Miyakogusa Predicted Gene

Lj1g3v3171150.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3171150.2 tr|B9GUA4|B9GUA4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_552845 PE=4
SV=1,38.06,0.000000000000006,seg,NULL; coiled-coil,NULL,CUFF.30144.2
         (225 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7KUQ4_MEDTR (tr|G7KUQ4) Coiled-coil domain-containing protein M...    89   8e-16
K7MV96_SOYBN (tr|K7MV96) Uncharacterized protein OS=Glycine max ...    86   7e-15
B9GUA4_POPTR (tr|B9GUA4) Predicted protein OS=Populus trichocarp...    65   2e-08
D8TEV7_SELML (tr|D8TEV7) Putative uncharacterized protein OS=Sel...    57   7e-06

>G7KUQ4_MEDTR (tr|G7KUQ4) Coiled-coil domain-containing protein MTMR15
           OS=Medicago truncatula GN=MTR_7g022220 PE=4 SV=1
          Length = 922

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 1   MLSGRESLIRLIGKRRRFLSHRHSILTDPIPTPLHAVXXXXXXXXXXXXAEHTPQNDDVR 60
           +LSGRESLIR IGKRRRFL +RHSIL+DPIP                     + +ND V 
Sbjct: 2   VLSGRESLIRSIGKRRRFLPNRHSILSDPIPL------SHQQPEQPTTAGSDSLENDVVI 55

Query: 61  CPICGRTLPSNNRDINSHLDLCLSLSQSVERSSGKKXXXXXXXXXXXNFTRP 112
           CP+C  +LP +NR INSHLD CL    S  + SG K           NFTRP
Sbjct: 56  CPVCSLSLPDDNRLINSHLDSCL----SEPKRSGTKRKLTQRTLLQLNFTRP 103


>K7MV96_SOYBN (tr|K7MV96) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 916

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 10/99 (10%)

Query: 1  MLSGRESLIRLIGKRRRFLSHRHSILTDPIPTPLHAVXXXXXXXXXXXXAEHTPQ---ND 57
          +L+GRESLIRLIGKRRRFL +RH+IL+D                      E  PQ   ND
Sbjct: 4  VLTGRESLIRLIGKRRRFLPNRHTILSD-------PNPNPNPNPNPIQAVEEPPQSDNND 56

Query: 58 DVRCPICGRTLPSNNRDINSHLDLCLSLSQSVERSSGKK 96
          DV+CP+CGR+LP +N  INSHLD CLS  +    S+ +K
Sbjct: 57 DVQCPVCGRSLPGDNDHINSHLDACLSQPKPTTPSTKRK 95


>B9GUA4_POPTR (tr|B9GUA4) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_552845 PE=4 SV=1
          Length = 1028

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 15/99 (15%)

Query: 1  MLSGRESLIRLIGKRRRFLSHRHSILTD---------PIPTPLHAVXXXXXXXXXXXXAE 51
          ML GRESLIRL+GKRRRFL +R S+L+D         P  TPL+               E
Sbjct: 1  MLRGRESLIRLVGKRRRFLPNRKSLLSDSTSIISNSHPPQTPLNLGKTGENEDGIIMSME 60

Query: 52 -----HTPQNDD-VRCPICGRTLPSNNRDINSHLDLCLS 84
                +PQ+   V CP+C   L + +  INSHLD CL+
Sbjct: 61 SEQKSKSPQSSVLVTCPVCSSKLAAQDHIINSHLDACLT 99


>D8TEV7_SELML (tr|D8TEV7) Putative uncharacterized protein OS=Selaginella
           moellendorffii GN=SELMODRAFT_432065 PE=4 SV=1
          Length = 617

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 69/182 (37%), Gaps = 30/182 (16%)

Query: 1   MLSGRESLIRLIGKRRRFLSHRHSILTDPIPTPLHAVXXXXXXXXXXXXAEHTPQNDDVR 60
           ML GRESLIRL+GKR+R +S            P   V                   D V 
Sbjct: 1   MLRGRESLIRLVGKRQRNVS-----------LPAREVLECGDVSLEIKGGLSLACCDWVE 49

Query: 61  CPICGRTLPSNNRDINSHLDLCLSLSQSVERSSGKKXXXXXXXXXXXNFTRPPKDIVSNG 120
           CP+CG+ +  N   +N HLD CL       +S  KK           NF++  +   S  
Sbjct: 50  CPVCGKQIRGNELLVNCHLDTCL-------QSGKKKKNSVQHTLFHFNFSKKIEYEESGN 102

Query: 121 DAASLVQSPEEEEDDRC----GGDFTEV--------EPDAAISIATTSLNNGVLDQDDNC 168
               + QSP  E    C    G    EV        EPD A S+    LN+   D  + C
Sbjct: 103 CVLEIQQSPPLETGVDCNTAAGSPKPEVSSTLECFEEPDVANSVLLAELNSETRDLYNGC 162

Query: 169 FE 170
            E
Sbjct: 163 LE 164