Miyakogusa Predicted Gene

Lj1g3v3150020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3150020.1 Non Chatacterized Hit- tr|I1KII4|I1KII4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.99,1e-16,no
description,NULL; seg,NULL; RESPONSE_REGULATORY,Signal transduction
response regulator, receiver ,CUFF.30134.1
         (360 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1KII4_SOYBN (tr|I1KII4) Uncharacterized protein OS=Glycine max ...    97   7e-18
B9GPU2_POPTR (tr|B9GPU2) Predicted protein OS=Populus trichocarp...    72   2e-10
B9IC77_POPTR (tr|B9IC77) Pseudo response regulator OS=Populus tr...    69   3e-09
M5XLG3_PRUPE (tr|M5XLG3) Uncharacterized protein OS=Prunus persi...    61   7e-07
B9RDJ9_RICCO (tr|B9RDJ9) Sensor histidine kinase, putative OS=Ri...    59   2e-06
G7LRI8_9ENTR (tr|G7LRI8) Integral membrane sensor hybrid histidi...    59   3e-06
I3AN09_SERPL (tr|I3AN09) Hybrid sensory kinase in two-component ...    58   5e-06

>I1KII4_SOYBN (tr|I1KII4) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 483

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 170/457 (37%), Gaps = 129/457 (28%)

Query: 1   MESNKYQAVESGNY-SPVYGIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPIL 59
           M+S+ +Q+V+   Y  PV GI++LVVD +   L  V  IL +LG+EV+ A+  S+ L I+
Sbjct: 27  MDSDNFQSVDLRKYICPVPGIQVLVVDNNLTCLATVLKILQTLGYEVVTASLASEALAII 86

Query: 60  EGTRNTINLVLVEAHLPSMEIYELSQRIDRSYPICLFL-TANDAQLLASHTRALRKEASV 118
           E  ++ +NL L+E  LP M+I  L+++I     +  FL TAND  L     R  +K  + 
Sbjct: 87  EKKKDELNLALLEVDLPDMKINSLTEKIREISDLQYFLMTANDNPLCNGSKRYFKKPVT- 145

Query: 119 SQLIGDQVSDLRGLW---RFSLCDGPCC-------------------------------- 143
                  + DL  LW   ++ + DG                                   
Sbjct: 146 -------IYDLSSLWMYLKWKIEDGSIVTEDVRSYVNNNQEFQPFLNARGQTLQIGKRKE 198

Query: 144 -----GGDK----VLKLNRYTWTDDIRNIFLEAIESSALS--APP-------NVPQLRED 185
                GG++    +LK  R +WT D    FL  +E S  S  APP       NVP L + 
Sbjct: 199 QRHKIGGNQSESLLLKRKRLSWTGDSHTKFLGGVEFSGTSGEAPPNQRHQLRNVPGLAKQ 258

Query: 186 MASSYYQQAGDETLPNWNGCSCSS----------------NSRSHQLCPLFLNEPGVPNK 229
              ++ QQ+  +  P     +  S                N + HQL          PN 
Sbjct: 259 NVKNHLQQSLQQANPIHQHSNIHSSDLNLGSQYVSQTDNYNGKIHQL----------PNC 308

Query: 230 QKFLCNCM---SQ-----EXXXXXXXXXXXXGV-----------AAHTTSDFGAFMNNGN 270
              +CNCM   SQ     E            G            AAH TS  G FMNNGN
Sbjct: 309 HVKICNCMHLHSQRNPLYELSILSPSDQTSTGQNQLYPPGELFGAAHYTSGSGEFMNNGN 368

Query: 271 GDASQ---------------------DITGVGDNIDGKTXXXXXXXXXXXXXVTPEFPSS 309
           G + +                     D   V   +D  T             +    P S
Sbjct: 369 GKSGETCAENTTDIKVFSEDTHVYCVDDLAVQSEMDFSTLLANDMCQRFHPFLPVPLPPS 428

Query: 310 DENADVIFWPEAEMVSENPPTSEGNVEFNDEDLEKWI 346
           D     I   EA  + E      G  +F+DEDL  W+
Sbjct: 429 DGKEHGISGAEAGQIDEIFYPPNGTQQFSDEDLNIWL 465


>B9GPU2_POPTR (tr|B9GPU2) Predicted protein OS=Populus trichocarpa GN=PtpRR1 PE=4
           SV=1
          Length = 458

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 9/142 (6%)

Query: 1   MESNKYQAVE-SGNYSPVY--GIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLP 57
           M S ++ +VE + N +  +  G++ILVV+  P  L+IVS +L + G+EV  AT  +D L 
Sbjct: 1   MTSEQFLSVEVTKNNASSFAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALH 60

Query: 58  ILEGTRNTINLVLVEAHLPSMEIYELSQRI---DRSYPICLFLTANDAQLLASHTRALRK 114
           IL    + INL+L+E HLP M+ YE+ + +     S PI +F   N+   +      L K
Sbjct: 61  ILREKEDEINLILIETHLPDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLG---WLYK 117

Query: 115 EASVSQLIGDQVSDLRGLWRFS 136
            A++  +     +D++ LW+ +
Sbjct: 118 GAALYLMKPIVKNDVKNLWQLT 139


>B9IC77_POPTR (tr|B9IC77) Pseudo response regulator OS=Populus trichocarpa
           GN=POPTRDRAFT_774312 PE=4 SV=1
          Length = 504

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 5/120 (4%)

Query: 19  GIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPILEGTRNTINLVLVEAHLPSM 78
           G++ILVV+  P  L+IVS +L + G+EV  AT  +D L IL    + INL+L+E  LP M
Sbjct: 22  GVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILIETRLPDM 81

Query: 79  EIYELSQRIDR--SYPICLFLTANDAQLLASHTRALRKEASVSQLIGDQVSDLRGLWRFS 136
             YE+ + +    S PI +F   N+   +      L K A++  +     +D++ LW+ +
Sbjct: 82  NQYEILETLGELSSLPIVVFSADNNESAMLG---CLYKGAALYLMKPIIKNDVKNLWQLT 138


>M5XLG3_PRUPE (tr|M5XLG3) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa020007mg PE=4 SV=1
          Length = 568

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 1   MESNKYQAVESGNYSP--VYGIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPI 58
           M   K  ++ES N S   +  + +LVVD     L I+S +L +LG++V+ A    D L I
Sbjct: 1   MSDEKAISIESVNSSSPRLEAVSVLVVDGDSACLAILSRMLYNLGYKVMTAKRAYDALSI 60

Query: 59  LEGTRNTINLVLVEAHLPSMEIYELSQRID--RSYPICLFLTANDAQLLASHTRALRKEA 116
            +   + ++LVL EAHLP M+ YEL +++      P+ +    +D   +      L K A
Sbjct: 61  AQKKEDELHLVLTEAHLPDMDKYELLEKMKAVSKVPVVIMSDDDDENAMLG---GLFKGA 117

Query: 117 SVSQLIGDQVSDLRGLWRFSLC 138
               +    ++ L+ LW+F++ 
Sbjct: 118 VFYFVKPLTINSLKNLWQFAII 139


>B9RDJ9_RICCO (tr|B9RDJ9) Sensor histidine kinase, putative OS=Ricinus communis
           GN=RCOM_1613700 PE=4 SV=1
          Length = 437

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 19  GIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPILEGTRNTINLVLVEAHLPSM 78
           G+ ILVVD     L IVS +L   G++V+ A   +D L IL   +  ++L+L E HLP M
Sbjct: 18  GVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDM 77

Query: 79  EIYELSQRIDR--SYPICLFLTANDAQLLASHTRALRKEASVSQLIGDQVSDLRGLWRFS 136
           + YEL + +      PI +    +D   +      L K A    L    ++D++ LW+FS
Sbjct: 78  DKYELLETMAEVSCLPIVILSADDDENAMLG---CLFKGAVFYLLKPITMNDVKSLWQFS 134


>G7LRI8_9ENTR (tr|G7LRI8) Integral membrane sensor hybrid histidine kinase
           OS=Brenneria sp. EniD312 GN=BrE312_3230 PE=4 SV=1
          Length = 954

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 12/98 (12%)

Query: 6   YQAVESGNYSPVYGIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPILEGTRNT 65
           Y  +E+G+      I ILVVD HP+  ++++  L SLG+  L A    D L +L  ++NT
Sbjct: 818 YNRIENGD------IMILVVDDHPINRRLLADQLGSLGYMALTANDGVDALSVL--SKNT 869

Query: 66  INLVLVEAHLPSMEIYELSQR---IDRSYPICLFLTAN 100
           +++VL + ++P+M+ Y L+QR   + R++P+ + +TAN
Sbjct: 870 VDIVLTDVNMPNMDGYRLTQRLRELKRTFPV-IGVTAN 906


>I3AN09_SERPL (tr|I3AN09) Hybrid sensory kinase in two-component regulatory
           system with RcsB and YojN OS=Serratia plymuthica PRI-2C
           GN=Q5A_04282 PE=4 SV=1
          Length = 956

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 20  IKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPILEGTRNTINLVLVEAHLPSME 79
           I +LVVD HP+  +++S  L SLG++V+ A    D L +L  +RNT+++VL + ++P+M+
Sbjct: 828 IHLLVVDDHPINRRLLSDQLSSLGYQVVTANDGVDALDVL--SRNTVDIVLTDVNMPNMD 885

Query: 80  IYELSQRIDRSY 91
            Y L+QR+ + +
Sbjct: 886 GYRLTQRLRQQH 897