAREEVDLSHQIQDLLKLENIKSNLEREIGRNATIGEWSRA 318
Query: 308 AGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 367
G++Q RL G F K+KM+ SN+RLV+SIAKNYQG GM LQDL+QEG GLVRGAE
Sbjct: 319 VGMEQNAFEARLKKGRFAKDKMVNSNLRLVVSIAKNYQGRGMTLQDLIQEGSMGLVRGAE 378
Query: 368 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 427
KFD +KGFKFSTYAHWWI+QAV +S++DQSRTIRLP H+ E R+ +A++ L E+GR
Sbjct: 379 KFDPTKGFKFSTYAHWWIRQAVTRSIADQSRTIRLPIHLYEVISRINKAKRMLVQEHGRE 438
Query: 428 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIK 487
+EEVAE GL++++L +V+ + KAP S+E+ IG + + E++AD + ++ E+ ++K
Sbjct: 439 ARNEEVAELVGLTVEKLKSVVKSAKAPGSMERPIGKDGDTTLGELVADTDVDSPEDAIVK 498
Query: 488 QFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
Q M++D+E VL +LNPRE++V+R RFG+DDGR KTL+EIG++ V+RERIRQIE+ A
Sbjct: 499 QLMRQDIEGVLRTLNPREREVLRLRFGLDDGRSKTLEEIGQIFKVTRERIRQIEAKAM 556
>E1C9M6_PHYPA (tr|E1C9M6) Plastid sigma facor SIG2 OS=Physcomitrella patens
subsp. patens GN=PpSig2 PE=4 SV=1
Length = 579
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/298 (50%), Positives = 211/298 (70%)
Query: 248 DYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAV 307
D SDP EE++LS IQDL+KLE ++ +L + G T +W+
Sbjct: 259 DPSDPVRAYLRDIGRTKLLTAREEVDLSHQIQDLLKLENIKSNLEREIGRNATIGEWSRA 318
Query: 308 AGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 367
G++Q RL G F K+KM+ SN+RLV+SIAKNYQG GM LQDL+QEG GLVRGAE
Sbjct: 319 VGMEQNAFEARLKKGRFAKDKMVNSNLRLVVSIAKNYQGRGMTLQDLIQEGSMGLVRGAE 378
Query: 368 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 427
KFD +KGFKFSTYAHWWI+QAV +S++DQSRTIRLP H+ E R+ +A++ L E+GR
Sbjct: 379 KFDPTKGFKFSTYAHWWIRQAVTRSIADQSRTIRLPIHLYEVISRINKAKRMLVQEHGRE 438
Query: 428 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIK 487
+EEVAE GL++++L +V+ + KAP S+E+ IG + + E++AD + ++ E+ ++K
Sbjct: 439 ARNEEVAELVGLTVEKLKSVVKSAKAPGSMERPIGKDGDTTLGELVADTDVDSPEDAIVK 498
Query: 488 QFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
Q M++D+E VL +LNPRE++V+R RFG+DDGR KTL+EIG++ V+RERIRQIE+ A
Sbjct: 499 QLMRQDIEGVLRTLNPREREVLRLRFGLDDGRSKTLEEIGQIFKVTRERIRQIEAKAM 556
>B8LQB0_PICSI (tr|B8LQB0) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 495
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 236/360 (65%)
Query: 202 SITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
+ITARSSRQ ER+A+R RA+EKA + + +SRK + + +
Sbjct: 134 NITARSSRQMERRARRARASEKAASVASAISPTRSSRKGKKAISSKGHISDSIRLLRDWS 193
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE+ELS GIQDLIKL++++ EK G +PT AQWA V GVDQKTL+ RL
Sbjct: 194 SSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKMRLEV 253
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G +K+I N+RLVIS+AKNYQ G++LQDL+Q G GL+R AEKFD S+GFKFSTYA
Sbjct: 254 GRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKFSTYA 313
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
+WWI+Q++ K+L++QSRTIRLP H+VE+ R++ A + LY E+ R P EEVAE G+SM
Sbjct: 314 YWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVAGISM 373
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
RL V + P SL++ +G + + K SE++AD +E+ E + K+ KKDL++VLD+L
Sbjct: 374 TRLRHVTRCSRVPTSLDRCVGKDMDEKFSEIVADTNSESTETIVSKELFKKDLDRVLDTL 433
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
REKQV+R R+G+DDGRMK+L E+GE +SRER+RQIE A YL
Sbjct: 434 TAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIEMKAMRKLRQNHRTQHLKHYL 493
>K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 OS=Marchantia
polymorpha GN=Mpsig2 PE=2 SV=1
Length = 615
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 209/276 (75%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+EGIQDL+++E ++ DL E+ G +PT +WA G ++ +L R+ G CK++M
Sbjct: 322 EEIELAEGIQDLLRVESVKNDLREQMGREPTLMEWAKAVGTERHSLESRIKSGQACKDRM 381
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLV+SIAK YQG GM +QDL+QEG GL+RGAEKFD ++GFKFSTYAHWWI+QA+
Sbjct: 382 VNSNLRLVVSIAKRYQGRGMTIQDLIQEGSMGLIRGAEKFDHTRGFKFSTYAHWWIRQAI 441
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+ +A+ L +E+GR P DEEVAE GLS+++L V+
Sbjct: 442 TRAIADQSRTIRLPVHVYELLSRITKAKSMLAAEHGRAPRDEEVAELVGLSIEKLKMVIK 501
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ ++P+S+E +G N + EVI D + ++ EE + K+ +K+DL+ VL +L+PRE+ V+
Sbjct: 502 SARSPKSMEFPVGKNNDTTLGEVIPDKDIDSPEEAISKRLLKQDLDVVLHTLSPRERDVL 561
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRM+TL+EIG + V+RERIRQIE+ A
Sbjct: 562 RLRYGLDDGRMRTLEEIGNVFKVTRERIRQIEAKAL 597
>M0XE65_HORVD (tr|M0XE65) Uncharacterized protein (Fragment) OS=Hordeum vulgare
var. distichum PE=4 SV=1
Length = 340
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 212/292 (72%), Gaps = 1/292 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+++ + +DL+KLE +Q+++A G +PTF QWAA AG D+ TLRKRL+ GI+CK M
Sbjct: 44 KKLNYQKAFRDLLKLEAIQKEVAHYNGGEPTFGQWAAAAGTDENTLRKRLSDGIYCKNMM 103
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA+
Sbjct: 104 VKSNVRLVISIAKEFEGPGTEFSDLIQEGIQGLIRGAEKFDASKGFRFSTYSHWWIKQAI 163
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RKS+ +Q++ IRLP HM EA+ RVKE+R++L + R P +EE+A TG++ +R+ A +
Sbjct: 164 RKSVLEQTQIIRLPAHMAEASSRVKESRRRLRRQLNRLPTNEEIALDTGMTARRVEAAMC 223
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
P+ SL K+G ++ E+ AD ETAEE L + FMKKD++K LDSL PRE++VI
Sbjct: 224 LPRYSVSLTGKVGCT-DVTYQEITADKSTETAEETLHRLFMKKDVDKALDSLTPREREVI 282
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYL 561
R+RFGMDDG+ +TL +IG+++GVSRERIRQIE AF YL
Sbjct: 283 RYRFGMDDGKARTLHDIGQLMGVSRERIRQIEMAAFRKLRSKKKVTSLQHYL 334
>A9RTR4_PHYPA (tr|A9RTR4) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_160930 PE=4 SV=1
Length = 591
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 202/278 (72%), Gaps = 2/278 (0%)
Query: 270 EEIELSEGIQ--DLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKE 327
EE+ LS IQ DL+ LEK++ DL + G +P+ +W+ G++Q R+ G + K+
Sbjct: 293 EEVALSRKIQARDLLVLEKVKSDLQREIGREPSIGEWSRAVGMEQNAFELRVKEGRYSKD 352
Query: 328 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 387
KM+ SN+RLV+SI KNYQG GM L DL+QEG GL+RGAEKFD KGFKFSTYAHWWI+Q
Sbjct: 353 KMVNSNLRLVVSIVKNYQGRGMTLPDLIQEGSMGLIRGAEKFDPDKGFKFSTYAHWWIRQ 412
Query: 388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAV 447
AV ++++DQSR IRLP H+ E R+ +A+K L E+GR P DEEVAE G+S+++L +
Sbjct: 413 AVTRAIADQSRIIRLPIHLYEVISRINKAKKMLIQEHGRQPRDEEVAELVGMSVEKLKFI 472
Query: 448 LLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQ 507
+ + K P S+++ IG ++ E+IAD + E+ E+ LI+Q +K+D++ VL +LNPRE++
Sbjct: 473 VKSAKTPSSMDRLIGKEKDQSIGEMIADKDVESPEDDLIRQVLKQDVDGVLCTLNPRERE 532
Query: 508 VIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R RFG+DDG+ +TL+EIG + V+RERIRQIE+ A
Sbjct: 533 VLRLRFGLDDGQSRTLEEIGTLFKVTRERIRQIEAKAM 570
>K9Q1H6_9CYAN (tr|K9Q1H6) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7376 GN=Lepto7376_2997 PE=3 SV=1
Length = 379
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E PT +WA AG+ K R+RL +G K+KM
Sbjct: 88 EEIELARKIADLLELERMREQLEEHESRVPTDKEWAEAAGMPLKDFRRRLFHGRRAKDKM 147
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 148 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 207
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 208 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPTEEEIATRMEMTIEKLRFIAK 267
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 268 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKSLLREDLENVLDTLSPRERDVL 326
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 327 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 362
>D4TQC8_9NOST (tr|D4TQC8) RNA polymerase sigma factor OS=Raphidiopsis brookii D9
GN=CRD_00598 PE=3 SV=1
Length = 390
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++DL E+ +P F +WA + T R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVRDDLYEQLEREPEFREWAEAVKLPLPTFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE+VLDSL PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKSLLREDLERVLDSLGPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>Q59965_SYNP2 (tr|Q59965) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=sigA PE=3 SV=1
Length = 375
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E PT +WA AG+ K R+RL +G K+KM
Sbjct: 84 EEIELARKIADLLELERMREQLTEHESRVPTDKEWAEAAGMPLKDFRRRLFHGRRAKDKM 143
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 144 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 203
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE +++++L +
Sbjct: 204 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPTEEEIAERMEMTIEKLRFIAK 263
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+ RE+ V+
Sbjct: 264 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKSLLREDLENVLDTLSARERDVL 322
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 323 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 358
>D7E0K7_NOSA0 (tr|D7E0K7) RNA polymerase sigma factor OS=Nostoc azollae (strain
0708) GN=Aazo_2817 PE=3 SV=1
Length = 390
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L E+ +P F +WA + T R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVRDRLYEQLEREPQFKEWAEAVQLPLPTFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>Q017N3_OSTTA (tr|Q017N3) SigA (ISS) OS=Ostreococcus tauri GN=Ot06g01190 PE=4
SV=1
Length = 525
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 197/279 (70%), Gaps = 3/279 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGD--QPTFAQWAAVAGVDQKTLRKRLNYGIFCKE 327
+E+EL++ IQDL+ LE ++E+L E+ G + + +QWAA AG++ LR+RL+ G K
Sbjct: 220 QEVELAKRIQDLMHLESIRENLIEETGPGVELSESQWAAAAGLNVSALRQRLHDGKAAKN 279
Query: 328 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 387
+MI++N+RLV+SIAK Y M+ QDL+QEGC GL+RGAEKFD +G+KFSTYAHWWI+Q
Sbjct: 280 EMIQANLRLVVSIAKKYANTNMSFQDLIQEGCVGLIRGAEKFDFQRGYKFSTYAHWWIRQ 339
Query: 388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAV 447
AV +S+SDQSRTIRLP H+ E R+ + ++ NGR P EE+A +S+++++ +
Sbjct: 340 AVTRSISDQSRTIRLPVHLFEIISRISKMEQKFALYNGRPPTLEEIASEMEMSVEKITQI 399
Query: 448 LLTPKAPRSLEQKIGI-NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+AP SL Q +G N+ + + D AE E+ K +K+DLE VL++LNPRE+
Sbjct: 400 KKAAQAPVSLAQTMGGENKGRTIEDTLIDANAEGPEKVSGKSLLKEDLENVLNTLNPRER 459
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A
Sbjct: 460 DVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKAL 498
>A4RYI5_OSTLU (tr|A4RYI5) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_41331 PE=4 SV=1
Length = 344
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 196/279 (70%), Gaps = 3/279 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCG--DQPTFAQWAAVAGVDQKTLRKRLNYGIFCKE 327
+E+EL++ IQDL+ LE ++E+L E+ G + T QWA+ AG++ + L +RL G K
Sbjct: 34 QEVELAKRIQDLMHLESIRENLVEETGPGAEVTDYQWASAAGLNVQALHQRLRDGKSAKN 93
Query: 328 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 387
+MI++N+RLV+SIAK Y + M+ QDL+QEGC GL+RGAEKFD +G+KFSTYAHWWI+Q
Sbjct: 94 EMIQANLRLVVSIAKKYANSNMSFQDLIQEGCVGLIRGAEKFDFQRGYKFSTYAHWWIRQ 153
Query: 388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAV 447
AV +S+SDQSRTIRLP H+ E R+ + ++ NGR+P EE+A +S ++++ +
Sbjct: 154 AVTRSISDQSRTIRLPVHLFEIISRISKMEQKFALHNGRNPTTEEIAAEMDMSAEKITQI 213
Query: 448 LLTPKAPRSLEQKI-GINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+AP SL Q + G N+ + + D AE E+ K +K+DLE VL++LNPRE+
Sbjct: 214 KKAAQAPVSLAQTMGGDNKGRTVEDTLVDVTAEGPEKVSGKSLLKEDLENVLNTLNPRER 273
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A
Sbjct: 274 DVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKAL 312
>D4TFK7_9NOST (tr|D4TFK7) RNA polymerase sigma factor OS=Cylindrospermopsis
raciborskii CS-505 GN=CRC_01163 PE=3 SV=1
Length = 390
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++DL E+ +P F +WA + T R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVRDDLYEQLEREPEFREWAEAVKLPLPTFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE+VLDSL PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKSLLREDLERVLDSLGPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+D+GRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDNGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>K9ZHC6_ANACC (tr|K9ZHC6) RNA polymerase sigma factor OS=Anabaena cylindrica
(strain ATCC 27899 / PCC 7122) GN=Anacy_2718 PE=3 SV=1
Length = 392
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L ++ +P F +WA + T R RL+ G K+KM
Sbjct: 101 EEIELARKIADLLELERVRDRLQDQLEREPQFKEWAEAVELPLPTFRYRLHVGRRAKDKM 160
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 161 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 220
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 221 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 280
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 281 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 339
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 340 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 375
>K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindrospermum stagnale
PCC 7417 GN=Cylst_3438 PE=3 SV=1
Length = 390
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ P ++WAA + R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVRERLSERLERDPKDSEWAAEVQLPLPAFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>Q3MDA3_ANAVT (tr|Q3MDA3) RNA polymerase sigma factor OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=Ava_1410 PE=3 SV=1
Length = 390
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+EK P ++WA + R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVRERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>K9PJQ4_9CYAN (tr|K9PJQ4) RNA polymerase sigma factor OS=Calothrix sp. PCC 7507
GN=Cal7507_2774 PE=3 SV=1
Length = 390
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ P ++WA + R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERVREKLSEQLDRDPKDSEWAEAVQLPLPAFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>K9XY46_STAC7 (tr|K9XY46) RNA polymerase sigma factor OS=Stanieria cyanosphaera
(strain ATCC 29371 / PCC 7437) GN=Sta7437_3976 PE=3 SV=1
Length = 372
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E +A++ P+ A+WA + R+RL YG K+KM
Sbjct: 81 EEIELARKIADLLELERIRERMADRLERYPSDAEWAEEVNMRLPEFRRRLFYGRRAKDKM 140
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 141 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 200
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 201 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 260
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 261 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKSLLREDLENVLDTLSPRERDVL 319
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 320 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 355
>A0ZJC3_NODSP (tr|A0ZJC3) RNA polymerase sigma factor OS=Nodularia spumigena
CCY9414 GN=N9414_22328 PE=3 SV=1
Length = 391
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L E+ +P + +WA + R RL+ G K+KM
Sbjct: 100 EEIELARKIADLLELERVRDRLQEQLEREPEYREWAEAVQIPLPAFRYRLHIGRRAKDKM 159
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 160 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 219
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 220 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 279
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 280 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 338
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>K9TYL7_9CYAN (tr|K9TYL7) RNA polymerase sigma factor OS=Chroococcidiopsis
thermalis PCC 7203 GN=Chro_1963 PE=3 SV=1
Length = 392
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+++ +P ++WA + R RL+ G K+KM
Sbjct: 101 EEIELARKIADLLELERIREKLSDRLDREPQDSEWAEAVKQNLPAFRYRLHVGRRAKDKM 160
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 161 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 220
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 221 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 280
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 281 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 339
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 340 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 375
>K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 7428
GN=Glo7428_2515 PE=3 SV=1
Length = 390
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I +L+++E+++E L E+ +P ++WA + T R RL+ G K+KM
Sbjct: 99 EEIELARKIAELLEMERVRERLLEQLDREPQDSEWAEAVQLSLPTFRYRLHVGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKSLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>Q9L4T2_NOSP7 (tr|Q9L4T2) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=sigA PE=3 SV=1
Length = 389
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ P ++WA + R RL+ G K+KM
Sbjct: 98 EEIELARKIADLLELERVRERLSEQLDRDPRDSEWAEAVQLPLPAFRYRLHVGRRAKDKM 157
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 158 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 217
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 218 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 277
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 278 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 336
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 337 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 372
>F5UG89_9CYAN (tr|F5UG89) RNA polymerase sigma factor OS=Microcoleus vaginatus
FGP-2 GN=MicvaDRAFT_3216 PE=3 SV=1
Length = 388
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 194/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E+ +P ++WA + R RL+ G KEKM
Sbjct: 97 EEIELARKIADLLELERVREQLLEEYNREPKDSEWANAVDMALPAFRHRLHVGRRAKEKM 156
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 157 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 216
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 217 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 276
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 277 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 335
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 336 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 371
>K9Q8G4_9NOSO (tr|K9Q8G4) RNA polymerase sigma factor OS=Nostoc sp. PCC 7107
GN=Nos7107_0427 PE=3 SV=1
Length = 391
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ P ++WA + R RL+ G K+KM
Sbjct: 100 EEIELARKIADLLELERVRERLSEQLDRDPRDSEWAEAVQLPLPAFRYRLHVGRRAKDKM 159
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 160 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 219
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 220 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 279
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 280 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 338
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>K9V2E9_9CYAN (tr|K9V2E9) RNA polymerase sigma factor OS=Calothrix sp. PCC 6303
GN=Cal6303_3070 PE=3 SV=1
Length = 389
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+++ P ++WA V R RL+ G K+KM
Sbjct: 98 EEIELARKIADLLELERIREKLSQQLDRDPKDSEWAEAVQVPLPQFRYRLHIGRRAKDKM 157
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 158 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 217
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 218 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 277
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 278 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 336
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 337 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 372
>F4XPJ0_9CYAN (tr|F4XPJ0) RNA polymerase sigma factor OS=Moorea producens 3L
GN=LYNGBM3L_34960 PE=3 SV=1
Length = 373
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ +P +WA ++ R RL+ G KEKM
Sbjct: 82 EEIELARKIADLLELERVRERLSEQLEREPGDREWATEVDMELPAFRYRLHVGRRAKEKM 141
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 142 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 201
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A+ +++++L +
Sbjct: 202 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIADRMEMTIEKLRFIAK 261
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 262 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKNLLREDLESVLDTLSPRERDVL 320
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 321 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 356
>K9S7N4_9CYAN (tr|K9S7N4) RNA polymerase sigma factor OS=Geitlerinema sp. PCC
7407 GN=GEI7407_1675 PE=3 SV=1
Length = 381
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++ DLAE+ +PT A+WA + R RL+ G K+KM
Sbjct: 90 EEIELARKIADLLELERIRADLAEQLEREPTDAEWAQKVDMALPAFRHRLHLGRRAKDKM 149
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 150 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 209
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 210 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 269
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VL +L+PRE+ V+
Sbjct: 270 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLGTLSPRERDVL 328
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 329 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 364
>K9QTZ2_NOSS7 (tr|K9QTZ2) RNA polymerase sigma factor OS=Nostoc sp. (strain ATCC
29411 / PCC 7524) GN=Nos7524_2732 PE=3 SV=1
Length = 390
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L+E+ P ++WA + R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLELERIRERLSEQLERDPHDSEWAEAVQLPLPAFRYRLHLGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>M1WSP5_9NOST (tr|M1WSP5) RNA polymerase sigma factor OS=Richelia intracellularis
HH01 GN=RINTHH_14140 PE=3 SV=1
Length = 390
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+++E++++ L ++ +P +++WA + R RL+ G K+KM
Sbjct: 99 EEIELARKIADLLEMERVRDRLYDQLAREPKYSEWAEAVKIPLPQFRYRLHIGRRAKDKM 158
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 159 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 218
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 219 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 278
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 279 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKGLLREDLEKVLDSLSPRERDVL 337
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 373
>K7W4G2_9NOST (tr|K7W4G2) RNA polymerase sigma factor OS=Anabaena sp. 90 GN=sigA
PE=3 SV=1
Length = 391
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I +L++LE+ +E L E+ P ++WAA + T R RL+ G K+KM
Sbjct: 100 EEIELARKIAELLELERARERLCERLERDPRDSEWAAEVSLPLPTFRYRLHVGRRAKDKM 159
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 160 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 219
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 220 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 279
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 280 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 338
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>B4WPM0_9SYNE (tr|B4WPM0) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7335 GN=S7335_5088 PE=3 SV=1
Length = 404
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++++ ++ D+PT A WA + R+RL G K+KM
Sbjct: 113 EEIELARKIADLLELERIRDEIDDQLDDEPTDADWANAVDMPLPAFRRRLYQGRRAKDKM 172
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 173 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 232
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 233 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTEEEIATRMEMTIEKLRFIAK 292
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VL +L+PRE+ V+
Sbjct: 293 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDEVSKSLLREDLESVLSTLSPRERDVL 351
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 352 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 387
>K9VRX0_9CYAN (tr|K9VRX0) RNA polymerase sigma factor OS=Oscillatoria
nigro-viridis PCC 7112 GN=Osc7112_5754 PE=3 SV=1
Length = 388
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 194/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E+ +P ++WA + R RL+ G KEKM
Sbjct: 97 EEIELARKIADLLELERVREQLLEEYNREPKDSEWANAVEMALPAFRHRLHVGRRAKEKM 156
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 157 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 216
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 217 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 276
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 277 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 335
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 336 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 371
>G6FUP1_9CYAN (tr|G6FUP1) RNA polymerase sigma factor OS=Fischerella sp. JSC-11
GN=FJSC11DRAFT_2588 PE=3 SV=1
Length = 393
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L ++ +P +++WA + R RL+ G K+KM
Sbjct: 102 EEIELARKIADLLELERVRDRLQQQLEREPQYSEWAEAVQLPLPQFRHRLHVGRRAKDKM 161
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 162 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 221
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 222 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 281
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 282 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVL 340
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 341 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 376
>K8GQ72_9CYAN (tr|K8GQ72) RNA polymerase sigma factor OS=Oscillatoriales
cyanobacterium JSC-12 GN=OsccyDRAFT_1085 PE=3 SV=1
Length = 382
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L ++ P A+WA + R RL+ G K+KM
Sbjct: 91 EEIELARKIADLLELERIRESLQQQLDRTPQDAEWANAVNMTLPAFRHRLHLGRRAKDKM 150
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 151 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 210
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 211 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 270
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 271 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVAKNLLREDLENVLDTLSPRERDVL 329
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 330 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 365
>D8G4S3_9CYAN (tr|D8G4S3) RNA polymerase sigma factor OS=Oscillatoria sp. PCC
6506 GN=OSCI_3480020 PE=3 SV=1
Length = 391
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E+ P +WA G+ R RL+ G K+KM
Sbjct: 100 EEIELARKIADLLELERIREQLCEELERDPKDNEWANAVGMPLPAFRHRLHLGRRAKDKM 159
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 160 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 219
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 220 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 279
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 280 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 338
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>K9R7S3_9CYAN (tr|K9R7S3) RNA polymerase sigma factor OS=Rivularia sp. PCC 7116
GN=Riv7116_1014 PE=3 SV=1
Length = 389
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++ + L ++ QP ++WA + + R RL+ G K+KM
Sbjct: 98 EEIELARKIADLLELERVGDRLVQQLERQPQESEWAEAVQLPLQKFRYRLHVGRRAKDKM 157
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 158 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 217
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 218 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 277
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLDSL+PRE+ V+
Sbjct: 278 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKSLLREDLEKVLDSLSPRERDVL 336
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 337 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 372
>K9TM07_9CYAN (tr|K9TM07) RNA polymerase sigma factor OS=Oscillatoria acuminata
PCC 6304 GN=Oscil6304_3894 PE=3 SV=1
Length = 387
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L + +P A+WA + R RL+ G K+KM
Sbjct: 96 EEIELARKIADLLELERIREHLCDHLHREPYDAEWADAVKMSVGQFRHRLHCGRRAKDKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>K9UM88_9CHRO (tr|K9UM88) RNA polymerase sigma factor OS=Chamaesiphon minutus PCC
6605 GN=Cha6605_4648 PE=3 SV=1
Length = 380
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L +P +WAAVA + R RL G K+KM
Sbjct: 89 EEIELARKIADLLELERMREKLLNDLDREPHDREWAAVASMPLNQFRHRLFLGRRAKDKM 148
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 149 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 208
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 209 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 268
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 269 SAQLPISLETPIGKEEDSRLGDFI-EADGEMPEDQVSKSLLREDLEGVLDTLSPRERDVL 327
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 328 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 363
>Q10UV2_TRIEI (tr|Q10UV2) RNA polymerase sigma factor OS=Trichodesmium erythraeum
(strain IMS101) GN=Tery_5068 PE=3 SV=1
Length = 386
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E+L +P ++WA ++ ++RL G KEKM
Sbjct: 95 EEIELARKIADLLELERIREELIYHLDREPQVSEWANAVDMELPKFKRRLILGRRAKEKM 154
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 155 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 214
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A + +++++L +
Sbjct: 215 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATSMEMTIEKLRFIAK 274
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VL+SL+PRE+ V+
Sbjct: 275 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDEVSKNLLREDLESVLNSLSPRERDVL 333
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 334 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 369
>K9WH45_9CYAN (tr|K9WH45) RNA polymerase sigma factor OS=Microcoleus sp. PCC 7113
GN=Mic7113_4030 PE=3 SV=1
Length = 373
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L+++ +P ++WA + + R RL G K+KM
Sbjct: 82 EEIELARKIADLLELERIRDRLSDQLEREPQDSEWATEVNMPLQAFRHRLYVGRRAKDKM 141
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 142 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 201
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A+ +++++L +
Sbjct: 202 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIADRMEMTIEKLRFIAK 261
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 262 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKNLLREDLESVLDTLSPRERDVL 320
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 321 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 356
>K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothece sp. (strain
PCC 7418) GN=PCC7418_3695 PE=3 SV=1
Length = 394
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 194/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+ + +L G +PT +WA + + R+RL G KEKM
Sbjct: 102 EEIELARKIADLLELERKRTELEATIGCEPTDEEWAEEVDMPLQKFRRRLMLGRRAKEKM 161
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 162 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 221
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE +++++L +
Sbjct: 222 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTEEEIAERMEMTIEKLRFIAK 281
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 282 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKSLLREDLEDVLDTLSPRERDVL 340
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 341 RLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKAL 376
>K9Z8E6_CYAAP (tr|K9Z8E6) RNA polymerase sigma factor OS=Cyanobacterium aponinum
(strain PCC 10605) GN=Cyan10605_3382 PE=3 SV=1
Length = 386
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 194/277 (70%), Gaps = 2/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEIEL+ I DL+ LE ++ L E G PT +WA + + + + +RL+ G K+K
Sbjct: 94 EEIELARQIADLLDLEYIRSTLIEHLGRVPTDEEWAIASDMPNMRQFNRRLHIGRKAKDK 153
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA
Sbjct: 154 MVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQA 213
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
+ ++++DQSRTIRLP H+ E R+K+ K L + GR P +EE+AE +++++L +
Sbjct: 214 ITRAIADQSRTIRLPVHLYETISRIKKTTKMLSQKMGRKPTEEEIAEDMEMTIEKLRFIA 273
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLDSL+PRE+ V
Sbjct: 274 KSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDSLSPRERDV 332
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 333 LRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 369
>B0CDC4_ACAM1 (tr|B0CDC4) RNA polymerase sigma factor OS=Acaryochloris marina
(strain MBIC 11017) GN=rpoD PE=3 SV=1
Length = 371
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++ +DL ++ +P +WA + R RL+ G K+KM
Sbjct: 80 EEIELARKIADLLELERIYDDLFDRLEREPQLQEWALEVDMPLNRFRHRLHAGRRAKDKM 139
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 140 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 199
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 200 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 259
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 260 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKSLLREDLETVLDTLSPRERDVL 318
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 319 KLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 354
>A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya sp. (strain PCC
8106) GN=L8106_10432 PE=3 SV=1
Length = 391
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA+ + R+RL G K+KM
Sbjct: 100 EEIELARRIADLLELERIREKLVEHNHCEPEDREWASAVDMALPEFRRRLYLGRRAKDKM 159
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 160 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 219
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 220 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 279
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 280 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 338
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>B4W0Y8_9CYAN (tr|B4W0Y8) RNA polymerase sigma factor OS=Coleofasciculus
chthonoplastes PCC 7420 GN=MC7420_8305 PE=3 SV=1
Length = 380
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++ L ++ +P +WA ++ R+RL G KEKM
Sbjct: 89 EEIELARKIADLLELERIRDRLYDQLEREPKEGEWAKEVEMELPAFRQRLFLGRRAKEKM 148
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 149 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 208
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A+ +++++L +
Sbjct: 209 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPTEEEIADRMEMTIEKLRFIAK 268
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 269 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKNLLREDLESVLDTLSPRERDVL 327
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 328 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 363
>L8L5U0_9SYNC (tr|L8L5U0) RNA polymerase sigma factor OS=Synechocystis sp. PCC
7509 GN=Syn7509DRAFT_00044800 PE=3 SV=1
Length = 386
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 194/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I +L+++E+++E L ++ P ++WA + + R RL+ G K+KM
Sbjct: 95 EEIELARKIAELLQMERVREQLCDRLDRDPHDSEWAEAVELPINSFRYRLHVGRRAKDKM 154
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 155 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 214
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 215 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 274
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLEKVLD L+PRE+ V+
Sbjct: 275 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLEKVLDGLSPRERDVL 333
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 334 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 369
>A2C7M0_PROM3 (tr|A2C7M0) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9303) GN=P9303_07291 PE=3 SV=1
Length = 444
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L E G P +WAA+ + R+RL G KEKM
Sbjct: 153 EEIELARKIADLLHLEELAEQFNSDHGHYPNNKEWAALVEMPNIKFRRRLMLGRRAKEKM 212
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 213 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 272
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 273 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 332
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 333 SAQLPISLETPIGKEEDSRLGDFI-ESDTENPEQDVAKNLLREDLEGVLATLSPRERDVL 391
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 392 RLRYGLDDGRMKTLEEIGQIFEVTRERIRQIEAKAL 427
>Q7V698_PROMM (tr|Q7V698) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9313) GN=sigA PE=3 SV=1
Length = 461
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L E G P +WA++ + R+RL G KEKM
Sbjct: 170 EEIELARKIADLLHLEELAEQFNSDHGHYPNNKEWASLVEMPNIKFRRRLMLGRRAKEKM 229
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 230 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 289
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 290 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 349
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 350 SAQLPISLETPIGKEEDSRLGDFI-ESDTENPEQDVAKNLLREDLEGVLATLSPRERDVL 408
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 409 RLRYGLDDGRMKTLEEIGQIFEVTRERIRQIEAKAL 444
>C1MUC7_MICPC (tr|C1MUC7) Predicted protein OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_47508 PE=4 SV=1
Length = 587
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 191/281 (67%), Gaps = 5/281 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQ-----WAAVAGVDQKTLRKRLNYGIF 324
+E+EL+ IQDL+ LE ++E L E+ + ++ WA A V ++ L++RL+ G
Sbjct: 273 QEVELAMRIQDLVYLEGVREQLEEEAKRRKQTSEVSNFDWAIAANVTERELKERLDAGKR 332
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K +MI++N+RLV+SIAK Y M+ QDL+QEGC GL+RGAEKFD +G+KFSTYAHWW
Sbjct: 333 AKNQMIQANLRLVVSIAKRYANKSMSFQDLIQEGCVGLIRGAEKFDFKRGYKFSTYAHWW 392
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QAV +S+SDQSRTIRLP H+ E R+ + +QL + GR P EE+AE ++++++
Sbjct: 393 IRQAVTRSISDQSRTIRLPVHLFEIISRMSKVERQLVMKYGRDPTTEEIAEVMDMTVEKI 452
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + P SL Q + + + E + D AE ++ K +K+DLE VL++L+PR
Sbjct: 453 NQIQKASLVPISLSQSVNDDDSRTVEETLVDDHAEHPDDATGKVLLKEDLENVLNTLSPR 512
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+GMDDGR+KTL+EIG + V+RERIRQIE+ A
Sbjct: 513 ERDVLRLRYGMDDGRVKTLEEIGNVFSVTRERIRQIEAKAL 553
>A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_178031 PE=4 SV=1
Length = 583
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 192/296 (64%)
Query: 250 SDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAG 309
SDP EE+ LS IQD++KLEK++ +L G +PT ++W+
Sbjct: 268 SDPIRSYLRDIKRTKLLSASEEVALSRKIQDILKLEKIRAELQRDIGREPTLSEWSQAVS 327
Query: 310 VDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 369
+DQ +L R+ G K+K++ SN+RLV+SI KNYQG GM L DL+QEG GL+RGAEKF
Sbjct: 328 LDQTSLELRVKEGRSAKDKLVNSNLRLVVSIVKNYQGRGMTLPDLIQEGSLGLIRGAEKF 387
Query: 370 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD 429
D G+KFSTYA WWI+QAV ++++DQSR IRLP H+ E R+ +A+ + E GR P
Sbjct: 388 DPEMGYKFSTYATWWIRQAVTRAIADQSRIIRLPVHIYEVISRINKAKMTISQELGRQPR 447
Query: 430 DEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQF 489
DEEVA G+S+++L ++ + + P S+++ IG + E++AD + E+ ++ Q
Sbjct: 448 DEEVAAMVGMSVEKLLFIVKSARPPTSMDRPIGKDGEQSLGEMVADKGVGSPEDDIMTQV 507
Query: 490 MKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+K+D+E VL SLNP E++V+R RFG+ + TL+++G + V+RERIRQIE+ A
Sbjct: 508 LKQDIEDVLRSLNPMEREVLRLRFGLSGAQSMTLKDLGIIFKVTRERIRQIEAKAL 563
>A9RG56_PHYPA (tr|A9RG56) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_113461 PE=4 SV=1
Length = 581
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 217/362 (59%), Gaps = 23/362 (6%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVD-------YSDP 252
S ++ +S+R+ ER KR RA EKA V+F S+ PV + D SDP
Sbjct: 207 SRNVAVKSNRKNERFRKRERALEKAGK--VAFALASSP-----PVPKADKSLIKHRLSDP 259
Query: 253 XXXXXXXXXXXXXXXXXEEIELSEGIQ---------DLIKLEKLQEDLAEKCGDQPTFAQ 303
EE+ LS IQ +KLEK++ +L G +PT ++
Sbjct: 260 ICSYLRDVKNSKLLTAFEEVALSRKIQVTTLFRFRQYTLKLEKVRAELQRDMGREPTRSE 319
Query: 304 WAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 363
W+ G++Q R+ G K+K++ SN+RLV+SI KNYQG GM L DL+Q G GL+
Sbjct: 320 WSLAVGMNQTLFELRIKEGQCAKDKLVNSNLRLVVSIVKNYQGRGMTLPDLIQRGSLGLI 379
Query: 364 RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 423
RGAEKFD GFKFSTYA WWI+QAV +S++DQSR IRLP H+ E R+ ++R + +
Sbjct: 380 RGAEKFDPEMGFKFSTYATWWIRQAVTRSITDQSRIIRLPVHIYEVISRINKSRMMIAED 439
Query: 424 NGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEE 483
GR DEEVA A G+S+++L +L + + P S++Q IG +++L E++AD +A++
Sbjct: 440 QGRQARDEEVATAVGISVEKLDFILKSARLPASMDQLIGRDKDLPLWEMVADKGFNSADD 499
Query: 484 QLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESC 543
L + +K+D++ VL +L+P E++V+R RFG+DD + TL++IG V+RERIRQIE
Sbjct: 500 FLTNEVLKQDIDGVLQTLSPTEREVLRLRFGLDDAQSMTLKDIGIFFKVTRERIRQIEVR 559
Query: 544 AF 545
A
Sbjct: 560 AL 561
>E0UHZ3_CYAP2 (tr|E0UHZ3) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7822) GN=Cyan7822_2551 PE=3 SV=1
Length = 377
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L+E L G P+ +WA G++ ++RL G K+KM
Sbjct: 86 EEIELARKIADLLELERLREKLRRNLGRYPSDKEWAQQVGMELPAFQRRLYLGRRAKDKM 145
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 146 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 205
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+A +++++L +
Sbjct: 206 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAK 265
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 266 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVL 324
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 325 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 360
>B7KDV7_CYAP7 (tr|B7KDV7) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7424) GN=PCC7424_1979 PE=3 SV=1
Length = 376
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L+E L G P+ +WA G++ ++RL G K+KM
Sbjct: 85 EEIELARKIADLLELERLREKLRRSLGRYPSDKEWAEQVGMELPAFQRRLYLGRRAKDKM 144
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 145 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 204
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+A +++++L +
Sbjct: 205 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAK 264
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 265 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVL 323
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 324 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 359
>K9YJV2_CYASC (tr|K9YJV2) RNA polymerase sigma factor OS=Cyanobacterium stanieri
(strain ATCC 29140 / PCC 7202) GN=Cyast_1251 PE=3 SV=1
Length = 391
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 192/277 (69%), Gaps = 2/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEIEL+ I DL+ LE ++ E G PT +WA + + + +RL+ G K+K
Sbjct: 99 EEIELARQIADLLDLEYIRATQIEHLGRIPTDEEWAIACDIPNMRQFNRRLHIGRRAKDK 158
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA
Sbjct: 159 MVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQA 218
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
+ ++++DQSRTIRLP H+ E R+K+ K L + GR P +EE+AE +++++L +
Sbjct: 219 ITRAIADQSRTIRLPVHLYETISRIKKTTKMLSQKMGRKPTEEEIAEDMEMTIEKLRFIA 278
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLDSL+PRE+ V
Sbjct: 279 KSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDSLSPRERDV 337
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 LRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 374
>L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 73106
GN=GLO73106DRAFT_00034750 PE=3 SV=1
Length = 376
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+ +E L ++ P +WAA ++ R+RL G KEKM
Sbjct: 85 EEIELARKIADLLELEQKREKLWQELKRIPNDREWAASVEMELPAFRRRLYLGRRAKEKM 144
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 145 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 204
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 205 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIATHMEMTIEKLRFIAK 264
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+ + K +++DLE VLDSL+PRE+ V+
Sbjct: 265 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDDVSKNLLREDLEHVLDSLSPRERDVL 323
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 324 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 359
>B5ILG7_9CHRO (tr|B5ILG7) RNA polymerase sigma factor OS=Cyanobium sp. PCC 7001
GN=rpoD_2 PE=3 SV=1
Length = 503
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L G P +WAA+ + R+RL G KEKM
Sbjct: 212 EEIELARKIADLLQLEELAAQFEADHGHYPDNKEWAALVDMPLIKFRRRLMLGRRAKEKM 271
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 272 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 331
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 332 TRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 391
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 392 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 450
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 451 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 486
>B8HPM3_CYAP4 (tr|B8HPM3) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=Cyan7425_1514 PE=3 SV=1
Length = 378
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 194/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L +K +P +WA + ++ R RL+ G K+KM
Sbjct: 87 EEIELARKIADLLELERIREQLYDKLDREPQDQEWAGEVDMPLQSFRHRLHIGRRAKDKM 146
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 147 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 206
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 207 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 266
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VL +L+PRE+ V+
Sbjct: 267 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLETVLCTLSPRERDVL 325
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 326 KLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKAL 361
>G4FIM1_9SYNE (tr|G4FIM1) RNA polymerase sigma factor OS=Synechococcus sp. WH
8016 GN=Syn8016DRAFT_1273 PE=3 SV=1
Length = 443
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G P +WAA+ + R+RL G KEKM
Sbjct: 152 EEIELARKIADLLHLEELAAQFESDNGKLPDTKEWAALVEMPVIRFRRRLMLGRRAKEKM 211
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 212 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 271
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 272 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 331
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 332 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 390
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 391 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 426
>A4CRY9_SYNPV (tr|A4CRY9) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH7805) GN=WH7805_13938 PE=3 SV=1
Length = 447
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G P +WAA+ + R+RL G KEKM
Sbjct: 156 EEIELARKIADLLHLEELAAQFESDNGKLPDTKEWAALVEMPVIRFRRRLMLGRRAKEKM 215
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 216 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 275
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 276 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 335
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 336 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 394
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 395 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 430
>C6JRK5_SORBI (tr|C6JRK5) Putative uncharacterized protein Sb0010s016080
OS=Sorghum bicolor GN=Sb0010s016080 PE=4 SV=1
Length = 238
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 173/234 (73%), Gaps = 1/234 (0%)
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M+ SN+RLVISIA+ ++G GM+L DL+QEG +GL+RGAEKFDASKGF+FSTY+HWWIKQA
Sbjct: 1 MVTSNVRLVISIAREFEGPGMDLYDLIQEGMQGLIRGAEKFDASKGFRFSTYSHWWIKQA 60
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
+RKS+S+QS+ RLP HMVEA+YRVKE K+L + R P +EE+A TG+ +KR+ A +
Sbjct: 61 MRKSVSEQSQIFRLPAHMVEASYRVKECTKRLRRKLRRRPTNEEIALDTGMPIKRVEAAV 120
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
PK SL+ KIG + ++ EV ADP AETAEE L + MKKD+ K LD+L REKQV
Sbjct: 121 NLPKYSVSLDSKIG-STDMTYQEVTADPSAETAEEMLNRMSMKKDVHKALDTLTTREKQV 179
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLV 562
+ RFG++D R++TLQEIG ++GVSRERIRQIES AF YLV
Sbjct: 180 VVLRFGLEDDRIRTLQEIGNIMGVSRERIRQIESGAFRKLRSKKRVKALKDYLV 233
>Q7U5C4_SYNPX (tr|Q7U5C4) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH8102) GN=sigA PE=3 SV=1
Length = 471
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 180 EEIELARKIADLLHLEELAAQFESDNGREPDKKEWAALVEMPLIRFRRRLMLGRRAKEKM 239
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 240 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 299
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 300 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 359
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 360 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 418
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 419 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 454
>K9T849_9CYAN (tr|K9T849) RNA polymerase sigma factor OS=Pleurocapsa sp. PCC 7327
GN=Ple7327_3395 PE=3 SV=1
Length = 374
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++ E L ++ G P +WA ++ ++RL G K+KM
Sbjct: 83 EEIELARKIADLLELERIYEQLRKRLGRFPNNREWAEAVEMELPAFQRRLYLGRRAKDKM 142
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 143 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 202
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+A +++++L +
Sbjct: 203 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAK 262
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 263 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVL 321
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 322 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 357
>K9W354_9CYAN (tr|K9W354) RNA polymerase sigma factor OS=Crinalium epipsammum PCC
9333 GN=Cri9333_3816 PE=3 SV=1
Length = 383
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 191/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I +L++LE++ E L + +P ++WA + R RL G K+KM
Sbjct: 92 EEIELARKIAELLQLERVYEQLKAQLDREPKDSEWALAVEMPLPQFRHRLYLGRRAKDKM 151
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 152 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 211
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 212 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 271
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 272 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLESVLDTLSPRERDVL 330
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 331 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 366
>Q05YJ7_9SYNE (tr|Q05YJ7) RNA polymerase sigma factor OS=Synechococcus sp. BL107
GN=BL107_10222 PE=3 SV=1
Length = 451
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 160 EEIELARKIADLLYLEELAAQFESDNGREPDKKEWAALVEMPLIRFRRRLMLGRRAKEKM 219
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 220 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 279
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 280 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 339
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 340 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 398
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 399 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 434
>Q3AWQ6_SYNS9 (tr|Q3AWQ6) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9902) GN=Syncc9902_1678 PE=3 SV=1
Length = 451
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 160 EEIELARKIADLLYLEELAAQFESDNGREPDKKEWAALVEMPLIRFRRRLMLGRRAKEKM 219
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 220 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 279
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 280 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 339
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 340 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 398
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 399 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 434
>C7QR23_CYAP0 (tr|C7QR23) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8802) GN=Cyan8802_0150 PE=3 SV=1
Length = 379
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 191/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E + E G PT +W+ ++ ++RL G K+KM
Sbjct: 88 EEIELARKIADLLELERIREKMTEHMGRFPTDLEWSQAINMEWHAFQRRLYLGRKAKDKM 147
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 148 VHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 207
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+A +++++L +
Sbjct: 208 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAK 267
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 268 SAQLPISLETPIGKEEDSRLGDFI-EADGENPEDEVSKNLLREDLENVLDTLSPRERDVL 326
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 327 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 362
>B7K1V2_CYAP8 (tr|B7K1V2) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8801) GN=PCC8801_0154 PE=3 SV=1
Length = 379
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 191/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E + E G PT +W+ ++ ++RL G K+KM
Sbjct: 88 EEIELARKIADLLELERIREKMTEHMGRFPTDLEWSQAINMEWHAFQRRLYLGRKAKDKM 147
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 148 VHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 207
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+A +++++L +
Sbjct: 208 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAK 267
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 268 SAQLPISLETPIGKEEDSRLGDFI-EADGENPEDEVSKNLLREDLENVLDTLSPRERDVL 326
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 327 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 362
>A5GJC2_SYNPW (tr|A5GJC2) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH7803) GN=rpoD PE=3 SV=1
Length = 450
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G P +WAA+ + R+RL G KEKM
Sbjct: 159 EEIELARKIADLLHLEELAAQFESDNGKLPDTKEWAALVEMPVIRFRRRLMLGRRAKEKM 218
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 219 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 278
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 279 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 338
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 339 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 397
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 398 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 433
>D0CLH5_9SYNE (tr|D0CLH5) RNA polymerase sigma factor OS=Synechococcus sp. WH
8109 GN=SH8109_2432 PE=3 SV=1
Length = 458
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 167 EEIELARKIADLLYLEELAAQFESDNGREPDNKEWAALVEMPLIRFRRRLMLGRRAKEKM 226
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 227 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 286
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 287 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 346
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 347 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 405
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 406 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 441
>A5GSD3_SYNR3 (tr|A5GSD3) RNA polymerase sigma factor OS=Synechococcus sp.
(strain RCC307) GN=rpoD PE=3 SV=1
Length = 401
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L + E G P +WA + + R+RL G KEKM
Sbjct: 110 EEIELARKIADLLHLEELADQYEEDHGKYPDNREWAVLVDMPPIKFRRRLMLGRRAKEKM 169
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 170 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 229
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 230 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 289
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E ++ + K +++DLE VL +L+PRE+ V+
Sbjct: 290 SAQLPISLETPIGKEEDSRLGDFI-EADIENPDQDVAKNLLREDLEGVLATLSPRERDVL 348
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 349 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 384
>A2C0V5_PROM1 (tr|A2C0V5) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain NATL1A) GN=NATL1_05531 PE=3 SV=1
Length = 420
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+ + G P+ +WA +A + R+RL G KEKM
Sbjct: 127 EEIELARKIADLLQLEEEAAQFESENGHFPSVKEWAVLADMPLTRFRRRLMLGRRAKEKM 186
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 187 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 246
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 247 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 306
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 307 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKTLLREDLEGVLATLSPRERDVL 365
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 366 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 401
>Q46GS6_PROMT (tr|Q46GS6) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain NATL2A) GN=PMN2A_1829 PE=3 SV=1
Length = 420
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+ + G P+ +WA +A + R+RL G KEKM
Sbjct: 127 EEIELARKIADLLQLEEEAAQFESENGHFPSVKEWAVLADMPLARFRRRLMLGRRAKEKM 186
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 187 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 246
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 247 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 306
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 307 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKTLLREDLEGVLATLSPRERDVL 365
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 366 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 401
>Q3ALS7_SYNSC (tr|Q3ALS7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9605) GN=Syncc9605_0681 PE=3 SV=1
Length = 435
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 144 EEIELARKIADLLYLEELAAQFESDNGREPDNKEWAALVEMPLIRFRRRLMLGRRAKEKM 203
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 204 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 263
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 264 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 323
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 324 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 382
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 383 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 418
>Q0I8I7_SYNS3 (tr|Q0I8I7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9311) GN=rpoD PE=3 SV=1
Length = 440
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G P +WAA+ + R+RL G KEKM
Sbjct: 149 EEIELARKIADLLHLEELAAQFESDNGKLPETKEWAALVEMPVIRFRRRLMLGRRAKEKM 208
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 209 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 268
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 269 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 328
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 329 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 387
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 388 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 423
>B1X5Q2_PAUCH (tr|B1X5Q2) RNA polymerase sigma factor OS=Paulinella chromatophora
GN=rpoDI PE=4 SV=1
Length = 460
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L + G P +WAA+ + R+RL G K KM
Sbjct: 169 EEIELARKISDLLYLEELAGQFEGRKGYYPDNKEWAALVEMSLIKFRRRLMLGRRAKAKM 228
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 229 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 288
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 289 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 348
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 349 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 407
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 408 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 443
>L8LB48_9CYAN (tr|L8LB48) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
6406 GN=Lep6406DRAFT_00037560 PE=3 SV=1
Length = 372
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 191/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++ + LAE P A+WA + ++RL+ G K+KM
Sbjct: 81 EEIELARKIADLLELERVYDQLAETLQRDPQDAEWAEAVDMPLPKFQRRLHIGRRAKDKM 140
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 141 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 200
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 201 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 260
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VL +L+ RE+ V+
Sbjct: 261 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDEVSKSLLREDLESVLGTLSARERDVL 319
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 320 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 355
>A9BEB7_PROM4 (tr|A9BEB7) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9211) GN=P9211_04961 PE=3 SV=1
Length = 425
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE++ + G P+ +WAA+ + R+RL G KEKM
Sbjct: 134 EEIELARKIADLLNLEEIAIQFESENGHYPSKKEWAALVEMPVIRFRRRLMLGRRAKEKM 193
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 194 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 253
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 254 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 313
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + ++E E + K +++DLE VL +L+PRE+ V+
Sbjct: 314 SAQLPISLETPIGKEEDSRLGDFI-ESDSENPELDVAKTLLREDLEGVLATLSPRERDVL 372
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 373 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 408
>K9EXS2_9CYAN (tr|K9EXS2) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7375 GN=Lepto7375DRAFT_3552 PE=3 SV=1
Length = 376
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE++++DL++ +P A WAA + R+RL+ G K+KM
Sbjct: 85 EEIELARKIADLLELERIRDDLSDGMDHEPDDADWAAAVDMPLPAFRRRLHLGRRAKDKM 144
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 145 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 204
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 205 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTEEEIATRMEMTIEKLRFIAK 264
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VL +L+PRE+ V+
Sbjct: 265 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDEVSKSLLREDLEGVLSTLSPRERDVL 323
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 324 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 359
>K9SJF8_9CYAN (tr|K9SJF8) RNA polymerase sigma factor OS=Pseudanabaena sp. PCC
7367 GN=Pse7367_1641 PE=3 SV=1
Length = 412
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 194/280 (69%), Gaps = 5/280 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCG-DQP---TFAQWAAVAGVDQKTLRKRLNYGIFC 325
EEIEL+ I DL++LE+ +E+LA + G D P + + WA + R+RL G
Sbjct: 117 EEIELARKIADLLELEQQREELANEMGLDDPEEVSDSDWAVKVDMPLPRFRRRLYEGRRA 176
Query: 326 KEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 385
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI
Sbjct: 177 KDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWI 236
Query: 386 KQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLS 445
+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L
Sbjct: 237 RQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLR 296
Query: 446 AVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ + + P SLE IG ++ + + I + + ET ++Q+ K +++DLE VL +L+PRE
Sbjct: 297 FIAKSAQLPISLETPIGKEEDSRLGDFI-ESDGETPDDQVAKNLLREDLENVLGTLSPRE 355
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 356 RDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 395
>K9P2V4_CYAGP (tr|K9P2V4) RNA polymerase sigma factor OS=Cyanobium gracile
(strain ATCC 27147 / PCC 6307) GN=Cyagr_0083 PE=3 SV=1
Length = 432
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+ + G P +WAA+ + R+RL G KEKM
Sbjct: 141 EEIELARKIADLLELEEKAAEFEADKGHFPDTKEWAAIFDMPLIKFRRRLMLGRRAKEKM 200
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+ SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 201 VLSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 260
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 261 TRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 320
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 321 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 379
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 380 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 415
>Q5N3Q1_SYNP6 (tr|Q5N3Q1) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpoD1
PE=3 SV=1
Length = 399
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+++++L E+ P+ A+WAA R+RL G K+KM
Sbjct: 108 EEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKM 167
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 168 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 227
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 228 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 287
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VL +L+PRE+ V+
Sbjct: 288 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVAKNLLREDLEGVLSTLSPRERDVL 346
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 347 RLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKAL 382
>K6DHZ3_SPIPL (tr|K6DHZ3) RNA polymerase sigma factor OS=Arthrospira platensis
str. Paraca GN=APPUASWS_21888 PE=3 SV=1
Length = 387
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA + R+RL G K+KM
Sbjct: 96 EEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>D5A0H0_SPIPL (tr|D5A0H0) RNA polymerase sigma factor OS=Arthrospira platensis
NIES-39 GN=sigA PE=3 SV=1
Length = 387
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA + R+RL G K+KM
Sbjct: 96 EEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>H1WE70_9CYAN (tr|H1WE70) RNA polymerase sigma factor OS=Arthrospira sp. PCC 8005
GN=rpoD PE=3 SV=1
Length = 387
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA + R+RL G K+KM
Sbjct: 96 EEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>B5VWQ7_SPIMA (tr|B5VWQ7) RNA polymerase sigma factor OS=Arthrospira maxima
CS-328 GN=AmaxDRAFT_0949 PE=3 SV=1
Length = 387
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA + R+RL G K+KM
Sbjct: 96 EEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>K1X4L7_SPIPL (tr|K1X4L7) RNA polymerase sigma factor OS=Arthrospira platensis C1
GN=SPLC1_S360460 PE=3 SV=1
Length = 372
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E L E +P +WA + R+RL G K+KM
Sbjct: 81 EEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKM 140
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 141 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 200
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L +
Sbjct: 201 TRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAK 260
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 261 SAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVL 319
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 320 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 355
>Q7NHG5_GLOVI (tr|Q7NHG5) RNA polymerase sigma factor OS=Gloeobacter violaceus
(strain PCC 7421) GN=sigA PE=3 SV=1
Length = 400
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 196/305 (64%), Gaps = 30/305 (9%)
Query: 270 EEIELSEGIQDLIKLEKL-----------QEDLAEK-------------CGDQPT----- 300
EEIEL+ I DL+ LE+L D+A+ GDQ T
Sbjct: 80 EEIELARQIADLLTLERLRARMGAAGTDMHSDVADLLGDDDLLTENLLASGDQVTESEQE 139
Query: 301 FAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 360
+WA AG+ + R R+ YG K+KM++SN+RLV+SIAK Y G++ QDL+QEG
Sbjct: 140 LRRWAEAAGIAYEQFRDRIAYGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSL 199
Query: 361 GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 420
GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L
Sbjct: 200 GLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLL 259
Query: 421 YSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAET 480
E GR P +EE+A +++++L + + + P SLE IG ++ + + I + + ET
Sbjct: 260 SQELGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGET 318
Query: 481 AEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQI 540
E+++ K +++DLE VL++L+PRE+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQI
Sbjct: 319 PEDKVAKNLLREDLEAVLNTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQI 378
Query: 541 ESCAF 545
E+ A
Sbjct: 379 EAKAL 383
>L8M7W7_9CYAN (tr|L8M7W7) RNA polymerase sigma factor OS=Xenococcus sp. PCC 7305
GN=Xen7305DRAFT_00040560 PE=3 SV=1
Length = 380
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+++E + ++ + + A+W ++ + R+RL G K+KM
Sbjct: 89 EEIELARKIADLLELERIRERIEDELDREISDAEWGKEVDMELRPFRRRLFLGRRAKDKM 148
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 149 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 208
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE +++++L +
Sbjct: 209 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIAERMEMTIEKLRFIAK 268
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VLD+L+PRE+ V+
Sbjct: 269 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDQVSKSLLREDLENVLDTLSPRERDVL 327
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 328 RLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 363
>K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27167 / PCC 6312) GN=Syn6312_1261 PE=3 SV=1
Length = 382
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 193/281 (68%), Gaps = 6/281 (2%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQ-----WAAVAGVDQKTLRKRLNYGIF 324
EEIEL+ I DL++LE++++ ++E+ P + WA+ + R RL G
Sbjct: 86 EEIELARKIADLLELERIRDRISEQLDCDPDDLERHPEPWASEVKMTLPAFRHRLFVGRR 145
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
KEKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 146 AKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 205
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE +++++L
Sbjct: 206 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIAERMEMTIEKL 265
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VL +L+PR
Sbjct: 266 RFIAKSAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKHLLREDLETVLCTLSPR 324
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 325 ERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 365
>Q7VD88_PROMA (tr|Q7VD88) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=rpoD PE=3 SV=1
Length = 438
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L + G+ PT +WAA+ + R+RL KEKM
Sbjct: 147 EEIELARKIADLLHLEELAIQFESEHGNYPTKKEWAALVNMPMARFRRRLMLARRAKEKM 206
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 207 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 266
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 267 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 326
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + ++E E + K +++DLE VL +L+PRE+ V+
Sbjct: 327 SAQLPISLETPIGKEEDSRLGDFI-ESDSENPELDVAKTLLREDLEGVLATLSPRERDVL 385
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 386 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 421
>K9SYS4_9SYNE (tr|K9SYS4) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7502 GN=Syn7502_03470 PE=3 SV=1
Length = 393
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 190/279 (68%), Gaps = 4/279 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEK--CG-DQPTFAQWAAVAGVDQKTLRKRLNYGIFCK 326
EEIEL+ I DL++LE Q +LAE+ C + WA + + RL+ G K
Sbjct: 99 EEIELARKIADLLQLEDKQRELAEQHDCDLEDVNLEDWAVEMDMPLDKFKNRLHSGRRAK 158
Query: 327 EKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 386
+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+
Sbjct: 159 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 218
Query: 387 QAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSA 446
QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L
Sbjct: 219 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPSEEEIATRMEMTIEKLRF 278
Query: 447 VLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+ + + P SLE IG ++ + + I + + ET ++Q+ K +++DLE VL +L+PRE+
Sbjct: 279 IAKSAQLPISLETPIGKEEDSRLGDFI-ESDGETPDDQVAKNLLREDLESVLGTLSPRER 337
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 338 DVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 376
>K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactylococcopsis salina
PCC 8305 GN=Dacsa_0937 PE=3 SV=1
Length = 388
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 191/276 (69%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL +LE+ + +L G +PT +WA G R+RL G KEKM
Sbjct: 96 EEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVGQALPKFRRRLLLGRRAKEKM 155
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 156 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 215
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L +
Sbjct: 216 TRAIADQSRTIRLPVHLYETISRIKKTTKILSQELARKPTEEEIAERMEMTIEKLRFIAK 275
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+
Sbjct: 276 SAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKSLLREDLEDVLDTLSPRERDVL 334
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 335 RLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKAL 370
>Q8DL79_THEEB (tr|Q8DL79) RNA polymerase sigma factor OS=Thermosynechococcus
elongatus (strain BP-1) GN=sigA PE=3 SV=1
Length = 418
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 192/281 (68%), Gaps = 6/281 (2%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQ-----WAAVAGVDQKTLRKRLNYGIF 324
EEIEL+ I DL+++E++++ L ++ G + WA G+ R RL G
Sbjct: 122 EEIELARKIADLLEMERVRDRLCQELGCTAEELERNPEPWAKELGMTVPAFRHRLFVGRK 181
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
KEKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 182 AKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 241
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A+ +++++L
Sbjct: 242 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIADRMEMTIEKL 301
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+Q+ K +++DLE VL +L+PR
Sbjct: 302 RFIAKSAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDQVSKHLLREDLETVLCTLSPR 360
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 361 ERDVLKLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKAL 401
>A3Z5L5_9SYNE (tr|A3Z5L5) RNA polymerase sigma factor OS=Synechococcus sp. RS9917
GN=RS9917_09721 PE=3 SV=1
Length = 456
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 165 EEIELARKIADLLLLEELAAQFESDNGREPDTKEWAALVEMPVIKFRRRLMLGRRAKEKM 224
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 225 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 284
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 285 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 344
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 345 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 403
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 404 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 439
>K8F5W9_9CHLO (tr|K8F5W9) RNA polymerase sigma factor RpoD OS=Bathycoccus
prasinos GN=Bathy05g01070 PE=4 SV=1
Length = 733
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 183/288 (63%), Gaps = 12/288 (4%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKC-----------GDQPTFAQWAAVAGVDQKTLRKR 318
EE++L+ IQDL+ LE ++L K GD+ T + WA G+ + L R
Sbjct: 397 EEVQLARKIQDLMNLETTYKELVAKVAEGNDPIAQTHGDKVTKSMWARELGLTEFELEMR 456
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L G K MI++N+RLV+SIAK Y M+ QDL+QEGC GL+RGAEKFD +G+KFS
Sbjct: 457 LTEGKNAKNHMIQANLRLVVSIAKRYANRNMSFQDLIQEGCVGLIRGAEKFDFERGYKFS 516
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TYAHWWI+QAV +S+SDQSRTIRLP H+ E R+ + ++ +NGR EE++
Sbjct: 517 TYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRMNKLEQKFIVQNGREATLEEISAMME 576
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSE-VIADPEAETAEEQLIKQFMKKDLEKV 497
+ +++ + AP SL Q +G + + + E + D E EE K +K+DLE V
Sbjct: 577 MPQVKITQIKKAAMAPVSLAQAVGADDDKRTVEDTLVDNITEHPEESSGKVLLKEDLENV 636
Query: 498 LDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L++LNPRE+ V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A
Sbjct: 637 LNTLNPRERDVLRLRYGLDDGRVKTLEEIGNVFSVTRERIRQIEAKAL 684
>Q05RP2_9SYNE (tr|Q05RP2) RNA polymerase sigma factor OS=Synechococcus sp. RS9916
GN=RS9916_27044 PE=3 SV=1
Length = 479
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 189/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L G +P +WAA+ + R+RL G KEKM
Sbjct: 188 EEIELARKIADLLLLEELAAQFESDNGREPDTKEWAALVEMPLIKFRRRLMLGRRAKEKM 247
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 248 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 307
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 308 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 367
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 368 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 426
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 427 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 462
>A3YZH3_9SYNE (tr|A3YZH3) RNA polymerase sigma factor OS=Synechococcus sp. WH
5701 GN=WH5701_12059 PE=3 SV=1
Length = 469
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 188/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL+ LE+L + G P +WA + + R+RL G KEKM
Sbjct: 178 EEIELARKIADLLLLEELAGQFEQDNGHYPDNKEWAVLVDMPPVKFRRRLMLGRRAKEKM 237
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 238 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 297
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 298 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAK 357
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 358 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVAKNLLREDLEGVLATLSPRERDVL 416
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 417 RLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 452
>Q31C37_PROM9 (tr|Q31C37) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9312) GN=PMT9312_0497 PE=3 SV=1
Length = 393
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 102 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELIDMPLSKFRRRLLLGRRAKEKM 161
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 162 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 221
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 222 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 281
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 282 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 340
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 341 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 376
>I4IUY9_MICAE (tr|I4IUY9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9701 GN=rpoD PE=3 SV=1
Length = 416
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 196/315 (62%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED +AEK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIERIIAEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPMVEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>A2BVF8_PROM5 (tr|A2BVF8) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9515) GN=P9515_05601 PE=3 SV=1
Length = 397
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 106 EEIELARKIADLLQLEELATQFESEKGHFPSVREWAELIDMPLSKFRRRLLLGRRAKEKM 165
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 166 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 225
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 226 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 285
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 286 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 344
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 345 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 380
>Q7V2I0_PROMP (tr|Q7V2I0) RNA polymerase sigma factor OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=sigA PE=3
SV=1
Length = 396
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 105 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELTDMPLSKFRRRLLLGRRAKEKM 164
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 165 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 224
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 225 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 284
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 285 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 343
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 344 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 379
>I4GV22_MICAE (tr|I4GV22) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9806 GN=rpoD PE=3 SV=1
Length = 416
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 196/315 (62%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFA----- 302
EEIEL+ I DL+KLE+++ED +AEK +P +
Sbjct: 86 EEIELARKIADLLKLERIREDFRLYSDAEWGKQVFLFERIEKIIAEKSEKEPKLSDIKAY 145
Query: 303 ------------QWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
+W A + ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELMAPMLEEWQAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>A8G3L2_PROM2 (tr|A8G3L2) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9215) GN=rpoD PE=3 SV=1
Length = 393
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 102 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELIDMPLSKFRRRLLLGRRAKEKM 161
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 162 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 221
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 222 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 281
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 282 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 340
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 341 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 376
>B9P0P2_PROMR (tr|B9P0P2) RNA polymerase sigma factor OS=Prochlorococcus marinus
str. MIT 9202 GN=P9202_111 PE=3 SV=1
Length = 393
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 102 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELIDMPLSKFRRRLLLGRRAKEKM 161
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 162 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 221
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 222 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 281
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 282 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 340
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 341 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 376
>A3PBM1_PROM0 (tr|A3PBM1) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9301) GN=P9301_05231 PE=3 SV=1
Length = 394
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 103 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELIDMPLPKFRRRLLLGRRAKEKM 162
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 163 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 222
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 223 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 282
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 283 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 341
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 342 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 377
>B0JGK3_MICAN (tr|B0JGK3) RNA polymerase sigma factor OS=Microcystis aeruginosa
(strain NIES-843) GN=sigA PE=3 SV=1
Length = 416
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 196/315 (62%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFA----- 302
EEIEL+ I DL+KLE+++ED +AEK +P +
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIAEKSEKEPKLSDIKAY 145
Query: 303 ------------QWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
+W A + ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELMAPLVEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4HLE0_MICAE (tr|I4HLE0) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9809 GN=rpoD PE=3 SV=1
Length = 416
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 196/315 (62%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFA----- 302
EEIEL+ I DL+KLE+++ED +AEK +P +
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIAEKSEKEPKLSDIKAY 145
Query: 303 ------------QWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
+W A + ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELMAPLVEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4FLI6_MICAE (tr|I4FLI6) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9717 GN=rpoD PE=3 SV=1
Length = 416
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 196/315 (62%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFA----- 302
EEIEL+ I DL+KLE+++ED +AEK +P +
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIAEKSEKEPKLSDIKAY 145
Query: 303 ------------QWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
+W A + ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELMAPMLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4IAI2_9CHRO (tr|I4IAI2) RNA polymerase sigma factor OS=Microcystis sp. T1-4
GN=rpoD PE=3 SV=1
Length = 416
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFRLYTDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLVEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>A2BPX8_PROMS (tr|A2BPX8) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain AS9601) GN=A9601_05531 PE=3 SV=1
Length = 394
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 190/276 (68%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEIEL+ I DL++LE+L + G P+ +WA + + R+RL G KEKM
Sbjct: 103 EEIELARKIADLLQLEELATQYESEKGHFPSVREWAELIDMPLAKFRRRLLLGRRAKEKM 162
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+
Sbjct: 163 VQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAI 222
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+AE+ +++++L +
Sbjct: 223 TRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAK 282
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P SLE IG ++ + + I + + E E+ + K +++DLE VL +L+PRE+ V+
Sbjct: 283 SAQLPISLETPIGKEEDSRLGDFI-EADIENPEQDVSKTLLREDLEGVLATLSPRERDVL 341
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 342 RLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKAL 377
>C1E4E8_MICSR (tr|C1E4E8) Predicted protein OS=Micromonas sp. (strain RCC299 /
NOUM17) GN=MICPUN_100150 PE=4 SV=1
Length = 595
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 187/286 (65%), Gaps = 16/286 (5%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEK-CGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEK 328
EE+EL++ IQDL+ L + E L E+ G +PT WA + ++ L +RL G K
Sbjct: 289 EEVELAKRIQDLMYLNSVCERLEEENGGKEPTRFMWAIECNITEQELERRLEEGKRAKNA 348
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
MI++N+RLV+SIAK Y M+ QDL+QEGC GL+RGAEKFD +G+KFSTYAHWWI+QA
Sbjct: 349 MIQANLRLVVSIAKRYANKSMSFQDLIQEGCVGLIRGAEKFDFKRGYKFSTYAHWWIRQA 408
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V +S+SDQSRTIRLP H+ E R+ + +Q+ + GR P EE+A+A ++++++ +
Sbjct: 409 VTRSISDQSRTIRLPVHLFEIISRMSKVERQMVLKLGRDPTHEELADAMEMTVEKIKQIK 468
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIAD---------PEAETAEEQLIKQFMKKDLEKVLD 499
P SL Q + N N + + D PE ET K +K+DLE VL+
Sbjct: 469 KASLVPISLSQTVN-NSNGEDKRTVEDTLIDDYTEHPEGETG-----KVLLKEDLENVLN 522
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+LNPRE+ V+R R+G+DDGR+KTL+EIG + V+RERIRQIE+ A
Sbjct: 523 TLNPRERDVLRLRYGLDDGRVKTLEEIGNVFSVTRERIRQIEAKAL 568
>M0XE66_HORVD (tr|M0XE66) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 342
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 179/264 (67%), Gaps = 6/264 (2%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFK-SGSTSRKKRVPVQEVDYSDPXXXXXX 258
+ + +S+RQ ERKA+RVRA KA + + ++SRKKRV
Sbjct: 65 ARGVAVKSARQPERKARRVRAAMKAAKSFSDRRPVMASSRKKRVK-----GCRNSLGCFY 119
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E+ELSEGIQDL+KLE +Q+++A G +PTF QWAA AG D+ TLRKR
Sbjct: 120 KMSGRKLLTAKQEVELSEGIQDLLKLEAIQKEVAHYNGGEPTFGQWAAAAGTDENTLRKR 179
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L+ GI+CK M+KSN+RLVISIAK ++G G DL+QEG +GL+RGAEKFDASKGF+FS
Sbjct: 180 LSDGIYCKNMMVKSNVRLVISIAKEFEGPGTEFSDLIQEGIQGLIRGAEKFDASKGFRFS 239
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY+HWWIKQA+RKS+ +Q++ IRLP HM EA+ RVKE+R++L + R P +EE+A TG
Sbjct: 240 TYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKESRRRLRRQLNRLPTNEEIALDTG 299
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIG 462
++ +R+ A + P+ SL K+G
Sbjct: 300 MTARRVEAAMCLPRYSVSLTGKVG 323
>A9BK56_HEMAN (tr|A9BK56) RpoD OS=Hemiselmis andersenii GN=HAN_1g44 PE=4 SV=1
Length = 485
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 186/277 (67%), Gaps = 1/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEI+L+ I L+ E ++ L EK +PT ++W A V D K R L+ KE+
Sbjct: 149 EEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRAILHNARRAKER 208
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M+ +N+RLV+SIAK Y GM+LQDL+QEG GL+R AEKFD+ KGFKFSTYA WW+KQA
Sbjct: 209 MVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQA 268
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V ++++D SRTIRLP H+ + +++ + L E GR P +EE+AE +S+++L +VL
Sbjct: 269 VTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVL 328
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + SLE+ + + + + + E+ EE + K ++ DLE V++SL+PRE+ V
Sbjct: 329 QSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDV 388
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A
Sbjct: 389 VRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAI 425
>Q2JS52_SYNJA (tr|Q2JS52) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-3-3Ab) GN=rpoD PE=3 SV=1
Length = 404
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 193/281 (68%), Gaps = 6/281 (2%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCG-----DQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EEIEL+ I DL++LE+ +E + ++ G ++ WA + R+RL+ G
Sbjct: 108 EEIELARKIADLLELERAREAVFQRMGLWSDPEEVPETLWAEEVKMSLPEFRRRLHRGRR 167
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
KEKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 168 AKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 227
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ KQL E GR P +EE+A +++++L
Sbjct: 228 IRQAITRAIADQSRTIRLPVHLYETISRIKKVTKQLSQELGRRPTEEEIATRMEITIEKL 287
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + E ET EE++ K +++DLE VL++L PR
Sbjct: 288 RFIAKSAQLPISLETPIGKEEDSRLGDFI-ESEGETPEERVAKVLLREDLESVLETLTPR 346
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 347 ERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 387
>I4HZ12_MICAE (tr|I4HZ12) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9808 GN=rpoD PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4GN30_MICAE (tr|I4GN30) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7941 GN=rpoD PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4GB76_MICAE (tr|I4GB76) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9443 GN=rpoD PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4FFA4_MICAE (tr|I4FFA4) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9432 GN=rpoD PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>B1PVV9_MICAE (tr|B1PVV9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7820 GN=rpoD1 PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>I4H3L6_MICAE (tr|I4H3L6) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9807 GN=rpoD PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>A8YBI5_MICAE (tr|A8YBI5) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7806 GN=rpoD1 PE=3 SV=1
Length = 416
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 195/315 (61%), Gaps = 40/315 (12%)
Query: 270 EEIELSEGIQDLIKLEKLQED----------------------LAEKCGDQPTFAQWAAV 307
EEIEL+ I DL+KLE+++ED + EK +P + A
Sbjct: 86 EEIELARKIADLLKLERIREDFCLYSDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAY 145
Query: 308 AGVDQKT-----------------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMN 350
G + T ++RL +G KEKM++SN+RLV+SIAK Y G++
Sbjct: 146 LGKTELTAPLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLS 205
Query: 351 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 410
QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 206 FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI 265
Query: 411 YRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPS 470
R+K+ K L E R P +EE+A +++++L + + + P SLE IG ++ +
Sbjct: 266 SRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG 325
Query: 471 EVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEML 530
+ I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+EIG++
Sbjct: 326 DFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIF 384
Query: 531 GVSRERIRQIESCAF 545
V+RERIRQIE+ A
Sbjct: 385 NVTRERIRQIEAKAL 399
>Q8S9D0_GUITH (tr|Q8S9D0) RNA polymerase sigma factor OS=Guillardia theta GN=sigA
PE=2 SV=1
Length = 490
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 186/277 (67%), Gaps = 1/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEI+L+ I L+ E ++ L EK +PT ++W A V D K R L+ KE+
Sbjct: 149 EEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRSILHNARRAKER 208
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M+ +N+RLV+SIAK Y GM+LQDL+QEG GL+R AEKFD+ KGFKFSTYA WW+KQA
Sbjct: 209 MVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQA 268
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V ++++D SRTIRLP H+ + +++ + L E GR P +EE+AE +S+++L +VL
Sbjct: 269 VTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVL 328
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + SLE+ + + + + + E+ EE + K ++ DLE V++SL+PRE+ V
Sbjct: 329 QSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDV 388
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A
Sbjct: 389 VRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAI 425
>J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomonas
mesostigmatica CCMP1168 GN=rpoD PE=4 SV=1
Length = 485
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 186/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEI+L+ I L+ E ++ L EK +PT ++W A V D K R L+ KE+
Sbjct: 152 EEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACKVSDVKKFRAILHNARRAKER 211
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M+ +N+RLV+SIAK Y GM+LQDL+QEG GL+R AEKFD+ KGFKFSTYA WW+KQA
Sbjct: 212 MVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQA 271
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V ++++D SRTIRLP H+ + +++ + L E GR P +EE+AE +S+++L +VL
Sbjct: 272 VTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSPTEEEIAEKMDMSVEKLRSVL 331
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + SLE+ + + + + + E+ EE + K ++ DLE V++SL+PRE+ V
Sbjct: 332 QSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDV 391
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCA 544
+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A
Sbjct: 392 VRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKA 427
>L8N2V5_9CYAN (tr|L8N2V5) RNA polymerase sigma factor OS=Pseudanabaena biceps PCC
7429 GN=Pse7429DRAFT_1651 PE=3 SV=1
Length = 394
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 192/279 (68%), Gaps = 4/279 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFA---QWAAVAGVDQKTLRKRLNYGIFCK 326
EEIEL+ I DL++LE +E+LA + P +WA G+ RKRL+ G K
Sbjct: 100 EEIELARKIADLLELELKREELATEADCHPDDVREPEWAIKMGMPLGEFRKRLHSGRRAK 159
Query: 327 EKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 386
+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+
Sbjct: 160 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 219
Query: 387 QAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSA 446
QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L
Sbjct: 220 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRF 279
Query: 447 VLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+ + + P SLE IG ++ + + I + E ET ++Q+ K +++DLE VL +L+PRE+
Sbjct: 280 IAKSAQLPISLETPIGKEEDSRLGDFI-ESEGETPDDQVAKSLLREDLESVLGTLSPRER 338
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 339 DVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 377
>R7QDV9_CHOCR (tr|R7QDV9) Stackhouse genomic scaffold, scaffold_226 OS=Chondrus
crispus GN=CHC_T00004323001 PE=4 SV=1
Length = 414
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 185/279 (66%), Gaps = 6/279 (2%)
Query: 271 EIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMI 330
EI L+ I L++LE++ L + G +P +WAA A ++ + R+ L G+ KE M+
Sbjct: 118 EINLAREIAKLLELERISATLKDANGFEPAIPEWAAAADMNIEVFRETLRRGLRAKEHMV 177
Query: 331 KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 390
+N+RLV+SIAK Y G++ QDL+QEG GL+RGAEKFD +KGFKFSTYA WWI+QA+
Sbjct: 178 AANLRLVVSIAKKYLNRGLSFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAIT 237
Query: 391 KSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLT 450
++++D SR IRLP H+ + +K+A K L +E R P + E+AE +S+++L + +
Sbjct: 238 RAIADHSRPIRLPVHVNDTIAAIKKATKLLSTEMNRSPTETEIAERLQISIEKLRFLSTS 297
Query: 451 PKAPRSLEQKIGINQNLKPSEVIADP----EAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+A SLE IG ++ K S E +T EE +K +++DLE VL++L+PRE+
Sbjct: 298 ARATISLETPIG--RDGKESNATLGSFIVWEGDTPEESTMKSLLREDLENVLNTLSPRER 355
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
V+R R+G DDG+MKTL+EIG + V+RERIRQIE+ A
Sbjct: 356 DVVRMRYGFDDGKMKTLEEIGCLFAVTRERIRQIEAKAL 394
>D3EMZ4_UCYNA (tr|D3EMZ4) RNA polymerase sigma factor OS=cyanobacterium UCYN-A
GN=UCYN_00890 PE=3 SV=1
Length = 420
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 195/322 (60%), Gaps = 47/322 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAA----------------------- 306
EEIEL+ I DL++LE+++E L E+ P QWA
Sbjct: 83 EEIELARKIADLLQLERIREALWEELDQVPNDEQWAKRIFQWENIEQIIRTQSSKEKEPK 142
Query: 307 -------------------VAGVDQKT----LRKRLNYGIFCKEKMIKSNIRLVISIAKN 343
+ ++QK+ ++RL G K+KM+ SN+RLV+SIAK
Sbjct: 143 WSEVTSLLQEKKTISNLEKIWELEQKSYLPKFKRRLYLGRKAKDKMVHSNLRLVVSIAKK 202
Query: 344 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 403
Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP
Sbjct: 203 YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLP 262
Query: 404 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGI 463
H+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG
Sbjct: 263 VHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGK 322
Query: 464 NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTL 523
++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL
Sbjct: 323 EEDSRLGDFI-EADGETPEDEVAKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTL 381
Query: 524 QEIGEMLGVSRERIRQIESCAF 545
+EIG++ V+RERIRQIE+ A
Sbjct: 382 EEIGQIFNVTRERIRQIEAKAL 403
>A3ISY9_9CHRO (tr|A3ISY9) RNA polymerase sigma factor OS=Cyanothece sp. CCY0110
GN=CY0110_28844 PE=3 SV=1
Length = 416
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 195/322 (60%), Gaps = 47/322 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQW------------------------- 304
EEIEL+ I DL++LE+++E L E+ +PT QW
Sbjct: 79 EEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQWENIEQMLRAQSSKEKEPK 138
Query: 305 -AAVAGVDQKT--------------------LRKRLNYGIFCKEKMIKSNIRLVISIAKN 343
+ V + QK ++RL G K+KM+ SN+RLV+SIAK
Sbjct: 139 WSEVTDMLQKAEIISDLEKTWKLESKAYLPKFKRRLYLGRKAKDKMVHSNLRLVVSIAKK 198
Query: 344 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 403
Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP
Sbjct: 199 YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLP 258
Query: 404 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGI 463
H+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG
Sbjct: 259 VHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGK 318
Query: 464 NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTL 523
++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL
Sbjct: 319 EEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTL 377
Query: 524 QEIGEMLGVSRERIRQIESCAF 545
+EIG++ V+RERIRQIE+ A
Sbjct: 378 EEIGQIFNVTRERIRQIEAKAL 399
>B1WS32_CYAA5 (tr|B1WS32) RNA polymerase sigma factor OS=Cyanothece sp. (strain
ATCC 51142) GN=sigA PE=3 SV=1
Length = 416
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 195/322 (60%), Gaps = 47/322 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQW------------------------- 304
EEIEL+ I DL++LE+++E L E+ +PT QW
Sbjct: 79 EEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQWENIEQMLRAQSAKDKDPK 138
Query: 305 ----------AAVAGVDQKT-----------LRKRLNYGIFCKEKMIKSNIRLVISIAKN 343
A + +KT ++RL G K+KM+ SN+RLV+SIAK
Sbjct: 139 WSEVTTMLQQADIISDLEKTWKLESKAYLPKFKRRLYLGRKAKDKMVHSNLRLVVSIAKK 198
Query: 344 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 403
Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP
Sbjct: 199 YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLP 258
Query: 404 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGI 463
H+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG
Sbjct: 259 VHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGK 318
Query: 464 NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTL 523
++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL
Sbjct: 319 EEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTL 377
Query: 524 QEIGEMLGVSRERIRQIESCAF 545
+EIG++ V+RERIRQIE+ A
Sbjct: 378 EEIGQIFNVTRERIRQIEAKAL 399
>G6GVW3_9CHRO (tr|G6GVW3) RNA polymerase sigma factor OS=Cyanothece sp. ATCC
51472 GN=Cy51472DRAFT_3126 PE=3 SV=1
Length = 416
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 195/322 (60%), Gaps = 47/322 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQW------------------------- 304
EEIEL+ I DL++LE+++E L E+ +PT QW
Sbjct: 79 EEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQWENIEQMLRAQSAKDKDPK 138
Query: 305 ----------AAVAGVDQKT-----------LRKRLNYGIFCKEKMIKSNIRLVISIAKN 343
A + +KT ++RL G K+KM+ SN+RLV+SIAK
Sbjct: 139 WSEVTTMLQQADIISDLEKTWKLESKAYLPKFKRRLYLGRKAKDKMVHSNLRLVVSIAKK 198
Query: 344 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 403
Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP
Sbjct: 199 YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLP 258
Query: 404 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGI 463
H+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG
Sbjct: 259 VHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGK 318
Query: 464 NQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTL 523
++ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL
Sbjct: 319 EEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTL 377
Query: 524 QEIGEMLGVSRERIRQIESCAF 545
+EIG++ V+RERIRQIE+ A
Sbjct: 378 EEIGQIFNVTRERIRQIEAKAL 399
>Q98RZ3_GUITH (tr|Q98RZ3) RNA-polymerase sigma factor OS=Guillardia theta GN=rpoD
PE=4 SV=1
Length = 460
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 189/297 (63%), Gaps = 1/297 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEI+L+ I L+ E ++ L +K +PT ++W A V D + R L+ KE+
Sbjct: 132 EEIQLAREISQLLHWEHVKISLRDKLRREPTNSEWTAACKVSDVRKFRSILHNARRAKER 191
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
M+ +N+RLV+SIAK Y GM+LQDL+QEG GL+R AEKFD+ KGFKFSTYA WW+KQA
Sbjct: 192 MVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEKFDSEKGFKFSTYATWWVKQA 251
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V ++++D SRTIRLP H+ + +++ + L E GR P +EE+A+ +S+++L VL
Sbjct: 252 VTRAIADHSRTIRLPVHLYDTISAIRKTTRNLNIEIGRSPTEEEIAKRMDMSVEKLRNVL 311
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + SLE+ + + + + + E+ EE + K ++ DLE V++SL+PRE+ V
Sbjct: 312 QSAQPTLSLERPLKNDDDTSQLSDFIEADQESPEEHVEKSMLRDDLENVINSLSPRERDV 371
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAFXXXXXXXXXXXXXXYLVSQS 565
+R R+G+DDGR+KTL+EIG++ V+RER+RQIE+ A Y+ S S
Sbjct: 372 VRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKLRQPYRSSILRDYVASNS 428
>M1BY22_SOLTU (tr|M1BY22) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 562
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 211/343 (61%), Gaps = 3/343 (0%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIV-SFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXX 262
T RS+R TER++++ R K T + + +SG +++V + +D +DP
Sbjct: 202 TVRSTRFTERQSRK-RGAPKPTQQVQETNRSGRPDVRRKVN-ESIDLNDPLRMFLWGPET 259
Query: 263 XXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYG 322
EE EL IQ +KL++++ L + +PT +WA AG+ + L+ +L G
Sbjct: 260 KQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSG 319
Query: 323 IFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 382
+EK+I +N+R+V+ IAK YQG G+NLQDL+QEG GL++ EKF G +F TYA+
Sbjct: 320 KSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAY 379
Query: 383 WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMK 442
WWI+Q+VRK++ SRTIRLP ++ +VK+A+K+ + R+P E++A G+S++
Sbjct: 380 WWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVE 439
Query: 443 RLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLN 502
RL +L + P S++Q + +Q+ E+ AD E E + KQ M++ + +L+ L+
Sbjct: 440 RLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLS 499
Query: 503 PREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
P+E+++IR RFG+ DG+ K+L EIG + G+S+ER+RQ+E+ A
Sbjct: 500 PKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRAL 542
>M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra017213 PE=4 SV=1
Length = 533
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 2/343 (0%)
Query: 204 TARSSRQTERKAKRVRATE-KATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXX 262
RS + ER+A+ RA + N S+ ++ KK++ Q D D
Sbjct: 172 VVRSKKLLERRARNRRAPKPNGLDNESSYLPQKSNAKKKM-RQGFDNDDSLQLFLWGPET 230
Query: 263 XXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYG 322
EE EL IQ+LIKLEK++ L + G +PT A+WA G+ L+ ++ G
Sbjct: 231 KQLLTAKEEAELITHIQNLIKLEKVKTKLESQNGCEPTIAEWAEALGISGPVLKSEIHRG 290
Query: 323 IFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 382
+EK+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF GF+F+TYA+
Sbjct: 291 RSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGFRFATYAY 350
Query: 383 WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMK 442
WWI+Q++RKS+ SRTIRLP ++ +V EARK E P EE+A G+S +
Sbjct: 351 WWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYLPSKEELAGHVGVSTE 410
Query: 443 RLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLN 502
+L +L + P S++Q I +Q++ EV D ET + + KQ M+ + +L+ L+
Sbjct: 411 KLDKLLYNTRTPLSMQQPIWSDQDITFQEVTPDSGIETPDMSVGKQMMRNHVRNLLNVLS 470
Query: 503 PREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
P+E+++I+ RFG+D G+ ++L EIGE+ G+S+ER+RQ+ES A
Sbjct: 471 PKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRAL 513
>Q4C7J7_CROWT (tr|Q4C7J7) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
8501 GN=CwatDRAFT_5683 PE=3 SV=1
Length = 414
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 45/320 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQW------------------------- 304
EEIEL+ I DL++LE+++E L E+ +P QW
Sbjct: 79 EEIELARKIADLLQLERIREALWEELDQEPNDDQWGHRIFQWENIEQRLCSQKNKEPKWS 138
Query: 305 --------AAVAGVDQKT-----------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQ 345
A + +KT ++RL G K+KM+ SN+RLV+SIAK Y
Sbjct: 139 DIVAELNKAEIISDLEKTWKQQSKAYLPKFKRRLYLGRRAKDKMVHSNLRLVVSIAKKYM 198
Query: 346 GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 405
G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H
Sbjct: 199 NRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVH 258
Query: 406 MVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQ 465
+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG +
Sbjct: 259 LYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEE 318
Query: 466 NLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQE 525
+ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+E
Sbjct: 319 DSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEE 377
Query: 526 IGEMLGVSRERIRQIESCAF 545
IG++ V+RERIRQIE+ A
Sbjct: 378 IGQIFNVTRERIRQIEAKAL 397
>G5JAB0_CROWT (tr|G5JAB0) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
0003 GN=CWATWH0003_4374 PE=3 SV=1
Length = 414
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 45/320 (14%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQW------------------------- 304
EEIEL+ I DL++LE+++E L E+ +P QW
Sbjct: 79 EEIELARKIADLLQLERIREALWEELDQEPNDDQWGHRIFQWENIEQRLCSQKNKEPKWS 138
Query: 305 --------AAVAGVDQKT-----------LRKRLNYGIFCKEKMIKSNIRLVISIAKNYQ 345
A + +KT ++RL G K+KM+ SN+RLV+SIAK Y
Sbjct: 139 DIVAELNKAEIISDLEKTWKQQSKAYLPKFKRRLYLGRRAKDKMVHSNLRLVVSIAKKYM 198
Query: 346 GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 405
G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H
Sbjct: 199 NRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVH 258
Query: 406 MVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQ 465
+ E R+K+ K L E R P +EE+A +++++L + + + P SLE IG +
Sbjct: 259 LYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEE 318
Query: 466 NLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQE 525
+ + + I + + ET E+++ K +++DLE VLD+L+PRE+ V+R R+G+DDGRMKTL+E
Sbjct: 319 DSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEE 377
Query: 526 IGEMLGVSRERIRQIESCAF 545
IG++ V+RERIRQIE+ A
Sbjct: 378 IGQIFNVTRERIRQIEAKAL 397
>B9S0J0_RICCO (tr|B9S0J0) RNA polymerase sigma factor rpoD, putative OS=Ricinus
communis GN=RCOM_1355260 PE=4 SV=1
Length = 548
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 201/342 (58%), Gaps = 1/342 (0%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXX 263
T RS+R+ ER++K R T+ + S +K++ + D DP
Sbjct: 188 TVRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGVQKKIN-EGFDPKDPLRLFLWGPETK 246
Query: 264 XXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGI 323
EE EL +QDL+ LE ++E + G PT +WA G+ ++ +L+ G
Sbjct: 247 QLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGN 306
Query: 324 FCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 383
+EK+I +N+R+V+ IAK YQG G++LQDL+QEG GL++ EKF G +F+TYA+W
Sbjct: 307 RSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYW 366
Query: 384 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKR 443
WI+Q VRK++ SRTIRLP ++ +V EA++ E +P EE+A+ G++ R
Sbjct: 367 WIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVR 426
Query: 444 LSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNP 503
L +L + P S++Q + +Q E+ AD E E E + KQ M+K + +L+ LNP
Sbjct: 427 LERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNP 486
Query: 504 REKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RE+++IR R+G++DG+ K+L EIG + G+S+ER+RQ+ES A
Sbjct: 487 RERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRAL 528
>R7QJX2_CHOCR (tr|R7QJX2) Stackhouse genomic scaffold, scaffold_331 OS=Chondrus
crispus GN=CHC_T00005988001 PE=4 SV=1
Length = 506
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 184/277 (66%), Gaps = 2/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ L I+DL++ +++ +LA+ G QP+ +WA G+D+ RL + K++M
Sbjct: 211 EEVTLGRQIRDLMQWQRMFVELADSIGRQPSTNEWAQYMGMDETDFATRLLHAKRAKDRM 270
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I N+RLV+SIAK Y GM L DL+QEG GL+R EKFDA +GFKFSTYA WW++QAV
Sbjct: 271 IVCNLRLVVSIAKRYMNRGMPLSDLIQEGTLGLIRACEKFDAERGFKFSTYATWWVRQAV 330
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
+S++DQSRTIRLP H+ + ++ A K L +E GR P ++E+A+ +++++L A +
Sbjct: 331 TRSIADQSRTIRLPVHLYDTILAIRRATKFLTNELGRPPLEQEIADYCKITVEKLRATRV 390
Query: 450 TPKAPRSLEQKIGINQN-LKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
++ L+ + + + L S+VI E E+ E+++ ++ DLE V++SL PRE+ V
Sbjct: 391 NMQSALPLDCPLSSSDDALTLSDVIESDE-ESPEDRVESSLLRDDLEHVVNSLTPRERDV 449
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+R R+G+DDGR KTL+EIG V++ER+RQIES A
Sbjct: 450 VRMRYGLDDGRAKTLEEIGRAFDVTKERVRQIESKAL 486
>I1L8Z5_SOYBN (tr|I1L8Z5) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 575
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 211/347 (60%), Gaps = 5/347 (1%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTS-----RKKRVPVQEVDYSDPXXXXXX 258
T RS+R ER++K+ + + + ++ + R ++ +E+D DP
Sbjct: 209 TVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQDDPLRLFLW 268
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E +L IQDL++LE+++ +L + G +PT A+WA AG++ + L+ +
Sbjct: 269 GPETKQLLTLEQESQLISQIQDLLRLEEVKTNLQSQFGREPTMAEWAEGAGLNCRLLQSQ 328
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L+ G +EK+I++N+R+V+ +AK+YQG G++LQDL+QEG GL++ EKF+ G +F
Sbjct: 329 LHSGNRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLAGSRFG 388
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
YA WWI+QA+RK++ SRTIRLP + +V EA+K E HP EE+A G
Sbjct: 389 NYAFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVG 448
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
++++++ +L + + P S++Q + +QN E+ ADP E + + KQ M++ + VL
Sbjct: 449 VTVEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVTVEKQLMRRHVLNVL 508
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+P+E+++IR R+G +DG K+L EIG++ G+S+ER+RQ+E A
Sbjct: 509 SVLHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRAL 555
>E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungiella halophila
PE=2 SV=1
Length = 547
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 196/341 (57%), Gaps = 1/341 (0%)
Query: 205 ARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXX 264
RS RQ ER+AK RA + + + + KK++ Q D D
Sbjct: 188 VRSKRQLERRAKNRRAPKSNNMDSEGYVPQKINAKKKMK-QGFDTDDALQLFLWGPETKQ 246
Query: 265 XXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EE EL IQ LIKLEK++ L + G +PT +WA G+ L+ ++ G
Sbjct: 247 LLTAKEEAELIAHIQHLIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKSEIHRGRS 306
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
+EK+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 307 SREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWW 366
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+Q++RKS+ SRTIRLP ++ +V EARK + P E++A G+S ++L
Sbjct: 367 IRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVGVSTEKL 426
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+L + P S++Q I +Q+ EV D ET + KQ M+ + +L+ L+P+
Sbjct: 427 DKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLLNVLSPK 486
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
EK++I+ RFG+D G+ ++L EIGE+ G+S+ER+RQ+ES A
Sbjct: 487 EKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRAL 527
>D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabidopsis lyrata
subsp. lyrata GN=SIGF PE=4 SV=1
Length = 546
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 196/341 (57%), Gaps = 1/341 (0%)
Query: 205 ARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXX 264
RS RQ ER+AK RA + + + + KK+ Q VD D
Sbjct: 187 VRSKRQLERRAKNRRAPKSNDVDNEGYVPQKINAKKKFK-QGVDTDDALQLFLWGPETKQ 245
Query: 265 XXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EE EL IQ L+KLEK++ L + G +PT +WA G+ L+ ++ G
Sbjct: 246 LLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPDLKSEIHRGRS 305
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
+EK+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 306 SREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWW 365
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+Q++RKS+ SRTIRLP ++ +V EARK E P E++A G+S ++L
Sbjct: 366 IRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHVGVSTEKL 425
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Sbjct: 426 DKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQMMRNHVRNLLNVLSPK 485
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+++I+ RFG+D G+ ++L EIGE+ G+S+ER+RQ+ES A
Sbjct: 486 ERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRAL 526
>K4CQJ3_SOLLC (tr|K4CQJ3) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc09g008040.2 PE=4 SV=1
Length = 563
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 209/344 (60%), Gaps = 4/344 (1%)
Query: 204 TARSSRQTERKAKRVRATEKATTNI--VSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
T RS+R ER++++ R K + + +SG +++V + +D +DP
Sbjct: 202 TVRSTRFIERQSRK-RGAPKPIQEVQETNNRSGRPDVRRKVN-ESIDLNDPLRMFLWGPE 259
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE EL IQ +KL++++ L + +PT +WA AG+ + L+ +L
Sbjct: 260 TKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLS 319
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G +EK+I +N+R+V+ IAK YQG G+NLQDL+QEG GL++ EKF G +F TYA
Sbjct: 320 GKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYA 379
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
+WWI+Q+VRK++ SRTIRLP ++ +VK+A+++ + RHP E++A G+S+
Sbjct: 380 YWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKEDIASCAGMSV 439
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+RL +L + P S++Q + +Q+ E+ AD E E + KQ M++ + +L+ L
Sbjct: 440 ERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVL 499
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+P+E+++IR RFG+ DG+ K+L EIG + G+S+ER+RQ+E+ A
Sbjct: 500 SPKERKIIRLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETRAL 543
>Q2JJL6_SYNJB (tr|Q2JJL6) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=rpoD PE=3 SV=1
Length = 403
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 191/281 (67%), Gaps = 6/281 (2%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCG-----DQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EEIEL+ I DL++LE+ +E + ++ G ++ WA + R+RL+ G
Sbjct: 107 EEIELARKIADLLELERAREAVFQRMGLWSDPEEVPDTLWAEEVKMSLPEFRRRLHRGRR 166
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
KEKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 167 AKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 226
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EE+A +++++L
Sbjct: 227 IRQAITRAIADQSRTIRLPVHLYETISRIKKVTKLLSQELGRKPTEEEIATRMEITIEKL 286
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VL++L R
Sbjct: 287 RFIAKSAQLPISLETPIGKEEDSRLGDFI-ESDGETPEDRVAKVLLREDLESVLETLTAR 345
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V++ R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 346 ERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 386
>M5WAB7_PRUPE (tr|M5WAB7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa003513mg PE=4 SV=1
Length = 568
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 235/425 (55%), Gaps = 15/425 (3%)
Query: 130 EAGYRPQVPSKSDNLLLNWIQHMEAE--DVVAGG--SMGAGAEVMEAVDISPS-EEEFDD 184
+ G +P P ++L +HM+ E +VVA ++ A E + S S +FDD
Sbjct: 130 QTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDD 189
Query: 185 AXXXXXXXXXXXXXXSNSITARSSRQTERKAKRVRATEKATTNIVSFKS----GSTSRKK 240
T RS+R ER+ KR++ + + ++ +S GS RKK
Sbjct: 190 LGYTSLANWIVEEEK----TVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKK 245
Query: 241 RVPVQEVDYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPT 300
+ + +DP EE EL +QDL KLE+++ L + G +PT
Sbjct: 246 --ISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPT 303
Query: 301 FAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 360
+WA G+ + L+ +L G +EK+I +N+R+V+ IAK YQG G+ LQDL+QEG
Sbjct: 304 LIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSM 363
Query: 361 GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 420
GL++ EKF G +F+TYA+WWI+Q VRK++ SRTIRLP ++ +V EA+K
Sbjct: 364 GLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSC 423
Query: 421 YSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAET 480
E +P+ EE+A G+++++L +L + P S++Q + +Q+ EV AD E
Sbjct: 424 IQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEI 483
Query: 481 AEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQI 540
+ + KQ M++ + +L LN RE+++IR R+G++DG+ ++L EIG M G+S+ER+RQ+
Sbjct: 484 PDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQL 543
Query: 541 ESCAF 545
ES AF
Sbjct: 544 ESRAF 548
>I1LZ84_SOYBN (tr|I1LZ84) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 574
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 209/347 (60%), Gaps = 5/347 (1%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQ-----EVDYSDPXXXXXX 258
T RS+R ER++K+ + + + ++ + +++ V+ E+D +DP
Sbjct: 208 TVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAHEKLRVEKKKNEELDQNDPLCFFLR 267
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E +L IQDL++LE+++ L + G +PT A+WA G++ + L +
Sbjct: 268 GPETKQLLTLEQESQLISQIQDLLRLEEVKTKLQSQFGREPTMAEWAEGVGLNCRMLHAQ 327
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L G +EK+I++N+R+V+ +AK+YQG G++LQDL+QEG GL++ EKF+ G +F
Sbjct: 328 LRSGSRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLVGSRFG 387
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
YA WWI+QA+RK++ SRTIRLP + +V EA+K E HP EE+A G
Sbjct: 388 NYAFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVG 447
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
++++++ +L + + P S++Q + +QN E+ ADP E + + KQ M++ + VL
Sbjct: 448 VTVEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVSVEKQLMRQHVLNVL 507
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+P+E+++IR R+G +DG K+L EIG++ G+S+ER+RQ+E A
Sbjct: 508 SILHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRAL 554
>G7IA88_MEDTR (tr|G7IA88) RNA polymerase sigma factor OS=Medicago truncatula
GN=MTR_1g063850 PE=4 SV=1
Length = 567
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 211/348 (60%), Gaps = 7/348 (2%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQE-----VDYSDPXXXXXX 258
T RS+R ER+AK + + + ++ G + ++++ VQ+ ++ SDP
Sbjct: 201 TVRSTRLRERRAKERKVPKLKVKDKETYLDGKDAAEEKLQVQKKISKGMNQSDPLNKFLQ 260
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
+E +L IQ+L++LE L+ L + G +PT A+WA AG++ + ++ +
Sbjct: 261 SPESKQLLTSEQESQLVVQIQELLRLEDLKTSLQSQFGREPTMAEWAEGAGLNCRKMKAQ 320
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L G +EK+I++N+RLV IAK+YQG G++++DL+QEG GL++ +KF G +F+
Sbjct: 321 LRCGNRSREKLIQANLRLVHYIAKSYQGRGLSIEDLLQEGSTGLIKSIKKFKTQAGCRFA 380
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR-HPDDEEVAEAT 437
+YA+WWIKQA+RK++ + SRTIRLP + +V EA+K LY E G +P EE+A
Sbjct: 381 SYAYWWIKQAIRKAIYNHSRTIRLPEKVYNKLSKVLEAKK-LYKEEGNLNPTKEELARRV 439
Query: 438 GLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKV 497
G+S ++ +L + P S++ +G + E+ AD E+ + KQ M++ + V
Sbjct: 440 GISPDKVDRLLFVARIPISMQNTVGSETDTTFQEITADCAIESPNMSVAKQLMRRHVLNV 499
Query: 498 LDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+ L P+E+++IR RFG +DG K+L EIGE+ G+SRER+RQ+ES A
Sbjct: 500 LNILRPKERRIIRLRFGFEDGEEKSLSEIGEIFGLSRERVRQLESRAL 547
>D7TQP0_VITVI (tr|D7TQP0) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_08s0040g01560 PE=4 SV=1
Length = 561
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 203/343 (59%), Gaps = 5/343 (1%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXX 263
T RS+R ER++K+ R + A + RK + D DP
Sbjct: 203 TVRSTRLLERRSKKRRNPKVAVHENHGSRRAEVQRKIN---EGYDPKDPLRLFLWGPETR 259
Query: 264 XXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGI 323
EE EL IQ+L++LE++++ L +PT +WA G+ + L+ +L+ G
Sbjct: 260 KLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGN 319
Query: 324 FCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 383
++K+I +N+R+V+ IAK YQG G+NLQDL+QEG GL+ EKF + G +F++YA+W
Sbjct: 320 RSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYW 379
Query: 384 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH-PDDEEVAEATGLSMK 442
WI+QAVRK++ SRTIRLP +M +VKEA K+L+ + G H P EE+AE G++++
Sbjct: 380 WIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEA-KRLFIQEGHHDPTKEEIAERVGITIE 438
Query: 443 RLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLN 502
+L +LL + P S++Q + +Q+ EV AD E + + KQ M++ + +L L
Sbjct: 439 KLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLT 498
Query: 503 PREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
P+E+++IR RFG+ DG +TL EIG + G S+ER+RQ+E A
Sbjct: 499 PKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRAL 541
>F7ULM9_SYNYG (tr|F7ULM9) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / GT-S) GN=rpoDI PE=3 SV=1
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 189 AKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 248
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L
Sbjct: 249 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKL 308
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PR
Sbjct: 309 RFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPR 367
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 368 ERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 408
>M1MNH4_9SYNC (tr|M1MNH4) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoDI PE=3 SV=1
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 189 AKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 248
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L
Sbjct: 249 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKL 308
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PR
Sbjct: 309 RFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPR 367
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 368 ERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 408
>H0PJ89_9SYNC (tr|H0PJ89) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-P GN=rpoDI PE=3 SV=1
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 189 AKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 248
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L
Sbjct: 249 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKL 308
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PR
Sbjct: 309 RFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPR 367
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 368 ERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 408
>H0PED4_9SYNC (tr|H0PED4) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-N GN=rpoDI PE=3 SV=1
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 189 AKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 248
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L
Sbjct: 249 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKL 308
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PR
Sbjct: 309 RFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPR 367
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 368 ERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 408
>H0P220_9SYNC (tr|H0P220) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. GT-I GN=rpoDI PE=3 SV=1
Length = 425
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WW
Sbjct: 189 AKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 248
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EE+AE +++++L
Sbjct: 249 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKL 308
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+ + + P SLE IG ++ + + I + + ET E+++ K +++DLE VLD+L+PR
Sbjct: 309 RFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLENVLDTLSPR 367
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ V+R R+G+DDGRMKTL+EIG++ V+RERIRQIE+ A
Sbjct: 368 ERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKAL 408
>K9PYY3_9CYAN (tr|K9PYY3) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Leptolyngbya sp. PCC 7376 GN=Lepto7376_1803 PE=4 SV=1
Length = 318
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 185/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ S +Q ++ LEKL+ +L E D+PT +WA A + QK L+KR++ G K+KM
Sbjct: 28 EEVVYSRRVQQMVALEKLKAELTEHQEDEPTLKEWAKAAKITQKELKKRMSIGAQAKQKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYIKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL +NGR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQKNGRAATIPELAEELDLTTKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G N + + E++ D T ++ +K+DL +++ L ++++V+
Sbjct: 208 KSRQPLSLDLRVGDNNDTELIELLED-HGTTPDDFATSAALKRDLHRMISDLTAQQQEVL 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG++DG+ TL +IGE L +SRER+RQIE A
Sbjct: 267 TLRFGLNDGQPHTLAKIGEHLSISRERVRQIEREAL 302
>B9MTE1_POPTR (tr|B9MTE1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_809851 PE=4 SV=1
Length = 535
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 196/341 (57%), Gaps = 1/341 (0%)
Query: 205 ARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXX 264
RS R R++ RA + ++ S S +KR+ Q D +DP
Sbjct: 176 VRSRRHLARQSLNRRAPKTKDLIFETYDSKSADIQKRLS-QGFDPNDPLRLFLWGPETKQ 234
Query: 265 XXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EE EL IQDL+ LE ++ L + G +PT +WA G+ L+ +L+ G
Sbjct: 235 LLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNR 294
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
+EK+I +N+R+V+ IAK YQ G+ LQDL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 295 SREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWW 354
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+Q + K++ SRTIRLP ++ +V EA++ E P EE+A G+++ +L
Sbjct: 355 IRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKL 414
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+L + P S++Q + +QN E+ AD E E + + KQ M+K + +L+ L+ +
Sbjct: 415 EKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLK 474
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+++IR RFG++DG+ K+L EIG + G+S+ER+RQ+ES A
Sbjct: 475 ERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRAL 515
>M1BY20_SOLTU (tr|M1BY20) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 582
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 211/363 (58%), Gaps = 23/363 (6%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIV-SFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXX 262
T RS+R TER++++ R K T + + +SG +++V + +D +DP
Sbjct: 202 TVRSTRFTERQSRK-RGAPKPTQQVQETNRSGRPDVRRKVN-ESIDLNDPLRMFLWGPET 259
Query: 263 XXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYG 322
EE EL IQ +KL++++ L + +PT +WA AG+ + L+ +L G
Sbjct: 260 KQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSG 319
Query: 323 IFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 382
+EK+I +N+R+V+ IAK YQG G+NLQDL+QEG GL++ EKF G +F TYA+
Sbjct: 320 KSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAY 379
Query: 383 WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMK 442
WWI+Q+VRK++ SRTIRLP ++ +VK+A+K+ + R+P E++A G+S++
Sbjct: 380 WWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVE 439
Query: 443 RLSAVLLTPKAPRSLEQKIGINQN--------------------LKPSEVIADPEAETAE 482
RL +L + P S++Q + +Q+ E+ AD E E
Sbjct: 440 RLQNLLSNVRTPLSMQQSVWSDQDTTFQEIFDLVLTVAKERISFFSIQEITADNAIEAPE 499
Query: 483 EQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIES 542
+ KQ M++ + +L+ L+P+E+++IR RFG+ DG+ K+L EIG + G+S+ER+RQ+E+
Sbjct: 500 LSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLET 559
Query: 543 CAF 545
A
Sbjct: 560 RAL 562
>R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022939mg PE=4 SV=1
Length = 547
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 194/341 (56%), Gaps = 1/341 (0%)
Query: 205 ARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXXXXX 264
RS R ER+AK RA + + + ++ KK+ Q VD D
Sbjct: 188 VRSKRLLERRAKNRRAPKSNDVDNEGYVPQKSNAKKKFK-QGVDTDDALQLFLWGPETKQ 246
Query: 265 XXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIF 324
EE EL IQ L+KLEK++ L + G +PT +WA G+ L+ ++ G
Sbjct: 247 LLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSEIHRGRS 306
Query: 325 CKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWW 384
+EK+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WW
Sbjct: 307 SREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWW 366
Query: 385 IKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRL 444
I+Q++RKS+ SRTIRLP ++ +V EARK E P E++A G+S ++L
Sbjct: 367 IRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHVGVSKEKL 426
Query: 445 SAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPR 504
+L + P S++Q I +Q+ E+ D E + KQ M+ + +L+ L+P+
Sbjct: 427 DKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIEIPTISVGKQLMRNHVRNLLNVLSPK 486
Query: 505 EKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
E+ +I+ RFG++ G+ ++L EIGE+ G+S+ER+RQ+ES A
Sbjct: 487 ERSIIKLRFGIEGGKQRSLSEIGEIYGLSKERVRQLESRAL 527
>B4WSK5_9SYNE (tr|B4WSK5) RNA polymerase sigma factor, cyanobacterial RpoD-like
family OS=Synechococcus sp. PCC 7335 GN=S7335_2811 PE=4
SV=1
Length = 298
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 183/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI L + +Q L+ L + L + +PT +WAA G+ + L + G K +M
Sbjct: 8 EEILLGKQVQKLMSLIAIHSSLVDTLDREPTRTEWAAAGGISEAELAAIVTAGEQAKHRM 67
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD SKG++FSTYA+WWI+QA+
Sbjct: 68 VEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAI 127
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++Q ++GR P E+A+ATG ++K++ L
Sbjct: 128 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQFTQQHGRTPTASEIAQATGFTIKQVREYLD 187
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ K+G NQ+ + +++ D + +T ++ +K DL++++ L P+++QVI
Sbjct: 188 RSRQPLSLDLKVGDNQDTQLGDLLED-DGQTPDDYATASSLKSDLKRIMADLTPQQQQVI 246
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG++DG+ TL +IG ML +SRER+RQIE A
Sbjct: 247 ALRFGLEDGKNMTLAKIGAMLDISRERVRQIEREAL 282
>G7L3V2_MEDTR (tr|G7L3V2) RNA polymerase sigma factor rpoD OS=Medicago truncatula
GN=MTR_7g101840 PE=4 SV=1
Length = 557
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 176/276 (63%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE +L IQDL KL++ + L G +PT A+WA G+ + L+KRL+ G K+K+
Sbjct: 262 EESQLIAQIQDLFKLKETKIKLQSHFGREPTLAEWADGVGLSCRDLQKRLHCGNRSKDKL 321
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I +N+RLV+ IAK YQG G++LQDL+QEG GL+R EKF G +FSTYA+WWI+Q +
Sbjct: 322 IHANLRLVVHIAKYYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFSTYAYWWIRQTI 381
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
R++L S+TIRLP + ++ EA+K E HP EE+A+ G+++ RL +L
Sbjct: 382 RRALFLHSKTIRLPENFYALLGKIAEAKKSYIKEGNLHPTKEEIAKRVGITVDRLEMLLF 441
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ + P S+E+ + + + E+ AD E + KQ M+ + +L L P+E++V+
Sbjct: 442 STRTPLSMERAVWADSDTTFQEITADSSIEIPNVCVAKQLMRSHVRNLLGILPPKERKVL 501
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R RFG++DG K+L EIG++LGV +ER+RQ+ES A
Sbjct: 502 RLRFGIEDGYEKSLTEIGKVLGVCKERVRQLESQAL 537
>D8UF26_VOLCA (tr|D8UF26) Putative uncharacterized protein OS=Volvox carteri
GN=VOLCADRAFT_109400 PE=4 SV=1
Length = 733
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 173/275 (62%), Gaps = 1/275 (0%)
Query: 271 EIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMI 330
E+E++E QD + LEK++ + +PT + AA G+D R + G+ KE ++
Sbjct: 420 ELEVTEMCQDFLFLEKVKRQCEKTLHRKPTNDECAAAVGMDVMAYNMRYDAGLKAKELLL 479
Query: 331 KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 390
KSN RLV+++ K Y G GM+LQDLV EG +GL+RG E +DAS+GF+F TYAHWWI+QAV
Sbjct: 480 KSNYRLVMTVCKRYIGKGMHLQDLVSEGVKGLLRGVEMYDASRGFRFGTYAHWWIRQAVS 539
Query: 391 KSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLT 450
+S+++ R +RLP HM+E ++K A L E R P EE+AEA GL R+ +L
Sbjct: 540 RSMAETGRAVRLPVHMIEQLTKLKNATAALAMELNREPSVEEMAEAVGLPPSRVELLLDA 599
Query: 451 PKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIR 510
+A S+E IG + L + + D E A+E M+ D+E +L+ L+ RE V+R
Sbjct: 600 ARAASSMESAIGGDDGLTIKDAVQD-ERMAADEAFGSDSMRADVESMLEGLSDREACVLR 658
Query: 511 WRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG++DG TL++IG LGV+RERIRQ+E+ A
Sbjct: 659 LRFGLEDGVEWTLEDIGSRLGVTRERIRQLEAKAL 693
>B4WG00_9SYNE (tr|B4WG00) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7335 GN=S7335_4199 PE=3 SV=1
Length = 319
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 182/276 (65%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+EI L + +Q L+KLE +++DL E +PT A+WA + + L+K + G K+KM
Sbjct: 28 QEITLGKTVQQLMKLEAIRDDLTETMDREPTLAEWAEATNLSPEALKKTVEIGQQAKDKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
++SN+RLV+SIAK Y+G+ +++ DL+QEG GL RG EKFD KG++FSTYA+WWI+QA+
Sbjct: 88 MRSNLRLVVSIAKKYRGSKLDMMDLIQEGSLGLCRGVEKFDPLKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++D RTIRLP H+ E ++++A++++ E GR EVAE L +++ +
Sbjct: 148 TRAIADTGRTIRLPIHINEKLSKIRKAQREVSLELGRPATVSEVAEKVSLPAEKVRELQR 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL +IG QN + ++ + ++++ EE + +K+D+ ++L L R+K VI
Sbjct: 208 QSRLPLSLNMRIGSEQNTELGALL-ESDSQSPEEYATQNLLKRDIGQLLARLTERQKDVI 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+DDG+ KTL +IG L +SRER+RQIE A
Sbjct: 267 SMRFGLDDGKKKTLAQIGHDLDISRERVRQIERKAL 302
>C7QVB1_CYAP0 (tr|C7QVB1) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 8802) GN=Cyan8802_3060
PE=4 SV=1
Length = 318
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q + LE L+E L E+ G +PT AQWA A + QK LR + G K KM
Sbjct: 28 EEILYAKRVQRFVALETLKESLTEELGQEPTIAQWAKAAKMTQKELRSAIEAGEAAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL E GR E+AE L+ +++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQEKGRAATIAELAEELELTPRQVREYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G NQ+ + +++ D ++ E+ ++ DL+++++ L P++K+V+
Sbjct: 208 RARQPLSLDLRVGDNQDTELGDLLEDT-GQSPEDYATHSSLQLDLDRLMEELTPQQKEVL 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+ DG+ TL +IG +L +SRER+RQIE A
Sbjct: 267 ALRFGLSDGKPLTLAKIGSILNISRERVRQIEREAL 302
>B7JX54_CYAP8 (tr|B7JX54) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_3061 PE=4
SV=1
Length = 318
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q + LE L+E L E+ G +PT AQWA A + QK LR + G K KM
Sbjct: 28 EEILYAKRVQRFVALETLKESLTEELGQEPTIAQWAKAAKMTQKELRSAIEAGEAAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL E GR E+AE L+ +++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQEKGRAATIAELAEELELTPRQVREYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G NQ+ + +++ D ++ E+ ++ DL+++++ L P++K+V+
Sbjct: 208 RARQPLSLDLRVGDNQDTELGDLLEDT-GQSPEDYATHSSLQLDLDRLMEELTPQQKEVL 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+ DG+ TL +IG +L +SRER+RQIE A
Sbjct: 267 ALRFGLSDGKPLTLAKIGSILNISRERVRQIEREAL 302
>B1XQ38_SYNP2 (tr|B1XQ38) Sigma factor OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rpoD PE=4 SV=1
Length = 318
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 185/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ S +Q ++ LEKL+ +LAEK +P+ +WA A + Q+ L+K+L G K+KM
Sbjct: 28 EEVLYSRRVQKMVNLEKLKAELAEKQDQEPSLKEWAQAANLSQRELKKQLLLGKQAKQKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y M+L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYIKRNMDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL NGR E+A+ GL+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQANGRSASIPELADELGLTTKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G N + + E++ D + T ++ +K+DL ++L+ L ++++V+
Sbjct: 208 KSRQPLSLDLRVGDNNDTELIELLED-DGLTPDDYATHAALKRDLARMLNDLTAQQQEVL 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+ DG TL +IGE L +SRER+RQIE A
Sbjct: 267 TLRFGLRDGTPHTLAKIGEHLSISRERVRQIEREAL 302
>F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomonas paramecium
GN=rpoD PE=4 SV=1
Length = 414
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 182/277 (65%), Gaps = 1/277 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV-DQKTLRKRLNYGIFCKEK 328
EEI+L+ I L++ E ++ L EK G +PT +W+A + D + + L KE+
Sbjct: 103 EEIQLAREISQLLQWEHIKVFLKEKLGREPTALEWSAACKISDVQKFKTVLYNSRKAKER 162
Query: 329 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 388
MI +N+RLV+SIAK Y GM+LQDLVQEG GL+R EKFD+ KGFKFSTYA WWIKQ+
Sbjct: 163 MIAANLRLVVSIAKRYSNRGMSLQDLVQEGSLGLIRATEKFDSEKGFKFSTYATWWIKQS 222
Query: 389 VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVL 448
V ++++D SRTIRLP H+ + +K+ + L E GR P +EE+A +++ +L +VL
Sbjct: 223 VSRAIADHSRTIRLPVHLYDTLSAIKKTTRILTIELGRSPTEEEIACKMDVTVDKLRSVL 282
Query: 449 LTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQV 508
+ + SLE+ I + + + + E+ +E + K ++ DL V++SL+ RE+ V
Sbjct: 283 QSAQPTLSLEKPIKNDGDTAQLSDFIEADQESPDEHVEKSMLRDDLRDVINSLSLRERDV 342
Query: 509 IRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
IR R+G+DDG+++TL+EIG++ V+RER+RQIE+ A
Sbjct: 343 IRMRYGLDDGKIRTLEEIGQIFSVTRERVRQIEAKAI 379
>K9YNZ9_CYASC (tr|K9YNZ9) RNA polymerase sigma factor OS=Cyanobacterium stanieri
(strain ATCC 29140 / PCC 7202) GN=Cyast_1868 PE=3 SV=1
Length = 328
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 183/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
+EI + +Q ++ L +E+LAE +PT +WA A L+K ++ G K+KM
Sbjct: 37 QEIVFGKQVQIMMSLYAQKEELAENLDREPTLEEWAQAAEKTPAELKKLIHQGKRAKQKM 96
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I++N+RLV++IAK YQ M DL+QEG GL RG EKFD +KGFKFSTYA+WWI+QA+
Sbjct: 97 IEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFDPTKGFKFSTYAYWWIRQAI 156
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++ Q+RTIRLP H+ E ++K+ +++L + GR P+ E+A A L ++
Sbjct: 157 TRAIAQQARTIRLPIHITEKLNKIKKTQRELSQKLGRSPNQSEIANALDLEPSQIREYFS 216
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ K+G NQ+ + SE++ D E + ++ + ++ M++DL K+LD L ++++V+
Sbjct: 217 IARQPISLDVKVGDNQDTELSELLED-EGLSPDKYITQELMRQDLHKLLDELTTQQQEVV 275
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R RFG+DDG+ +L +IG+ +G+SRER+RQ+E A
Sbjct: 276 RLRFGLDDGKELSLAKIGQRMGISRERVRQLEQQAL 311
>I4I200_MICAE (tr|I4I200) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9808 GN=rpoD PE=4 SV=1
Length = 318
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ K+G NQ+ + E++ DP + E+ ++ DLEK++ L P++K+VI
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDP-GLSPEDYTAYSSLQVDLEKLMADLTPQQKEVI 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 267 CLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>P96034_SYNSP (tr|P96034) Sigma factor OS=Synechococcus sp. GN=sigD PE=4 SV=1
Length = 317
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 184/276 (66%), Gaps = 2/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ S +Q ++ LEKL+ +LAEK +P+ +WA A + Q+ L+K+L G K+KM
Sbjct: 28 EEVLYSRRVQKMVNLEKLKAELAEKQDQEPSLKEWAQAANLSQRQLKKQLLLGKQAKQKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y M+L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYIKRNMDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
+++++QSRTIRLP H+ E ++K+A++QL NGR E+A+ GL+ K++ L
Sbjct: 148 TRAIAEQSRTIRLPIHITEKLNKIKKAQRQLAQANGRSASIPELADELGLTTKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G N + + E+ + + E ++ +K+DL ++L+ L ++++V+
Sbjct: 208 KSRQPLSLDLRVGDNNDTELIEL--EDDGELPDDYATHAALKRDLARMLNDLTAQQQEVL 265
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+ DG TL +IGE L +SRER+RQIE +
Sbjct: 266 TLRFGLRDGTPHTLAKIGEHLNISRERVRQIEHGSL 301
>I4H5M1_MICAE (tr|I4H5M1) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9807 GN=rpoD PE=4 SV=1
Length = 318
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 189/302 (62%), Gaps = 9/302 (2%)
Query: 248 DYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAV 307
+++DP EEI ++ +Q LI LEK++E L K G P+ QW+
Sbjct: 6 NHTDPVRAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEA 65
Query: 308 AGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 367
A + ++ LR+ L G F K KM+++N+RLV+S+AK Y ++L DL+QEG G+ RG E
Sbjct: 66 AEISEEQLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVE 125
Query: 368 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 427
KFD +KG++FSTYA+WWI+QA+ ++++++SRTIRLP H+ E ++K+A++QL + GR
Sbjct: 126 KFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRA 185
Query: 428 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEE 483
E+AE L+ K++ L + P SL+ K+G NQ+ + E++ D PE TA
Sbjct: 186 ATIAELAEELDLTPKQVRDYLERSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAHS 245
Query: 484 QLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESC 543
L + DLEK++ L P++K+VI RFG+D+G+ TL +IG L +SRER+RQIE
Sbjct: 246 SL-----QVDLEKLMADLTPQQKEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIERE 300
Query: 544 AF 545
A
Sbjct: 301 AI 302
>M1BY21_SOLTU (tr|M1BY21) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 311
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 181/276 (65%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE EL IQ +KL++++ L + +PT +WA AG+ + L+ +L G +EK+
Sbjct: 16 EESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKL 75
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I +N+R+V+ IAK YQG G+NLQDL+QEG GL++ EKF G +F TYA+WWI+Q+V
Sbjct: 76 INANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSV 135
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
RK++ SRTIRLP ++ +VK+A+K+ + R+P E++A G+S++RL +L
Sbjct: 136 RKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVERLQNLLS 195
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P S++Q + +Q+ E+ AD E E + KQ M++ + +L+ L+P+E+++I
Sbjct: 196 NVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKII 255
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R RFG+ DG+ K+L EIG + G+S+ER+RQ+E+ A
Sbjct: 256 RLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRAL 291
>L8NM63_MICAE (tr|L8NM63) RNA polymerase sigma factor rpoD2 OS=Microcystis
aeruginosa DIANCHI905 GN=rpoD2 PE=4 SV=1
Length = 318
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAHSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>A8YAB5_MICAE (tr|A8YAB5) Genome sequencing data, contig C249 OS=Microcystis
aeruginosa PCC 7806 GN=IPF_6533 PE=4 SV=1
Length = 318
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAHSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4ISK0_MICAE (tr|I4ISK0) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9701 GN=rpoD PE=4 SV=1
Length = 318
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLKAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4G0I4_MICAE (tr|I4G0I4) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9443 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 189/302 (62%), Gaps = 9/302 (2%)
Query: 248 DYSDPXXXXXXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAV 307
+++DP EEI ++ +Q LI LEK++E L K G P+ QW+
Sbjct: 6 NHTDPVRAYLREIGRVPLLSHEEEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEA 65
Query: 308 AGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 367
A + ++ LR+ L G F K KM+++N+RLV+S+AK Y ++L DL+QEG G+ RG E
Sbjct: 66 AEISEEQLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVE 125
Query: 368 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 427
KFD +KG++FSTYA+WWI+QA+ ++++++SRTIRLP H+ E ++K+A++QL + GR
Sbjct: 126 KFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRA 185
Query: 428 PDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEE 483
E+AE L+ K++ L + P SL+ K+G NQ+ + E++ D PE TA
Sbjct: 186 ATIAELAEELDLTPKQVRDYLERSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYS 245
Query: 484 QLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESC 543
L + DLEK++ L P++K+VI RFG+D+G+ TL +IG L +SRER+RQIE
Sbjct: 246 SL-----QVDLEKLMADLTPQQKEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIERE 300
Query: 544 AF 545
A
Sbjct: 301 AI 302
>L7E3E5_MICAE (tr|L7E3E5) RNA polymerase sigma factor OS=Microcystis aeruginosa
TAIHU98 GN=rpoD-1 PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4HQ77_MICAE (tr|I4HQ77) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9809 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G +P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGREPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4GLZ5_MICAE (tr|I4GLZ5) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 7941 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4FRP5_MICAE (tr|I4FRP5) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9717 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G +P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGREPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4FIK9_MICAE (tr|I4FIK9) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9432 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>K2EUZ1_9BACT (tr|K2EUZ1) RNA polymerase sigma factor OS=uncultured bacterium
GN=ACD_20C00407G0008 PE=3 SV=1
Length = 364
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 159/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +G+KFSTYA
Sbjct: 123 GQIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGYKFSTYA 182
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L + R P +EE+AEA +++
Sbjct: 183 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKITRKLAQDLSRKPTEEEIAEAMAITI 242
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + +++DL +VL SL
Sbjct: 243 NKLREIIKVAQEPLSLETPIGKEEDSRLGDFIEDKEADAPVMTVAHELLREDLAEVLSSL 302
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 303 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 346
>B0JTP4_MICAN (tr|B0JTP4) Group 2 RNA polymerase sigma factor OS=Microcystis
aeruginosa (strain NIES-843) GN=sigD PE=4 SV=1
Length = 318
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLKVKLGSDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>R5SI72_9GAMM (tr|R5SI72) RNA polymerase sigma factor OS=Acinetobacter sp.
CAG:196 GN=BN527_00017 PE=4 SV=1
Length = 363
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 159/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 122 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 181
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L E R P +EE+A G+S+
Sbjct: 182 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRRLAQELSRKPTEEELASEMGVSI 241
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +++DL +VL +L
Sbjct: 242 SKLREIVKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPIKTVASELLREDLAEVLCTL 301
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 302 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 345
>K4A7Y8_SETIT (tr|K4A7Y8) Uncharacterized protein OS=Setaria italica
GN=Si034994m.g PE=4 SV=1
Length = 554
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 201/344 (58%), Gaps = 2/344 (0%)
Query: 203 ITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEV-DYSDPXXXXXXXXX 261
+ RS R ER++K+ + + +++ S ++K V D +P
Sbjct: 192 VFVRSKRLLERRSKKRKVPRALSNDVLCSVVNSKKKEKPKKFGRVLDPDEPFKLFLRDRE 251
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE ++ IQ+L+KLE+ Q L +CG +PT A+WAA G+ + L+ +
Sbjct: 252 TTEFLTAKEEKQMFSQIQNLMKLEEAQRKLEVQCGREPTVAEWAAAVGMSCRELQSSIRI 311
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G C+EKM +SN RLVI +A+ Y+G G+++QDLVQ+GC GL++ EKF+ SKG +F TYA
Sbjct: 312 GRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCCGLMKTFEKFNPSKGCRFPTYA 371
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
+WWI+Q+++KS+ SR IRLP + +V +AR + E G P +E VA G+++
Sbjct: 372 YWWIRQSIKKSIFKNSRLIRLPESVFALLRKVGKARLECIME-GEQPTNENVARRAGITI 430
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
++L+ + + PRS++ ++ + + E+ DP E E + + M++ + L L
Sbjct: 431 EKLARLRAKTRKPRSMQDRVWSDDGVTYQEITEDPNFEPPELSVDRLMMRQQVRNFLAIL 490
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PREK++I RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 491 SPREKEIIEHRFGIHDGEPKTLHVIGDMYGLSKERIRQVQNKAL 534
>Q39515_CYACA (tr|Q39515) Chloroplast RNA polymerase sigma subunit OS=Cyanidium
caldarium GN=sigA PE=4 SV=1
Length = 591
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/280 (44%), Positives = 180/280 (64%), Gaps = 6/280 (2%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV--DQKTLRKRLNYGIFCKE 327
EEIELS+ + L+ LE+ Q E+ G PT ++WA G D + LR+ + G KE
Sbjct: 295 EEIELSKQVCILMDLEQFQRSFREEHGKSPTESEWAQGCGYGDDVEKLREHIRDGRKAKE 354
Query: 328 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 387
+M+ +N+RLV+SIAK Y G+ LQDL+QEG GL+RG EKFDA +GF+FSTYA WWI+Q
Sbjct: 355 RMVTANLRLVVSIAKRYSNRGVALQDLIQEGSIGLIRGVEKFDAERGFRFSTYATWWIRQ 414
Query: 388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAV 447
++ +++SD SR+IRLP H+ + +++ K L E GR P +EE+ E+ G+ + V
Sbjct: 415 SITRAISDSSRSIRLPVHVHDTISLIRKQTKALQVELGRPPSEEEICESVGIDRAKYRLV 474
Query: 448 LLTPKAPRSLEQKI--GINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ + SLE + G + + +IA PE E AEE + +++ +EKVL L+ RE
Sbjct: 475 MECSRNIVSLETPLRSGDDVHFLGESLIA-PE-ERAEENCSRDTLRESIEKVLHCLSTRE 532
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
++VIR RFG+ DGR +TL+E+G V+RERIRQIES A
Sbjct: 533 REVIRMRFGLTDGRPRTLEEVGSRFNVTRERIRQIESKAL 572
>I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Microcystis sp.
T1-4 GN=rpoD PE=4 SV=1
Length = 318
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 185/280 (66%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L + G +P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRSQLGREPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RSRQPLSLDLKVGDNQDTELGELLEDTGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>I4GS23_MICAE (tr|I4GS23) RNA polymerase sigma factor rpoD3 OS=Microcystis
aeruginosa PCC 9806 GN=rpoD PE=4 SV=1
Length = 318
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 184/280 (65%), Gaps = 9/280 (3%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q LI LEK++E L K G P+ QW+ A + ++ LR+ L G F K KM
Sbjct: 28 EEILYAKQVQRLIFLEKIKESLRAKLGRDPSDRQWSEAAEISEEQLRRELGAGDFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQDKGRAATIAELAEELDLTPKQVRDYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIAD----PEAETAEEQLIKQFMKKDLEKVLDSLNPRE 505
+ P SL+ K+G NQ+ + E++ D PE TA L + DLEK++ L P++
Sbjct: 208 RARQPLSLDLKVGDNQDTELGELLEDKGLSPEDYTAYSSL-----QVDLEKLMADLTPQQ 262
Query: 506 KQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
K+VI RFG+D+G+ TL +IG L +SRER+RQIE A
Sbjct: 263 KEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIEREAI 302
>R6PFH1_9CLOT (tr|R6PFH1) RNA polymerase sigma factor OS=Clostridium sp. CAG:306
GN=BN597_01567 PE=4 SV=1
Length = 358
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 159/226 (70%)
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
N G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +G+KFST
Sbjct: 115 NVGAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGYKFST 174
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
YA WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L E R P ++E+A+ +
Sbjct: 175 YATWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRKLAQELSRKPTEDELAQEMNI 234
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
S+ +L ++ + P SLE IG ++ + + I D +A+ + + + +++DL +VL
Sbjct: 235 SISKLREIIKVAQEPLSLETPIGKEEDSRLGDFIEDKDADAPVKTVAHELLREDLAEVLS 294
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 295 GLSPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 340
>K9QYS3_NOSS7 (tr|K9QYS3) RNA polymerase sigma factor, cyanobacterial RpoD-like
family OS=Nostoc sp. (strain ATCC 29411 / PCC 7524)
GN=Nos7524_4870 PE=4 SV=1
Length = 318
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 185/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI + +Q L++++EDLA K QPT +WA A +D L + + G F K KM
Sbjct: 28 EEIFYGKQVQRSSSLQEVREDLASKLDRQPTLEEWAKAAELDIAELNEAIADGEFAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
+++++++RTIRLP H+ E ++K+A++QL GR P E+A L+ K++ L
Sbjct: 148 TRAIAEKARTIRLPIHITEKLNKIKKAQRQLSQRLGRAPSASELASELELTPKQVREYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G N + + E++ DP A + EE +++ + DLE++++ L P++++VI
Sbjct: 208 KARLPLSLDLRLGDNYDTELGEMLEDPGA-SPEEFVMQSSLSYDLERLMEQLTPQQREVI 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+ RFG+ DG+ TL +IGE+L +SRER+RQIE A
Sbjct: 267 KLRFGLMDGQALTLAKIGEILNISRERVRQIEREAL 302
>M1V5C7_CYAME (tr|M1V5C7) Sigma subunit for chloroplast RNA polymerase
OS=Cyanidioschyzon merolae strain 10D GN=CYME_CMK044C
PE=4 SV=1
Length = 721
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 179/279 (64%), Gaps = 4/279 (1%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGV--DQKTLRKRLNYGIFCKE 327
EE+ELS + L+ LE+ Q+ E+ G PT +WA G D + LRK + G KE
Sbjct: 425 EEVELSRQVCVLMDLERFQKSFREQHGKSPTELEWARGCGYGEDVEALRKHIRDGRSAKE 484
Query: 328 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 387
+M+ +N+RLV+SIAK Y G+ LQDL+QEG GL+RG EKFDA +GF+FSTYA WWI+Q
Sbjct: 485 RMVTANLRLVVSIAKRYSNRGVALQDLIQEGSIGLIRGVEKFDAGRGFRFSTYATWWIRQ 544
Query: 388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAV 447
++ +++SD SR+IRLP H+ + +++ K L+++ GR P ++E+ E+ G+ + + +
Sbjct: 545 SITRAISDSSRSIRLPVHVHDTISMIRKHTKALHTQLGRPPREDEICESVGIDIAKYRLI 604
Query: 448 LLTPKAPRSLEQKI-GINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREK 506
+ + SLE + G + E + PE E +E+ + + ++ +EKVL L RE+
Sbjct: 605 MECSQNIVSLETPMHGTDDIHNLGESLISPE-ERSEDTVSRDTLRDSIEKVLRCLTARER 663
Query: 507 QVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+VIR RFG+ DGR +TL+E+G V+RERIRQIES A
Sbjct: 664 EVIRMRFGLADGRPRTLEEVGVKFNVTRERIRQIESKAL 702
>B0C890_ACAM1 (tr|B0C890) RNA polymerase sigma-70 factor OS=Acaryochloris marina
(strain MBIC 11017) GN=rpoD PE=4 SV=1
Length = 318
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 187/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE+ + +Q LIKL+ ++++LAE+ QP A+W+A A + + L+K L+ G K KM
Sbjct: 28 EEVTFGKQVQHLIKLQTIRDELAEQLERQPNDAEWSAAAKLSEAELQKALHEGEAAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++ RTIRLP H+ E ++K+ ++QL + GR E+A + L+ K++ L
Sbjct: 148 TRAIAEKGRTIRLPIHITEKLNKIKKTQRQLSQKLGRAATISELATSLDLTTKQVREYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G NQ+ + E+I DP +E+ E ++ ++ DLE+++ L +++QV+
Sbjct: 208 RARQPLSLDVRVGDNQDTELGELIEDP-SESPENFTLQASLRGDLERLMADLTDQQQQVL 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+DDG+ TL +IG+ L +SRER+RQIE A
Sbjct: 267 HLRFGLDDGQPLTLAKIGDRLSISRERVRQIEREAL 302
>J3MRH6_ORYBR (tr|J3MRH6) Uncharacterized protein OS=Oryza brachyantha
GN=OB08G17050 PE=4 SV=1
Length = 577
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 198/344 (57%), Gaps = 2/344 (0%)
Query: 203 ITARSSRQTERKAKRVRATEKATTNI-VSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXXX 261
+ RS+R ER++KR A A T++ S + K + + +D +P
Sbjct: 215 VFIRSTRSLERRSKRRIAPRAAITDVSCSVDNSKKKEKSKKYGRVLDPDEPFRLFLRDRE 274
Query: 262 XXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNY 321
EE L IQ L+KLE+ L +CG +PT A+WA G+ K L+ +
Sbjct: 275 TTEFLTAKEERHLFSKIQILMKLEEAHRKLEVQCGREPTLAEWAEAVGMSSKELQSSIRT 334
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G C+EKM +SN RLVI +A+ Y+G G+++QDLVQ+GC GL++ EKF+ SKG +F TYA
Sbjct: 335 GRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCCGLMKTFEKFNPSKGCRFPTYA 394
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
+WWI+Q+++KS+ SR IRLP + +V +AR + E G P + VA G+++
Sbjct: 395 YWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIME-GEQPTNANVARRAGITI 453
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
++L+ + + PRS++ + ++ + E+ DP E + + + M++ + L L
Sbjct: 454 EKLAKLRAKTRKPRSMQDHVWSDEGVTFQEITEDPNVEPPDLSVDRMMMRQQVRDFLGIL 513
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PREK++I RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 514 SPREKEIIEHRFGIHDGEPKTLHVIGDMFGLSKERIRQLQNRAL 557
>M0SK23_MUSAM (tr|M0SK23) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 570
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 206/347 (59%), Gaps = 4/347 (1%)
Query: 201 NSITARSSRQTERKAKRVRATEKAT--TNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXX 258
S S ++ +RK +R RA EKA+ ++ F G K+ + +++
Sbjct: 208 GSTIVHSGKKEKRKLRRARAMEKASKMSSPQIFSKGRHLLKRSLLLEKT--VSRKLLGHF 265
Query: 259 XXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKR 318
E E+S G++++ LEK+ ++L E+ G P++ +WA AGVD +TL+ R
Sbjct: 266 ESENRREVIARNESEMSMGVKEIANLEKICKELEEEIGRPPSYTRWAEAAGVDMRTLQWR 325
Query: 319 LNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 378
L +G +C++ +IKS LV+ IAKNY+G G+ DL+Q G G++ GAE+FD KG +FS
Sbjct: 326 LQFGWYCRDTLIKSTRSLVMFIAKNYRGMGIAFDDLLQAGYVGVLNGAERFDMKKGNRFS 385
Query: 379 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATG 438
TY +WI++++ ++ SR I++P M R+++AR+ Y+ GR P DEE+A+ TG
Sbjct: 386 TYVQYWIRKSILAMVARHSRMIQVPVRMESMIKRIQKARRTHYNREGRQPQDEEIAKLTG 445
Query: 439 LSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVL 498
LS+ ++ +A S+EQ+I K E+IAD T +E + KQ +++D +L
Sbjct: 446 LSLAKVRLASKCSRAVGSIEQEIRDGWRTKFREIIADASVGTPDEVIEKQHLRQDALNLL 505
Query: 499 DSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+L+PRE+QV+ R+G++DG K+L+E+G + V++E IR+IE A+
Sbjct: 506 QTLHPRERQVLALRYGLEDGSCKSLEEVGRLCHVTKEWIRKIEKEAW 552
>B4FJ30_MAIZE (tr|B4FJ30) SIGMA70-like transcription factor OS=Zea mays PE=2 SV=1
Length = 541
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 204/346 (58%), Gaps = 3/346 (0%)
Query: 201 NSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQEVDYSDPXXXXXXXX 260
+ + RS+R ER++K+ +A N V+ SG S++K + +D +P
Sbjct: 178 DQVFIRSTRLLERRSKKRNGGHRALDNGVAC-SGVNSKRKDKFGRVLDPDEPFRLFLRDR 236
Query: 261 XXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLN 320
EE ++ IQ+L+KLE Q +L +CG +PT +WA G+ + L+ +
Sbjct: 237 ETTEFLTAKEEKQMFSQIQNLMKLEGAQRNLQAQCGREPTVEEWAQAVGMSCRELQSCVR 296
Query: 321 YGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 380
G C+EKM +SN RLVI +A+ Y+G G+++QDLVQ+GC GL++ EKF+ SKG +F TY
Sbjct: 297 TGRRCREKMARSNFRLVIHVARKYEGCGLDIQDLVQDGCCGLMKTFEKFNPSKGCRFPTY 356
Query: 381 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLS 440
A+WWI+Q+++KS+ SR IRLP + +V +AR + +G P +E VA G++
Sbjct: 357 AYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIM-DGEQPTNEVVARRAGIT 415
Query: 441 MKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDS 500
+++L+ + + RS++ ++ + + E+ DP E E + + M++ + L
Sbjct: 416 IEKLAKLRAKTRKVRSMQDRVWSDDGVTYQEITEDPNIEGPEVSVDRLMMRQQVRSFLTG 475
Query: 501 -LNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+PREK++I RFG+ DG+ KTL IG+M G+S+ERIRQ+++ A
Sbjct: 476 ILSPREKEIIEHRFGIHDGQPKTLHVIGDMYGLSKERIRQVQNKAL 521
>M0WB57_HORVD (tr|M0WB57) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 553
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 204/346 (58%), Gaps = 4/346 (1%)
Query: 203 ITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQE---VDYSDPXXXXXXX 259
+ RS+R ER++K+ +T+ V S + S+KK P + + +P
Sbjct: 186 VFIRSTRLLERRSKKRNVPRASTSTDVVQCSVADSKKKDRPKKYGRVLGPDEPFRLFLRD 245
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE L IQ+L++LE+ Q L E+CG +PT +WA G+ K L+ +
Sbjct: 246 RETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPTLPEWAQAVGMSCKDLQSSI 305
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
+ G C+EKM +SN RLVI +A+ YQG G++++DLVQ+GC GL++ EKF+ SKG +F T
Sbjct: 306 HIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCRFPT 365
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
YA+WWI+QA++KS+ SR IRLP + +V +AR + E G P ++ VA G+
Sbjct: 366 YAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLECILE-GEQPTNQNVARRAGI 424
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
S+++L+ + + PRS++ ++ N + E+ DP ++ + + + M++ + + L
Sbjct: 425 SIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDSPDLVVDRIMMRQQVREFLG 484
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+ REK+++ RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 485 ILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQLQNRAL 530
>B5IIC6_9CHRO (tr|B5IIC6) RNA polymerase sigma factor OS=Cyanobium sp. PCC 7001
GN=CPCC7001_780 PE=3 SV=1
Length = 327
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 170/265 (64%), Gaps = 2/265 (0%)
Query: 281 LIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKMIKSNIRLVISI 340
L +L + +E+L + GD A WA GV LR+ L+ G KE+M+++N+RLV+++
Sbjct: 43 LARLVQEREELLRQRGDGELTA-WAGRCGVPPADLRQALHRGRRAKERMLQANLRLVVAV 101
Query: 341 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 400
AK YQ G++L DL+QEG GL R E++D +GF+FSTYA+WWI+Q + ++L+ QSRTI
Sbjct: 102 AKKYQRRGLDLLDLIQEGTLGLERAVERYDPRRGFRFSTYAYWWIRQGITRALASQSRTI 161
Query: 401 RLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQK 460
RLP H+ E R++ + +L E+GR P E+A A GL RL + L P SLE +
Sbjct: 162 RLPVHVTETLNRIRTCQGELTREHGRQPTLAELARAVGLDEARLRSTLAHIPRPVSLEGR 221
Query: 461 IGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRM 520
+G N + +++ D A T E+ L +Q + DLE +LD L+ RE VIR RFG+DD
Sbjct: 222 VGANADTPLVDLLEDDHA-TPEQTLTRQQLHADLEALLDELSAREATVIRQRFGLDDDTP 280
Query: 521 KTLQEIGEMLGVSRERIRQIESCAF 545
+TL EIGE L +SRER+RQIES A
Sbjct: 281 RTLAEIGEQLQLSRERVRQIESRAL 305
>I3SER7_LOTJA (tr|I3SER7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
Length = 311
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 177/276 (64%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EE +L IQ+L +LE+++ L + G +PT A+WA G+ L+ +L G KEK+
Sbjct: 16 EESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKL 75
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I +N+R+V+ +AKNY G G++ QDL+QEG GL++ EKF G +F++YA+WWI+Q +
Sbjct: 76 IHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTI 135
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
R++L SRTIRLP ++ ++ EA+K E HP EE+A G+++ +L +L
Sbjct: 136 RRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLS 195
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P S++Q + +Q+ E+ AD ET + + KQ M++ +L +LNPRE+++I
Sbjct: 196 AARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRII 255
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R RFG++DG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 256 RLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRAL 291
>R7LWC5_9FUSO (tr|R7LWC5) RNA polymerase sigma factor OS=Fusobacterium sp.
CAG:815 GN=BN791_00873 PE=4 SV=1
Length = 365
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 158/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 125 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 184
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L + R P ++E+A +S+
Sbjct: 185 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRKLAQDLSRKPTEDELAAEMNVSI 244
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +K+DL +VL +L
Sbjct: 245 SKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPVKMVASELLKEDLAEVLCTL 304
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 305 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 348
>M0WB53_HORVD (tr|M0WB53) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 550
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 204/346 (58%), Gaps = 4/346 (1%)
Query: 203 ITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQE---VDYSDPXXXXXXX 259
+ RS+R ER++K+ +T+ V S + S+KK P + + +P
Sbjct: 183 VFIRSTRLLERRSKKRNVPRASTSTDVVQCSVADSKKKDRPKKYGRVLGPDEPFRLFLRD 242
Query: 260 XXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRL 319
EE L IQ+L++LE+ Q L E+CG +PT +WA G+ K L+ +
Sbjct: 243 RETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPTLPEWAQAVGMSCKDLQSSI 302
Query: 320 NYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST 379
+ G C+EKM +SN RLVI +A+ YQG G++++DLVQ+GC GL++ EKF+ SKG +F T
Sbjct: 303 HIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCRFPT 362
Query: 380 YAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGL 439
YA+WWI+QA++KS+ SR IRLP + +V +AR + E G P ++ VA G+
Sbjct: 363 YAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLECILE-GEQPTNQNVARRAGI 421
Query: 440 SMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLD 499
S+++L+ + + PRS++ ++ N + E+ DP ++ + + + M++ + + L
Sbjct: 422 SIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDSPDLVVDRIMMRQQVREFLG 481
Query: 500 SLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L+ REK+++ RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 482 ILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQLQNRAL 527
>R7MFB1_9CLOT (tr|R7MFB1) RNA polymerase sigma factor OS=Clostridium sp. CAG:813
GN=BN790_01403 PE=4 SV=1
Length = 365
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 158/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 125 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 184
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L + R P ++E+A +S+
Sbjct: 185 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRKLAQDLSRKPTEDELAAEMNVSI 244
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +K+DL +VL +L
Sbjct: 245 SKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPVKMVASELLKEDLAEVLCTL 304
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 305 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 348
>M0WB51_HORVD (tr|M0WB51) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 515
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 205/349 (58%), Gaps = 4/349 (1%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQE---VDYSDPXXXX 256
+ + RS+R ER++K+ +T+ V S + S+KK P + + +P
Sbjct: 145 NGQVFIRSTRLLERRSKKRNVPRASTSTDVVQCSVADSKKKDRPKKYGRVLGPDEPFRLF 204
Query: 257 XXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLR 316
EE L IQ+L++LE+ Q L E+CG +PT +WA G+ K L+
Sbjct: 205 LRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPTLPEWAQAVGMSCKDLQ 264
Query: 317 KRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK 376
++ G C+EKM +SN RLVI +A+ YQG G++++DLVQ+GC GL++ EKF+ SKG +
Sbjct: 265 SSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCR 324
Query: 377 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEA 436
F TYA+WWI+QA++KS+ SR IRLP + +V +AR + E G P ++ VA
Sbjct: 325 FPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLECILE-GEQPTNQNVARR 383
Query: 437 TGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEK 496
G+S+++L+ + + PRS++ ++ N + E+ DP ++ + + + M++ + +
Sbjct: 384 AGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDSPDLVVDRIMMRQQVRE 443
Query: 497 VLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L L+ REK+++ RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 444 FLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQLQNRAL 492
>M0RSY5_MUSAM (tr|M0RSY5) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 579
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 208/345 (60%), Gaps = 5/345 (1%)
Query: 204 TARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPV-QEVDYSDPXXXXXXXXXX 262
T RS + ER++K+ R K N V + S + + + + +D +DP
Sbjct: 217 TVRSRKLLERRSKK-RKVSKNPNNFVHHGASSVTINQSKKIDKRLDSNDPLRLFLWGPET 275
Query: 263 XXXXXXXEEIELSEGIQ--DLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLN 320
EE +L I+ DL++LE+++E L + +PT A+WA G+ + L+ L+
Sbjct: 276 KQLLTVKEEKDLFVKIEACDLMRLEEVKERLQSQSDREPTLAEWAQAVGMSCQDLQSCLS 335
Query: 321 YGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 380
G +EKMI +N RLV+ +A+ Y+G G+N+QDL+QEG RGL++ EKF G +F TY
Sbjct: 336 SGRRNREKMIYANFRLVVHVARQYEGKGLNIQDLLQEGSRGLMKSLEKFKPRAGCRFPTY 395
Query: 381 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLS 440
A+WWI+Q+++K++ SRTIRLP + ++EAR+ L + G P +EE+A+ G++
Sbjct: 396 AYWWIRQSIKKAIFKNSRTIRLPENAFARLKSIREARR-LCIQEGLLPTNEEIAKRVGIT 454
Query: 441 MKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDS 500
+++L +LL + P S+++ ++Q++ E +ADP+ E + + KQ M++ + +L+
Sbjct: 455 VQKLEILLLNSRYPISIQRHPWLDQDVTFQETVADPKIEIPDLVIAKQMMRQHVRNLLNI 514
Query: 501 LNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L PRE+ ++++RFG+ K+L EIG M G+S+ER+RQ+ES A
Sbjct: 515 LKPRERVIVQYRFGIRCSEQKSLSEIGAMYGLSKERVRQLESQAL 559
>K9XV83_STAC7 (tr|K9XV83) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437)
GN=Sta7437_2939 PE=4 SV=1
Length = 318
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI ++ +Q IK+EK++E L +K G++PT +QWA A + + LR + G K KM
Sbjct: 28 EEILYAKRVQQQIKVEKIKESLQDKLGEEPTESQWADAAEITVEELRNIIQAGEAAKRKM 87
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 88 VEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 147
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++ RTIRLP H+ E ++K+A++QL + GR E+AE L+ K++ L
Sbjct: 148 TRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQQKGRTATISELAEELELTPKQVREYLE 207
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G N + + +++ D A + E+ ++KDL+K++ L P++++VI
Sbjct: 208 KSRQPISLDVRVGDNNDTELGDMLEDTGA-SPEDYATYSSLRKDLDKLMTDLTPQQREVI 266
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
RFG+ DG+ TL +IG+ L +SRER+RQIE A
Sbjct: 267 SLRFGLSDGKPLTLAKIGDCLNISRERVRQIEREAL 302
>L8L915_9CYAN (tr|L8L915) RNA polymerase sigma factor, cyanobacterial RpoD-like
family OS=Leptolyngbya sp. PCC 6406
GN=Lep6406DRAFT_00023770 PE=4 SV=1
Length = 317
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 183/276 (66%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI L + +Q L LEK +E L E+ PT A+WAA + + L + G K +M
Sbjct: 27 EEIVLGKQVQHLSLLEKRREALTEELDRTPTQAEWAAAVNLSEGQLLTIVRAGDTAKRRM 86
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
+++N+RLV+S+AK Y ++L DL+QEG G+ RG EKFD +KG++FSTYA+WWI+QA+
Sbjct: 87 VEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 146
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++++SRTIRLP H+ E ++K+A++QL + GR E+A L+ K++ L
Sbjct: 147 TRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQQYGRAATVMELAAELELTPKQVRDYLE 206
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G NQ+ + SE++ D E + EE + +++DL++++ L P+++QV+
Sbjct: 207 KARQPLSLDLRVGDNQDTELSELLED-EGPSPEEFATQAALRRDLDRLMGDLTPQQQQVL 265
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R RFG+ DG+ TL +IGEML +SRER+RQIE A
Sbjct: 266 RLRFGLTDGQTLTLAKIGEMLSISRERVRQIEREAL 301
>M0WB48_HORVD (tr|M0WB48) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 397
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 205/349 (58%), Gaps = 4/349 (1%)
Query: 200 SNSITARSSRQTERKAKRVRATEKATTNIVSFKSGSTSRKKRVPVQE---VDYSDPXXXX 256
+ + RS+R ER++K+ +T+ V S + S+KK P + + +P
Sbjct: 27 NGQVFIRSTRLLERRSKKRNVPRASTSTDVVQCSVADSKKKDRPKKYGRVLGPDEPFRLF 86
Query: 257 XXXXXXXXXXXXXEEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLR 316
EE L IQ+L++LE+ Q L E+CG +PT +WA G+ K L+
Sbjct: 87 LRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPTLPEWAQAVGMSCKDLQ 146
Query: 317 KRLNYGIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK 376
++ G C+EKM +SN RLVI +A+ YQG G++++DLVQ+GC GL++ EKF+ SKG +
Sbjct: 147 SSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCR 206
Query: 377 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEA 436
F TYA+WWI+QA++KS+ SR IRLP + +V +AR + E G P ++ VA
Sbjct: 207 FPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLECILE-GEQPTNQNVARR 265
Query: 437 TGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEK 496
G+S+++L+ + + PRS++ ++ N + E+ DP ++ + + + M++ + +
Sbjct: 266 AGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDSPDLVVDRIMMRQQVRE 325
Query: 497 VLDSLNPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
L L+ REK+++ RFG+ DG KTL IG+M G+S+ERIRQ+++ A
Sbjct: 326 FLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQLQNRAL 374
>R5KAK5_9CLOT (tr|R5KAK5) RNA polymerase sigma factor OS=Clostridium sp. CAG:967
GN=BN819_00160 PE=4 SV=1
Length = 365
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 158/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 124 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 183
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L E R P ++E+A +S+
Sbjct: 184 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRRLAQELSRKPTEDELAIEMNVSI 243
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +++DL +VL +L
Sbjct: 244 PKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPIKTVASELLREDLAEVLCTL 303
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 304 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 347
>B5W8F6_SPIMA (tr|B5W8F6) RNA polymerase sigma factor OS=Arthrospira maxima
CS-328 GN=AmaxDRAFT_5056 PE=3 SV=1
Length = 332
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 186/276 (67%), Gaps = 1/276 (0%)
Query: 270 EEIELSEGIQDLIKLEKLQEDLAEKCGDQPTFAQWAAVAGVDQKTLRKRLNYGIFCKEKM 329
EEI + +Q ++ L +++++L ++ PT A+W+A AG+ + + + +N G K+KM
Sbjct: 42 EEIIYGKKVQQMMSLLEMRDELTKELDHDPTAAEWSAKAGLSESEMTEIMNRGRRAKQKM 101
Query: 330 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 389
I++N+RLV+SIAK YQ M DL+QEG GL RG EKFD +G+KFSTYA+WWI+QA+
Sbjct: 102 IEANLRLVVSIAKKYQKRNMEFLDLIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAI 161
Query: 390 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVLL 449
++++ SRTIRLP H+ E ++K +++L+ + GR+ E+A+A L ++ LL
Sbjct: 162 TRAIAQNSRTIRLPIHITEKLNKIKRVQRELFQQYGRNATPTEIAKALDLEPSQIRDYLL 221
Query: 450 TPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVI 509
+ P SL+ ++G NQ+ + +++ D E+ +A+ + +Q +++DL+ ++ L P++++V+
Sbjct: 222 ASRHPVSLDLRVGDNQDTELQDLLED-ESASADNYVTQQLLRQDLKDLMADLTPQQREVL 280
Query: 510 RWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
R+G++DG+ +L ++G + +SRER+RQ+E+ A
Sbjct: 281 TLRYGLNDGKEMSLSKVGVHMNISRERVRQLENQAL 316
>R5DIT0_9CLOT (tr|R5DIT0) RNA polymerase sigma factor OS=Clostridium sp. CAG:715
GN=BN763_01066 PE=4 SV=1
Length = 363
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 158/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 122 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 181
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L E R P ++E+A +S+
Sbjct: 182 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRRLAQELSRKPTEDELAIEMNVSI 241
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +++DL +VL +L
Sbjct: 242 PKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPIKTVASELLREDLAEVLCTL 301
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 302 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 345
>R7JBT1_9FUSO (tr|R7JBT1) RNA polymerase sigma factor OS=Fusobacterium sp.
CAG:439 GN=BN657_00459 PE=4 SV=1
Length = 366
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 158/224 (70%)
Query: 322 GIFCKEKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 381
G K K++++N+RLV+SIAK Y G GM DL+QEG GL+R AEKFD +GFKFSTYA
Sbjct: 125 GAIAKRKLVQANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIRAAEKFDHERGFKFSTYA 184
Query: 382 HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSM 441
WWI+QA+ ++++DQ+RTIR+P HMVE ++K+ ++L E R P ++E+A +S+
Sbjct: 185 TWWIRQAITRAIADQARTIRIPVHMVETINKLKKVTRRLAQELSRKPTEDELAIEMNVSI 244
Query: 442 KRLSAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSL 501
+L ++ + P SLE IG ++ + + I D EA+ + + + +++DL +VL +L
Sbjct: 245 PKLREIIKIAQEPLSLETPIGKEEDSRLGDFIEDKEADAPIKTVASELLREDLAEVLCTL 304
Query: 502 NPREKQVIRWRFGMDDGRMKTLQEIGEMLGVSRERIRQIESCAF 545
+PRE+ V+R RFGMDDGR +TL+E+G++ GV+RERIRQIE+ A
Sbjct: 305 SPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKAL 348