Miyakogusa Predicted Gene
- Lj1g3v3089430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3089430.1 tr|I1N4T1|I1N4T1_SOYBN DNA-directed RNA
polymerase (Fragment) OS=Glycine max PE=3
SV=1,81.11,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.30026.1
(727 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine ... 1243 0.0
K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine ... 1233 0.0
K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max ... 1185 0.0
M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persi... 1155 0.0
D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vi... 1153 0.0
B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus ... 1137 0.0
B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sa... 1135 0.0
Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sa... 1134 0.0
B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus ... 1134 0.0
J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza br... 1133 0.0
F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vi... 1133 0.0
I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza gl... 1132 0.0
B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus ... 1128 0.0
C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum ... 1126 0.0
M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persi... 1118 0.0
K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria ... 1112 0.0
I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypo... 1110 0.0
M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acu... 1103 0.0
K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum ... 1101 0.0
Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays... 1098 0.0
B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus ... 1093 0.0
K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum ... 1088 0.0
Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia... 1086 0.0
Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum... 1085 0.0
Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) ... 1078 0.0
P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopod... 1073 0.0
G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago... 1069 0.0
M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica... 1069 0.0
R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rub... 1066 0.0
E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar a... 1063 0.0
E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar a... 1060 0.0
F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidop... 1058 0.0
Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sa... 1057 0.0
D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidop... 1056 0.0
F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidop... 1041 0.0
Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cle... 1039 0.0
M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica... 1036 0.0
D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidop... 1028 0.0
R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rub... 1028 0.0
E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar a... 1022 0.0
F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vi... 998 0.0
B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica... 996 0.0
B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus ... 979 0.0
A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sa... 978 0.0
M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persi... 972 0.0
M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica... 967 0.0
B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus ... 967 0.0
R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rub... 962 0.0
Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidop... 960 0.0
D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidop... 960 0.0
Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia... 956 0.0
I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine ... 952 0.0
M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acu... 952 0.0
B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus ... 951 0.0
K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum ... 944 0.0
G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago... 943 0.0
K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine ... 936 0.0
I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypo... 904 0.0
K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria ... 902 0.0
B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sa... 899 0.0
Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sa... 898 0.0
Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum... 898 0.0
A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sa... 898 0.0
Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sa... 898 0.0
I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza gl... 897 0.0
M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica... 895 0.0
I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypo... 895 0.0
Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum ... 894 0.0
Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays... 893 0.0
O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays... 893 0.0
Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum ... 890 0.0
J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) ... 888 0.0
K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine ... 882 0.0
C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum ... 880 0.0
M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rap... 878 0.0
B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chlorop... 863 0.0
B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus ... 861 0.0
K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine ... 858 0.0
Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomi... 831 0.0
Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomi... 831 0.0
A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomi... 828 0.0
M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloropl... 826 0.0
F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidop... 816 0.0
B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor)... 815 0.0
D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) ... 815 0.0
Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomi... 814 0.0
A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomi... 813 0.0
Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomi... 812 0.0
M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2, chloropl... 807 0.0
M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2, chloropl... 798 0.0
N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloropl... 795 0.0
B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus... 793 0.0
N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcom... 780 0.0
A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomi... 778 0.0
I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine ... 775 0.0
M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tube... 744 0.0
M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulg... 711 0.0
M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum ... 699 0.0
K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max ... 692 0.0
Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) ... 677 0.0
K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max ... 652 0.0
K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max ... 651 0.0
D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleri... 581 e-163
C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromon... 578 e-162
Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleri... 576 e-161
K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoc... 573 e-161
Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreoco... 572 e-160
Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment) ... 570 e-160
A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreoco... 567 e-159
D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polyspho... 563 e-158
Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum... 561 e-157
L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acantham... 560 e-156
A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) ... 553 e-155
C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromon... 552 e-154
E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorell... 551 e-154
F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyost... 546 e-153
F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyost... 546 e-152
I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus... 544 e-152
F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococ... 542 e-151
M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis... 540 e-151
J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosp... 540 e-150
K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosp... 538 e-150
R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squale... 538 e-150
Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) ... 531 e-148
I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyx... 531 e-148
F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo l... 530 e-148
K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phaneroc... 530 e-148
B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays... 530 e-148
J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibropor... 529 e-147
K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ... 528 e-147
Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyost... 526 e-147
G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobo... 526 e-146
R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ich... 526 e-146
Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptoco... 525 e-146
Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptoco... 525 e-146
F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptoco... 524 e-146
Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptoco... 523 e-146
Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptoco... 523 e-146
F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptoco... 523 e-146
F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptoco... 523 e-146
F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula ... 523 e-146
Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptoco... 523 e-145
F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptoco... 523 e-145
F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula ... 523 e-145
Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptoco... 523 e-145
Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptoco... 523 e-145
Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptoco... 522 e-145
M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidio... 521 e-145
H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachst... 521 e-145
D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizoph... 521 e-145
J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptoco... 521 e-145
B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) ... 521 e-145
D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniell... 519 e-144
M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna... 518 e-144
G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryoti... 518 e-144
Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptoco... 518 e-144
E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptoco... 518 e-144
E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisor... 518 e-144
H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytopht... 517 e-144
G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotor... 517 e-144
L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillard... 516 e-143
Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago... 516 e-143
M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosp... 515 e-143
G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia os... 514 e-143
R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma h... 514 e-143
L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizocto... 514 e-143
M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassez... 513 e-143
A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Scleroti... 513 e-142
M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed ... 513 e-142
I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia... 512 e-142
G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida ... 510 e-142
G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomi... 510 e-141
I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapis... 510 e-141
J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachst... 509 e-141
M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceripori... 509 e-141
G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavi... 509 e-141
Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida ... 507 e-141
N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeri... 506 e-140
Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoe... 506 e-140
N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletot... 506 e-140
Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) ... 505 e-140
F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelp... 504 e-140
C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachance... 502 e-139
A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, w... 502 e-139
C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthrode... 501 e-139
D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber me... 501 e-139
F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis fa... 501 e-139
A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassez... 501 e-139
I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago... 501 e-139
J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis fa... 500 e-139
M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna... 500 e-139
Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family pro... 499 e-138
H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) ... 499 e-138
B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodac... 498 e-138
Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomi... 498 e-138
M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphopho... 497 e-138
G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavi... 497 e-138
G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovoz... 497 e-138
L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletot... 496 e-137
K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus... 496 e-137
K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus... 496 e-137
Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyvero... 496 e-137
H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharo... 496 e-137
A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.... 495 e-137
G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytopht... 495 e-137
B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidio... 494 e-137
C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidio... 494 e-137
J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidio... 494 e-137
Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya g... 494 e-137
M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=F... 494 e-137
E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletot... 494 e-137
D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarp... 493 e-136
B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodac... 493 e-136
H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharo... 493 e-136
L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces... 493 e-136
G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia s... 493 e-136
C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinoca... 493 e-136
A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffer... 492 e-136
F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagata... 492 e-136
R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna... 492 e-136
C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagata... 492 e-136
H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletot... 491 e-136
L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) ... 491 e-136
G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticil... 491 e-136
A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomy... 491 e-136
G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulasp... 491 e-136
G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ich... 490 e-136
D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocy... 490 e-136
F1Q5F7_DANRE (tr|F1Q5F7) DNA-directed RNA polymerase OS=Danio re... 490 e-136
H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur... 490 e-136
H3CZ72_TETNG (tr|H3CZ72) DNA-directed RNA polymerase (Fragment) ... 490 e-135
Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor)... 490 e-135
M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (... 489 e-135
D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichoph... 489 e-135
G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospo... 489 e-135
F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospo... 489 e-135
C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosacc... 489 e-135
F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus ... 489 e-135
Q59E91_HUMAN (tr|Q59E91) DNA-directed RNA polymerase (Fragment) ... 489 e-135
Q4G0F4_HUMAN (tr|Q4G0F4) DNA-directed RNA polymerase OS=Homo sap... 489 e-135
B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassi... 489 e-135
I2CX83_MACMU (tr|I2CX83) DNA-directed RNA polymerase OS=Macaca m... 489 e-135
K6ZBI1_PANTR (tr|K6ZBI1) DNA-directed RNA polymerase OS=Pan trog... 489 e-135
K7EKS3_HUMAN (tr|K7EKS3) DNA-directed RNA polymerase OS=Homo sap... 489 e-135
C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomy... 488 e-135
R7YGD8_9EURO (tr|R7YGD8) Uncharacterized protein OS=Coniosporium... 488 e-135
J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharo... 488 e-135
F4S3X3_MELLP (tr|F4S3X3) DNA-directed RNA polymerase OS=Melampso... 488 e-135
G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapis... 488 e-135
C0RZR9_PARBP (tr|C0RZR9) DNA-directed RNA polymerase OS=Paracocc... 487 e-135
F2RVR6_TRIT1 (tr|F2RVR6) DNA-directed RNA polymerase OS=Trichoph... 486 e-134
F2Q2T9_TRIEC (tr|F2Q2T9) DNA-directed RNA polymerase OS=Trichoph... 486 e-134
D4B1W3_ARTBC (tr|D4B1W3) DNA-directed RNA polymerase OS=Arthrode... 486 e-134
C1G892_PARBD (tr|C1G892) DNA-directed RNA polymerase OS=Paracocc... 486 e-134
G1QJ40_NOMLE (tr|G1QJ40) DNA-directed RNA polymerase OS=Nomascus... 486 e-134
F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomy... 486 e-134
I3J2B8_ORENI (tr|I3J2B8) DNA-directed RNA polymerase (Fragment) ... 486 e-134
E4UVQ3_ARTGP (tr|E4UVQ3) DNA-directed RNA polymerase OS=Arthrode... 485 e-134
F7VNT9_SORMK (tr|F7VNT9) DNA-directed RNA polymerase OS=Sordaria... 485 e-134
F2TG61_AJEDA (tr|F2TG61) DNA-directed RNA polymerase OS=Ajellomy... 485 e-134
F2SGD5_TRIRC (tr|F2SGD5) DNA-directed RNA polymerase OS=Trichoph... 485 e-134
M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela ... 485 e-134
B8MRF0_TALSN (tr|B8MRF0) DNA-directed RNA polymerase OS=Talaromy... 484 e-134
C5JUP7_AJEDS (tr|C5JUP7) DNA-directed RNA polymerase OS=Ajellomy... 484 e-134
C5GMV9_AJEDR (tr|C5GMV9) DNA-directed RNA polymerase OS=Ajellomy... 484 e-134
D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus nor... 484 e-134
C1GZG1_PARBA (tr|C1GZG1) DNA-directed RNA polymerase OS=Paracocc... 484 e-134
H2VAF6_TAKRU (tr|H2VAF6) DNA-directed RNA polymerase (Fragment) ... 484 e-134
D2HMC2_AILME (tr|D2HMC2) DNA-directed RNA polymerase (Fragment) ... 483 e-133
G1L7Q8_AILME (tr|G1L7Q8) DNA-directed RNA polymerase OS=Ailuropo... 483 e-133
B6Q8C3_PENMQ (tr|B6Q8C3) DNA-directed RNA polymerase OS=Penicill... 483 e-133
K2RJP7_MACPH (tr|K2RJP7) DNA-directed RNA polymerase OS=Macropho... 483 e-133
H3CZ71_TETNG (tr|H3CZ71) DNA-directed RNA polymerase (Fragment) ... 482 e-133
H2VAF8_TAKRU (tr|H2VAF8) DNA-directed RNA polymerase (Fragment) ... 481 e-133
H2VAF7_TAKRU (tr|H2VAF7) DNA-directed RNA polymerase (Fragment) ... 481 e-133
B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosa... 480 e-133
H2VAF5_TAKRU (tr|H2VAF5) DNA-directed RNA polymerase (Fragment) ... 479 e-132
G7XU63_ASPKW (tr|G7XU63) DNA-directed RNA polymerase OS=Aspergil... 479 e-132
G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis l... 479 e-132
Q4SDA8_TETNG (tr|Q4SDA8) DNA-directed RNA polymerase (Fragment) ... 479 e-132
K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssoni... 479 e-132
G0VD01_NAUCC (tr|G0VD01) DNA-directed RNA polymerase OS=Naumovoz... 479 e-132
K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus... 479 e-132
G3XYH4_ASPNA (tr|G3XYH4) DNA-directed RNA polymerase OS=Aspergil... 479 e-132
A2R5W5_ASPNC (tr|A2R5W5) DNA-directed RNA polymerase OS=Aspergil... 479 e-132
G5C5W3_HETGA (tr|G5C5W3) DNA-directed RNA polymerase OS=Heteroce... 479 e-132
G9HRK4_9SPIT (tr|G9HRK4) DNA-dependent RNA polymerase family pro... 479 e-132
G8JMS2_ERECY (tr|G8JMS2) DNA-directed RNA polymerase OS=Eremothe... 479 e-132
L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis d... 478 e-132
F9XJE6_MYCGM (tr|F9XJE6) DNA-directed RNA polymerase OS=Mycospha... 478 e-132
C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomy... 478 e-132
Q2UD92_ASPOR (tr|Q2UD92) DNA-directed RNA polymerase OS=Aspergil... 478 e-132
I8TNX0_ASPO3 (tr|I8TNX0) DNA-directed RNA polymerase OS=Aspergil... 478 e-132
B8N6M7_ASPFN (tr|B8N6M7) DNA-directed RNA polymerase OS=Aspergil... 478 e-132
I3M2A6_SPETR (tr|I3M2A6) DNA-directed RNA polymerase OS=Spermoph... 478 e-132
H2RFP7_PANTR (tr|H2RFP7) DNA-directed RNA polymerase (Fragment) ... 478 e-132
R4XD37_9ASCO (tr|R4XD37) DNA-directed RNA polymerase OS=Taphrina... 477 e-132
E7R4S0_PICAD (tr|E7R4S0) DNA-directed RNA polymerase OS=Pichia a... 476 e-131
R8BT27_9PEZI (tr|R8BT27) Putative dna-directed rna polymerase pr... 476 e-131
H3ATV4_LATCH (tr|H3ATV4) DNA-directed RNA polymerase (Fragment) ... 475 e-131
H2VAF9_TAKRU (tr|H2VAF9) DNA-directed RNA polymerase (Fragment) ... 475 e-131
D6WV41_TRICA (tr|D6WV41) DNA-directed RNA polymerase OS=Triboliu... 475 e-131
A1DIB9_NEOFI (tr|A1DIB9) DNA-directed RNA polymerase OS=Neosarto... 474 e-131
G3SPD8_LOXAF (tr|G3SPD8) DNA-directed RNA polymerase (Fragment) ... 474 e-131
Q0CV53_ASPTN (tr|Q0CV53) DNA-directed RNA polymerase OS=Aspergil... 474 e-131
Q3V3C0_MOUSE (tr|Q3V3C0) DNA-directed RNA polymerase (Fragment) ... 474 e-131
E1BCZ0_BOVIN (tr|E1BCZ0) DNA-directed RNA polymerase OS=Bos taur... 474 e-131
B9W6L5_CANDC (tr|B9W6L5) DNA-directed RNA polymerase OS=Candida ... 473 e-131
Q4WZV7_ASPFU (tr|Q4WZV7) DNA-directed RNA polymerase OS=Neosarto... 473 e-130
Q3U3J3_MOUSE (tr|Q3U3J3) DNA-directed RNA polymerase OS=Mus musc... 473 e-130
E9EXQ5_METAR (tr|E9EXQ5) DNA-directed RNA polymerase OS=Metarhiz... 473 e-130
B0XUL0_ASPFC (tr|B0XUL0) DNA-directed RNA polymerase OS=Neosarto... 473 e-130
M3V845_PIG (tr|M3V845) DNA-directed RNA polymerase OS=Sus scrofa... 473 e-130
B5RTF6_DEBHA (tr|B5RTF6) DNA-directed RNA polymerase OS=Debaryom... 472 e-130
K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerha... 472 e-130
Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericel... 472 e-130
E9EDA9_METAQ (tr|E9EDA9) DNA-directed RNA polymerase OS=Metarhiz... 470 e-130
C3Y2C4_BRAFL (tr|C3Y2C4) DNA-directed RNA polymerase OS=Branchio... 470 e-130
M3IK19_CANMA (tr|M3IK19) DNA-directed RNA polymerase OS=Candida ... 470 e-129
A5DN82_PICGU (tr|A5DN82) DNA-directed RNA polymerase OS=Meyerozy... 469 e-129
M1W4C2_CLAPU (tr|M1W4C2) DNA-directed RNA polymerase OS=Clavicep... 469 e-129
C5ME71_CANTT (tr|C5ME71) DNA-directed RNA polymerase OS=Candida ... 469 e-129
Q5ABC9_CANAL (tr|Q5ABC9) DNA-directed RNA polymerase OS=Candida ... 469 e-129
E3KKR4_PUCGT (tr|E3KKR4) DNA-directed RNA polymerase OS=Puccinia... 469 e-129
C4YFJ1_CANAW (tr|C4YFJ1) DNA-directed RNA polymerase OS=Candida ... 469 e-129
H8X1L6_CANO9 (tr|H8X1L6) DNA-directed RNA polymerase OS=Candida ... 467 e-129
E1BZ13_CHICK (tr|E1BZ13) DNA-directed RNA polymerase OS=Gallus g... 467 e-129
A5DVV6_LODEL (tr|A5DVV6) DNA-directed RNA polymerase OS=Lodderom... 466 e-128
G4TLX8_PIRID (tr|G4TLX8) Related to RPO41-DNA-directed RNA polym... 466 e-128
G4NFN6_MAGO7 (tr|G4NFN6) DNA-directed RNA polymerase OS=Magnapor... 466 e-128
G9MXM1_HYPVG (tr|G9MXM1) DNA-directed RNA polymerase OS=Hypocrea... 465 e-128
H0VY05_CAVPO (tr|H0VY05) DNA-directed RNA polymerase OS=Cavia po... 465 e-128
G1MW79_MELGA (tr|G1MW79) DNA-directed RNA polymerase (Fragment) ... 465 e-128
C4Y8E3_CLAL4 (tr|C4Y8E3) DNA-directed RNA polymerase OS=Clavispo... 464 e-128
G4Z814_PHYSP (tr|G4Z814) DNA-directed RNA polymerase OS=Phytopht... 464 e-128
L7JAR4_MAGOR (tr|L7JAR4) DNA-directed RNA polymerase OS=Magnapor... 464 e-128
L7IDF0_MAGOR (tr|L7IDF0) DNA-directed RNA polymerase OS=Magnapor... 464 e-128
G0RQ42_HYPJQ (tr|G0RQ42) DNA-directed RNA polymerase OS=Hypocrea... 463 e-127
A1C7P8_ASPCL (tr|A1C7P8) DNA-directed RNA polymerase OS=Aspergil... 462 e-127
G3AEY0_SPAPN (tr|G3AEY0) Putative uncharacterized protein OS=Spa... 462 e-127
E9PWD9_MOUSE (tr|E9PWD9) DNA-directed RNA polymerase OS=Mus musc... 462 e-127
H6BKV4_EXODN (tr|H6BKV4) DNA-directed RNA polymerase OS=Exophial... 461 e-127
M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieri... 460 e-127
K9G2U3_PEND2 (tr|K9G2U3) DNA-directed RNA polymerase OS=Penicill... 460 e-127
K9F8K1_PEND1 (tr|K9F8K1) DNA-directed RNA polymerase OS=Penicill... 460 e-127
B6HKC8_PENCW (tr|B6HKC8) DNA-directed RNA polymerase OS=Penicill... 460 e-127
G8B7X1_CANPC (tr|G8B7X1) DNA-directed RNA polymerase OS=Candida ... 460 e-126
C7YY77_NECH7 (tr|C7YY77) DNA-directed RNA polymerase OS=Nectria ... 459 e-126
R7VVF1_COLLI (tr|R7VVF1) DNA-directed RNA polymerase, mitochondr... 457 e-126
N4UNZ4_FUSOX (tr|N4UNZ4) DNA-directed RNA polymerase, mitochondr... 457 e-126
J9N1Y6_FUSO4 (tr|J9N1Y6) DNA-directed RNA polymerase OS=Fusarium... 457 e-126
N1RVU8_FUSOX (tr|N1RVU8) DNA-directed RNA polymerase, mitochondr... 457 e-126
G3HF40_CRIGR (tr|G3HF40) DNA-directed RNA polymerase OS=Cricetul... 457 e-125
F9F6M8_FUSOF (tr|F9F6M8) DNA-directed RNA polymerase OS=Fusarium... 456 e-125
A5JEF2_PARLI (tr|A5JEF2) DNA-directed RNA polymerase OS=Paracent... 456 e-125
E4ZQ41_LEPMJ (tr|E4ZQ41) DNA-directed RNA polymerase OS=Leptosph... 456 e-125
G9NT70_HYPAI (tr|G9NT70) DNA-directed RNA polymerase OS=Hypocrea... 455 e-125
B3RXA6_TRIAD (tr|B3RXA6) DNA-directed RNA polymerase (Fragment) ... 455 e-125
Q17K00_AEDAE (tr|Q17K00) DNA-directed RNA polymerase OS=Aedes ae... 455 e-125
F7GCL4_CALJA (tr|F7GCL4) DNA-directed RNA polymerase (Fragment) ... 454 e-125
J4UIN0_BEAB2 (tr|J4UIN0) DNA-directed RNA polymerase OS=Beauveri... 454 e-125
G3W635_SARHA (tr|G3W635) DNA-directed RNA polymerase (Fragment) ... 454 e-125
G3JSG1_CORMM (tr|G3JSG1) DNA-directed RNA polymerase OS=Cordycep... 453 e-124
B2WGL2_PYRTR (tr|B2WGL2) DNA-directed RNA polymerase OS=Pyrenoph... 452 e-124
J9K183_ACYPI (tr|J9K183) DNA-directed RNA polymerase OS=Acyrthos... 449 e-123
H0YQS8_TAEGU (tr|H0YQS8) DNA-directed RNA polymerase (Fragment) ... 449 e-123
Q6CH64_YARLI (tr|Q6CH64) DNA-directed RNA polymerase OS=Yarrowia... 449 e-123
E3RGN3_PYRTT (tr|E3RGN3) DNA-directed RNA polymerase OS=Pyrenoph... 447 e-123
F4WHT1_ACREC (tr|F4WHT1) DNA-directed RNA polymerase OS=Acromyrm... 446 e-122
R0IQ82_SETTU (tr|R0IQ82) Uncharacterized protein OS=Setosphaeria... 446 e-122
Q0U2N8_PHANO (tr|Q0U2N8) DNA-directed RNA polymerase OS=Phaeosph... 442 e-121
A9V1Q0_MONBE (tr|A9V1Q0) DNA-directed RNA polymerase OS=Monosiga... 441 e-121
B3MN87_DROAN (tr|B3MN87) DNA-directed RNA polymerase OS=Drosophi... 441 e-121
G3PHQ7_GASAC (tr|G3PHQ7) DNA-directed RNA polymerase (Fragment) ... 440 e-120
N4XC35_COCHE (tr|N4XC35) Uncharacterized protein OS=Bipolaris ma... 440 e-120
M2TI11_COCHE (tr|M2TI11) DNA-directed RNA polymerase OS=Bipolari... 440 e-120
K3W0W7_FUSPC (tr|K3W0W7) DNA-directed RNA polymerase OS=Fusarium... 439 e-120
Q0QFS3_9MYCE (tr|Q0QFS3) DNA-directed RNA polymerase (Fragment) ... 438 e-120
E1ZV06_CAMFO (tr|E1ZV06) DNA-directed RNA polymerase OS=Camponot... 438 e-120
F2U5G9_SALS5 (tr|F2U5G9) DNA-directed RNA polymerase OS=Salpingo... 437 e-120
M2TMC0_COCSA (tr|M2TMC0) DNA-directed RNA polymerase OS=Bipolari... 437 e-120
E9J4Y7_SOLIN (tr|E9J4Y7) DNA-directed RNA polymerase (Fragment) ... 436 e-119
B4LUB0_DROVI (tr|B4LUB0) DNA-directed RNA polymerase OS=Drosophi... 436 e-119
B4JQF3_DROGR (tr|B4JQF3) DNA-directed RNA polymerase OS=Drosophi... 436 e-119
B4KET7_DROMO (tr|B4KET7) DNA-directed RNA polymerase OS=Drosophi... 434 e-119
Q16EA9_AEDAE (tr|Q16EA9) DNA-directed RNA polymerase OS=Aedes ae... 434 e-119
F7GNJ0_MACMU (tr|F7GNJ0) DNA-directed RNA polymerase OS=Macaca m... 434 e-119
B0W1Q8_CULQU (tr|B0W1Q8) DNA-directed RNA polymerase OS=Culex qu... 433 e-118
B4MZP1_DROWI (tr|B4MZP1) DNA-directed RNA polymerase OS=Drosophi... 432 e-118
Q29LI1_DROPS (tr|Q29LI1) DNA-directed RNA polymerase OS=Drosophi... 432 e-118
B4Q6M5_DROSI (tr|B4Q6M5) DNA-directed RNA polymerase OS=Drosophi... 431 e-118
E0VGQ8_PEDHC (tr|E0VGQ8) DNA-directed RNA polymerase OS=Pediculu... 430 e-118
Q9VPW4_DROME (tr|Q9VPW4) DNA-directed RNA polymerase OS=Drosophi... 428 e-117
B4ID50_DROSE (tr|B4ID50) DNA-directed RNA polymerase OS=Drosophi... 428 e-117
B4P304_DROYA (tr|B4P304) DNA-directed RNA polymerase OS=Drosophi... 428 e-117
B3N8B5_DROER (tr|B3N8B5) DNA-directed RNA polymerase OS=Drosophi... 426 e-116
M3WNJ2_FELCA (tr|M3WNJ2) DNA-directed RNA polymerase (Fragment) ... 425 e-116
L5L765_PTEAL (tr|L5L765) DNA-directed RNA polymerase OS=Pteropus... 425 e-116
R7QN31_CHOCR (tr|R7QN31) Stackhouse genomic scaffold, scaffold_4... 424 e-116
N6T6B1_9CUCU (tr|N6T6B1) Uncharacterized protein (Fragment) OS=D... 421 e-115
E9GF52_DAPPU (tr|E9GF52) DNA-directed RNA polymerase OS=Daphnia ... 420 e-114
C9S6U0_VERA1 (tr|C9S6U0) DNA-directed RNA polymerase OS=Verticil... 417 e-114
A8PG00_BRUMA (tr|A8PG00) DNA-directed RNA polymerase OS=Brugia m... 417 e-114
Q0QFS0_9EUKA (tr|Q0QFS0) DNA-directed RNA polymerase (Fragment) ... 414 e-113
E1GB82_LOALO (tr|E1GB82) DNA-directed RNA polymerase OS=Loa loa ... 414 e-112
F1KUB3_ASCSU (tr|F1KUB3) DNA-directed RNA polymerase OS=Ascaris ... 412 e-112
Q2PZ44_TIGCA (tr|Q2PZ44) DNA-directed RNA polymerase OS=Tigriopu... 411 e-112
Q2PZ39_TIGCA (tr|Q2PZ39) DNA-directed RNA polymerase OS=Tigriopu... 411 e-112
M4QNP6_TIGCA (tr|M4QNP6) Mitochondrial RNA polymerase (Fragment)... 411 e-112
Q2PZ43_TIGCA (tr|Q2PZ43) DNA-directed RNA polymerase OS=Tigriopu... 410 e-112
Q2PZ40_TIGCA (tr|Q2PZ40) DNA-directed RNA polymerase (Fragment) ... 410 e-112
Q9D196_MOUSE (tr|Q9D196) DNA-directed RNA polymerase (Fragment) ... 410 e-111
Q2PZ36_TIGCA (tr|Q2PZ36) DNA-directed RNA polymerase (Fragment) ... 410 e-111
Q2PZ37_TIGCA (tr|Q2PZ37) DNA-directed RNA polymerase OS=Tigriopu... 410 e-111
Q2PZ34_TIGCA (tr|Q2PZ34) DNA-directed RNA polymerase (Fragment) ... 409 e-111
Q2PZ45_TIGCA (tr|Q2PZ45) DNA-directed RNA polymerase OS=Tigriopu... 409 e-111
D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasi... 409 e-111
H2Y632_CIOSA (tr|H2Y632) DNA-directed RNA polymerase (Fragment) ... 409 e-111
Q2PZ41_TIGCA (tr|Q2PZ41) DNA-directed RNA polymerase OS=Tigriopu... 407 e-111
Q2PZ35_TIGCA (tr|Q2PZ35) DNA-directed RNA polymerase (Fragment) ... 407 e-111
I1FB80_AMPQE (tr|I1FB80) Uncharacterized protein OS=Amphimedon q... 407 e-111
Q2PZ38_TIGCA (tr|Q2PZ38) DNA-directed RNA polymerase OS=Tigriopu... 407 e-110
E9CAC7_CAPO3 (tr|E9CAC7) DNA-directed RNA polymerase OS=Capsaspo... 405 e-110
Q2PZ42_TIGCA (tr|Q2PZ42) DNA-directed RNA polymerase OS=Tigriopu... 404 e-110
M0ZLT2_SOLTU (tr|M0ZLT2) Uncharacterized protein OS=Solanum tube... 404 e-110
Q4Z4B5_PLABA (tr|Q4Z4B5) DNA-directed RNA polymerase (Fragment) ... 402 e-109
L7LYM7_9ACAR (tr|L7LYM7) DNA-directed RNA polymerase OS=Rhipicep... 401 e-109
Q7RAE1_PLAYO (tr|Q7RAE1) DNA-directed RNA polymerase OS=Plasmodi... 400 e-109
A7T5U5_NEMVE (tr|A7T5U5) DNA-directed RNA polymerase OS=Nematost... 399 e-108
I3J2B7_ORENI (tr|I3J2B7) DNA-directed RNA polymerase OS=Oreochro... 399 e-108
K7L904_SOYBN (tr|K7L904) Uncharacterized protein OS=Glycine max ... 399 e-108
L8XZH8_TUPCH (tr|L8XZH8) DNA-directed RNA polymerase OS=Tupaia c... 398 e-108
A7AMS9_BABBO (tr|A7AMS9) DNA-directed RNA polymerase OS=Babesia ... 397 e-108
C5KD29_PERM5 (tr|C5KD29) Putative uncharacterized protein OS=Per... 397 e-108
E2B480_HARSA (tr|E2B480) DNA-directed RNA polymerase OS=Harpegna... 394 e-107
A5K4R4_PLAVS (tr|A5K4R4) DNA-directed RNA polymerase OS=Plasmodi... 391 e-106
M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondr... 390 e-106
G7YI53_CLOSI (tr|G7YI53) DNA-directed RNA polymerase OS=Clonorch... 384 e-104
H2WBN7_CAEJA (tr|H2WBN7) DNA-directed RNA polymerase OS=Caenorha... 384 e-104
J3QFB0_PUCT1 (tr|J3QFB0) DNA-directed RNA polymerase OS=Puccinia... 384 e-104
B3L558_PLAKH (tr|B3L558) DNA-directed RNA polymerase OS=Plasmodi... 383 e-103
Q8IIB0_PLAF7 (tr|Q8IIB0) DNA-directed RNA polymerase OS=Plasmodi... 383 e-103
Q9GZ07_PLAFA (tr|Q9GZ07) DNA-directed RNA polymerase OS=Plasmodi... 383 e-103
A8XWB1_CAEBR (tr|A8XWB1) DNA-directed RNA polymerase OS=Caenorha... 383 e-103
A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinop... 382 e-103
Q8WQA3_CAEEL (tr|Q8WQA3) DNA-directed RNA polymerase OS=Caenorha... 382 e-103
G3SEZ7_GORGO (tr|G3SEZ7) DNA-directed RNA polymerase (Fragment) ... 382 e-103
A7S3D0_NEMVE (tr|A7S3D0) DNA-directed RNA polymerase (Fragment) ... 379 e-102
E5SG31_TRISP (tr|E5SG31) DNA-directed RNA polymerase OS=Trichine... 378 e-102
E3N1N7_CAERE (tr|E3N1N7) DNA-directed RNA polymerase OS=Caenorha... 376 e-101
A5PEY3_CAEEL (tr|A5PEY3) DNA-directed RNA polymerase OS=Caenorha... 376 e-101
K6UTD6_9APIC (tr|K6UTD6) DNA-directed RNA polymerase OS=Plasmodi... 375 e-101
G4V993_SCHMA (tr|G4V993) DNA-directed RNA polymerase OS=Schistos... 373 e-100
K7N813_HETTR (tr|K7N813) DNA-directed RNA polymerase OS=Heteroca... 373 e-100
R7VAU6_9ANNE (tr|R7VAU6) Uncharacterized protein OS=Capitella te... 372 e-100
N1QDP6_9PEZI (tr|N1QDP6) DNA/RNA polymerase OS=Mycosphaerella po... 370 e-100
A5CAT5_VITVI (tr|A5CAT5) Putative uncharacterized protein OS=Vit... 370 1e-99
G0MJN3_CAEBE (tr|G0MJN3) DNA-directed RNA polymerase OS=Caenorha... 370 1e-99
M3AMX9_9PEZI (tr|M3AMX9) DNA-directed RNA polymerase OS=Pseudoce... 370 2e-99
N1PGJ0_MYCPJ (tr|N1PGJ0) Uncharacterized protein OS=Dothistroma ... 369 2e-99
J3P6J0_GAGT3 (tr|J3P6J0) DNA-directed RNA polymerase OS=Gaeumann... 367 1e-98
F0VQ85_NEOCL (tr|F0VQ85) DNA-directed RNA polymerase OS=Neospora... 364 8e-98
F4P6A9_BATDJ (tr|F4P6A9) Putative uncharacterized protein OS=Bat... 363 2e-97
M2MY29_9PEZI (tr|M2MY29) DNA-directed RNA polymerase OS=Baudoini... 363 2e-97
D5AB05_PICSI (tr|D5AB05) Putative uncharacterized protein OS=Pic... 362 3e-97
B2ANR4_PODAN (tr|B2ANR4) DNA-directed RNA polymerase OS=Podospor... 362 3e-97
Q4N745_THEPA (tr|Q4N745) DNA-directed RNA polymerase OS=Theileri... 362 3e-97
Q4UIH0_THEAN (tr|Q4UIH0) DNA-directed RNA polymerase OS=Theileri... 361 5e-97
G3SF84_GORGO (tr|G3SF84) Uncharacterized protein (Fragment) OS=G... 360 2e-96
I7ISY9_BABMI (tr|I7ISY9) DNA-directed RNA polymerase OS=Babesia ... 360 2e-96
G8YHR0_PICSO (tr|G8YHR0) DNA-directed RNA polymerase OS=Pichia s... 359 3e-96
H2QES6_PANTR (tr|H2QES6) Uncharacterized protein OS=Pan troglody... 358 5e-96
F0X893_GROCL (tr|F0X893) DNA-directed RNA polymerase OS=Grosmann... 357 8e-96
B9PQ14_TOXGO (tr|B9PQ14) DNA-directed RNA polymerase OS=Toxoplas... 357 1e-95
B6KGP1_TOXGO (tr|B6KGP1) DNA-directed RNA polymerase OS=Toxoplas... 357 1e-95
Q6BKS8_DEBHA (tr|Q6BKS8) DNA-directed RNA polymerase OS=Debaryom... 352 3e-94
A5DAF4_PICGU (tr|A5DAF4) DNA-directed RNA polymerase OS=Meyerozy... 348 5e-93
L1LFT7_BABEQ (tr|L1LFT7) DNA-directed RNA polymerase OS=Babesia ... 345 6e-92
H3IXW4_STRPU (tr|H3IXW4) DNA-directed RNA polymerase OS=Strongyl... 344 7e-92
H9I8M0_ATTCE (tr|H9I8M0) DNA-directed RNA polymerase OS=Atta cep... 342 3e-91
A3LWB9_PICST (tr|A3LWB9) DNA-directed RNA polymerase (Fragment) ... 336 2e-89
J4C7R0_THEOR (tr|J4C7R0) DNA-directed RNA polymerase OS=Theileri... 336 3e-89
H9JHD2_BOMMO (tr|H9JHD2) Uncharacterized protein OS=Bombyx mori ... 334 9e-89
M3GE26_STEMA (tr|M3GE26) DNA-directed RNA polymerase OS=Stenotro... 326 2e-86
M5CVP8_STEMA (tr|M5CVP8) DNA-directed RNA polymerase OS=Stenotro... 324 6e-86
Q385J0_TRYB2 (tr|Q385J0) Mitochondrial DNA-directed RNA polymera... 323 2e-85
D0A783_TRYB9 (tr|D0A783) Mitochondrial DNA-directed RNA polymera... 323 2e-85
Q95WT2_9TRYP (tr|Q95WT2) RNA polymerase OS=Trypanosoma brucei GN... 322 3e-85
C5MG54_CANTT (tr|C5MG54) DNA-directed RNA polymerase OS=Candida ... 320 9e-85
F9WCU6_TRYCI (tr|F9WCU6) Putative uncharacterized protein TCIL30... 320 1e-84
E9HSK9_DAPPU (tr|E9HSK9) Putative uncharacterized protein OS=Dap... 316 2e-83
G9KHU0_MUSPF (tr|G9KHU0) DNA-directed RNA polymerase (Fragment) ... 316 3e-83
K1R5B9_CRAGI (tr|K1R5B9) DNA-directed RNA polymerase, mitochondr... 314 7e-83
B9WK99_CANDC (tr|B9WK99) DNA-directed RNA polymerase OS=Candida ... 313 2e-82
F6TLB0_MOUSE (tr|F6TLB0) DNA-directed RNA polymerase, mitochondr... 313 2e-82
>K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1046
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/690 (85%), Positives = 635/690 (92%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE +AGES +IKE++KLRKKVIDLMKKQK+ AVRG++K +
Sbjct: 327 EVRIHKFLEKTKKKKGDRSNKNKAGESVADIKEEQKLRKKVIDLMKKQKLVAVRGLVKGK 386
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+DTKPWG V++TKVGSRL+ELL+QTAYIQPPSDQ+ D +PDIRPAFVHSF+TVTKE+ K
Sbjct: 387 DDTKPWGAVIKTKVGSRLIELLLQTAYIQPPSDQLPDAAPDIRPAFVHSFKTVTKESIKA 446
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++GII+CDPLILKGL+R+AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV+
Sbjct: 447 SRRYGIIQCDPLILKGLERTAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVR 506
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKRAP+KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR+ADLVDRDDVPL
Sbjct: 507 QQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPL 566
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
P+EPDTDDEA+I ENRERYSQRCDIELKLAVARKMKDEE FYYPHN+DF
Sbjct: 567 PDEPDTDDEAKIKKWKWKYKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDF 626
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHPHLNHLGSD+CRGILEFA+GR LGKSG +WLKIHLANLYAGGVDKLS EGR+
Sbjct: 627 RGRAYPMHPHLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYEGRL 686
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H +DIFDSADKPLEGRRWWL AEDP QCLAVCITLTEALRSSSPETFISHIPVHQ
Sbjct: 687 AFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFISHIPVHQ 746
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAAAVNLV GEKPADVYSGIAARV +IM+ DAQKDPA+F DA
Sbjct: 747 DGSCNGLQHYAALGRDKLGAAAVNLVTGEKPADVYSGIAARVSNIMQRDAQKDPAVFRDA 806
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER+ SDD +LFGASCYAAK
Sbjct: 807 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDKELFGASCYAAK 866
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTALEEMFQGAR IM+WLG+CAKVIASENQPVRWTTPLGLPVVQPYRKLG+HIIKTSL
Sbjct: 867 VTLTALEEMFQGARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKHIIKTSL 926
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMV RQRTAFPPNFVHSLDGSHMMMTAVACK+ GL+FAGVHDSYWTHAC
Sbjct: 927 QILTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLSFAGVHDSYWTHAC 986
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MNRILR KFVELYETP+LENLLE FQ
Sbjct: 987 DVDKMNRILREKFVELYETPVLENLLESFQ 1016
>K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1015
Score = 1233 bits (3189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/690 (84%), Positives = 629/690 (91%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE +A ES +IKE++KLRKKVIDLMKKQK+ AVRG++K +
Sbjct: 296 EVRIHKFLEKTKKKKGDRSKKNKASESVADIKEEQKLRKKVIDLMKKQKLVAVRGLVKGK 355
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+DTKPWG ++TKVGSRL+ELLMQTAYIQPP DQ++D +PDIRPAFVHSFRTV K + K
Sbjct: 356 DDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFRTVAKVSAKA 415
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
+++GI++CDPLILKGL+R+AKNMVIPYMPMLVPPVNW+GYDKGGHLFLPSYVMRTHG +
Sbjct: 416 SKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPSYVMRTHGAR 475
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKRAP+KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR+ADLVDRDDVPL
Sbjct: 476 QQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPL 535
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
P++P TDDE +I ENRERYSQRCDIELKLAVARKMKDEE FYYPHN+DF
Sbjct: 536 PDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDF 595
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHPHLNHLGSD+CRGILEFA+GR LGKSG QWLKIHLANLYAGGVDKLS EGR+
Sbjct: 596 RGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGVDKLSHEGRL 655
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
FTE+H +DIFDSADKPL+GRRWWL AEDP QCLAVCITLTEALRSSSPETFISHIPVHQ
Sbjct: 656 VFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFISHIPVHQ 715
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV +IM+ DAQKDPAIFPDA
Sbjct: 716 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVSNIMQRDAQKDPAIFPDA 775
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER+ SDDT+LFGASCYAAK
Sbjct: 776 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTELFGASCYAAK 835
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTALEEMFQGAR IMNWLG+CAKVIASENQPVRWTTPLGLPVVQPYRKLG+HIIKTSL
Sbjct: 836 VTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKHIIKTSL 895
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
QMLTLQRETDKVMV RQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 896 QMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLNFAGVHDSYWTHAC 955
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MNRILR KFVELYETP+LENLLE FQ
Sbjct: 956 DVDKMNRILREKFVELYETPVLENLLESFQ 985
>K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 998
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/690 (82%), Positives = 612/690 (88%), Gaps = 17/690 (2%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE +A ES +IKE++KLRKKVIDLMKKQK+ AVRG++K +
Sbjct: 296 EVRIHKFLEKTKKKKGDRSKKNKASESVADIKEEQKLRKKVIDLMKKQKLVAVRGLVKGK 355
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+DTKPWG ++TKVGSRL+ELLMQTAYIQPP DQ++D +PDIRPAFVHSFRTV K + K
Sbjct: 356 DDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFRTVAKVSAKA 415
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
+++GI++CDPLILKGL+R+AKNMVIPYMPMLVPPVNW+GYDKGGHLFLPSYVMRTHG +
Sbjct: 416 SKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPSYVMRTHGAR 475
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKRAP+KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR+ADLVDRDDVPL
Sbjct: 476 QQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPL 535
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
P++P TDDE +I ENRERYSQRCDIELKLAVARKMKDEE FYYPHN+DF
Sbjct: 536 PDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDF 595
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHPHLNHLGSD+CRGILEFA+GR LGKSG QWLKIHLANLYAGGVDKLS EGR+
Sbjct: 596 RGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGVDKLSHEGRL 655
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
FTE+H +DIFDSADKPL+GRRWWL AEDP QCLAVCITLTEALRSSSPETFISHIPVHQ
Sbjct: 656 VFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFISHIPVHQ 715
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
LGAAAVNLVAGEKPADVYSGIAARV +IM+ DAQKDPAIFPDA
Sbjct: 716 -----------------LGAAAVNLVAGEKPADVYSGIAARVSNIMQRDAQKDPAIFPDA 758
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER+ SDDT+LFGASCYAAK
Sbjct: 759 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTELFGASCYAAK 818
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTALEEMFQGAR IMNWLG+CAKVIASENQPVRWTTPLGLPVVQPYRKLG+HIIKTSL
Sbjct: 819 VTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKHIIKTSL 878
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
QMLTLQRETDKVMV RQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 879 QMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLNFAGVHDSYWTHAC 938
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MNRILR KFVELYETP+LENLLE FQ
Sbjct: 939 DVDKMNRILREKFVELYETPVLENLLESFQ 968
>M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000719mg PE=4 SV=1
Length = 1024
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/691 (77%), Positives = 604/691 (87%), Gaps = 2/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE E GES KE EKL KKV +LMKKQK+ AVRGI+
Sbjct: 307 EVRIHKFLEMTRKKKVDKDQ--ENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKH 364
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ +K W R KVGSRL+ELL QTA+IQPP+DQ+ DG PDIRPAFVH+FRTV K+AK
Sbjct: 365 DASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNA 424
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+IECDPL+LKGL+++A++MVIPYMPMLVPP+NWTGYDKGG+ FLPSYVMR HG +
Sbjct: 425 SRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGAR 484
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+KR P++QLEPVF+ALD LG+T+WRVNK+VLSVVDRIWASGG LADLVDR+DVPL
Sbjct: 485 QQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPL 544
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PEEPDT+DE + EN ER+SQRCD ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 545 PEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDF 604
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSDVCRGILEF +GRPLGKSG WLKIHLANLYAGGVDKLSLEGR+
Sbjct: 605 RGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRI 664
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H+DDIFDS DKPLEGRRWWL AEDPFQCLAVCI L EALRSSSPETFISHIPVHQ
Sbjct: 665 AFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQ 724
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVL+IMR DAQKDP +FP+A
Sbjct: 725 DGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEA 784
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L A+ L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER SDD ++FG +CYAAK
Sbjct: 785 LRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAK 844
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
+TLTAL EMF+ AR IM+WLGECAK+IASENQPVRWTTPLGLPVVQPYRK GRH+IKTSL
Sbjct: 845 ITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSL 904
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRET+KVMVKRQRTAFPPNFVHSLD SHMMMTA+ACK+AGL+FAGVHDSYWTHAC
Sbjct: 905 QVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHAC 964
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD+MN+ILR KFV+LYETPILENLLE FQ+
Sbjct: 965 DVDEMNKILREKFVQLYETPILENLLESFQQ 995
>D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_14s0083g00790 PE=2 SV=1
Length = 1035
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/692 (77%), Positives = 609/692 (88%), Gaps = 1/692 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE E G I E EKLRKKV +LMKKQK+ A R I+K
Sbjct: 315 EVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGH 374
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSD-QIVDGSPDIRPAFVHSFRTVTKEAKK 143
+++KPWGP + KVGSRL+ELLMQTAYIQPP D Q+ D PDIRPAFVH+F+TV +EAKK
Sbjct: 375 DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKK 434
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
GR+FG+IECDPL+ KGL+R+A++MVIPY+PMLVPP+ WTGYDKG HLFLPSYVMRTHG
Sbjct: 435 IGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGA 494
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQREAVKRAP+ QLEPVFEAL+TLG+TKWR+NK++ VVDRIWA GG LADLVDR+DVP
Sbjct: 495 RQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVP 554
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+PDT+DEAQ+ N ER+SQRCDIELKLAVARKMKDE+ F+YPHN+D
Sbjct: 555 LPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 614
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLG SG WLKIHLANL+AGGVDKLS EGR
Sbjct: 615 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGR 674
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++FTE+H+DDIFDSAD+PLEG+RWWLNAEDPFQ LA CI L+EALRSSSPET ISHIPVH
Sbjct: 675 ITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVH 734
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIAARVLDIM+ DA+KDPAIFPD
Sbjct: 735 QDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPD 794
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER+ +DD +LFGA+CYAA
Sbjct: 795 ALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAA 854
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
K+TLTAL EMFQ ARSIM+WLG+CAK+IASENQPVRWTTPLGLPVVQPYRKLGRH+IKTS
Sbjct: 855 KITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTS 914
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+LTLQRET+ +MVKRQRTAFPPNFVHSLDGSHMMMTA+ACK+AGL FAGVHDSYWTHA
Sbjct: 915 LQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHA 974
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQK 715
CDVD+MNR+LR KFV+LYETPILENLLE FQ+
Sbjct: 975 CDVDEMNRLLREKFVQLYETPILENLLESFQQ 1006
>B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_746127 PE=3 SV=1
Length = 847
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/709 (75%), Positives = 616/709 (86%), Gaps = 8/709 (1%)
Query: 14 ATLCCAYCLM-----LQVRIHKFLEXXXXXXXXXXXXXEA--GESATEIKEDEKLRKKVI 66
A + A C++ ++RIH FLE + GES + E+EKLRKKV
Sbjct: 111 ARVVAAACMIGDAIEQEIRIHNFLEKTRKKKENADNSKNSVEGESPAVMNEEEKLRKKVT 170
Query: 67 DLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI 126
DL+KKQK+ AVR I+K +D+K W + KVGSRL+ELL+QTAYIQPP DQ+ D PD+
Sbjct: 171 DLIKKQKLPAVRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLADSPPDL 230
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYD 186
RPAFVH+FRTV+ E KKT RK+G+I+CD L+LKGL+++ +++VIPYMPMLVPP+ W GYD
Sbjct: 231 RPAFVHTFRTVSYENKKTSRKYGVIQCDSLVLKGLEQTDRHIVIPYMPMLVPPLRWRGYD 290
Query: 187 KGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRI 246
KG HLFLPSYVMR HG KQQREAVKR PKKQL+ VFEALDTLG+TKWRVNK+VLSVVDRI
Sbjct: 291 KGAHLFLPSYVMRIHGAKQQREAVKRTPKKQLQLVFEALDTLGNTKWRVNKRVLSVVDRI 350
Query: 247 WASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAV 306
W +GGRLADLVDR DVPLPE+P+T+DEA + ENRER+S+RCD ELK+AV
Sbjct: 351 WNNGGRLADLVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDTELKIAV 410
Query: 307 ARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIH 366
ARKMK+EE FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG +WLKIH
Sbjct: 411 ARKMKNEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 470
Query: 367 LANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTE 426
LANL+A GVDKLS EGR++FTE+H+DDIFDSADKPLEG+RWWL+AEDPFQCLAVCI LTE
Sbjct: 471 LANLFACGVDKLSHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAEDPFQCLAVCINLTE 530
Query: 427 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 486
ALRSSSPET +SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP DVYSGIAARV
Sbjct: 531 ALRSSSPETCLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYSGIAARV 590
Query: 487 LDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER 546
LDIMRSDAQ+DP +FPDAL AR L++QVDRKLVKQTVMTSVYGVTYIGAR+QI+RRLKER
Sbjct: 591 LDIMRSDAQEDPEVFPDALRARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIERRLKER 650
Query: 547 DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGL 606
+ +D++++FG SCYAAKVTLTAL EMF+ ARSIMNWLGECAK+IASEN+PVRWTTPLGL
Sbjct: 651 GL-TDNSEIFGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKIIASENEPVRWTTPLGL 709
Query: 607 PVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 666
PVVQPYRKLG+H+IKTSLQ LTLQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 710 PVVQPYRKLGKHVIKTSLQFLTLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 769
Query: 667 QAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
+AGL FAGVHDSYWTHACDVD+MNRILR KFVELYETPIL+NLLE FQK
Sbjct: 770 RAGLKFAGVHDSYWTHACDVDEMNRILREKFVELYETPILKNLLESFQK 818
>B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_28503 PE=2 SV=1
Length = 983
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/691 (76%), Positives = 604/691 (87%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE E G + KE E+LRKKV DLMKKQKI VR I+K Q
Sbjct: 264 EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQ 323
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+++KPWG KVGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV +E +K+
Sbjct: 324 DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 383
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG +
Sbjct: 384 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 443
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+AV+RAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 444 QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 503
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE ++ EN ER+SQRCD+ELKLAVARKMKDE+ FYYPHN+DF
Sbjct: 504 PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 563
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 564 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 623
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQ
Sbjct: 624 AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 683
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV++IM++DA KDPA PDA
Sbjct: 684 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDA 743
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAK
Sbjct: 744 ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 803
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 804 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 863
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 864 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 923
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 924 DVDTMNKILREKFVELYDTPILENLLESFEK 954
>Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT1 PE=2 SV=1
Length = 1017
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/691 (76%), Positives = 604/691 (87%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE E G + KE E+LRKKV DLMKKQKI VR I+K Q
Sbjct: 298 EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQ 357
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+++KPWG KVGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV +E +K+
Sbjct: 358 DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 417
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG +
Sbjct: 418 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 477
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+AV+RAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 478 QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 537
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE ++ EN ER+SQRCD+ELKLAVARKMKDE+ FYYPHN+DF
Sbjct: 538 PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 597
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 598 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 657
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQ
Sbjct: 658 AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 717
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV++IM++DA KDPA PDA
Sbjct: 718 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDA 777
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAK
Sbjct: 778 ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 837
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 838 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 897
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 898 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 957
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 958 DVDTMNKILREKFVELYDTPILENLLESFEK 988
>B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_765989 PE=3 SV=1
Length = 877
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/695 (76%), Positives = 601/695 (86%), Gaps = 8/695 (1%)
Query: 27 RIHKFLEXXXXXXXXXXXXXEAGESATEI-------KEDEKLRKKVIDLMKKQKIAAVRG 79
RIHKFLE E GES I KE EKLRKKV L+KKQK+ VR
Sbjct: 154 RIHKFLEKTKKRKNVEAKISE-GESDAAIEEGEKLSKEQEKLRKKVTTLIKKQKVQQVRR 212
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I+K +D++PWG KVGSRL++L+++TAYIQPP DQI DG PDIRPAFVH+ +T+TK
Sbjct: 213 IVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTITK 272
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
+ +K+ R++G+IECDPL+ KGL++SA++MVIPYMPMLVPP+NWTGYD+G HLFLPSYVMR
Sbjct: 273 DTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLFLPSYVMR 332
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
HG KQQR+AVKRA + QLEPVF+ALDTLG+TKWR+NK+VL VVDRIWASGG LA LVDR
Sbjct: 333 IHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWASGGHLAGLVDR 392
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
+D PLPEEP T+DEA+I EN ER+SQRCDIELKLAVARKMKDEE FYYP
Sbjct: 393 EDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVARKMKDEEGFYYP 452
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYPMHP+LNHLGSDVCRGILEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS
Sbjct: 453 HNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLS 512
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+GR+SFTE+H+DDIFDSAD+PLEGRRWWL AEDPFQCLA CI L+EALRS SPET SH
Sbjct: 513 YDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSPETATSH 572
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDGSCNGLQHYAALGRDKLGAAAVNLV GEKPADVYSGIA RVLDIM+ DA+KDPA
Sbjct: 573 TPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRDAEKDPA 632
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
I P+++HA+ LVNQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER + +DD +L+ A+
Sbjct: 633 INPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADDPQLYSAA 692
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHI 619
CYAAK TL ALEEMF+GAR IM WLGECAKVIASENQPVRWTTPLGLPVVQPYR+LGRH+
Sbjct: 693 CYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHL 752
Query: 620 IKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSY 679
IKTSLQ+LTL+RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+AGL FAGVHDSY
Sbjct: 753 IKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDSY 812
Query: 680 WTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
WTHACDVD+MNRILR KFVELYE PILENLLE FQ
Sbjct: 813 WTHACDVDEMNRILREKFVELYEAPILENLLESFQ 847
>J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB09G11010 PE=3 SV=1
Length = 963
Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/691 (76%), Positives = 603/691 (87%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VR+HKFLE E + KE E+LRKKV DLMKK K+ VR I+K Q
Sbjct: 244 EVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQ 303
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+++KPWG + KVGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV KE +K+
Sbjct: 304 DNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKS 363
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG +
Sbjct: 364 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 423
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKRAP++Q++ VFEALDTLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 424 QQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVAL 483
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 484 PEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 543
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 544 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 603
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQ
Sbjct: 604 AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 663
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RVL+IMR+DA KDPA PDA
Sbjct: 664 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDA 723
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR LV+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAK
Sbjct: 724 ARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAK 783
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAK+IA EN+PV+WTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 784 VTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSL 843
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 844 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 903
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLL F+K
Sbjct: 904 DVDTMNKILREKFVELYDTPILENLLGSFEK 934
>F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_01s0010g00690 PE=3 SV=1
Length = 978
Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/691 (77%), Positives = 606/691 (87%), Gaps = 2/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRI +F+E G S KE EKLRKKV LMKKQK+ VR I+K Q
Sbjct: 261 EVRIQRFMEKTKKKSASSNNPD--GGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQ 318
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D+KPWG KVGSRL+ELL++TAYIQPP+DQ+ DG PDIRPAFVH+ +TV KE +K
Sbjct: 319 DDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKG 378
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+IECDPL+ KGL+++A++MVIPYMPMLVPP+NWTGYDKG +LFLPSYVMR HG +
Sbjct: 379 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAR 438
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+KRAP+K LEP FEAL+TLG+TKWR+NK+VL V+DRIWASGGRLADLVDR+DVPL
Sbjct: 439 QQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPL 498
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PEEPDT+DEA+I EN ER+SQRCDIELKLAVARKMKDE+ F+YPHN+DF
Sbjct: 499 PEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDF 558
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG +WLKIHLAN+YAGGVDKLS EGRV
Sbjct: 559 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRV 618
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEGRRWWL+AEDPFQCLA CI L+EALRSSSPET ISH+PVHQ
Sbjct: 619 AFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQ 678
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM+ DAQKDPA P+A
Sbjct: 679 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNA 738
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +D+ ++F ASCYAAK
Sbjct: 739 LRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAK 798
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TLTAL EMF+ ARSIM+WLG+CAKVIASEN PVRW TPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 799 TTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSL 858
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+L+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC++AGL FAGVHDSYWTHAC
Sbjct: 859 QVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHAC 918
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD+MNRILR KFVELY PILENLLEGFQK
Sbjct: 919 DVDEMNRILREKFVELYGMPILENLLEGFQK 949
>I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 993
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/691 (76%), Positives = 604/691 (87%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE E G + KE E+LRKKV DLMKKQKI VR I+K Q
Sbjct: 274 EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQ 333
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+++KPWG KVGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV +E +K+
Sbjct: 334 DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 393
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG +
Sbjct: 394 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 453
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+AV+RAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 454 QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 513
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE ++ EN ER+SQRCD+ELKLAVARKMKDE+ FYYPHN+DF
Sbjct: 514 PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 573
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 574 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 633
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQ
Sbjct: 634 AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 693
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV++IM++DA KDP+ PDA
Sbjct: 694 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPSTDPDA 753
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAK
Sbjct: 754 ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 813
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 814 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 873
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 874 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 933
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 934 DVDTMNKILREKFVELYDTPILENLLESFEK 964
>B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_769753 PE=3 SV=1
Length = 852
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/697 (76%), Positives = 600/697 (86%), Gaps = 8/697 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-------KEDEKLRKKVIDLMKKQKIAAV 77
+ +IHKFLE E GES I KE EKLRKKV LMKKQK+ V
Sbjct: 127 EAKIHKFLEKTKKRKNLKEKISE-GESVAAIYEGEKLTKEQEKLRKKVTTLMKKQKVHQV 185
Query: 78 RGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTV 137
R I+K +D+ PWG KVGSRL++L+++TAYIQPP DQI DG PDIRPAFVH+ +T+
Sbjct: 186 RRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTI 245
Query: 138 TKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYV 197
TK+ +K+ R++G+IECDPL+ KGL++SA++MVIPYMPMLVPP+NWTGYD+G + FLPSYV
Sbjct: 246 TKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFLPSYV 305
Query: 198 MRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV 257
MR HG KQQR A+KRA + QLEPVF+ALDTLG+TKWRVNK++L V+DRIWASGG LA LV
Sbjct: 306 MRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWASGGHLAGLV 365
Query: 258 DRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
DR+DVPLPEEP T+DEA+I EN ER+SQRCD+ELKLAVARKMKDEE FY
Sbjct: 366 DREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFY 425
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
YPHNVDFRGRAYPMHP+LNHLGSDVCRGILEFA+GRPLGKSG +WLKIHLANLYAGGVDK
Sbjct: 426 YPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 485
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
LS +GR+SFTE+H+DDIFDSAD+PLEG+RWWL AEDPFQCLAVCI L+EALRS SPET I
Sbjct: 486 LSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSPETAI 545
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
SH PVHQDGSCNGLQHYAALGRDKLGAAAVNLV G KPADVYSGIAARVLDIMR DA+ D
Sbjct: 546 SHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLDIMRRDAEND 605
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
PAI P+++HA+ L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +DD +L+
Sbjct: 606 PAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCNIADDPQLYS 665
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR 617
A+CYAAK TLTALEEMF+GAR IM WLGECAKVIASENQPV+WTTP GLPVVQPYR+LGR
Sbjct: 666 AACYAAKTTLTALEEMFEGARGIMAWLGECAKVIASENQPVQWTTPFGLPVVQPYRQLGR 725
Query: 618 HIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHD 677
+IKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+AGL FAGVHD
Sbjct: 726 QLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHD 785
Query: 678 SYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SYWTHACDVD+MNRILR KFVELYETPILENLLE FQ
Sbjct: 786 SYWTHACDVDEMNRILREKFVELYETPILENLLESFQ 822
>C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb02g039520 PE=3 SV=1
Length = 976
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/692 (76%), Positives = 603/692 (87%), Gaps = 1/692 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKD 83
+VRI++FLE E T+I KE ++LRKKV DLMKKQK+ VR I+K+
Sbjct: 256 EVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVKN 315
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKK 143
Q++++PWG ++ KVGSRL+EL M TA+IQPP+ Q DG PDIRPAF H RTV KE +K
Sbjct: 316 QDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQK 375
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+ R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+ WTGYDKG HLFLPSYVMRTHG
Sbjct: 376 SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGA 435
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQREAVKRAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DVP
Sbjct: 436 RQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVP 495
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+PDT+DE I EN ER+SQRCD+ELKLAVARKMKDEE FYYPHN+D
Sbjct: 496 LPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 555
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG WLKIHLANLYAGGVDKLS +GR
Sbjct: 556 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 615
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
V+FTE+H+++IFDSAD+PLEG+RWWL AEDPFQCLAVC+ LTEALRSSSPET ISHIPVH
Sbjct: 616 VAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVH 675
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RVL+IMR DAQKDP+I PD
Sbjct: 676 QDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPD 735
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AR +V+QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER V D+ +LFGASCYAA
Sbjct: 736 VARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAA 795
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL EMFQ AR IMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTS
Sbjct: 796 KVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTS 855
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHA
Sbjct: 856 LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHA 915
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQK 715
CDVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 916 CDVDTMNKILREKFVELYDTPILENLLESFEK 947
>M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000780mg PE=4 SV=1
Length = 1006
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/704 (75%), Positives = 603/704 (85%), Gaps = 13/704 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-------------KEDEKLRKKVIDLMKK 71
+VRIH+FLE EA I KE E+LRKKV L+K+
Sbjct: 274 EVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKR 333
Query: 72 QKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFV 131
QK+ VRGI+K+Q D KPWG KVG RL++LLM TAYIQPP DQI DG PDIRPAFV
Sbjct: 334 QKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFV 393
Query: 132 HSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHL 191
H+ +T+T++ +KT R++G+IECDP++ KG++++A++MV+PYMPMLVPP+NWTGYD+G +L
Sbjct: 394 HNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYL 453
Query: 192 FLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG 251
FLPSYVMRTHG KQQRE VKR P+KQLEPVFEALDTLG TKWRVNK+VL V+DRIWASGG
Sbjct: 454 FLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGG 513
Query: 252 RLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMK 311
RLADLVDR+DVPLPEEPDT+DEA+I EN ER+SQRCDIELKLA +RKMK
Sbjct: 514 RLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMK 573
Query: 312 DEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLY 371
DEE FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEF++GR LGKSG +WLKIHLANLY
Sbjct: 574 DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLY 633
Query: 372 AGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSS 431
AGGVDKLS + R +FTE+HVD+IFDSAD+PLEGRRWWL AEDPFQCLA CI L EALRS
Sbjct: 634 AGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSP 693
Query: 432 SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR 491
SPET IS++PVHQDGSCNGLQHYAALGRDKLGAAAVNLV G+KPADVYSGIAARVLDIMR
Sbjct: 694 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMR 753
Query: 492 SDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSD 551
+DA+KDPA P+ALHAR L+NQVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER +D
Sbjct: 754 NDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIAD 813
Query: 552 DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQP 611
DT LF A+CYAA+ TLTAL EMF+ ARSIM+WLGECAKVIASENQPVRW TPLGLPVVQP
Sbjct: 814 DTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQP 873
Query: 612 YRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLA 671
YR+LGRH+IKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+AGL
Sbjct: 874 YRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 933
Query: 672 FAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
FAGVHDSYWTHACD+D+MNRILR KFVELYE PILENLLEGFQ+
Sbjct: 934 FAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQ 977
>K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria italica
GN=Si028824m.g PE=3 SV=1
Length = 972
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/691 (75%), Positives = 597/691 (86%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH+FLE E + KE ++LRKKV DLMKKQK+ VR I+K+Q
Sbjct: 253 EVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQ 312
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D++PWG KVGSRL+EL ++TA+IQPP+ Q DG PDIRPAF H RTV KE +K
Sbjct: 313 DDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKH 372
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+ WTGYDKG HLFLPSYVMRTHG +
Sbjct: 373 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGAR 432
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKRAP++Q++ VFEAL+TLG TKWRVNK+VLS++DRIW+SGGRLADLVDR DVPL
Sbjct: 433 QQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPL 492
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE + N ER+SQRCD+ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 493 PEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 552
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLG+SG +WLKIHLANLYAGGVDKLS GR+
Sbjct: 553 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYAGRI 612
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F E+H+++IFDSAD+PLEG+RWWL AEDPFQCLAVC+ LTEALRS SPE ISHIPVHQ
Sbjct: 613 AFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQ 672
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYSGIA RV++IMR D+QKDP+ PDA
Sbjct: 673 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDA 732
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR +++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER V +DD +LFGASCYAAK
Sbjct: 733 ARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAK 792
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PV+WTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 793 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSL 852
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 853 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAC 912
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 913 DVDTMNKILREKFVELYDTPILENLLESFEK 943
>I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI4G08880 PE=3 SV=1
Length = 959
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/691 (75%), Positives = 598/691 (86%), Gaps = 2/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXX-XXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKD 83
+VRIHKFLE EAG+S KE ++LRKKV DLMKKQKI VR I+K
Sbjct: 240 EVRIHKFLEKTKKKNTKEVDNVVEAGDSDIA-KEQQRLRKKVTDLMKKQKIRQVRNIVKK 298
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKK 143
Q+ T+PWG KVGSRL+ELL++TA+IQPP Q D +PDIRPAF H RTVT+E +K
Sbjct: 299 QDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTVTREQQK 358
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+ R++G+I+CDPLI +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG
Sbjct: 359 SSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 418
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQREAVK+APK+Q++ +FEALDTLG TKWR+NKKVLS+VDRIW+SGGRLADLVDR DV
Sbjct: 419 RQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVDRTDVA 478
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+PDT+DE ++ EN ER+SQRCD+ELKLAVARKMKDE FYYPHN+D
Sbjct: 479 LPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYYPHNLD 538
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG SG WLKIHLANLYAGGVDKLS +GR
Sbjct: 539 FRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKLSYDGR 598
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++FTE+H++DIFDSA++PLEG+RWWL AEDPFQCLAVC+ LTEALRSSSPE ISHIPVH
Sbjct: 599 IAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMISHIPVH 658
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIA RV++IMR DAQKDPA+ PD
Sbjct: 659 QDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDPALDPD 718
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
A AR LV+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER V DD++LF ASCYAA
Sbjct: 719 AARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAASCYAA 778
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL EMF+ ARSIMNWLG+CAKVIA EN+PVRW TPLGLPVVQPYRKLGRH+IKTS
Sbjct: 779 KVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGRHLIKTS 838
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC + GL FAGVHDSYWTHA
Sbjct: 839 LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKQGLYFAGVHDSYWTHA 898
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
CDVD MN+ILR KFVELY+ PILENLL+ F+
Sbjct: 899 CDVDTMNKILREKFVELYDAPILENLLDSFE 929
>M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 963
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/690 (75%), Positives = 592/690 (85%), Gaps = 2/690 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ RIH+FLE E E KE++ LRKKV DLMKKQK+ VR I++ Q
Sbjct: 246 EARIHRFLEKTRKKTSKDQTSDEV-EGGAVTKEEQILRKKVTDLMKKQKVQQVRKIVRGQ 304
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ +KPWG + KVGSRL+EL M+TA+IQPP Q DG PDIRPAF R V+ E KT
Sbjct: 305 DVSKPWGQDAQVKVGSRLIELFMETAFIQPPVSQSADGPPDIRPAFRRVIRIVSSEQLKT 364
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R +GIIECDPL+ +GLDR+A++MVIPYMPML+PP+NW GYD+G HL LPSY+MR HG +
Sbjct: 365 KR-YGIIECDPLVRQGLDRTARHMVIPYMPMLMPPLNWKGYDRGAHLILPSYIMRIHGAR 423
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+KRAPKKQ++ VF+ALDTLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR+D+PL
Sbjct: 424 QQREALKRAPKKQMQAVFQALDTLGCTKWRVNKRVLSIVDRIWSSGGRLADLVDREDIPL 483
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE+++ EN ER+S+RCD+ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 484 PEKPDTEDESELRKWKWKMRSVKKENSERHSRRCDVELKLAVARKMKDEEGFYYPHNLDF 543
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEFA+GRPL KSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 544 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLMKSGLRWLKIHLANLYAGGVDKLSYDGRL 603
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+HV+DIFDSAD+PLEGRRWWL AEDPFQCLAVCI L EALRSSSPET ISHIPVHQ
Sbjct: 604 AFTENHVEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHIPVHQ 663
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYSGIAARVLDIMR D+QKDPA P+A
Sbjct: 664 DGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLDIMRRDSQKDPAEDPNA 723
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR +V+QVDRKLVKQTVMTSVYGVT+IGAREQIK+RLKER V +DD +LFGAS YAA+
Sbjct: 724 LLARLIVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLKERGVTADDRELFGASSYAAR 783
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TLTALEEMF+ AR IMNWLG+CAKVIA+EN VRWTTPLGLPVVQPYR LG+HI+KTSL
Sbjct: 784 TTLTALEEMFEAARKIMNWLGDCAKVIATENHSVRWTTPLGLPVVQPYRALGKHIVKTSL 843
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMV+RQRTAFPPNFVHSLDGSHMMMTAVAC++AGL FAGVHDSYWTHAC
Sbjct: 844 QVLTLQRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLIFAGVHDSYWTHAC 903
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MNRILR KFVELYE PILENLLE FQ
Sbjct: 904 DVDQMNRILREKFVELYEKPILENLLESFQ 933
>K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc02g089340.2 PE=3 SV=1
Length = 711
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/695 (75%), Positives = 584/695 (84%), Gaps = 15/695 (2%)
Query: 20 YCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRG 79
+ LM QVRIHKFLE E GE AT E +KL KKV LMKKQK+ AV
Sbjct: 2 HFLMHQVRIHKFLEKTEKHKAEKDRNMEDGEHAT--LEQKKLHKKVTSLMKKQKLRAVNQ 59
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I++ Q+D+KPWG + KVGSRL+E L+QTAYIQ P+DQ+ PDIRPAF+HS RT+ K
Sbjct: 60 IVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAK 119
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
E K R++G+I+CD L+ KGL+R+A++MVIPYMPMLVPPV WTGYDKGGHL+LPSYVMR
Sbjct: 120 ETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMR 179
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
THG +QQREAVKR + QL+PVFEALDTLG TKWR+NK+VLSVVDRIWA GGRLADLVDR
Sbjct: 180 THGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDR 239
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
DDVPLPEEPDT+DEA ENRER+SQRCDIELKLAVA +MKDEE F+YP
Sbjct: 240 DDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYP 299
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HNVDFRGRAYPMHPHLNHLGSD+CRG+LEFA GRPLGKSG +K
Sbjct: 300 HNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLALVKDTPCKF--------- 350
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+SFTESH+DDIFDSADKPLEGR WWLNAEDPFQCLAVCI L+EA+RSSSPET ISH
Sbjct: 351 ----ISFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISH 406
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM DAQ+DPA
Sbjct: 407 VPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPA 466
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
FPDA+ AR LVNQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +DDT+LFGA+
Sbjct: 467 EFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAA 526
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHI 619
CYAAKVTLTAL EMF+ ARSIM WLGECAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH
Sbjct: 527 CYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHF 586
Query: 620 IKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSY 679
IKTSLQ+LTLQRET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AGL FAGVHDSY
Sbjct: 587 IKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSY 646
Query: 680 WTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
WTHACDVD +NRILR KFVELYETPILE LLEGFQ
Sbjct: 647 WTHACDVDKLNRILREKFVELYETPILEKLLEGFQ 681
>Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays GN=rpoT1 PE=2
SV=1
Length = 975
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/691 (74%), Positives = 596/691 (86%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRI++FLE E E ++LRKKV DLMKKQK+ VR I+K+Q
Sbjct: 256 EVRINRFLEKTRKKNNKEMENEEEAGDTNIAVEQQRLRKKVTDLMKKQKLRQVRNIVKNQ 315
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ ++PWG KVGSRL++L + TA+IQPP+ Q DG PDIRPAF H RT+ KE +K+
Sbjct: 316 DKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKEQQKS 375
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+ WTGYDKG HLFLPSYVMRTHG +
Sbjct: 376 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGAR 435
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+AVKRAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW++GGRLADLVDR DVP+
Sbjct: 436 QQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRTDVPV 495
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE + +N ER+SQRCD+ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 496 PEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 555
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYA GVDKLS +GR+
Sbjct: 556 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRI 615
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F E+H+++IFDSAD+PLEGRRW L AEDPFQCLAVC+ LTEALRSSSPET ISHIPVHQ
Sbjct: 616 AFAENHLEEIFDSADRPLEGRRWRLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQ 675
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALG+DKLGA AVNLVAGEKPADVY+GIA RV++IMR DAQKDP++ PDA
Sbjct: 676 DGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDA 735
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR +V+QVDRKLVKQTVMTSVYGVTYIGAREQI+RRLKER V +D++LFGASCYAAK
Sbjct: 736 ARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASCYAAK 795
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 796 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 855
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHA
Sbjct: 856 QVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHAS 915
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 916 DVDTMNKILREKFVELYDTPILENLLESFEK 946
>B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_1466350 PE=3 SV=1
Length = 997
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/698 (74%), Positives = 596/698 (85%), Gaps = 7/698 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAG-------ESATEIKEDEKLRKKVIDLMKKQKIAAV 77
+ RIH+FLE G ++ KE EKLRKKV +LMKKQK+ V
Sbjct: 271 EARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMKKQKVQQV 330
Query: 78 RGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTV 137
RG+ K +D+ PWG + KVG RL++LL++TAYIQPP +Q+ DG PDIRPAF+H+ + V
Sbjct: 331 RGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNV 390
Query: 138 TKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYV 197
K+ +KT R++G+IECDP++ GL++SA++MVIPYMPMLVPP+NW GYD+G +LFLPSYV
Sbjct: 391 MKDTQKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYV 450
Query: 198 MRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV 257
MRTHG KQQR AVKR P KQLEPV+EAL+TLG+TKWR+NKK+L+VVDRIWA+GGRLA L+
Sbjct: 451 MRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGGRLAGLI 510
Query: 258 DRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
DR+D PLPEE +T+DE +I EN ER+SQRCDIELKLAVARKMKDE+ FY
Sbjct: 511 DREDEPLPEELETEDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMKDEDGFY 570
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
YPHN+DFRGRAYPMHPHLNHLGSD+CRGILEFA+GRPLGKSG +WLKIHLAN+YAGGVDK
Sbjct: 571 YPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDK 630
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
LS EGRV+FTE+H+D IFDSAD+PLEGRRWWL AEDPFQCLA C L EA RSSSPET I
Sbjct: 631 LSYEGRVAFTENHLDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTI 690
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLV+GEKPADVYSGIAARVLDIMR+DA+KD
Sbjct: 691 SHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKD 750
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
P P+ALHA+ L+N+VDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKERD +DD L+
Sbjct: 751 PGTNPNALHAKLLINEVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYA 810
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR 617
ASCYAAK TL ALEEMF+GARSIM WLGECAKVIASENQPV+WTTPLGLPVVQPYR+LGR
Sbjct: 811 ASCYAAKTTLMALEEMFEGARSIMAWLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGR 870
Query: 618 HIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHD 677
H+IKTSLQML LQ+ETDK+MVKRQRTAFPPNFVHSLDGSHMMMTAVACK AGL FAGVHD
Sbjct: 871 HLIKTSLQMLALQKETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHD 930
Query: 678 SYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SYWTHACDVD+MNRILR FVELYE PILENLLEGFQK
Sbjct: 931 SYWTHACDVDEMNRILRENFVELYEAPILENLLEGFQK 968
>K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc05g010660.2 PE=3 SV=1
Length = 993
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/691 (74%), Positives = 597/691 (86%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ RIH+FLE AG+ +KE E+LRKKV LMKKQK+ VR I+K Q
Sbjct: 279 EARIHRFLEKTKKNALDGSLEETAGDI---MKERERLRKKVKILMKKQKLQQVRKIVKQQ 335
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D KPWG KVG RL+++L++TAYIQPP+DQ+ D PDIRPAF+H+ +TV + K
Sbjct: 336 DDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTV--DTVKG 393
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ KGLD++A++MVIPYMPMLVPP NW+GYD+G +LFLPSY+MRTHG K
Sbjct: 394 SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAK 453
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKR PKKQLEPVF+ALDTLG+TKWRVNK+VL ++DRIWASGGRLADLVDR+DVPL
Sbjct: 454 QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPL 513
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PEEPDT++E +I EN ER+SQRCDIELKLAVARKMKDEE FYYPHN+DF
Sbjct: 514 PEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDF 573
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEF++GRPLGKSG +WLKIHLAN+Y GGVDKLS EGR
Sbjct: 574 RGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRA 633
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F+E+HV+DIFDSAD+PLEGRRWWL AEDPFQCLA CI+++EALRS SPET ISH+P+HQ
Sbjct: 634 AFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQ 693
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+ DA KDPA P+
Sbjct: 694 DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNV 753
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
+ AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER DD +LF A+CYAAK
Sbjct: 754 MRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAK 813
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TLTAL EMF+ ARSIM+WLG+CAK+IA ENQPVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 814 TTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSL 873
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK+AGL+FAGVHDSYWTHA
Sbjct: 874 QILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHAS 933
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MN+ILR KFVELY+ PILENLLE FQ+
Sbjct: 934 DVDQMNKILREKFVELYDAPILENLLESFQQ 964
>Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia oleracea GN=rpoT2
PE=2 SV=1
Length = 1036
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/691 (73%), Positives = 587/691 (84%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE + S EI+E + LRK V +L+KKQK I+ Q
Sbjct: 317 EVRIHTFLEKAKKKKGDRSKKPDDAASDAEIQEQQHLRKNVNNLIKKQKRRQALKIVDSQ 376
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
D KPWG R KVGSRL+ELL+QTAYIQPP+ Q PD+RPAFVHS ++V E KKT
Sbjct: 377 GDLKPWGSETRAKVGSRLIELLIQTAYIQPPASQSACDPPDLRPAFVHSLKSVGPENKKT 436
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
GR+FG+IECDPLI+KGL+++ +++VIPYMPMLVPP WTGYDKG +L L S+VMRTHG K
Sbjct: 437 GRRFGMIECDPLIIKGLEKTPRHIVIPYMPMLVPPEKWTGYDKGAYLVLRSFVMRTHGSK 496
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QR AV+RA ++QL+ VFEALDTLG+TKWRVNKKVLS+VDR+WA+GGRLADLVDRDDVPL
Sbjct: 497 HQRVAVRRASEEQLKSVFEALDTLGNTKWRVNKKVLSIVDRVWANGGRLADLVDRDDVPL 556
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE+++ ENRER+SQRCD+ELKLAVARKMKDEE F+YPHNVDF
Sbjct: 557 PEKPDTEDESELKRWKWKVRSLKKENRERHSQRCDVELKLAVARKMKDEEGFFYPHNVDF 616
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEFA+GR +GKSG +WLKIH+ANLYAGG+DKLSLEGR+
Sbjct: 617 RGRAYPMHPYLNHLGSDMCRGILEFAEGRAVGKSGLRWLKIHVANLYAGGIDKLSLEGRI 676
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H+DDIFDS DKPLEGR WWL AEDPFQCLAVCI L EALRS+ PE F SHIPVHQ
Sbjct: 677 AFTENHLDDIFDSVDKPLEGRCWWLKAEDPFQCLAVCIELAEALRSTRPEAFKSHIPVHQ 736
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA+RVL IM +DA+KDP FPD
Sbjct: 737 DGSCNGLQHYAALGRDELGATAVNLVAGEKPADVYSGIASRVLSIMEADAKKDPTDFPDT 796
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
+ AR L+NQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER FSDDT+++GA+CY A+
Sbjct: 797 VLARKLINQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAAFSDDTEIYGAACYVAR 856
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
+TLTAL EMFQ ARSIM+WLG+CAK+IASENQPVRW TPLGLPVVQPY K GRH+IKTSL
Sbjct: 857 ITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYCKKGRHLIKTSL 916
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
QMLTL++ET+K+MV+RQ++AFPPNFVHSLDGSHMMMTAVACK AGL FAGVHDSYWTHAC
Sbjct: 917 QMLTLEKETEKIMVRRQKSAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHAC 976
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD M+ ILR KFVELY+ PILENLLE FQ+
Sbjct: 977 DVDQMSSILREKFVELYDQPILENLLETFQQ 1007
>Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=1
Length = 1005
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/690 (75%), Positives = 595/690 (86%), Gaps = 1/690 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE A KE E+LRKKV DLMKKQKI VR ++K Q
Sbjct: 287 EVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKKQ 346
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ T+PWG KVGSRL+EL ++TA+IQPP+ Q D +P+IRPAF H RTV +E +K+
Sbjct: 347 DSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQRKS 406
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+NWTGYDKG HLFLPSYVMRTHG +
Sbjct: 407 -RRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGAR 465
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVK+APK+Q++ +FEALD LG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 466 QQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKEVLSIVDRIWSSGGRLADLVDRADVSL 525
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMK+E FYYPHN+DF
Sbjct: 526 PEKPDTEDEAELKKWRWSMRSAEKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNLDF 585
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG+SG +WLKIHLANLY GGVDKLS +GR+
Sbjct: 586 RGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRI 645
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H+DDIFDSA++PLEG+RWWL AEDPFQCLAVC+ L EALRS SPET ISHIPVHQ
Sbjct: 646 AFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPVHQ 705
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIAARV++IM+ DAQKDPA DA
Sbjct: 706 DGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADA 765
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR LV+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER V +DD++LFGASCYAAK
Sbjct: 766 ARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAK 825
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMF+ ARSIM WLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 826 VTLTALGEMFEAARSIMTWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 885
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 886 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHAC 945
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MN+ILR KFVELY+ PILENLLE F+
Sbjct: 946 DVDTMNKILREKFVELYDAPILENLLESFE 975
>Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) OS=Hordeum
vulgare GN=rpoTm PE=2 SV=1
Length = 862
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/691 (74%), Positives = 596/691 (86%), Gaps = 4/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXX-XXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKD 83
+VRIHKFLE E G+S KE + LRKKV DLMKKQKI VR ++K
Sbjct: 145 EVRIHKFLEKTKKKNTKEVDKVVEPGDSDI-AKEQQLLRKKVTDLMKKQKIRQVRHLVKK 203
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKK 143
Q+ T+PWG KVGSRL+EL ++TA+IQPP+ Q D +P+IRPAF H RTV +E K
Sbjct: 204 QDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQK- 262
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+NWTGYDKG HLFLPSYVMRTHG
Sbjct: 263 -SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGA 321
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQREAVK+APK+Q++ +FEALD LG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV
Sbjct: 322 RQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRADVS 381
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMK+E FY+PHN+D
Sbjct: 382 LPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYHPHNLD 441
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG+SG +WLKIHLANLY GGVDKLS +GR
Sbjct: 442 FRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGR 501
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++FTE+H++DIFDSA++PLEG+RWWL AEDPFQCLAVC+ L EALRSSSPET ISHIPVH
Sbjct: 502 IAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHIPVH 561
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIAARV++IM+ DAQKDPA D
Sbjct: 562 QDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDAD 621
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
A AR LV+QVDR+LVKQTVMTSVYGVTY+GAREQIKRRLKER V +DD++LFGASCYAA
Sbjct: 622 AARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAA 681
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL EMF+ ARSIMNWLG+CAKVIA EN+PVRW TPLGLPVVQPYRKLGRH+IKTS
Sbjct: 682 KVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWKTPLGLPVVQPYRKLGRHLIKTS 741
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHA
Sbjct: 742 LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHA 801
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
CDVD MN+ILR KFVELY+ PILENLLE F+
Sbjct: 802 CDVDTMNKILREKFVELYDAPILENLLESFE 832
>P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopodium album PE=2
SV=1
Length = 988
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/693 (72%), Positives = 587/693 (84%), Gaps = 7/693 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ +I KFLE + +SA K ++L KKV LMKKQKI+ VR I++ Q
Sbjct: 272 EAKIRKFLEKSKKKPATNNNDED--DSA---KAQQRLAKKVTTLMKKQKISQVREIVRGQ 326
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKK- 143
+D+KPW + KVG +L++LL +TAYIQPP+DQ+ DG PDIRPAF+H+ +TV KE++K
Sbjct: 327 DDSKPWSQDNQVKVGCKLIQLLAETAYIQPPADQLADGPPDIRPAFIHTQKTVCKESQKG 386
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
R++G+IECDPL+ +GL+++A++MVIPYMPML+PP+NWTGYDKG +L+LPSY+MRTHGV
Sbjct: 387 LRRRYGVIECDPLVRRGLEKTARHMVIPYMPMLIPPLNWTGYDKGAYLYLPSYIMRTHGV 446
Query: 204 KQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
KQQR+A+KR + L VFEALDTLG+TKWRVNKKVLS++DRIWASGG LADLVDR+D+
Sbjct: 447 KQQRDAIKRVARDNNLCTVFEALDTLGNTKWRVNKKVLSIIDRIWASGGCLADLVDREDM 506
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
PLP EPDTDD +I +N ER+SQRCD ELKLAVARKMKDEE FYYPHN+
Sbjct: 507 PLPGEPDTDDAEEIKKWKWKVKHVKKDNAERHSQRCDTELKLAVARKMKDEEGFYYPHNL 566
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYPMHPHLNHLGSD+CRGILEFA+GRPLGKSG WLK+H+ANLYAGGVDKLS EG
Sbjct: 567 DFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKVHVANLYAGGVDKLSYEG 626
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
RV+FTE+ +DD+FDSAD+PLEGRRWWL AEDPFQCLA CI LT+ALRSSSPE ++SHIP+
Sbjct: 627 RVAFTENRLDDVFDSADRPLEGRRWWLTAEDPFQCLAACINLTDALRSSSPEDYLSHIPI 686
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDGSCNGLQHYAALGRDKLGA AVNLVAG KPADVYSGIAARV +IMR DA+KDP+I P
Sbjct: 687 HQDGSCNGLQHYAALGRDKLGAEAVNLVAGGKPADVYSGIAARVFEIMRGDAEKDPSIEP 746
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYA 562
+A HA+ L+NQVDRKLVKQTVMTSVYGVTYIG R+QIKRRLKERD DD LF ASCYA
Sbjct: 747 NAFHAKLLLNQVDRKLVKQTVMTSVYGVTYIGVRDQIKRRLKERDAIVDDNDLFAASCYA 806
Query: 563 AKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKT 622
AK T+TALEEMF+ ARSIM WLG+CAK+IASENQP RW+TPLGLPVVQPYR GR ++KT
Sbjct: 807 AKTTMTALEEMFEAARSIMGWLGDCAKIIASENQPARWSTPLGLPVVQPYRNHGRRLVKT 866
Query: 623 SLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
SLQ+LTL+ +TDKVM KRQRTAFPPNFVHSLDGSHMMMTA+ACK+AG+ FAGVHDSYWTH
Sbjct: 867 SLQVLTLRCDTDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGMNFAGVHDSYWTH 926
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
ACDVD MN+ILR KFVELYE PILENLLE FQ+
Sbjct: 927 ACDVDKMNQILREKFVELYEQPILENLLESFQE 959
>G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_8g065900 PE=3 SV=1
Length = 727
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/669 (74%), Positives = 578/669 (86%), Gaps = 1/669 (0%)
Query: 48 AGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLM 107
A E+ KE+++LR KV L+KKQK GI+K ++ KPWG + KVGSRL++LL+
Sbjct: 30 AEENEKLAKEEKRLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGSRLIQLLI 89
Query: 108 QTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKN 167
+TAY++PP+++ DG PDI PAF H+ +T++ ++ R++G+IECDP+I KGL+++A+N
Sbjct: 90 ETAYLEPPANKFGDGGPDIFPAFKHTLKTISNDSNNGSRRYGVIECDPMIQKGLEKTARN 149
Query: 168 MVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDT 227
MVIPYMPMLVPP NW GYDKG +LFLPSYVMR HG KQQR+A+K APK QL+ +FEAL+T
Sbjct: 150 MVIPYMPMLVPPNNWIGYDKGAYLFLPSYVMRIHGAKQQRDALKWAPKNQLDSIFEALNT 209
Query: 228 LGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXX 287
LG+TKWRVNK VL V+D+IWA+GGR+ADLVDRDD+PLPEE DT+DE++I
Sbjct: 210 LGNTKWRVNKSVLGVIDQIWANGGRVADLVDRDDLPLPEELDTEDESEIRKWKWKVKNVK 269
Query: 288 XENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGIL 347
EN ER+SQRCDIELKLAVARK+K+E+ FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGIL
Sbjct: 270 KENNERHSQRCDIELKLAVARKLKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 329
Query: 348 EFADGRPLGKSGRQWLKIHLANLYA-GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
EFA+GRPLGK G QWLKIHLANLYA GGVDKLS +GRV+FTE H+DDIFDSAD+PLEG+R
Sbjct: 330 EFAEGRPLGKKGLQWLKIHLANLYATGGVDKLSYDGRVAFTEDHLDDIFDSADRPLEGKR 389
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WWL AEDPFQCLA CI L+EALRS +PE +SH+PVHQDGSCNGLQHYAALGRDKLGA+A
Sbjct: 390 WWLQAEDPFQCLAACINLSEALRSPNPEATLSHMPVHQDGSCNGLQHYAALGRDKLGASA 449
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPADVYSGIAARVL IM+ DA KDPA P ALHAR L+NQVDRKLVKQTVMTS
Sbjct: 450 VNLVGGDKPADVYSGIAARVLQIMKRDALKDPATDPHALHARRLINQVDRKLVKQTVMTS 509
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QIKRRLKER DD++LF ASCYAAK TLTALEEMF+ ARSIM WLG+
Sbjct: 510 VYGVTYIGARDQIKRRLKERCAVEDDSELFAASCYAAKTTLTALEEMFEAARSIMGWLGD 569
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAKVIA NQ VRW TPLGLPVVQPYR++GRH+IKTSLQ+LTLQRETDKVMVKRQRTAFP
Sbjct: 570 CAKVIACTNQAVRWVTPLGLPVVQPYREVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 629
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLDGSHMMMTAVACKQAG+ FAGVHDSYWTHACDV++MNRILR KFVELYETPIL
Sbjct: 630 PNFVHSLDGSHMMMTAVACKQAGMNFAGVHDSYWTHACDVEEMNRILREKFVELYETPIL 689
Query: 707 ENLLEGFQK 715
ENLLE F+K
Sbjct: 690 ENLLENFEK 698
>M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra023533 PE=3 SV=1
Length = 975
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/691 (71%), Positives = 583/691 (84%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
++RI FL+ E+ ++E +KLRKKV DL+KKQK++AVR I++
Sbjct: 256 EIRICTFLDKTRKKEEDDNEESGEVENGNPMREQDKLRKKVNDLIKKQKLSAVRKILQSH 315
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ TKPW R KVGS L+ELL++TAYIQ P++Q + PD+RPAF H+F+TV + + K+
Sbjct: 316 DYTKPWSADARAKVGSHLIELLVRTAYIQSPTNQQDNDLPDVRPAFKHTFKTVAQGSMKS 375
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
GRK+G+IECDPL+ KGL+++ + V+PYMPMLVPP+NW+GYDKG +LFL SY+M+THG K
Sbjct: 376 GRKYGVIECDPLVRKGLEKTGRYAVMPYMPMLVPPLNWSGYDKGAYLFLASYIMKTHGAK 435
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+K APK QL+PVFEALDTLG T+WRVNK+VL+VVDRIW+SGG ADLVDR DVPL
Sbjct: 436 QQREAIKSAPKGQLKPVFEALDTLGSTRWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPL 495
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE+ + EN ER+S RCDIELKL+VARKMKDEE FYYPHNVDF
Sbjct: 496 PEKPDTEDESILKKWKWEMKSAKKENSERHSLRCDIELKLSVARKMKDEEGFYYPHNVDF 555
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPM PHLNHLGSD+CRG+LEFA+GRPLG G +WLKIHLANLYAGGVDKLS EGR+
Sbjct: 556 RGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGSPGLRWLKIHLANLYAGGVDKLSYEGRL 615
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTESH+DDIFDSAD+PLEG RWWL AEDPFQCLAVCI LTEALRS SPET +SHIP+HQ
Sbjct: 616 AFTESHLDDIFDSADRPLEGNRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQ 675
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD +GA AVNLVAGEKPADVYS IA RVLDIMR DA KDP I+PDA
Sbjct: 676 DGSCNGLQHYAALGRDTIGAEAVNLVAGEKPADVYSEIATRVLDIMRRDADKDPEIYPDA 735
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER FSDD ++FGA+CYAAK
Sbjct: 736 LRARKLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSAFSDDKEIFGAACYAAK 795
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTL A++EMF+ AR+IM+W GECAK+IASEN+ VRWTTPLGLPVVQPY ++G ++KTSL
Sbjct: 796 VTLAAMDEMFEAARAIMHWFGECAKIIASENETVRWTTPLGLPVVQPYLQMGTKLVKTSL 855
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q L+LQRETDKV+V+RQRTAFPPNF+HSLDGSHMMMTAVACK+ G+ FAGVHDS+WTHAC
Sbjct: 856 QTLSLQRETDKVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRVGVCFAGVHDSFWTHAC 915
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD +N+ILR KFVELY PILENLLE F+K
Sbjct: 916 DVDKLNKILREKFVELYSQPILENLLESFEK 946
>R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10003497mg PE=4 SV=1
Length = 1014
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/691 (71%), Positives = 583/691 (84%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
++RI FL+ E+ T +KE +KLRK V +L+KKQK++AVR I++
Sbjct: 295 EIRICTFLDKTRKKKGDDNEESGEVENGTAMKEQDKLRKMVNELIKKQKLSAVRKILQSH 354
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ TKPW +R KVGSRL+ELL++TAYIQ P++Q + PD+RPAFVH+F+TV K + K+
Sbjct: 355 DYTKPWIADVRAKVGSRLIELLVRTAYIQSPANQQDNDMPDVRPAFVHTFKTVAKGSMKS 414
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
GRK+G+IECDPL+ KGL++S + V+PYMPMLVPP+ W+GYDKG +LFL SY+M+THG K
Sbjct: 415 GRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGAK 474
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVK APK QL+PVFEALDTLG TKWRVNK+VL+VVDRIW+SGG +ADLVDR DVPL
Sbjct: 475 QQREAVKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADLVDRSDVPL 534
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE + N ER+SQRCD ELKL+VARKMKDEE FYYPHN+DF
Sbjct: 535 PEKPDTEDENILKKWRWEAKSAKKVNSERHSQRCDTELKLSVARKMKDEEGFYYPHNIDF 594
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPM PHLNHLGSD+CRG+LEFA+GRPLG G +WLKIHLANLYAGGVDKLSLEGR+
Sbjct: 595 RGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGIPGLRWLKIHLANLYAGGVDKLSLEGRL 654
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG RWWL AEDPFQCLAVCI LTEALRS SPET +SHIP+HQ
Sbjct: 655 AFTENHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQ 714
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD LGA AVNLVAGEKPADVYSGIA RVLDIMR DA + P FPDA
Sbjct: 715 DGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRGPEAFPDA 774
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER F D+ ++FGA+CYAAK
Sbjct: 775 LRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAK 834
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTL A++EMFQ AR+IM W GECAK+IASEN+ VRWTTPLGLPVVQPY ++G ++KTSL
Sbjct: 835 VTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSL 894
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q L+LQRETDKV+V+RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHAC
Sbjct: 895 QTLSLQRETDKVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHAC 954
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD +NRILR KFVELY PILENLLE F++
Sbjct: 955 DVDKLNRILREKFVELYSQPILENLLESFEQ 985
>E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm1
PE=3 SV=1
Length = 996
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/691 (73%), Positives = 576/691 (83%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ RIH+FLE E+ T KE E LRKKV L+KKQK+ V I+K +
Sbjct: 282 EARIHRFLEKTKKKPANANKAEAEPEAVT--KEKEFLRKKVTSLIKKQKLRQVTKIVKGK 339
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D++PWG KVG RL+ELLM+ I P DQ DG AF HS R+ + +
Sbjct: 340 DDSEPWGTEGHAKVGCRLIELLMKP-LISAPLDQTADGHL-YSSAFRHSLRSPSNHQQNN 397
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+IECDPL+ KGLDR+A++MVIPYMPMLVPP+ WTGYDKG HLFLPSYVMRTHG +
Sbjct: 398 SRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLGWTGYDKGAHLFLPSYVMRTHGAR 457
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVK AP+KQL+ VFEALDTLG TKWRVNK+VL+VVDRIWASGG LA LVD DVPL
Sbjct: 458 QQREAVKSAPRKQLQSVFEALDTLGSTKWRVNKRVLAVVDRIWASGGHLAGLVDCQDVPL 517
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA + EN ERYSQRCD+ELKLAVARKMKDEE FYYPHN+DF
Sbjct: 518 PEKPDTEDEAVLRKWKWSLRNARKENSERYSQRCDVELKLAVARKMKDEEGFYYPHNLDF 577
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG WLKIH+ANLYAGG+DKLS +GR+
Sbjct: 578 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHVANLYAGGIDKLSYDGRL 637
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F E+H+DDIFDS+D+PLEG RWWL AEDPFQCLA CI L++ALRSSSPET ISH+P+HQ
Sbjct: 638 AFVENHLDDIFDSSDRPLEGSRWWLGAEDPFQCLAACINLSDALRSSSPETTISHVPIHQ 697
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV DIMR D+QKDP P A
Sbjct: 698 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAERVFDIMRRDSQKDPTNNPSA 757
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKERD DD ++FGA+CYAAK
Sbjct: 758 ARARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIPDD-QVFGAACYAAK 816
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TLTALEEMFQ AR+IM+WLG+CAKVIASEN+PVRWTTPLGLPVVQPY+K GR ++KTSL
Sbjct: 817 TTLTALEEMFQAARAIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYKKKGRCLVKTSL 876
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+L L+RETDKVM+KRQRTAFPPNFVHSLDGSHMMMTAVACK+AGL FAGVHDSYWTHAC
Sbjct: 877 QVLALKRETDKVMIKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLKFAGVHDSYWTHAC 936
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD++NRILR KFVELYE PILENLLEGFQK
Sbjct: 937 DVDEINRILREKFVELYEQPILENLLEGFQK 967
>E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm2
PE=3 SV=1
Length = 990
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/691 (72%), Positives = 579/691 (83%), Gaps = 9/691 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ RIH FLE E E+ T KE E LRKKV +L+KKQK+ V ++K +
Sbjct: 280 ESRIHSFLEKTKKKHARGNMAEEEPETVT--KEKEFLRKKVTNLIKKQKLRQVTKLVKGK 337
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D+ PWG KVG L+ELL++TAYIQPP DQ VDG PDIRPAF HS R V+KE
Sbjct: 338 DDSAPWGVEAHAKVGCHLIELLIETAYIQPPLDQTVDGPPDIRPAFRHSLRNVSKEQSSN 397
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+IECDPL+ KGLD++A++ VIPYMPMLVPP+ WTGYDKG HLFLPSY+MRTHG +
Sbjct: 398 SRRYGVIECDPLVRKGLDKTARHTVIPYMPMLVPPLCWTGYDKGAHLFLPSYIMRTHGSR 457
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREAVKR P +QL+ +FEALDTLG TKWR+NK++L+VV+RIWASGG LA LVD +D PL
Sbjct: 458 QQREAVKRTPTQQLQSIFEALDTLGSTKWRINKRLLAVVERIWASGGNLAGLVDCEDAPL 517
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA + EN E++SQRCD+ELKL+VARKMK+EE FYYPHN+DF
Sbjct: 518 PEKPDTEDEAVLRKWKWSLRNTKKENSEKHSQRCDVELKLSVARKMKEEEGFYYPHNLDF 577
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 578 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRL 637
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F E+H+DDIFDSADKPLEG RWWL AEDPFQCLA CI L+EALRSSSP+T ISH+PVHQ
Sbjct: 638 AFVENHLDDIFDSADKPLEGSRWWLGAEDPFQCLAACINLSEALRSSSPDTTISHVPVHQ 697
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIA+ VL+IMR D+QKDPA P A
Sbjct: 698 DGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIASGVLEIMRRDSQKDPANNPSA 757
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
+ AR L++QVDRKLVKQTVMTSVYGVTYIGAR+QIK+RLKERDV +D ++FGA+CYAAK
Sbjct: 758 VRARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDVIPED-QVFGAACYAAK 816
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TL ALEEMFQ AR IM+WLG+CAKVIASEN+ VRWTTPLGLPVVQPY+K GR ++
Sbjct: 817 TTLAALEEMFQAARGIMSWLGDCAKVIASENESVRWTTPLGLPVVQPYKKQGRCLV---- 872
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
L LQ+ETDKVM+KRQRTAFPPNFVHSLDGSHMMMTA+ACK+ GL FAGVHDSYWTHAC
Sbjct: 873 --LALQKETDKVMIKRQRTAFPPNFVHSLDGSHMMMTAIACKKIGLNFAGVHDSYWTHAC 930
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD+MNRILR KFVELYE PILENLLE +QK
Sbjct: 931 DVDEMNRILRKKFVELYEQPILENLLESYQK 961
>F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=AT5G15700 PE=2 SV=1
Length = 1051
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/666 (73%), Positives = 578/666 (86%), Gaps = 1/666 (0%)
Query: 50 ESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQT 109
E+ T +KE +KLRKKV +L+KKQK++AVR I++ + TKPW +R KVGSRL+ELL++T
Sbjct: 318 ENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRT 377
Query: 110 AYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMV 169
AYIQ P+DQ + PD+RPAFVH+F+ V K + +GRK+G+IECDPL+ KGL++S + V
Sbjct: 378 AYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 436
Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
+PYMPMLVPP+ W+GYDKG +LFL SY+M+THG KQQREA+K APK QL+PVFEALDTLG
Sbjct: 437 MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 496
Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
TKWRVNK+VL+VVDRIW+SGG +AD+VDR DVPLPE+PDT+DE +
Sbjct: 497 STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 556
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
N ER+SQRCD ELKL+VARKMKDEEAFYYPHN+DFRGRAYPM PHLNHLGSD+CRG+LEF
Sbjct: 557 NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 616
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
A+GRP+G SG +WLKIHLANLYAGGVDKLSL+GR++FTE+H+DDIFDSAD+PLEG RWWL
Sbjct: 617 AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 676
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
AEDPFQCLAVCI+LTEALRS SPET +SHIP+HQDGSCNGLQHYAALGRD LGA AVNL
Sbjct: 677 QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 736
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
VAGEKPADVYSGIA RVLDIMR DA +DP +FP+AL AR L+NQVDRKLVKQTVMTSVYG
Sbjct: 737 VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 796
Query: 530 VTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
VTYIGAR+QIKRRLKER F D+ ++FGA+CYAAKVTL A++EMFQ AR+IM W GECAK
Sbjct: 797 VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 856
Query: 590 VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNF 649
+IASEN+ VRWTTPLGLPVVQPY ++G ++KTSLQ L+LQ ETD+V+V+RQRTAFPPNF
Sbjct: 857 IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 916
Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD +N ILR KFVELY PILENL
Sbjct: 917 IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 976
Query: 710 LEGFQK 715
LE F++
Sbjct: 977 LESFEQ 982
>Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0069P02.30-1 PE=2 SV=1
Length = 951
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/651 (75%), Positives = 566/651 (86%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE E G + KE E+LRKKV DLMKKQKI VR I+K Q
Sbjct: 298 EVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQ 357
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+++KPWG KVGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV +E +K+
Sbjct: 358 DNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKS 417
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP++WTGYDKG HLFLPSYVMRTHG +
Sbjct: 418 SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGAR 477
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+AV+RAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 478 QQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVAL 537
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE ++ EN ER+SQRCD+ELKLAVARKMKDE+ FYYPHN+DF
Sbjct: 538 PEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDF 597
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR+
Sbjct: 598 RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 657
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQ
Sbjct: 658 AFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQ 717
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV++IM++DA KDPA PDA
Sbjct: 718 DGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDA 777
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAK
Sbjct: 778 ARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAK 837
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSL
Sbjct: 838 VTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSL 897
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGV 675
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FA V
Sbjct: 898 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAVV 948
>D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_909544 PE=3 SV=1
Length = 1009
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/691 (71%), Positives = 579/691 (83%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
++RI FL+ E+ T +KE +KLRKKV +L+KKQK++AVR I++
Sbjct: 295 EIRICTFLDKTRKKKGDENEESGEVENGTSMKEQDKLRKKVNELIKKQKLSAVRKILQSH 354
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ TKPW +R KVGSRL+ELL++TAYIQ P+DQ + PD+RPAFVH+FR +
Sbjct: 355 DYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFRIAN-----S 409
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
GRK+G+IECDPL+ KGL++S + VIPYMPMLVPP+ W+GYDKG +LFL SY+M+THG K
Sbjct: 410 GRKYGVIECDPLVRKGLEKSGRYAVIPYMPMLVPPLKWSGYDKGAYLFLASYIMKTHGSK 469
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+K APK QL PVFEALDTLG TKWRVNK+VL+VVDRIW+SGG ADLVDR DVPL
Sbjct: 470 QQREALKSAPKGQLLPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPL 529
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE + N ER+SQRCD ELKL+VARKMKDEEAFYYPHN+DF
Sbjct: 530 PEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDF 589
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPM PHLNHLGSD+CRG+LEFA+GRPLG SG +WLKIHLANLYAGGVDKLSL+GR+
Sbjct: 590 RGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGISGLRWLKIHLANLYAGGVDKLSLDGRL 649
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSAD+PLEG RWWL AEDPFQCLAVCI LTEALRS SPET +SHIP+HQ
Sbjct: 650 AFTENHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHIPIHQ 709
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD LGA AVNLVAGEKPADVYSGIA RVLDIMR DA +DP +PDA
Sbjct: 710 DGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEAYPDA 769
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER F D+ ++FGA+CYAAK
Sbjct: 770 LRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAACYAAK 829
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTL A++EMFQ AR+IM W G+CAK+IASEN+ VRWTTPLGLPVVQPY ++G ++KTSL
Sbjct: 830 VTLAAIDEMFQAARAIMRWFGDCAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSL 889
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q L+LQ ETD+V+V+RQRTAFPPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHAC
Sbjct: 890 QTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHAC 949
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD +NRILR KFVELY PILENLLE F++
Sbjct: 950 DVDKLNRILREKFVELYSQPILENLLESFEQ 980
>F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=MGP3 PE=2 SV=1
Length = 983
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/701 (68%), Positives = 574/701 (81%), Gaps = 10/701 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATE---IKEDEKLRKKVIDLMKKQKIAAVRGIM 81
+VRI+ FL+ E+ +E KE EK RK+V LM+K K+ V+ ++
Sbjct: 254 EVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALV 313
Query: 82 KDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA 141
+ + KPWG + KVG+RL++LLM+ AYIQPP++Q DG PDIRPAF +FRTVT E
Sbjct: 314 RKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLEN 373
Query: 142 KKTGRKFGIIECDPLILKGLDRS-------AKNMVIPYMPMLVPPVNWTGYDKGGHLFLP 194
KT R++G IECDPL+LKGLD+S A++MVIPY+PML+PP NWTGYD+G H FLP
Sbjct: 374 TKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAHFFLP 433
Query: 195 SYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLA 254
SYVMRTHG KQQR +KR PK+QLEPV+EALDTLG+TKW++NKKVLS+VDRIWA+GGR+
Sbjct: 434 SYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIG 493
Query: 255 DLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEE 314
LVDR+DVP+PEEP+ +D+ + +N ER+SQRCDIELKL VARKMKDEE
Sbjct: 494 GLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEE 553
Query: 315 AFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGG 374
FYYPHNVDFRGRAYP+HP+LNHLGSD+CRGILEF +G+PLGKSG +WLKIH+ANLYAGG
Sbjct: 554 GFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGG 613
Query: 375 VDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPE 434
VDKL+ E R++FTESH++DIFDS+D+PLEG+RWWLNAEDPFQCLA CI L+EALRS PE
Sbjct: 614 VDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPE 673
Query: 435 TFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDA 494
ISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV GEKPADVY+ IAARVL IM+ DA
Sbjct: 674 AAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDA 733
Query: 495 QKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTK 554
++DP FP+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER F DD+
Sbjct: 734 EEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSL 793
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRK 614
F ASCYAAK+TL ALEEMF+ AR+I +W G+CAK+IASEN V WTTPLGLPVVQPYRK
Sbjct: 794 TFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRK 853
Query: 615 LGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAG 674
GRH++KT+LQ+LTL RETDKVM +RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAG
Sbjct: 854 PGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAG 913
Query: 675 VHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
VHDS+WTHACDVD MN ILR KFVELYE PILENLLE FQK
Sbjct: 914 VHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQK 954
>Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cleome spinosa PE=4
SV=1
Length = 1021
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/691 (70%), Positives = 570/691 (82%), Gaps = 34/691 (4%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
++RI +FLE E E T +KE++ L++KV +L+KKQK+ AVR I+
Sbjct: 310 EIRICRFLEKTKKKKENISEGVENVEKETTVKEEDWLKRKVSELIKKQKLPAVRQILNSH 369
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ +KPW +R KVGSRL+EL M+TAYIQPP++Q D PDIRPAFVH+F+TV K +KK+
Sbjct: 370 DASKPWSTDVRAKVGSRLIELFMKTAYIQPPTNQRGDDPPDIRPAFVHTFKTV-KNSKKS 428
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
GR++G+IECDPL+ KGL+++ +MV+PYMPMLVPPVNW+GYD+G + FLPSY+MR HG K
Sbjct: 429 GRRYGVIECDPLVRKGLEKTGWHMVMPYMPMLVPPVNWSGYDRGAYFFLPSYLMRIHGAK 488
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQREA+K P+KQL+ VFEALDTLG+ KWRVNK+VLS+VDRIW SGGRLADLVDR DVPL
Sbjct: 489 QQREALKSTPRKQLQLVFEALDTLGNAKWRVNKRVLSIVDRIWNSGGRLADLVDRSDVPL 548
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DE + ENRER+SQRCDIELKL VARKMKDEE FYYPHN+DF
Sbjct: 549 PEKPDTEDENILKKWKWKVKSANKENRERHSQRCDIELKLNVARKMKDEEGFYYPHNIDF 608
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHPHLNHLGSD+CRG+LEFA+G+PLG SG +WLKIHLANLYAGGVDKLS EGR+
Sbjct: 609 RGRAYPMHPHLNHLGSDLCRGVLEFAEGKPLGSSGLRWLKIHLANLYAGGVDKLSFEGRL 668
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H+DDIF+SAD+PLEGRRWWL AEDPFQCLAVCI +TEALRS PETF+SHIP+HQ
Sbjct: 669 AFTENHLDDIFNSADRPLEGRRWWLQAEDPFQCLAVCINITEALRSPCPETFVSHIPIHQ 728
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
LGAAAVNLVAGEKPADVYSGIAARVLDIMR DA++DP +FPDA
Sbjct: 729 -----------------LGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEQDPEVFPDA 771
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR LVNQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER +F+DDT+LFGA+CYAAK
Sbjct: 772 LRARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSIFTDDTELFGAACYAAK 831
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMFQ AR IM+WLGECAK+IAS+NQPVRWTTPLGLPVVQPYRK+GRH
Sbjct: 832 VTLTALGEMFQAARDIMSWLGECAKIIASQNQPVRWTTPLGLPVVQPYRKMGRHT----- 886
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
VMVKRQRTAFPPNFVHSLDGSHMMMTAVAC++AG+ FAGVHDSYWTHAC
Sbjct: 887 -----------VMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGICFAGVHDSYWTHAC 935
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD++NR LR KFVELY+ PILE+LLE F+K
Sbjct: 936 DVDELNRTLREKFVELYDKPILEDLLESFEK 966
>M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004354 PE=3 SV=1
Length = 971
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/693 (68%), Positives = 577/693 (83%), Gaps = 2/693 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI--KEDEKLRKKVIDLMKKQKIAAVRGIMK 82
+ RI+ F++ E +++ EI KE KL+K++ L+KK K+ VRGI+K
Sbjct: 250 EARINSFMKKAKKKKNVVDDESEGVDASGEIDTKETLKLKKQINTLLKKHKVRQVRGIVK 309
Query: 83 DQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
+ K WG + KVG+RL++LLM+TAYIQPP++Q DG P+IRPAF S RTVT E K
Sbjct: 310 AHDSFKSWGQEAQVKVGARLIQLLMETAYIQPPAEQFDDGPPEIRPAFKQSSRTVTIENK 369
Query: 143 KTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
K RK+G IECDPLI KGLD+SA++MVIPY+PML+PP NWTGYD+G H FLPSY+MRTHG
Sbjct: 370 KLSRKYGCIECDPLIRKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYIMRTHG 429
Query: 203 VKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
KQQR A+KR PK QLEPVF+ALDTLG+TKWR+NKKVLS+VDRIWA+GGR+ LVDRDD
Sbjct: 430 AKQQRVAIKRTPKAQLEPVFQALDTLGNTKWRINKKVLSLVDRIWANGGRVGGLVDRDDA 489
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
P+PEEPD++D+ +I EN ER+SQRCD+ELKL VARKMKDEE FY+PHNV
Sbjct: 490 PIPEEPDSEDQEEIKQWKWKMKEANKENSERHSQRCDVELKLEVARKMKDEEGFYFPHNV 549
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYPMHP+LNHLGSD+CRGILEF +G+PLG+SG +WLKIH+ANLY GGVDK + +
Sbjct: 550 DFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKIHIANLYGGGVDKFAYKD 609
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
RV+FTESH++DIFDS+D+PLEG+RW LNAEDPFQCLA C+ L+EALRS PE ISHIP+
Sbjct: 610 RVAFTESHLEDIFDSSDRPLEGKRWRLNAEDPFQCLAACMNLSEALRSPFPEAAISHIPI 669
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDGSCNGLQHYAALGRD++GAAAVNL GEKPADVY+ IAARVL+IMR DA++DP FP
Sbjct: 670 HQDGSCNGLQHYAALGRDQIGAAAVNLFTGEKPADVYADIAARVLNIMRQDAEEDPETFP 729
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYA 562
+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER F+DD++ F ASCYA
Sbjct: 730 NATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAFADDSQNFHASCYA 789
Query: 563 AKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKT 622
A+VTL ALEEMF+ AR+IM+W GECAK+IAS+N+ V WTTPLGLPVVQPYRK RH++KT
Sbjct: 790 ARVTLKALEEMFEAARAIMSWFGECAKIIASQNKAVCWTTPLGLPVVQPYRKNERHLVKT 849
Query: 623 SLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
+LQ+LTLQRET+KVM ++Q TAF PNFVHSLDGSHMMMTAVAC +AGL+FAGVHDS+WTH
Sbjct: 850 TLQVLTLQRETEKVMARKQMTAFAPNFVHSLDGSHMMMTAVACNKAGLSFAGVHDSFWTH 909
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
ACDV+ MN ILR KFVELY+ PILENLLE FQK
Sbjct: 910 ACDVELMNNILREKFVELYDKPILENLLESFQK 942
>D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476028 PE=3 SV=1
Length = 975
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/694 (68%), Positives = 568/694 (81%), Gaps = 3/694 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATE---IKEDEKLRKKVIDLMKKQKIAAVRGIM 81
+VRI+ FL+ +E KE EK RK+ LM+K K+ V+ ++
Sbjct: 253 EVRINSFLQKNNKKNATGKTINTEAVHVSEETVAKETEKARKRATVLMEKNKLREVKVLV 312
Query: 82 KDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA 141
+ + KPWG + KVG+RL++LL++ AYIQPP++Q DG PDIRPAF +FRTVT E
Sbjct: 313 RKHDSFKPWGQEAQVKVGARLIQLLIENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLEN 372
Query: 142 KKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTH 201
KT R++G IECDPL+LKGLD+SA++MVIPY+PML+PP NWTGYD+G HLFLPS++MRTH
Sbjct: 373 TKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHLFLPSFIMRTH 432
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
G QQR ++R PK+QLEPVFEALDTLG+TKWR+NKKVLS+VDRIWA+GGRL LVDR+D
Sbjct: 433 GAIQQRTVMRRTPKEQLEPVFEALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDRED 492
Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
VP+PEEP+ +D + +N ER+SQRCDIELKL VARKMKDEE FYYPHN
Sbjct: 493 VPVPEEPEREDHEKFKNWKWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHN 552
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
VDFRGRAYP+HP+LNHLGSD+CRGILEF +G+PLGKSG +WLKIH+ANLYAGGVDKL+ E
Sbjct: 553 VDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYE 612
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R++FTESH++DI+DS+D+PLEG+RWWLNAEDPFQCLA CI L+EALRS PE ISHIP
Sbjct: 613 DRIAFTESHLEDIYDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIP 672
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
+HQDGSCNGLQHYAALGRDKLGA AVNLV GEKPADVY+ IAARV IM+ DA++DP F
Sbjct: 673 IHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVFKIMQQDAKEDPETF 732
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCY 561
P+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER F DD+ F A+CY
Sbjct: 733 PNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHAACY 792
Query: 562 AAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIK 621
AAK+TL ALEEMF+ AR+I +W G+CAK+IASEN+ V WTTPLGLPVVQPYRK GRH++K
Sbjct: 793 AAKITLKALEEMFEAARAIKSWFGDCAKIIASENKAVCWTTPLGLPVVQPYRKPGRHLVK 852
Query: 622 TSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWT 681
T+LQ+LTL RETDKV +RQ TAF PNF+HSLDGSHMMMTAVAC + GL+FAGVHDS+WT
Sbjct: 853 TTLQVLTLSRETDKVAARRQMTAFAPNFIHSLDGSHMMMTAVACNRVGLSFAGVHDSFWT 912
Query: 682 HACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
HACDV+ MN ILR KFVELYE PILENLLE FQK
Sbjct: 913 HACDVEIMNTILREKFVELYEKPILENLLESFQK 946
>R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10019728mg PE=4 SV=1
Length = 971
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/666 (70%), Positives = 560/666 (84%)
Query: 50 ESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQT 109
+S KE E++RK+V LMKK+K+ V+ ++K + KPWG + KVGSRL++LLM+
Sbjct: 277 DSEAVAKETERMRKQVGVLMKKKKLREVKALVKKHDSFKPWGQEAQVKVGSRLIQLLMEN 336
Query: 110 AYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMV 169
AYIQPP++Q DG PDIRPAF +FRTVT E KT R++G IECD L+ KGLD+SA++MV
Sbjct: 337 AYIQPPAEQFDDGPPDIRPAFKQTFRTVTLENTKTSRRYGCIECDSLVQKGLDKSARHMV 396
Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
IPY+PML+PP NWTGYD+G H FLPS++MRTHG KQQR +K+ PK+QL+PVFEALDTLG
Sbjct: 397 IPYLPMLIPPQNWTGYDQGAHFFLPSFIMRTHGAKQQRMVIKQTPKEQLKPVFEALDTLG 456
Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
+TKWR+NKKVLS+VDRIWA+GGRL LVDR+DVPLPEEP ++D+ + E
Sbjct: 457 NTKWRINKKVLSLVDRIWANGGRLGGLVDREDVPLPEEPVSEDQENVKDWKWELKKANKE 516
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
N ER+SQRCDIELKL VARKMKDEE FYYPHNVDFRGRAYPMHP+LNHLGSD+CRGILEF
Sbjct: 517 NNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEF 576
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
+G+PLGKSG +WLKIH+ANLYAGGVDKL+ E RV+FTESH++DIFD++D+PLEG+RWWL
Sbjct: 577 CEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRVAFTESHLEDIFDTSDRPLEGKRWWL 636
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
AEDPFQCLA CI+L+EALRS PE ISHIP+HQDGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 637 KAEDPFQCLAACISLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNL 696
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
V GEKPADVY+ IAARVL IM+ DA++DP F +A +A+ +++QVDRKLVKQTVMTSVYG
Sbjct: 697 VTGEKPADVYAEIAARVLKIMQQDAEEDPETFRNATYAKLMLDQVDRKLVKQTVMTSVYG 756
Query: 530 VTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
VTY GAR+QIK+RLKER F DD+ F A+CYAAK+TL ALEEMF+ AR+I W GECAK
Sbjct: 757 VTYSGARDQIKKRLKERGAFGDDSLTFHAACYAAKITLKALEEMFEAARAIKTWFGECAK 816
Query: 590 VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNF 649
+IA+EN+ V WTTPLGLPVVQPYR GRH++KT+LQ+LTL RETDKV +RQ TAF PNF
Sbjct: 817 IIAAENKAVCWTTPLGLPVVQPYRLPGRHLVKTTLQVLTLSRETDKVQTRRQMTAFAPNF 876
Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
+HSLDGSHMMMTAVAC AGL+FAGVHDS+WTHACDV+ MN ILR KFVELYE PILENL
Sbjct: 877 IHSLDGSHMMMTAVACNSAGLSFAGVHDSFWTHACDVEIMNTILREKFVELYEKPILENL 936
Query: 710 LEGFQK 715
LE FQK
Sbjct: 937 LESFQK 942
>E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTp
PE=3 SV=1
Length = 985
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/690 (69%), Positives = 575/690 (83%), Gaps = 3/690 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRI+ F + E E+ E K E LRK+V +L+KK+KI V+ ++ +
Sbjct: 269 EVRIYNFFQKIKKSTRENQILSENHEN--ESKNQEALRKRVTNLLKKKKIRDVQ-LLVEA 325
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+D +PWG K+GSR ++LL+QT Y+QPP +Q+ +G P+IRPAF H+F+T KE +
Sbjct: 326 DDVEPWGRDSHAKLGSRXIDLLIQTXYVQPPLNQLAZGPPEIRPAFRHTFKTXKKEXDNS 385
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
+++GIIECDPL+ KGLD +A+++VIPYMPML+PP WTGYDKGGHLFLPSYVMRTHG K
Sbjct: 386 VKRYGIIECDPLVRKGLDATARHLVIPYMPMLIPPKKWTGYDKGGHLFLPSYVMRTHGAK 445
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR+A+K PK QL+ VFEALDTLG TKWRVNK+VL V+D +WASG +A LVD D+ L
Sbjct: 446 QQRDALKSVPKXQLKEVFEALDTLGSTKWRVNKRVLDVIDSLWASGRPIAGLVDHSDIAL 505
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+P T+DEAQ+ EN ER++QRCDIELKL+VARKM+ E+ FYYPHN+DF
Sbjct: 506 PEKPCTEDEAQMRRWRWSVKKVKKENCERHAQRCDIELKLSVARKMRKEDGFYYPHNLDF 565
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHPHLNHLGSD+CRGILEFA+G+PLGK+G +WLKIHLANLY GGVDKLS +GR+
Sbjct: 566 RGRAYPMHPHLNHLGSDLCRGILEFAEGKPLGKTGLRWLKIHLANLYGGGVDKLSFDGRL 625
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+F E+H+ DIFDSA++P+EGR+WWLNAEDPFQCLA CI L+ AL+SSSPE ISHIPVH
Sbjct: 626 TFVENHLADIFDSAERPIEGRQWWLNAEDPFQCLAACIDLSXALKSSSPEDAISHIPVHL 685
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD+LGAA+VNLV+GEKP DVYSGIAARV++I+ D++KDPA+ P +
Sbjct: 686 DGSCNGLQHYAALGRDRLGAASVNLVSGEKPXDVYSGIAARVMEIVVRDSKKDPAVHPTS 745
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
L AR L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKERD +DD LF A+CYAAK
Sbjct: 746 LLARILIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDFITDDKLLFSAACYAAK 805
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTL+ALEEMFQ ARSIM+WLG+CAKVIASEN+PVRWTTPLGLPVVQPY K RH+++TSL
Sbjct: 806 VTLSALEEMFQAARSIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYWKQSRHLVRTSL 865
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+L LQRE++KV+VKRQ+TAFPPNFVHSLDGSHMMMTAVACK AGL FAGVHDSYWTHAC
Sbjct: 866 QVLALQRESNKVLVKRQKTAFPPNFVHSLDGSHMMMTAVACKLAGLNFAGVHDSYWTHAC 925
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVDDM+RILR KFVELY PILENLLE FQ
Sbjct: 926 DVDDMSRILRLKFVELYSMPILENLLESFQ 955
>F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_11s0037g00630 PE=3 SV=1
Length = 979
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/691 (68%), Positives = 563/691 (81%), Gaps = 6/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE G S ++E E LRK+V ++K+KI V+ ++K++
Sbjct: 264 EVRIHSFLEKTKNFERHKT----VGHSQEGLREKEILRKRVKSFIRKKKIIEVQKLVKNE 319
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA-KK 143
T PWG + K+GSRL+ELL +TAY+Q P +Q D PD+RPAF H+F+TVTKE+ +K
Sbjct: 320 EIT-PWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQK 378
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
RK+G+IECDPL+L GLDR+AK+MVIPY+PML+PP W GYDKGG+LFLPSYVMRTHG
Sbjct: 379 DWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGS 438
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
++Q++AVK P++QL+ VFEALDTLG+TKWR+N++VLSVV+ IWA GG L LVDR++VP
Sbjct: 439 RKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVP 498
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+P T+D +I N+ER+S RCD E+KL+VARKMKDEE FYYPHN+D
Sbjct: 499 LPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLD 558
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHPHLNHL SD+CRG+LEFA+GRPLGKSG +WLKI LANLYAGGV+KLS +GR
Sbjct: 559 FRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGR 618
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F ++H+DD+FDSAD PL G RWWL AEDPFQCLA CI L+EALRSSSP T ISH+P+H
Sbjct: 619 LAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIH 678
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGR+ L A+AVNLVAGEKPADVYS IAARV +IM+ D+ KDPA P
Sbjct: 679 QDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPK 738
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ L+ QVDRKLVKQTVMTSVYGVTYIGAREQIKRRL E+ + +D+ LF A+CYAA
Sbjct: 739 ALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAA 798
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTL AL E+FQ AR IM WLGECAKVIASENQPV+WTTPLGLPV+QPY K RH+I+TS
Sbjct: 799 KVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTS 858
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+L LQRE V++++QRTAFPPNFVHSLDGSHMMMTAVAC+ AGL FAGVHDS+WTHA
Sbjct: 859 LQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHA 918
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
CDVD MN+ILR KFVELY PILENLLE FQ
Sbjct: 919 CDVDKMNQILREKFVELYSMPILENLLESFQ 949
>B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica oleracea var.
alboglabra GN=BoB028L01.020 PE=3 SV=1
Length = 951
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/693 (66%), Positives = 558/693 (80%), Gaps = 18/693 (2%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI--KEDEKLRKKVIDLMKKQKIAAVRGIMK 82
+ RI F++ EA ++ E+ KE KL+K++ L+KK K+ VR I+K
Sbjct: 246 EARITSFMKKAKKKKNVVDDESEAVNASGEVETKETLKLKKQINTLLKKHKVRQVREIVK 305
Query: 83 DQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
+ K WG + KVG+RL++LLM+TAYIQPP++Q DG P+IRPAF S R VT E K
Sbjct: 306 AHDSFKSWGQEAQVKVGARLIQLLMETAYIQPPAEQFDDGPPEIRPAFKQSSRIVTIENK 365
Query: 143 KTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
K RK+G IECDPLI KGLD+SA++MVIPY+PML+PP NWTGYD+G H FLPSY+MRTHG
Sbjct: 366 KLSRKYGCIECDPLIRKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYIMRTHG 425
Query: 203 VKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
KQQR A+KR PK QLEPVF+ L+TLG+TKWR+NKKVLS+VDRIWA+GGR+ LVDRDDV
Sbjct: 426 AKQQRIAIKRTPKAQLEPVFQGLNTLGNTKWRINKKVLSLVDRIWANGGRVGGLVDRDDV 485
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
P+PEEPD++D+ +I EN ER+SQRCD+ELKL VARKMKDEE FY+PHNV
Sbjct: 486 PIPEEPDSEDQEEIKQWKWKMKEANKENSERHSQRCDVELKLEVARKMKDEEGFYFPHNV 545
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYPMHP+LNHLGSD+CRGILEF +G+PLG+SG +WLKIH+ANLY GGVDK + +
Sbjct: 546 DFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKIHIANLYGGGVDKFAYKD 605
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
RV+F ESH++DIFDS+D+PLEG+RWWLNAEDPFQCLA C+ L+EALRS PE +SHIP+
Sbjct: 606 RVAFAESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACMNLSEALRSPFPEAAVSHIPI 665
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDGSCNGLQHYAALGRD++GAAAVNL GEKPADVY+ IAARVL+IMR DA++DP FP
Sbjct: 666 HQDGSCNGLQHYAALGRDQIGAAAVNLFTGEKPADVYADIAARVLNIMRQDAEEDPETFP 725
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYA 562
+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER F+DD++ F ASCYA
Sbjct: 726 NATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAFADDSQNFHASCYA 785
Query: 563 AKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKT 622
A+VTL ALEEMF+ AR+IM+W GECAK+IAS+N+ V WTTPLGLPVVQPYRK RH+
Sbjct: 786 ARVTLKALEEMFEAARAIMSWFGECAKIIASQNKAVCWTTPLGLPVVQPYRKNERHL--- 842
Query: 623 SLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
VM ++Q TAF PNFVHSLDGSHMMMTAVAC +AGL+FAGVHDS+WTH
Sbjct: 843 -------------VMARKQMTAFAPNFVHSLDGSHMMMTAVACNKAGLSFAGVHDSFWTH 889
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
ACDV+ MN ILR KFVELY+ PILENLLE FQK
Sbjct: 890 ACDVELMNNILREKFVELYDKPILENLLESFQK 922
>B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_911981 PE=3 SV=1
Length = 882
Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/691 (67%), Positives = 556/691 (80%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE E E+ KE E LRK+V L++++++ V+ ++K Q
Sbjct: 166 EVRIHNFLEKTKNYQRKKTMH-EVQETMD--KEKEVLRKRVNSLIRRKRLMEVQNLVK-Q 221
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKE-AKK 143
++TKPW + K+GSRL+ELL +TAY+QPP +Q D PD+RPAF H F+T+TK +K
Sbjct: 222 DETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQK 281
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+K+G+IECDPLIL GLD +AK+M+IPY PMLVPP W GYDKGGHLFLPSYVMRTHG
Sbjct: 282 IVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGS 341
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQ+ AV+ P KQ++ VFEALDTLG+TKWRVN+++L VV+RIW SGG +A LVDR+D+P
Sbjct: 342 RQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIP 401
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
+PE+P +DD +I N+ER+SQRCD ELKL+VARK+KDEE FYYPHN+D
Sbjct: 402 IPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 461
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHPHL HL SD+CRG+LEF +GRPLGKSG +WLKIHLANLY+GGV+KLS +GR
Sbjct: 462 FRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGR 521
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F E+H+ +IFDSA P+ G+RWWL AEDPFQCLA CI L+EAL S+SP T ISH+P+H
Sbjct: 522 LAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIH 581
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD L AAAVNLVA EKP+DVYS IA RV +I+R D+ KDPA P
Sbjct: 582 QDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPH 641
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ LV+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ +DD LF A+CY A
Sbjct: 642 ALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTA 701
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL E+FQ AR IM+WLG+CAK+IASE+QPV+WTTPLGLPVVQPY K RH+IKTS
Sbjct: 702 KVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTS 761
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+L LQRE V V++QRTAFPPNFVHSLDGSHMMMTAVAC+ AGL FAGVHDS+WTHA
Sbjct: 762 LQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHA 821
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
DVD MNRILR KFVELY PILENLLE FQ
Sbjct: 822 TDVDLMNRILREKFVELYNMPILENLLEDFQ 852
>A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_30516 PE=3 SV=1
Length = 845
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/625 (74%), Positives = 524/625 (83%), Gaps = 42/625 (6%)
Query: 91 GPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGI 150
G + +VGSRL+EL+++TAYIQPP+ Q DG PDIRPAF H RTV +E +
Sbjct: 234 GEAIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQ-------- 285
Query: 151 IECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAV 210
YDKG HLFLPSYVMRTHG +QQR+AV
Sbjct: 286 ----------------------------------YDKGAHLFLPSYVMRTHGARQQRDAV 311
Query: 211 KRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDT 270
+RAP++Q++ VFEAL+TLG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV LPE+PDT
Sbjct: 312 RRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDT 371
Query: 271 DDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYP 330
+DE ++ EN ER+SQRCD+ELKLAVARKMKDE+ FYYPHN+DFRGRAYP
Sbjct: 372 EDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYP 431
Query: 331 MHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESH 390
MHP+LNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGVDKLS +GR++FTE+H
Sbjct: 432 MHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENH 491
Query: 391 VDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNG 450
++DIFDSAD+PLEG+RWWL AEDPFQCLAVCI LTEALRS SPET ISHIPVHQDGSCNG
Sbjct: 492 LEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNG 551
Query: 451 LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTL 510
LQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV++IM++DA KDPA PDA AR L
Sbjct: 552 LQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLL 611
Query: 511 VNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTAL 570
++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKERD+ DD++LF ASCYAAKVTLTAL
Sbjct: 612 LDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTAL 671
Query: 571 EEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ 630
EMFQ ARSIMNWLG+CAKVIA EN+PVRWTTPLGLPVVQPYRKLGRH+IKTSLQ+LTLQ
Sbjct: 672 GEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 731
Query: 631 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMN 690
RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHACDVD MN
Sbjct: 732 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMN 791
Query: 691 RILRGKFVELYETPILENLLEGFQK 715
+ILR KFVELY+TPILENLLE F+K
Sbjct: 792 KILREKFVELYDTPILENLLESFEK 816
>M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000868mg PE=4 SV=1
Length = 976
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/692 (66%), Positives = 552/692 (79%), Gaps = 7/692 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXX-XXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKD 83
+VRIH FLE E G S KE E LRK+V L++++++ V+ ++
Sbjct: 260 EVRIHSFLEKTKNLQKKKTGVADEDGLS----KEKEILRKRVNGLIRRKRLNEVQKLLIK 315
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKE-AK 142
+ + KPWG + K+GSRL+ELL +TAY+QPP Q+ D PD+RPAF H F+ V K +
Sbjct: 316 E-EMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAVAKSPGQ 374
Query: 143 KTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
K + +G+IECDPL+L GLD++AK+M+IPY+PMLVPP W GYDKGGHLFLPSYVMRTHG
Sbjct: 375 KIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHG 434
Query: 203 VKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
++Q +A++ + Q++ VFEALD LG TKWRVNKKVLSVV+ IWA GG +A LV+R+DV
Sbjct: 435 SRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDV 494
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
P+P++ ++D +I N+ER+SQRCD ELKL+VARKMKDEE FYYPHN+
Sbjct: 495 PVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNL 554
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYPMHPHLNHL SD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGGV+KLS EG
Sbjct: 555 DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEG 614
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
R++F ++H+DDIFDSA P+ G RWWL AEDP QCLA CI L+EAL S SP T ISH+P+
Sbjct: 615 RLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPI 674
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDGSCNGLQHYAALGRD L AAAVNLV G+KPADVYS IAARV +IM+ D+ KDP P
Sbjct: 675 HQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSP 734
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYA 562
+AL AR LVNQ+DRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ + +DD LF A+CYA
Sbjct: 735 NALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYA 794
Query: 563 AKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKT 622
AKVTL AL E+FQ AR IM+WLG+CAKVIASENQPVRWTTPLGLPVVQPY K RH+I+T
Sbjct: 795 AKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRT 854
Query: 623 SLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
SLQ+L LQRE++ V +++QRTAFPPNFVHSLDGSHMMMTA+AC+ AGL FAGVHDS+WTH
Sbjct: 855 SLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTH 914
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
CDVD MN ILR KFVELY PILE+LLE FQ
Sbjct: 915 PCDVDQMNEILREKFVELYSMPILESLLESFQ 946
>M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra039230 PE=3 SV=1
Length = 979
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/703 (64%), Positives = 557/703 (79%), Gaps = 10/703 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+K+ + LRK+V L+++++
Sbjct: 257 AAVSIGIAIEHEVRIHNFLKRTRKN--------NAGDSQEELKDKQLLRKRVNSLIRRKR 308
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + KPWG + K+GSRL+ELLM+TAY+QPP Q D P+ RPAF H
Sbjct: 309 IIDALKVVKSEG-IKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEFRPAFRHK 367
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 368 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWRGYDKGGYLF 427
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A+K K VFEALDTLG+TKWRVN+K+L VV+R+WA GG
Sbjct: 428 LPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGN 487
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D ++ NRER+S RCD+ELKL+VARKMKD
Sbjct: 488 IAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKAKKTNRERHSLRCDVELKLSVARKMKD 547
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 548 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYA 607
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS EGR+SF E+H+DDI DSA+ + GRRWWL AEDPFQCLA C+ L +AL+S S
Sbjct: 608 GGVEKLSHEGRLSFVENHLDDIMDSAENAIHGRRWWLKAEDPFQCLAACVVLAQALKSPS 667
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 668 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKK 727
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+NQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 728 DSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 787
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IA++N PVRWTTPLGLPVVQPY
Sbjct: 788 RMLFSAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIATDNHPVRWTTPLGLPVVQPY 847
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ RH+I+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 848 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 907
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AGVHDSYWTHACDVD MNRILR KFVELY TPILE+LL+ FQ+
Sbjct: 908 AGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQE 950
>B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_802205 PE=2 SV=1
Length = 982
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/691 (66%), Positives = 552/691 (79%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE + ES KE E LRK+V L++++++ V+ ++ Q
Sbjct: 266 EVRIHNFLEKTKNHQRKKTMH-DVQESMD--KEKEMLRKRVNSLIRRKRLMEVQNLVI-Q 321
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKE-AKK 143
++TKPW + K+GSRL+ELL +TAY+QPP DQ PD+RPAF H F++VTK +K
Sbjct: 322 DETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPGQK 381
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
T +K+G+IECDPLIL GLD +AK+M+IPY PMLVPP W GYDKGGHLFLPSY+MRTHG
Sbjct: 382 TVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGS 441
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQ++AV+ P KQ++ VFEALDTLG+TKWRVN KVL VV+RIWASGG A LV+R D+P
Sbjct: 442 RQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIP 501
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
+PE+ +DD +I N+ER+SQRCD ELKL+VARK+KDEE FYYPHN+D
Sbjct: 502 IPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 561
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHPHL HL SD+CRG+LEFA+GRPLGKSG WLKIHLANLY+GGV+KLS +GR
Sbjct: 562 FRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGR 621
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F E+H+ +IFDSA+ P+ G+RWWL AEDPFQCLA CI L+EAL+S+SP T ISH+P+H
Sbjct: 622 LAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIH 681
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD AAAVNLVA EKP+DVYS IA RV +I+R D+ KDPA P
Sbjct: 682 QDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPH 741
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ L+++VDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ +DD LF A+CYAA
Sbjct: 742 ALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAA 801
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL E+FQ AR IM WLG+CAKVIASE+QPVRWTTPLGLPVVQPY K RH+I+TS
Sbjct: 802 KVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTS 861
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+L LQRE V V++QRTAFPPNFVHSLDGSHMMMTAVAC+ A L FAGVHDS+WTHA
Sbjct: 862 LQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHA 921
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
D D MNRILR KFVELY PILENLLE FQ
Sbjct: 922 RDADLMNRILREKFVELYNMPILENLLEDFQ 952
>R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025273mg PE=4 SV=1
Length = 991
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/703 (63%), Positives = 556/703 (79%), Gaps = 10/703 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+KE + LRK+V L+++++
Sbjct: 269 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 320
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + KPWG + K+GSRL+ELL++TAY+QPP Q D P+ RPAF H
Sbjct: 321 IIDALKVVKSEG-IKPWGRATQAKLGSRLLELLIETAYVQPPLTQSGDSIPEFRPAFRHK 379
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 380 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMIIPYVPMLVPPKRWKGYDKGGYLF 439
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A++ K VFEALDTLG+TKWRVN+K+L VV+R+WA GG
Sbjct: 440 LPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGN 499
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D ++ NRER+S RCD+ELKL+VARKMKD
Sbjct: 500 IAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKD 559
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 560 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 619
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS + R++F E+H+DD+ DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 620 GGVEKLSHDARLAFVETHLDDVMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 679
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 680 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 739
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 740 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 799
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 800 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 859
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ RH+I+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 860 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 919
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AGVHDSYWTHACDVD MNRILR KFVELY TPILE+LL+ FQ+
Sbjct: 920 AGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQE 962
>Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At2g24120 PE=2 SV=1
Length = 993
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/703 (63%), Positives = 555/703 (78%), Gaps = 10/703 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+KE + LRK+V L+++++
Sbjct: 271 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 322
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + TKPWG + K+GSRL+ELL++ AY+QPP Q D P+ RPAF H
Sbjct: 323 IIDALKVVKSEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 381
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 382 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 441
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A+K K VFEALDTLG+TKWRVN+ +L VV+R+WA GG
Sbjct: 442 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 501
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D ++ NRER+S RCD+ELKL+VARKMKD
Sbjct: 502 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 561
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 562 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 621
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 622 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 681
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 682 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 741
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 742 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 801
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 802 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 861
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ RH+I+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 862 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 921
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AGVHDSYWTHACDVD MNRILR KFVELY TPILE+LL+ FQ+
Sbjct: 922 AGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQE 964
>D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_481268 PE=3 SV=1
Length = 990
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/703 (63%), Positives = 555/703 (78%), Gaps = 10/703 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+KE + LRK+V L+++++
Sbjct: 268 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 319
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + TKPWG + K+GSRL+ELL++ AY+QPP Q D P+ RPAF H
Sbjct: 320 IIDALKVVKTEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHK 378
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 379 FKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 438
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A++ K VFEALDTLG+TKWRVN+ +L VV+R+WA GG
Sbjct: 439 LPSYIMRTHGSKKQQDALRDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 498
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D +I NRER+S RCD+ELKL+VARKMKD
Sbjct: 499 IAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKD 558
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANL+A
Sbjct: 559 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLFA 618
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+ALRS S
Sbjct: 619 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALRSPS 678
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 679 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 738
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 739 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 798
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 799 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 858
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ RH+I+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 859 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 918
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AGVHDSYWTHACDVD MNRILR KFVELY TPILE+LL+ FQ+
Sbjct: 919 AGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQE 961
>Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT3 PE=2 SV=1
Length = 989
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/702 (63%), Positives = 554/702 (78%), Gaps = 7/702 (0%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A L + +++IH FLE E +KE E R +V L+K+++
Sbjct: 264 AALQIGTAIEQEIKIHSFLEKTKNIRKNASDLPE-----DLLKEKEIQRNRVKSLIKRKR 318
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
+ ++ + D+K W + K+GSRL+ELL+ TAYIQ P+ Q D PD+RPAF H
Sbjct: 319 LFEAAKLVTSE-DSKSWSQDTQAKLGSRLIELLIDTAYIQHPTSQSADTPPDVRPAFRHK 377
Query: 134 FRTVTKE-AKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+ + E ++ +++G+IECDPL+LKG+DRSA+ M+IPY+PML+PP NW GYDKGG+LF
Sbjct: 378 FKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKNWKGYDKGGYLF 437
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSYVMRTHG ++Q++A+++ P +Q++ VFEAL+TLGHTKWR+N+KVL VV+ +WASGG
Sbjct: 438 LPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLGVVENLWASGGN 497
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+ LV+ DDVPLPE+P T+D A+I NRER++ RCD+ELK++VA+KMKD
Sbjct: 498 IGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVELKISVAQKMKD 557
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG+LEFA GRPLGK+G WLKIHLAN+YA
Sbjct: 558 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRPLGKTGLHWLKIHLANVYA 617
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGVDKLS E R +F E+H++++FDSA P+ G RWWL+AEDPFQCLA CI LT AL SSS
Sbjct: 618 GGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQCLAACIDLTGALNSSS 677
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P +FIS++P+HQDGSCNGLQHYAALGRD AAAVNLVAGE+PADVYS IA RV +IM
Sbjct: 678 PHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEEPADVYSEIAVRVREIMEK 737
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D++KDP P A+ A+ LV+QVDRKLVKQTVMTSVYGVT++GAREQIKRRL+E+ V +DD
Sbjct: 738 DSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGVITDD 797
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVT++AL ++FQ AR IM+WLG+CAKVIASENQPVRWTTPLGLPVVQPY
Sbjct: 798 RLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPY 857
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
K RH+IKTSLQ+L LQ+E + + VK+QRTAFPPN+VHSLDG+HMMMTAVAC+ AGL F
Sbjct: 858 CKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGLQF 917
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
AGVHDS+WTHACDV+ MN+ILR KFVELY PILENLLE FQ
Sbjct: 918 AGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESFQ 959
>I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=2
Length = 951
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/691 (64%), Positives = 550/691 (79%), Gaps = 5/691 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE EAG+ + + +KLRK V L+K++++ V+ ++K++
Sbjct: 234 EVRIHKFLEKTRSHQSKKT---EAGDEDSMDNDKQKLRKHVNGLIKRRRLKQVQMLLKEK 290
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA-KK 143
++ PWG + K+GSRL+ELL++TA++ P +Q D PDIRPAF H F+ ++K +K
Sbjct: 291 -ESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPPDIRPAFRHKFKAISKNPEQK 349
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+ +G+IECDPL+L G+D+S K+M++PYMPMLVPP W GY+KGGHLFLPSY+MRTHG
Sbjct: 350 ILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWKGYEKGGHLFLPSYIMRTHGS 409
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
K+Q++ +K +KQ++ VFEALDTLG+TKWRVN+++L+VV+ +WA GG +A L+DR DVP
Sbjct: 410 KKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVVESLWAGGGNIAGLIDRKDVP 469
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
+PE P D QI N ER+S RCD ELKL+VA+KMKDEE FYYPHNVD
Sbjct: 470 IPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELKLSVAQKMKDEEGFYYPHNVD 529
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMH HLNHL D+CRG+LEFA+GRPLG+SG WLKIHLANLYAGG++KLS +GR
Sbjct: 530 FRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWLKIHLANLYAGGIEKLSYDGR 589
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F E+H+ DIFDSAD P+ G RWWL A+DPFQCLA CI L+EALRSSSP + I H+P+H
Sbjct: 590 LAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACINLSEALRSSSPNSVILHLPIH 649
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD L AAAVNLVA EKPADVYS IA RV DIMR D KDPA +P+
Sbjct: 650 QDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIAVRVHDIMRKDCIKDPAAYPN 709
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ L++Q+DRKLVKQTVMTSVYGVT++GAREQIKRRL+E+ + +D+ LF A+CYAA
Sbjct: 710 ALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDEKLLFAAACYAA 769
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL E+F AR IM WLG+CAKVIA ENQPVRWTTPLGLPVVQPY K RH+IKTS
Sbjct: 770 KVTLTALGEIFGAARVIMGWLGDCAKVIAFENQPVRWTTPLGLPVVQPYCKTERHLIKTS 829
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ L L+RE + V K+QR+AFPPNFVHSLDGSHMMMTA+AC+ AGL FAGVHDS+WTHA
Sbjct: 830 LQFLALRREGNAVDAKKQRSAFPPNFVHSLDGSHMMMTALACRDAGLCFAGVHDSFWTHA 889
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
CDV+ M++ILR KFVELY PILENLLEGF+
Sbjct: 890 CDVEKMSQILREKFVELYSMPILENLLEGFE 920
>M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1767
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/659 (65%), Positives = 543/659 (82%), Gaps = 1/659 (0%)
Query: 57 EDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPS 116
+ E LRKKV+ L+K +K+ V+ +++++ + + WG + K+GSRL+ELL+++A++Q P
Sbjct: 1048 QQEILRKKVMKLIKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPC 1107
Query: 117 DQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPML 176
D + D P+I PAF H+F+ ++KE K+ ++G+IECDPL+ KG D +A++MVIPY+PML
Sbjct: 1108 DSLADCPPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLPML 1167
Query: 177 VPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVN 236
+PP +W GYD GGHLFLPSYVMRTHG ++Q++A+K P+KQL+ VFEALDTLG TKWR+N
Sbjct: 1168 IPPKSWKGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRIN 1227
Query: 237 KKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQ 296
+++L V++ +W+ GG +A LVDR D+ LP+ P+T+D +I N E ++Q
Sbjct: 1228 RRILDVIEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQ 1287
Query: 297 RCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLG 356
RCD+ELKL+VA KM+DEE FYYPHN+DFRGRAYPMH HLNHL SD+CRGILEFA+G+PLG
Sbjct: 1288 RCDVELKLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLG 1347
Query: 357 KSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQ 416
KSG WLKIHLAN+Y GGV+KLS + R++F ++H+ DIFDSA+ P++G RWW++AEDPFQ
Sbjct: 1348 KSGLHWLKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQ 1407
Query: 417 CLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 476
CLA CI LT+AL+SSSP ISH+P+HQDGSCNGLQHYAALGRD L AAAVNLVAGEKPA
Sbjct: 1408 CLAACIDLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPA 1467
Query: 477 DVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAR 536
DVYS IA RV +I+R D++KDP + P AL A+ LV+QVDRKLVKQTVMTSVYGVTY+GAR
Sbjct: 1468 DVYSEIAMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAR 1527
Query: 537 EQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ 596
EQIKRRL+E+ + +DD LFGASCYAAKVTL AL EMF+ AR IM WLG+CAK+IASEN+
Sbjct: 1528 EQIKRRLEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASENE 1587
Query: 597 PVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRE-TDKVMVKRQRTAFPPNFVHSLDG 655
PV+WTTPLGLPVVQPYR RH I+TSLQ+LTLQRE +V VKRQ+TAFPPN+VHSLDG
Sbjct: 1588 PVKWTTPLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSQVSVKRQKTAFPPNYVHSLDG 1647
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA++CK AGL FAGVHDS+WTHACDVD MN+ILR +FV LY PILENLL+GFQ
Sbjct: 1648 SHMMMTAISCKNAGLHFAGVHDSFWTHACDVDRMNQILREEFVALYNIPILENLLDGFQ 1706
>B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0196710 PE=3 SV=1
Length = 589
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/531 (83%), Positives = 488/531 (91%)
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVD 244
YDKG HLFLPSYVMRTHG +QQREAVK P++QL+PVFEALDTLG TKWR+NK++L VVD
Sbjct: 30 YDKGAHLFLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVD 89
Query: 245 RIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKL 304
RIW SGGRL DLVDR+DVPLPE+P+T+DEA + ENRER+SQRCD ELKL
Sbjct: 90 RIWNSGGRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKL 149
Query: 305 AVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLK 364
AVARKMKDEE FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG +WLK
Sbjct: 150 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 209
Query: 365 IHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITL 424
IHLANL+AGGVDKLS +GR++FTE+H+DDIFDSAD+PLEG+RWWLNAEDPFQCLAVCI L
Sbjct: 210 IHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDL 269
Query: 425 TEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 484
TEALRSSSPETFISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA
Sbjct: 270 TEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAV 329
Query: 485 RVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 544
RVLDIMR DAQKDP +FPDALHA+ L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLK
Sbjct: 330 RVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 389
Query: 545 ERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPL 604
ER +DDT++F ASCYAAKVTLTAL EMF+ ARSIM+WLGECAK+IASEN+PVRWTTPL
Sbjct: 390 ERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPL 449
Query: 605 GLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 664
GLPVVQPYR GRH+IKTSLQ+LTLQ+ET+KVMVKRQRTAFPPNFVHSLDGSHMMMTAV
Sbjct: 450 GLPVVQPYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVT 509
Query: 665 CKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
CK+AGL FAGVHDSYWTHACDVD MNRILR KFVELYETP+LENLLE FQ+
Sbjct: 510 CKRAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQ 560
>K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc07g005930.2 PE=3 SV=1
Length = 992
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/692 (64%), Positives = 542/692 (78%), Gaps = 9/692 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH F+E + + +E LRK+V L+K+ ++ VR +M+ +
Sbjct: 280 EVRIHNFMEKTKKHQKHMTGAQGQEDMS---RETMILRKRVKSLIKRNRVVEVRKLMQSE 336
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKE-AKK 143
+ + WG + K+G RL+ELL +TAY+QPP DQ D PDIRPAF H FR T++ K
Sbjct: 337 -EPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKN 395
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+K+G+IECDPL++ G+DR+ K M+IPY+PMLVPP W GYDKGG+LFLPSY+MRTHG
Sbjct: 396 IVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 455
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
++Q++AV+ P KQ++ V+EALDTLG TKWRVNK++LSVV+ IWA GG +A LVDR DVP
Sbjct: 456 RRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVP 515
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
+PE +DD ++ N+E +SQRCD ELKL+VARK++DEE FYYPHN+D
Sbjct: 516 IPEL-HSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLD 574
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHPHLNHL SD+CRGILEFA+GRPLGKSG +WLK+HLA+LYAGG++KL + R
Sbjct: 575 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDAR 634
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F E+H+DDI DSA PL G RWWLNAEDP QCLA CI L+EA++S SP T ISH+P+H
Sbjct: 635 IAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIH 694
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD + AAAVNLVAGEKPADVY+ IA RV I+R D+ KDPA P+
Sbjct: 695 QDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPN 754
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ + DD LF ASCY
Sbjct: 755 ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCY-- 812
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
VTL AL E+FQ AR M WLG+CAKVIASENQPVRWTTPLGLPVVQPY K RH+I+TS
Sbjct: 813 -VTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 871
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
LQ+L LQRE D V V++QRTAFPPNFVHSLDGSHMMMTAVAC+ AGL FAGVHDS+WTHA
Sbjct: 872 LQVLALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHA 931
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQK 715
CDVD MNRILR KFVELY PILE+LLE FQ+
Sbjct: 932 CDVDQMNRILREKFVELYSMPILEDLLESFQE 963
>G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_7g017440 PE=3 SV=1
Length = 895
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/533 (83%), Positives = 487/533 (91%), Gaps = 2/533 (0%)
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVD 244
+DKGG+LFLPSYVMRTHGVKQQREAVK+ P+KQLEPVFEALDTLG+TKWRVN KVLSVVD
Sbjct: 334 FDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKVLSVVD 393
Query: 245 RIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKL 304
RIWA GGRLA LVDR+DV +PEE ++DDEA+ ENRERYS RCD ELKL
Sbjct: 394 RIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCDTELKL 453
Query: 305 AVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLK 364
AVARKMKDEE FYYPHN+DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSG WLK
Sbjct: 454 AVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLK 513
Query: 365 IHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITL 424
IHLANLY GGVDKLS EGR++F E+H+D+IFDSA++P+EGRRWWLNAEDPFQ LA C+TL
Sbjct: 514 IHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLAACMTL 573
Query: 425 TEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 484
TEAL+ S+PE+FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA
Sbjct: 574 TEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 633
Query: 485 RVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 544
RVL IM+ DAQKDP F +A HA+ LVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK
Sbjct: 634 RVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 693
Query: 545 ERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPL 604
ERD +DD++LFGA+CYAAKVTLTAL+EMF+GARSIMNWLG+CAKVIASEN+PV WTTPL
Sbjct: 694 ERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKVIASENEPVCWTTPL 753
Query: 605 GLPVVQPYRKLGRHI--IKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 662
GLPVVQPYR GRHI +KTSLQMLTL+RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA
Sbjct: 754 GLPVVQPYRYQGRHIVSVKTSLQMLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 813
Query: 663 VACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
+ACK+AGL+FAGVHDSYWTHACDVD+MNRILR KFVELYETPILENLLE FQ+
Sbjct: 814 IACKKAGLSFAGVHDSYWTHACDVDNMNRILREKFVELYETPILENLLESFQE 866
>K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 973
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/703 (64%), Positives = 535/703 (76%), Gaps = 7/703 (0%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKED-EKLRKKVIDLMKKQ 72
A + L +VRIHKF+E G++ + D EK R + L+KK
Sbjct: 246 AAVHIGMALEQEVRIHKFVEGNKSSQSKKTE----GDAEDSLDSDKEKQRNYLNSLLKKN 301
Query: 73 KIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH 132
++ V+ I++ + + PW + K+GSRLVELL+ TAY+ P +Q D PDIRPAF H
Sbjct: 302 RLREVQMILRKE-ECSPWSRDTQAKLGSRLVELLIDTAYVHSPVNQSADTPPDIRPAFRH 360
Query: 133 SFRTVT-KEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHL 191
F+ V +K +K+GII+CDPL+L GL++ AK+M+IPYMPML+PP W GYDKGGHL
Sbjct: 361 GFKAVPWHPGQKFSKKYGIIQCDPLVLVGLEKCAKHMLIPYMPMLIPPKKWKGYDKGGHL 420
Query: 192 FLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG 251
FLPSY+MRTHG K+Q++ +K Q++ VFEALD LG+TKWRVN++VL VV+ IWA GG
Sbjct: 421 FLPSYIMRTHGSKKQQDVMKNVDGAQMQKVFEALDILGNTKWRVNRRVLGVVESIWAGGG 480
Query: 252 RLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMK 311
+A LVD DVP P++P +D I N ER+S RCD ELKL+VARKMK
Sbjct: 481 NIAGLVDCKDVPKPDKPLVEDLKLIQEWKCNVRKAKKINLERHSLRCDTELKLSVARKMK 540
Query: 312 DEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLY 371
DEE FYYPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLY
Sbjct: 541 DEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLY 600
Query: 372 AGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSS 431
AGG++K S +GR+ F E H+ DIFDSAD P+ G RWWL AEDPFQCLA CI L+EALRSS
Sbjct: 601 AGGIEKQSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSS 660
Query: 432 SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR 491
SP +FISH+P+HQDGSCNGLQHYAALGRD L AAAVNLVA EKPADVY+ IA RV DIMR
Sbjct: 661 SPNSFISHLPIHQDGSCNGLQHYAALGRDDLEAAAVNLVAKEKPADVYTEIAVRVYDIMR 720
Query: 492 SDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSD 551
D+ KDP FP+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGAREQIKRRL E+ +D
Sbjct: 721 QDSNKDPDTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGFVTD 780
Query: 552 DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQP 611
D L+ ASCYAAKVTL AL E+F+ AR IM WLG+CAKVIA ENQ V WTTPLGLPVVQP
Sbjct: 781 DRLLYAASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVIACENQAVCWTTPLGLPVVQP 840
Query: 612 YRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLA 671
Y K R+ I+TSLQ+L LQRE V VK+QR+AFPPNFVHSLD SHMMMTA+AC AGL
Sbjct: 841 YCKTERYQIRTSLQLLALQREGSAVSVKKQRSAFPPNFVHSLDSSHMMMTALACNDAGLC 900
Query: 672 FAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
FAGVHDS+WTH CDV+ MN+ILR KFVELY PILENLLEGFQ
Sbjct: 901 FAGVHDSFWTHPCDVEKMNQILREKFVELYNMPILENLLEGFQ 943
>I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 943
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/659 (62%), Positives = 522/659 (79%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L+K++K+ + +++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 255 KEQAKCRKLVKSLVKRRKLTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSP 314
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQI D SPD RPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 315 ADQIPDSSPDFRPAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 374
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG TKWRV
Sbjct: 375 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 434
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ D+PLPE P+++D +I NRE ++
Sbjct: 435 NRRVHDVVETIWSRGGGIAGLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHA 494
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 495 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 554
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KLS +++F E+H+ DIFDSA P++G RWW+NAEDPF
Sbjct: 555 GKSGLRWLKIHLANKYGGGIEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPF 614
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L+ AL+SSSP T ISH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV GEKP
Sbjct: 615 QCLAACVDLSNALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 674
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IAARVLD++R D+ KDPA A+ LV+QVDRKLVKQTVMTSVYGVT+IGA
Sbjct: 675 ADIYSEIAARVLDVVREDSMKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGA 734
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ +DD L+ SCYA +VTL AL +MFQ AR+IM WLG+CAK+IAS+N
Sbjct: 735 RQQIMKRLQEKGHITDDKLLYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKN 794
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +RQ+ AFPPNFVHSLD
Sbjct: 795 QPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDTIATQRQKAAFPPNFVHSLDS 854
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 855 SHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQ 913
>K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria italica
GN=Si005787m.g PE=3 SV=1
Length = 966
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/658 (62%), Positives = 525/658 (79%)
Query: 57 EDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPS 116
E K RK+V L++++K+ + +++ + + + WG + K+GSRL+ELL+ +A++QPP+
Sbjct: 279 EQAKCRKRVKTLVRRRKMTEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPA 338
Query: 117 DQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPML 176
DQ D SPDIRPAF H R E + +K +IECD L+ +G + +A+++ IPY+PML
Sbjct: 339 DQTPDSSPDIRPAFRHVLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPML 398
Query: 177 VPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVN 236
VPP W GYDKGGHLFLPSY+MRTHGVK Q++A+K P+KQL+ VFEALD LG TKWRVN
Sbjct: 399 VPPKKWKGYDKGGHLFLPSYIMRTHGVKDQKDAIKSVPRKQLQKVFEALDILGSTKWRVN 458
Query: 237 KKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQ 296
++V VV+ IW+ GG +A LVD+ ++PLPE P+++D ++ NRE +++
Sbjct: 459 RRVHDVVETIWSRGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHAE 518
Query: 297 RCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLG 356
RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPLG
Sbjct: 519 RCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLG 578
Query: 357 KSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQ 416
KSG WLKIHLAN Y GGV+KLS EG+++F E+ + DIFDSA P++G RWW NAEDPFQ
Sbjct: 579 KSGLCWLKIHLANKYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNRWWTNAEDPFQ 638
Query: 417 CLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 476
CLA C+ L++AL+SSSP +SH+P+HQDGSCNGLQHYAALGRD +GA VNLV GEKPA
Sbjct: 639 CLAACMDLSDALKSSSPYRAVSHLPIHQDGSCNGLQHYAALGRDYMGAVVVNLVPGEKPA 698
Query: 477 DVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAR 536
D+YS IAARVLD++R D+ KDPA P+A AR LV+QVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 699 DIYSEIAARVLDVVREDSMKDPATNPNASLARVLVDQVDRKLVKQTVMTSVYGVTYIGAR 758
Query: 537 EQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ 596
+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+CAK+IAS+NQ
Sbjct: 759 QQITKRLQEKGLITDDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKNQ 818
Query: 597 PVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 656
PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + V+RQ+ AFPPNFVHSLD S
Sbjct: 819 PVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIAVQRQKAAFPPNFVHSLDSS 878
Query: 657 HMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
HMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 879 HMMMTAIACKEAGLDFAGVHDSFWVHACDVDQMNQILREQFVELYSMPILENLLEEFQ 936
>B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_22187 PE=3 SV=1
Length = 946
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 530/668 (79%), Gaps = 1/668 (0%)
Query: 48 AGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
AGE+ + KE K RK+V L++++K+ + I++ + + + WG + K+G+RL+ELL
Sbjct: 249 AGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELL 308
Query: 107 MQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK 166
+ +A++Q P+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+
Sbjct: 309 LDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTAR 368
Query: 167 NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALD 226
++ IPY+PMLV P W GYD GG+LFLPSY+MRTHGVK Q+EA+K P+KQL VFEALD
Sbjct: 369 HVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALD 428
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
TLG TKWRVN++V + V+ IW+ GG +A LVD++++PLPE P+T+D +I
Sbjct: 429 TLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKA 488
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMH HL+HLGSD+CRG+
Sbjct: 489 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGV 548
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +V+F E+ + DIFDSA P++G
Sbjct: 549 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNC 608
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L++AL+SSSP+ +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 609 WWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 668
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPAD+YS IAARVLD++R D+ +DPA P A AR LV+QVDRKLVKQTVMTS
Sbjct: 669 VNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTS 728
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+
Sbjct: 729 VYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGD 788
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAK+IASEN PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFP
Sbjct: 789 CAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFP 848
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLD SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL
Sbjct: 849 PNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPIL 908
Query: 707 ENLLEGFQ 714
ENLL+ FQ
Sbjct: 909 ENLLKEFQ 916
>Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT2 PE=2 SV=1
Length = 953
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 530/668 (79%), Gaps = 1/668 (0%)
Query: 48 AGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
AGE+ + KE K RK+V L++++K+ + I++ + + + WG + K+G+RL+ELL
Sbjct: 256 AGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELL 315
Query: 107 MQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK 166
+ +A++Q P+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+
Sbjct: 316 LDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTAR 375
Query: 167 NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALD 226
++ IPY+PMLV P W GYD GG+LFLPSY+MRTHGVK Q+EA+K P+KQL VFEALD
Sbjct: 376 HVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALD 435
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
TLG TKWRVN++V + V+ IW+ GG +A LVD++++PLPE P+T+D +I
Sbjct: 436 TLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKA 495
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMH HL+HLGSD+CRG+
Sbjct: 496 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGV 555
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +V+F E+ + DIFDSA P++G
Sbjct: 556 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNC 615
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L++AL+SSSP+ +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 616 WWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 675
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPAD+YS IAARVLD++R D+ +DPA P A AR LV+QVDRKLVKQTVMTS
Sbjct: 676 VNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTS 735
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+
Sbjct: 736 VYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGD 795
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAK+IASEN PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFP
Sbjct: 796 CAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFP 855
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLD SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL
Sbjct: 856 PNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPIL 915
Query: 707 ENLLEGFQ 714
ENLL+ FQ
Sbjct: 916 ENLLKEFQ 923
>Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=2
Length = 949
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/659 (62%), Positives = 519/659 (78%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L++++K + +++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 261 KEQAKCRKLVKSLVRRRKSTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSP 320
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQ D SPD RPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 321 ADQTPDSSPDFRPAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 380
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG TKWRV
Sbjct: 381 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 440
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ ++PLPE+P+T+D +I NRE ++
Sbjct: 441 NRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHA 500
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 501 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 560
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KLS E +++F E H+ DIFDSA P++G WW+NAEDPF
Sbjct: 561 GKSGLRWLKIHLANKYGGGIEKLSHESKLTFVEDHLPDIFDSAANPVDGNCWWINAEDPF 620
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L+ AL SSSP +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV GEKP
Sbjct: 621 QCLAACMDLSNALESSSPHGAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 680
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IAARVLD++R D+ KDPA P A+ LV++VDRKLVKQTVMTSVYGVT+IGA
Sbjct: 681 ADIYSEIAARVLDVVREDSMKDPATDPSVPLAKVLVDEVDRKLVKQTVMTSVYGVTFIGA 740
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ +DD L+ SCYA +VTL AL +MFQ AR+IM WLG+CAK+IAS+N
Sbjct: 741 RQQIMKRLQEKGHITDDKLLYDVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKN 800
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPVRWT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +RQ+ AFPPNFVHSLD
Sbjct: 801 QPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDS 860
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 861 SHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQ 919
>A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_23934 PE=3 SV=1
Length = 950
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 530/668 (79%), Gaps = 1/668 (0%)
Query: 48 AGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
AGE+ + KE K RK+V L++++K+ + I++ + + + WG + K+G+RL+ELL
Sbjct: 253 AGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELL 312
Query: 107 MQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK 166
+ +A++Q P+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+
Sbjct: 313 LDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTAR 372
Query: 167 NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALD 226
++ IPY+PMLV P W GYD GG+LFLPSY+MRTHGVK Q+EA+K P+KQL VFEALD
Sbjct: 373 HVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALD 432
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
TLG TKWRVN++V + V+ IW+ GG +A LVD++++PLPE P+T+D +I
Sbjct: 433 TLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKA 492
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMH HL+HLGSD+CRG+
Sbjct: 493 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGV 552
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +V+F E+ + DIFDSA P++G
Sbjct: 553 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNC 612
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L++AL+SSSP+ +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 613 WWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 672
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPAD+YS IAARVLD++R D+ +DPA P A AR LV+QVDRKLVKQTVMTS
Sbjct: 673 VNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTS 732
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+
Sbjct: 733 VYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGD 792
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAK+IASEN PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFP
Sbjct: 793 CAKMIASENYPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFP 852
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLD SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL
Sbjct: 853 PNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPIL 912
Query: 707 ENLLEGFQ 714
ENLL+ FQ
Sbjct: 913 ENLLKEFQ 920
>Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=P0453H04.42 PE=2 SV=1
Length = 806
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/668 (61%), Positives = 530/668 (79%), Gaps = 1/668 (0%)
Query: 48 AGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
AGE+ + KE K RK+V L++++K+ + I++ + + + WG + K+G+RL+ELL
Sbjct: 109 AGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELL 168
Query: 107 MQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK 166
+ +A++Q P+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+
Sbjct: 169 LDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTAR 228
Query: 167 NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALD 226
++ IPY+PMLV P W GYD GG+LFLPSY+MRTHGVK Q+EA+K P+KQL VFEALD
Sbjct: 229 HVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALD 288
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
TLG TKWRVN++V + V+ IW+ GG +A LVD++++PLPE P+T+D +I
Sbjct: 289 TLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKA 348
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMH HL+HLGSD+CRG+
Sbjct: 349 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGV 408
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +V+F E+ + DIFDSA P++G
Sbjct: 409 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNC 468
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L++AL+SSSP+ +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 469 WWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 528
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPAD+YS IAARVLD++R D+ +DPA P A AR LV+QVDRKLVKQTVMTS
Sbjct: 529 VNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTS 588
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+
Sbjct: 589 VYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGD 648
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAK+IASEN PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFP
Sbjct: 649 CAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFP 708
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLD SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL
Sbjct: 709 PNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPIL 768
Query: 707 ENLLEGFQ 714
ENLL+ FQ
Sbjct: 769 ENLLKEFQ 776
>I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 949
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/668 (61%), Positives = 529/668 (79%), Gaps = 1/668 (0%)
Query: 48 AGESATEI-KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
AGE+ + KE K RK+V L++++K+ + I++ + + + WG + K+G+RL+ELL
Sbjct: 252 AGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELL 311
Query: 107 MQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK 166
+ +A++Q P+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+
Sbjct: 312 LDSAFVQSPADQTPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTAR 371
Query: 167 NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALD 226
++ IPY+PMLV P W GYD GG+ FLPSY+MRTHGVK Q+EA+K P+KQL VFEALD
Sbjct: 372 HVEIPYLPMLVTPKKWKGYDTGGYFFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALD 431
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
TLG TKWRVN++V + V+ IW+ GG +A LVD++++PLPE P+T+D +I
Sbjct: 432 TLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDKIQKWKWSLKKA 491
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMH HL+HLGSD+CRG+
Sbjct: 492 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGV 551
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +V+F E+ + DIFDSA P++G
Sbjct: 552 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNC 611
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L++AL+SSSP+ +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 612 WWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 671
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNLV G+KPAD+YS IAARVLD++R D+ +DPA P A AR LV+QVDRKLVKQTVMTS
Sbjct: 672 VNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTS 731
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVTYIGAR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+
Sbjct: 732 VYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGD 791
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
CAK+IASEN PV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFP
Sbjct: 792 CAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFP 851
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNFVHSLD SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL
Sbjct: 852 PNFVHSLDSSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPIL 911
Query: 707 ENLLEGFQ 714
ENLL+ FQ
Sbjct: 912 ENLLKEFQ 919
>M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004010 PE=3 SV=1
Length = 902
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/691 (61%), Positives = 519/691 (75%), Gaps = 48/691 (6%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+ RI F++ T KE KL+K++ L+KK K+ V GI+K
Sbjct: 231 EARIKSFMQKGKMKNATSNTEAVDALGETGTKEAVKLKKQINTLLKKHKVRRVSGIVKAH 290
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ KPWG + KVG+RL++LL++TAYIQPP++Q DG P+IRPAF + + VT E K
Sbjct: 291 DSFKPWGQEAQVKVGARLIQLLLETAYIQPPAEQFDDGPPEIRPAFKQTSKNVTLENTKL 350
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G IECDPLI KGLD+SA+++VIPY+PML+PP NWTGYD+G H FLPSY+MRT+G K
Sbjct: 351 SRRYGCIECDPLIRKGLDKSARHVVIPYLPMLIPPRNWTGYDQGAHFFLPSYLMRTNGSK 410
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
QQR V + PK QLEPVF+ALDTLG+TKWR+NKKVLS+VDRIWA+GGRL LVDRDDVP+
Sbjct: 411 QQRIVVNKTPKAQLEPVFKALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDRDDVPI 470
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PEEPD +D+ ++ EN ER+SQRCD+ELKL VARKMK+EE FY+PHNVDF
Sbjct: 471 PEEPDGEDQEELKQWKWKFKEANKENSERHSQRCDVELKLEVARKMKEEEGFYFPHNVDF 530
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRGILEF +G+PLG+SG +WLK+H+ANLYAGGVDK SL
Sbjct: 531 RGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKVHIANLYAGGVDKGSL---- 586
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
ALRSS PE ISHIP+HQ
Sbjct: 587 -----------------------------------------SALRSSVPEAAISHIPIHQ 605
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDK GAAAVNL GEKPAD+Y+ IAARVL IM+ DA++DP FP
Sbjct: 606 DGSCNGLQHYAALGRDKTGAAAVNLFTGEKPADIYADIAARVLKIMQKDAEEDPETFP-- 663
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
+A+ +++QVDRKLVKQTVMT+VYGVTY GAR QIK+RLKER F+DD++ F A+ YAA+
Sbjct: 664 -YAKLMLDQVDRKLVKQTVMTTVYGVTYSGARNQIKKRLKERGAFADDSQNFHAAYYAAR 722
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VT ALEEMF AR+IM W GECAK+IAS+N+PV WTTPLGLPVVQPYR+ GRH++KT+L
Sbjct: 723 VTTNALEEMFGAARAIMIWFGECAKIIASQNKPVCWTTPLGLPVVQPYRQPGRHLVKTTL 782
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LT++R+T+KV ++Q TAF PNFVHSLD SHMMMTAVAC +AGL+FAGVHDS+WTHA
Sbjct: 783 QVLTIKRDTEKVKARKQMTAFAPNFVHSLDASHMMMTAVACNKAGLSFAGVHDSFWTHAS 842
Query: 685 DVDDMNRILRGKFVELYETPILENLLEGFQK 715
DVD MNRILR KFVELY+ P+LENLLE FQK
Sbjct: 843 DVDVMNRILREKFVELYDKPVLENLLESFQK 873
>I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 915
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/654 (62%), Positives = 518/654 (79%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L+K++K+ + +++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 255 KEQAKCRKLVKSLVKRRKLTEAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSP 314
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQI D SPD RPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 315 ADQIPDSSPDFRPAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 374
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG TKWRV
Sbjct: 375 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 434
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ D+PLPE P+++D +I NRE ++
Sbjct: 435 NRRVHDVVETIWSRGGGIAGLVDKGDIPLPERPESEDPDEIQKWKWSLKKAKKINRELHA 494
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 495 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 554
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KLS +++F E+H+ DIFDSA P++G RWW+NAEDPF
Sbjct: 555 GKSGLRWLKIHLANKYGGGIEKLSHGSKLAFVENHLPDIFDSAANPVDGNRWWINAEDPF 614
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L+ AL+SSSP T ISH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV GEKP
Sbjct: 615 QCLAACVDLSNALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 674
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IAARVLD++R D+ KDPA A+ LV+QVDRKLVKQTVMTSVYGVT+IGA
Sbjct: 675 ADIYSEIAARVLDVVREDSMKDPATDASVSLAKVLVDQVDRKLVKQTVMTSVYGVTFIGA 734
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ +DD L+ SCYA +VTL AL +MFQ AR+IM WLG+CAK+IAS+N
Sbjct: 735 RQQIMKRLQEKGHITDDKLLYEVSCYATRVTLDALGQMFQSARAIMAWLGDCAKMIASKN 794
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +RQ+ AFPPNFVHSLD
Sbjct: 795 QPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDTIATQRQKAAFPPNFVHSLDS 854
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILEN+
Sbjct: 855 SHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENV 908
>Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=2 SV=1
Length = 948
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/659 (61%), Positives = 519/659 (78%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L++++K+ + +++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 260 KEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSP 319
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
++Q D SPD RPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 320 ANQTPDNSPDFRPAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 379
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG TKWRV
Sbjct: 380 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 439
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD++++PLPE P+T+D +I NRE ++
Sbjct: 440 NRRVHDVVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHA 499
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+ +GRPL
Sbjct: 500 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPL 559
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KL+ E +++F E + IFDSA P++G WW+NAEDPF
Sbjct: 560 GKSGLRWLKIHLANKYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDPF 619
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA CI L++AL+SSSP +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV GEKP
Sbjct: 620 QCLAACIDLSDALKSSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 679
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IAARVL+++R D+ KDPA P AR LV+QVDRKLVKQTVMTSVYGVT+IGA
Sbjct: 680 ADIYSEIAARVLNVVREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGA 739
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ +D+ L+ SCYAA+VTL AL +MFQ AR IM WLG+CAK+IAS+N
Sbjct: 740 RQQIMKRLQEKGHITDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKMIASKN 799
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPVRWT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +RQ+ AFPPNFVHSLD
Sbjct: 800 QPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDS 859
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 860 SHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQ 918
>Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays GN=rpoT2 PE=2
SV=1
Length = 952
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/659 (61%), Positives = 522/659 (79%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK+V L+K++K++ + +++ + + + WG + K+GSRL+ELL+ +A++QPP
Sbjct: 264 KEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPP 323
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQ D SPDIRPAF H R E + +K +IECD L+ +G + +A+++ IPY+PM
Sbjct: 324 ADQTPDSSPDIRPAFKHVLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPM 383
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSY+MRTHGVK Q++A+ P+KQL VFEALD LG TKWRV
Sbjct: 384 LVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRV 443
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ ++PLPE P+++D ++ NRE ++
Sbjct: 444 NRRVHDVVETIWSQGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHA 503
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 504 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 563
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG WLKIHLAN Y GG++KLS EG+++F E+ + DIFDSA P++G WW NAEDPF
Sbjct: 564 GKSGLCWLKIHLANKYGGGIEKLSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPF 623
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L++ALRS SP +SH+P+HQDGSCNGLQHYAALGRD +GA AVNLV GEKP
Sbjct: 624 QCLAACMDLSDALRSPSPYHAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKP 683
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IA+RVL+++ D+ KDPA P A AR LV+QVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 684 ADIYSEIASRVLNVVCEDSMKDPATNPTASLARALVDQVDRKLVKQTVMTSVYGVTYIGA 743
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+CAK+IAS+N
Sbjct: 744 RQQITKRLQEKGLITDDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKN 803
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFPPNFVHSLD
Sbjct: 804 QPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLDS 863
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ACK++GL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 864 SHMMMTAIACKESGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQ 922
>O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays GN=RpoT PE=3
SV=1
Length = 952
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/659 (61%), Positives = 522/659 (79%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK+V L+K++K++ + +++ + + + WG + K+GSRL+ELL+ +A++QPP
Sbjct: 264 KEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPP 323
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQ D SPDIRPAF H R E + +K +IECD L+ +G + +A+++ IPY+PM
Sbjct: 324 ADQTPDSSPDIRPAFKHVLRQPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPM 383
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSY+MRTHGVK Q++A+ P+KQL VFEALD LG TKWRV
Sbjct: 384 LVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRV 443
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ ++PLPE P+++D ++ NRE ++
Sbjct: 444 NRRVHDVVETIWSQGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHA 503
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 504 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 563
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG WLKIHLAN Y GG++KLS EG+++F E+ + DIFDSA P++G WW NAEDPF
Sbjct: 564 GKSGLCWLKIHLANKYGGGIEKLSHEGKLAFVENQLFDIFDSAANPVDGNCWWTNAEDPF 623
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L++ALRS SP +SH+P+HQDGSCNGLQHYAALGRD +GA AVNLV GEKP
Sbjct: 624 QCLAACMDLSDALRSPSPYHAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKP 683
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IA+RVL+++ D+ KDPA P A AR LV+QVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 684 ADIYSEIASRVLNVVCEDSMKDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGA 743
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+CAK+IAS+N
Sbjct: 744 RQQITKRLQEKGLITDDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASKN 803
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFPPNFVHSLD
Sbjct: 804 QPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLDS 863
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ACK++GL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 864 SHMMMTAIACKESGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILENLLEEFQ 922
>Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=3 SV=1
Length = 948
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/659 (61%), Positives = 518/659 (78%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L++++K+ + +++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 260 KEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGAEAQVKLGTRLIELLLDSAFVQSP 319
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
++Q D SPD RPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 320 ANQTPDNSPDFRPAFKHVLRKPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 379
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG TKWRV
Sbjct: 380 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRV 439
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD++++PLPE P+T+D +I NRE ++
Sbjct: 440 NRRVHDVVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWRWSVKKTKKTNRELHA 499
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+ +GRPL
Sbjct: 500 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYGEGRPL 559
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KL+ E +++F E + IFDSA P++G WW+NAED F
Sbjct: 560 GKSGLRWLKIHLANKYGGGIEKLTHESKLAFVEDRLPAIFDSAANPVDGNCWWINAEDSF 619
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA CI L++AL+SSSP +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV GEKP
Sbjct: 620 QCLAACIDLSDALKSSSPHAAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKP 679
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
AD+YS IAARVL+++R D+ KDPA P AR LV+QVDRKLVKQTVMTSVYGVT+IGA
Sbjct: 680 ADIYSEIAARVLNVVREDSMKDPATDPSVPLARVLVDQVDRKLVKQTVMTSVYGVTFIGA 739
Query: 536 REQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN 595
R+QI +RL+E+ +D+ L+ SCYAA+VTL AL +MFQ AR IM WLG+CAK+IAS+N
Sbjct: 740 RQQIMKRLQEKGHITDEKLLYDVSCYAARVTLDALGQMFQSARGIMAWLGDCAKMIASKN 799
Query: 596 QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
QPVRWT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +RQ+ AFPPNFVHSLD
Sbjct: 800 QPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIATQRQKAAFPPNFVHSLDS 859
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PILENLLE FQ
Sbjct: 860 SHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVELYSMPILENLLEEFQ 918
>J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) OS=Oryza
brachyantha GN=OB06G30770 PE=3 SV=1
Length = 845
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/660 (61%), Positives = 521/660 (78%), Gaps = 1/660 (0%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K R++V L++++K+ + I++ + + + WG + K+G+RL+ELL+ +A++Q P
Sbjct: 156 KEQAKCRERVKSLVRRRKLTEAQKIVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSP 215
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQ + SPDIRPAF H R E + +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 216 ADQKPESSPDIRPAFKHVLRQPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPM 275
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GYD GG+LFLPSY+MRTHGVK Q+EA+K P+KQL VFEALDTLG TKWRV
Sbjct: 276 LVPPKKWKGYDSGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRV 335
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V V+ IW+ GG +A LVD+ ++PLPE P+++D +I NRE ++
Sbjct: 336 NRRVHDAVEAIWSRGGGIAGLVDKGNIPLPERPESEDPDEIQKWKWGLKKAKKTNRELHA 395
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 396 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 455
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG +WLKIHLAN Y GG++KLS EG+V+F E+ + DIFDSA P++G WW+NAEDPF
Sbjct: 456 GKSGLRWLKIHLANKYGGGIEKLSHEGKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPF 515
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L++AL+SSSP +SH+P+HQDGSCNGLQHYAALGRD +GA AVNLV GEKP
Sbjct: 516 QCLAACMDLSDALKSSSPHCAVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKP 575
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVN-QVDRKLVKQTVMTSVYGVTYIG 534
AD+YS IA RVLD++R D+ KDPA P A AR + + QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 576 ADIYSEIATRVLDVVRQDSMKDPATNPTASLARHIGSLQVDRKLVKQTVMTSVYGVTYIG 635
Query: 535 AREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE 594
AR+QI +RL+E+ +DD L+ SCYA +VTL AL +MFQ AR IM WLG+CAK+IASE
Sbjct: 636 ARQQITKRLQEKGHITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASE 695
Query: 595 NQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLD 654
NQPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFPPNFVHSLD
Sbjct: 696 NQPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIALQRQKAAFPPNFVHSLD 755
Query: 655 GSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN ILR +FVELY PIL+NLL+ FQ
Sbjct: 756 SSHMMMTAIACKKAGLHFAGVHDSFWVHACDVDKMNHILREQFVELYSMPILQNLLKEFQ 815
>K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 884
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/650 (63%), Positives = 513/650 (78%), Gaps = 5/650 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE EAG+ + + +KLRK V L+K++++ V+ ++K++
Sbjct: 234 EVRIHKFLEKTRSHQSKKT---EAGDEDSMDNDKQKLRKHVNGLIKRRRLKQVQMLLKEK 290
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA-KK 143
++ PWG + K+GSRL+ELL++TA++ P +Q D PDIRPAF H F+ ++K +K
Sbjct: 291 -ESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPPDIRPAFRHKFKAISKNPEQK 349
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+ +G+IECDPL+L G+D+S K+M++PYMPMLVPP W GY+KGGHLFLPSY+MRTHG
Sbjct: 350 ILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWKGYEKGGHLFLPSYIMRTHGS 409
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
K+Q++ +K +KQ++ VFEALDTLG+TKWRVN+++L+VV+ +WA GG +A L+DR DVP
Sbjct: 410 KKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVVESLWAGGGNIAGLIDRKDVP 469
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
+PE P D QI N ER+S RCD ELKL+VA+KMKDEE FYYPHNVD
Sbjct: 470 IPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELKLSVAQKMKDEEGFYYPHNVD 529
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMH HLNHL D+CRG+LEFA+GRPLG+SG WLKIHLANLYAGG++KLS +GR
Sbjct: 530 FRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWLKIHLANLYAGGIEKLSYDGR 589
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++F E+H+ DIFDSAD P+ G RWWL A+DPFQCLA CI L+EALRSSSP + I H+P+H
Sbjct: 590 LAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACINLSEALRSSSPNSVILHLPIH 649
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD L AAAVNLVA EKPADVYS IA RV DIMR D KDPA +P+
Sbjct: 650 QDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIAVRVHDIMRKDCIKDPAAYPN 709
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
AL A+ L++Q+DRKLVKQTVMTSVYGVT++GAREQIKRRL+E+ + +D+ LF A+CYAA
Sbjct: 710 ALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDEKLLFAAACYAA 769
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
KVTLTAL E+F AR IM WLG+CAKVIA ENQPVRWTTPLGLPVVQPY K RH+IKTS
Sbjct: 770 KVTLTALGEIFGAARVIMGWLGDCAKVIAFENQPVRWTTPLGLPVVQPYCKTERHLIKTS 829
Query: 624 LQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFA 673
LQ L L+RE + V K+QR+AFPPNFVHSLDGSHMMMTA+AC+ AGL FA
Sbjct: 830 LQFLALRREGNAVDAKKQRSAFPPNFVHSLDGSHMMMTALACRDAGLCFA 879
>C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb10g025820 PE=3 SV=1
Length = 960
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/660 (61%), Positives = 518/660 (78%), Gaps = 1/660 (0%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK+V L+K++K++ + +++ + + + WG + K+GSRL+ELL+ +A++QPP
Sbjct: 271 KEQAKCRKRVKTLVKRRKMSEAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPP 330
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
+DQI D SPDIRPAF H R E + +K +IECD L+ G + +A+++ IPY+PM
Sbjct: 331 ADQIPDSSPDIRPAFKHVLRQPIIENGRLKKKHWVIECDHLVHDGFESTARHVDIPYLPM 390
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRV 235
LVPP W GY+KGGHLFLPSY+MRTHGVK Q++A+ P+KQL VFEALD LG TKWRV
Sbjct: 391 LVPPKKWKGYNKGGHLFLPSYIMRTHGVKDQKDAINSVPRKQLRKVFEALDILGSTKWRV 450
Query: 236 NKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
N++V VV+ IW+ GG +A LVD+ ++PLPE P+++D ++ NRE ++
Sbjct: 451 NRRVHDVVETIWSRGGGIAGLVDKANIPLPERPESEDPDEMQKWKWSLKKAKKTNRELHA 510
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
+RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A+GRPL
Sbjct: 511 ERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPL 570
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
GKSG WLKIHLAN Y GGV+KLS EG+++F E+ + DIFDSA P++G WW NAEDPF
Sbjct: 571 GKSGLCWLKIHLANKYGGGVEKLSHEGKLAFVENQLLDIFDSAANPVDGNCWWTNAEDPF 630
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
QCLA C+ L++AL S SP +SH+P+HQDGSCNGLQHYAALGRD +GA AVNLV GEKP
Sbjct: 631 QCLAACMDLSDALNSPSPYRTVSHLPIHQDGSCNGLQHYAALGRDYMGAVAVNLVPGEKP 690
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDA-LHARTLVNQVDRKLVKQTVMTSVYGVTYIG 534
AD+YS IAARVL+++R D+ KDPA P A L QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 691 ADIYSEIAARVLNVVREDSMKDPATNPTASLDMGIGSLQVDRKLVKQTVMTSVYGVTYIG 750
Query: 535 AREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE 594
AR+QI +RL+E+ + +DD L+ SCYA +VTL AL +MFQ AR IM WLG+CAK+IAS+
Sbjct: 751 ARQQITKRLQEKGLIADDKLLYDVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASK 810
Query: 595 NQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLD 654
NQPV+WT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + ++RQ+ AFPPNFVHSLD
Sbjct: 811 NQPVKWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIAIQRQKAAFPPNFVHSLD 870
Query: 655 GSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHMMMTA+ACK+AGL FAGVHDS+W HACDVD MN+ILR +FVELY PIL+NLLE FQ
Sbjct: 871 SSHMMMTAIACKEAGLHFAGVHDSFWVHACDVDQMNQILRQQFVELYSMPILDNLLEEFQ 930
>M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra032120 PE=4 SV=1
Length = 940
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/703 (59%), Positives = 528/703 (75%), Gaps = 43/703 (6%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +V IH FL+ AG+S E+K+ + LRK+V L+++++
Sbjct: 251 AAVSIGIAIEHEVGIHNFLKRTRKN--------NAGDSQEEVKDKQLLRKRVNSLIRRKR 302
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + KPWG + K+GSRL+ELLM+TAY+QPP Q D P++RPAF H
Sbjct: 303 IIDALKVVKSEG-IKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEVRPAFRHK 361
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 362 FKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 421
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A+K K VFEALDTLG+TKWRVN+K+L VV+++WA GG
Sbjct: 422 LPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVVEKLWADGGN 481
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D +I NRER+S RCD+ELKL+VARKMKD
Sbjct: 482 IAGLVNREDVPIPEKPLSEDPEEIQTWKWSVRKAKKINRERHSLRCDVELKLSVARKMKD 541
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 542 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYA 601
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS +GR++F E+H+DDI DSA+ + G+RWWL AEDPFQCLA C+ L +AL+S S
Sbjct: 602 GGVEKLSHDGRLAFVENHLDDIIDSAENAVHGKRWWLKAEDPFQCLAACVILAQALKSPS 661
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + IS++P+HQ AAAVNLVAG+KPADVYS I+ RV +IM+
Sbjct: 662 PHSVISNLPIHQ-----------------FEAAAVNLVAGDKPADVYSEISLRVHEIMKK 704
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+NQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 705 DSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 764
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRWTTPLGLPVVQPY
Sbjct: 765 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPY 824
Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ RH++ V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 825 CRSERHLVD----------------VRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 868
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AGVHDSYWTHACDVD MNRILR KFVELY +PILE+LL+ FQ+
Sbjct: 869 AGVHDSYWTHACDVDTMNRILREKFVELYSSPILEDLLQSFQE 911
>B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chloroplast, putative
OS=Ricinus communis GN=RCOM_1406230 PE=4 SV=1
Length = 1000
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/694 (60%), Positives = 514/694 (74%), Gaps = 42/694 (6%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIH FLE +G + KE E LRK+V L++++K+ V+ ++K++
Sbjct: 271 EVRIHNFLEKTKNYQRKKTI---SGAQESLGKEKEILRKRVNSLIRRKKLIEVQKLVKNE 327
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKE-AKK 143
+ KPWG + K+GSRL+ELL +TA++QPP +Q D PD+RPAF H FR V +K
Sbjct: 328 -EMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSADVPPDVRPAFRHRFRIVKNNPGQK 386
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
+K+G+IEC+PL+LKGLD SAK+M+IPY PMLVPP W GY+KGGH FLPSY+MRTHG
Sbjct: 387 IVKKYGVIECNPLVLKGLDGSAKHMLIPYFPMLVPPKKWKGYNKGGHFFLPSYIMRTHGS 446
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
++Q++A+K P+ ++ VFEALDTLG+TKWRVN++VL VV+ IWA GG +A LVDR D
Sbjct: 447 RKQQDALKNVPRNHMQKVFEALDTLGNTKWRVNRRVLDVVESIWARGGNIAGLVDRKDAG 506
Query: 264 LPEEP---------DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEE 314
+ TD +++ NRER+ VARK+KDEE
Sbjct: 507 CHQSALLPVLMLFMKTDRTSEVRWSARKAKKT---NRERHLN--------DVARKLKDEE 555
Query: 315 AFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGG 374
FYYPHN+DFRGRAYPMHPHL HL SD+CRGILEFA+GRPLGKSG +WLKIHLANLY+GG
Sbjct: 556 GFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYSGG 615
Query: 375 VDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPE 434
V+KLS +GR++F E H+ DIFDSA+ P+ G RWWL AEDPFQCLA CI L+EAL+SSSP
Sbjct: 616 VEKLSHDGRLAFVEDHLADIFDSAENPVNGNRWWLTAEDPFQCLAACINLSEALKSSSPH 675
Query: 435 TFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDA 494
T ISH+P+HQ AAAVNLVAGEKPADVY+ IAARV +++ D+
Sbjct: 676 TVISHLPIHQPE-----------------AAAVNLVAGEKPADVYTEIAARVHELIERDS 718
Query: 495 QKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTK 554
KDPA P+AL A+ L++QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ +DD
Sbjct: 719 NKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGQITDDRL 778
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRK 614
LF ASCY AKVTLTAL E+FQ AR IM WLG+CAKVIASE+QPV+WTTPLGLPVVQPY K
Sbjct: 779 LFSASCYTAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVQWTTPLGLPVVQPYYK 838
Query: 615 LGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAG 674
RH+I+TSLQ+L LQRE V V++QRTAFPPNFVHSLDGSHMMMTAVAC+ A L FAG
Sbjct: 839 SERHLIRTSLQVLALQREGSSVKVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAG 898
Query: 675 VHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
VHDS+WTHACDVD MNRILR KFVELY ILEN
Sbjct: 899 VHDSFWTHACDVDLMNRILREKFVELYSMSILEN 932
>B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_580715 PE=3 SV=1
Length = 543
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/498 (81%), Positives = 454/498 (91%), Gaps = 1/498 (0%)
Query: 218 LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIX 277
E +F+ALDTLG+T+WRVNK+VLSVVDRIW++GG LADLVD DVPLPE+P+T+DEA +
Sbjct: 18 FELIFQALDTLGNTRWRVNKRVLSVVDRIWSNGGCLADLVDHSDVPLPEKPETEDEALLK 77
Query: 278 XXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNH 337
EN+ER++QRCDIELKLAVARKMKDEE FYYPHN+DFRGRAYPMHP+LNH
Sbjct: 78 KWKWKLRGVKKENKERHAQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNH 137
Query: 338 LGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDS 397
LGSD+CRGILEFA+GRPLGKSG +WLKIH+ANL+AGGVDKLS EGR++FTE+H+DDIFD
Sbjct: 138 LGSDLCRGILEFAEGRPLGKSGLRWLKIHIANLFAGGVDKLSYEGRIAFTENHLDDIFDC 197
Query: 398 ADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAAL 457
DKPL+G+RWWL+AEDPFQ LAVCI LTEALRSSSPET+ISHIPVHQDGSCNGLQHYAAL
Sbjct: 198 TDKPLDGKRWWLHAEDPFQFLAVCINLTEALRSSSPETYISHIPVHQDGSCNGLQHYAAL 257
Query: 458 GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRK 517
GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR DAQKDP +FPDAL A+ L+NQVDRK
Sbjct: 258 GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPDVFPDALRAKELINQVDRK 317
Query: 518 LVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGA 577
LVKQTVMTSVYGVTYIGAR+QIKRRLKER + ++++ +FG SCYAAKVTLTAL EMF+ A
Sbjct: 318 LVKQTVMTSVYGVTYIGARDQIKRRLKERGI-TEESDIFGCSCYAAKVTLTALGEMFEAA 376
Query: 578 RSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVM 637
RSIMNWLG+CAK+IASEN+PVRWTTPLGLPVVQPYRKLG IKTSLQ+L LQ+ETDKVM
Sbjct: 377 RSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKLGTRSIKTSLQVLILQKETDKVM 436
Query: 638 VKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKF 697
V+RQRTAFPPNFVHSLD SHMMMTAVACK AGL FAGVHDSYWTHACDVD+MNRILR KF
Sbjct: 437 VQRQRTAFPPNFVHSLDSSHMMMTAVACKGAGLNFAGVHDSYWTHACDVDEMNRILREKF 496
Query: 698 VELYETPILENLLEGFQK 715
VELYETPILENLLE F+K
Sbjct: 497 VELYETPILENLLESFEK 514
>K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 812
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/571 (70%), Positives = 475/571 (83%), Gaps = 5/571 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-----KEDEKLRKKVIDLMKKQKIAAVRG 79
+ RI++F++ E TE ++ +LRK+V LMKKQK G
Sbjct: 233 EARIYQFMKREKENKSSHLAPVEQSGKLTEENGEMEQKQSRLRKRVAGLMKKQKKLQAMG 292
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I+ Q+D K WG + KVGSRL++LL++TAYIQPP++QI DG PDI PAF H+ RT++
Sbjct: 293 IIGRQDDWKTWGQEAQVKVGSRLMQLLIETAYIQPPTNQIGDGPPDIHPAFRHTLRTLSN 352
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
E+++ R++G+IECDPL+ GL++SA++MVIPYMPMLVPP+NWTGYDKG +LFLPSYVMR
Sbjct: 353 ESQRETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 412
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
HG KQQREAVKRAPK QL+PVFEAL+TLG+TKWRVNK+VL V+D+IWA+GGRLADLVDR
Sbjct: 413 VHGAKQQREAVKRAPKSQLDPVFEALNTLGNTKWRVNKRVLCVIDQIWANGGRLADLVDR 472
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
++VP P+EPDT DEA+I EN ER+SQRCDIELKLAVARKMKDEEAFYYP
Sbjct: 473 ENVPSPKEPDTIDEAEIRKWKWKVKAVKKENSERHSQRCDIELKLAVARKMKDEEAFYYP 532
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYPMHP+LNHLGSD+CRGILEFA+GR LGKSG +WLKIHLANLYAGGVDKLS
Sbjct: 533 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLS 592
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+GR+SFTE+H+DDIFDSAD+PLEG+ WWL AEDPFQCLA CI L+EALRS +PET ISH
Sbjct: 593 YDGRISFTENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACINLSEALRSPTPETTISH 652
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
+PVHQDGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIAARVL+IM+ DA+KDP
Sbjct: 653 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMKRDAEKDPR 712
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
P+ALHAR L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER DD +LF AS
Sbjct: 713 TNPNALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDVELFAAS 772
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKV 590
CYAAK TLTALEEMF+ ARSIM WLG+CAKV
Sbjct: 773 CYAAKTTLTALEEMFEAARSIMGWLGDCAKV 803
>Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=3 SV=1
Length = 1087
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/639 (58%), Positives = 498/639 (77%), Gaps = 3/639 (0%)
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTV-T 138
+++ N +PWGP ++ KVGSRL+EL+++T+ ++ P+DQ ++RPAF H+ R
Sbjct: 420 VVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELRPAFKHTLRNYPI 479
Query: 139 KEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVM 198
K R +G+IECDP ++ LD+S ++MV+PYMPMLV P WTG+ GG+L L S +M
Sbjct: 480 KNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFYDGGYLHLKSTIM 539
Query: 199 RTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
RTHG K+ R+ + ++ + + +ALD LG T+W++N VL V++++W GGRLADLVD
Sbjct: 540 RTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQVWKDGGRLADLVD 599
Query: 259 RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYY 318
+DVPLP++P++DD +I N ER+S RCD ELKLA ARK++DEE F+Y
Sbjct: 600 AEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAAARKLRDEEGFFY 659
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHN+DFRGRAYP+HPHLNHLGSD+CRGIL+FA+GR LG +G +WLKIHLANLY G V K+
Sbjct: 660 PHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIHLANLYGGKVGKM 719
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
S + RV++ + ++ +FDSAD+PL+G RWWL+AEDPFQ LA C+ + A++S +PET++S
Sbjct: 720 SFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRNAIKSGNPETYVS 779
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
H+PVHQDGSCNGLQHYAALGRD++GA +VNLVAG+KPADVYSGIAARV +IM DAQKDP
Sbjct: 780 HLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARVREIMERDAQKDP 839
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA 558
A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI RLKER + T+++ A
Sbjct: 840 KTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKERGTIQEQTEMYRA 899
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 618
+CYAAK TL AL EMF+ AR IM+WLG+CAK+IAS + V+WTTPLGLPVVQPYRK GRH
Sbjct: 900 ACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLGLPVVQPYRKPGRH 959
Query: 619 IIKTSLQMLTLQR-ETDK-VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVH 676
++KTSLQ+L L+ + D+ V+V+RQ++AFPPNFVHSLD +HMMMTA+AC++AGL FAGVH
Sbjct: 960 LVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDSTHMMMTALACQEAGLTFAGVH 1019
Query: 677 DSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
DSYWTHA DV+ MN +LR KFVELY P+LENLL+ FQ+
Sbjct: 1020 DSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQE 1058
>Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=2 SV=1
Length = 1087
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/639 (58%), Positives = 498/639 (77%), Gaps = 3/639 (0%)
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTV-T 138
+++ N +PWGP ++ KVGSRL+EL+++T+ ++ P+DQ ++RPAF H+ R
Sbjct: 420 VVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELRPAFKHTLRNYPI 479
Query: 139 KEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVM 198
K R +G+IECDP ++ LD+S ++MV+PYMPMLV P WTG+ GG+L L S +M
Sbjct: 480 KNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFYDGGYLHLKSTIM 539
Query: 199 RTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
RTHG K+ R+ + ++ + + +ALD LG T+W++N VL V++++W GGRLADLVD
Sbjct: 540 RTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQMWKDGGRLADLVD 599
Query: 259 RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYY 318
+DVPLP++P++DD +I N ER+S RCD ELKLA ARK++DEE F+Y
Sbjct: 600 AEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAAARKLRDEEGFFY 659
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHN+DFRGRAYP+HPHLNHLGSD+CRGIL+FA+GR LG +G +WLKIHLANLY G V K+
Sbjct: 660 PHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIHLANLYGGKVGKM 719
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
S + RV++ + ++ +FDSAD+PL+G RWWL+AEDPFQ LA C+ + A++S +PET++S
Sbjct: 720 SFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRNAIKSGNPETYVS 779
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
H+PVHQDGSCNGLQHYAALGRD++GA +VNLVAG+KPADVYSGIAARV +IM DAQKDP
Sbjct: 780 HLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARVREIMERDAQKDP 839
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA 558
A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI RLKER + T+++ A
Sbjct: 840 KTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKERGTIQEQTEMYRA 899
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 618
+CYAAK TL AL EMF+ AR IM+WLG+CAK+IAS + V+WTTPLGLPVVQPYRK GRH
Sbjct: 900 ACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLGLPVVQPYRKPGRH 959
Query: 619 IIKTSLQMLTLQR-ETDK-VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVH 676
++KTSLQ+L L+ + D+ V+V+RQ++AFPPNFVHSLD +HMMMTA+AC++AGL FAGVH
Sbjct: 960 LVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDSTHMMMTALACQEAGLTFAGVH 1019
Query: 677 DSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
DSYWTHA DV+ MN +LR KFVELY P+LENLL+ FQ+
Sbjct: 1020 DSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQE 1058
>A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196123 PE=3 SV=1
Length = 1088
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/640 (59%), Positives = 499/640 (77%), Gaps = 4/640 (0%)
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTV-T 138
+++ N +PWGP ++ KVGSRL+EL+++T+ ++ P+DQ ++RPAF H+ R
Sbjct: 420 VVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELRPAFKHTLRNYPI 479
Query: 139 KEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVM 198
K R +G+IECDP ++ LD+S ++MV+PYMPMLV P WTG+ GG+L L S +M
Sbjct: 480 KNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFYDGGYLHLKSTIM 539
Query: 199 RTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
RTHG K+ R+ + ++ + + +ALD LG T+W++N VL V++++W GGRLADLVD
Sbjct: 540 RTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQMWKDGGRLADLVD 599
Query: 259 RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYY 318
+DVPLP++P++DD +I N ER+S RCD ELKLA ARK++DEE F+Y
Sbjct: 600 AEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAAARKLRDEEGFFY 659
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHN+DFRGRAYP+HPHLNHLGSD+CRGIL+FA+GR LG +G +WLKIHLANLY G V K+
Sbjct: 660 PHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIHLANLYGGKVGKM 719
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
S + RV++ + ++ +FDSAD+PL+G RWWL+AEDPFQ LA C+ + A++S +PET++S
Sbjct: 720 SFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRNAIKSGNPETYVS 779
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
H+PVHQDGSCNGLQHYAALGRD++GA +VNLVAG+KPADVYSGIAARV +IM DAQKDP
Sbjct: 780 HLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARVREIMERDAQKDP 839
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA 558
A +A+ L+ ++DRKLVKQTVMTSVYGVT++GAR QI RLKER + T+++ A
Sbjct: 840 KTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKERGTIQEQTEMYRA 899
Query: 559 SCYAAKV-TLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR 617
+CYAAKV TL AL EMF+ AR IM+WLG+CAK+IAS + V+WTTPLGLPVVQPYRK GR
Sbjct: 900 ACYAAKVTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLGLPVVQPYRKPGR 959
Query: 618 HIIKTSLQMLTLQR-ETDK-VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGV 675
H++KTSLQ+L L+ + D+ V+V+RQ++AFPPNFVHSLD +HMMMTA+AC++AGL FAGV
Sbjct: 960 HLVKTSLQVLALRNLDADQPVLVQRQKSAFPPNFVHSLDSTHMMMTALACQEAGLTFAGV 1019
Query: 676 HDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
HDSYWTHA DV+ MN +LR KFVELY P+LENLL+ FQ+
Sbjct: 1020 HDSYWTHAGDVEQMNSLLREKFVELYSQPVLENLLKSFQE 1059
>M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloroplastic
OS=Triticum urartu GN=TRIUR3_09671 PE=4 SV=1
Length = 921
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/677 (57%), Positives = 497/677 (73%), Gaps = 48/677 (7%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L++++K+ + +++ + + + WG + KV
Sbjct: 244 KEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKV----------------- 286
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTK-----EAKKTGRKFGIIECDPLILKGLDRSAKNMVI 170
F S T+T+ ++ +K +IECDPL+ +G + +A+++ I
Sbjct: 287 -------------CFPDSIPTITEFCLICYGRRLKKKHFVIECDPLVHEGFESTARHVEI 333
Query: 171 PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGH 230
PY+PMLVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFEALD LG
Sbjct: 334 PYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGG 393
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXEN 290
TKWRVN++V VV+ IW+ GG +A LVD+ ++PLPE+P+T+D +I N
Sbjct: 394 TKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKAN 453
Query: 291 RERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFA 350
RE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+LE+A
Sbjct: 454 RELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYA 513
Query: 351 DGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLN 410
+GRPLGKSG +WLKIHLAN Y GG++KLS E +++F E H+ DIFDSA P++G WW+N
Sbjct: 514 EGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKLAFVEDHLPDIFDSASNPVDGNCWWIN 573
Query: 411 AEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 470
AEDPFQCLA C+ L++AL S SP +SH+P+HQDGSCNGLQHYAALGRD +GAAAVNLV
Sbjct: 574 AEDPFQCLAACMDLSKALESPSPHDAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLV 633
Query: 471 AGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGV 530
GEKPAD+YS IAARVLD++R D+ KDPA P A+ LV++VDRKLVKQTVMTSVYGV
Sbjct: 634 PGEKPADIYSEIAARVLDVVREDSMKDPATDPSVSLAKVLVDEVDRKLVKQTVMTSVYGV 693
Query: 531 TYIGAREQIKRRLKERDVFSDDTKLFGASCYAA-------------KVTLTALEEMFQGA 577
T+IGAR+QIK+RL+E+ +DD L+ SCYA KVTL AL +MFQ A
Sbjct: 694 TFIGARQQIKKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSA 753
Query: 578 RSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVM 637
R+IM WLGECAK+IAS+NQPVRWT+P+GLPVVQPY+K ++I+TSLQ L L+RE D +
Sbjct: 754 RAIMAWLGECAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIA 813
Query: 638 VKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKF 697
+RQ+ AFPPNFVHSLD SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +F
Sbjct: 814 TQRQKAAFPPNFVHSLDSSHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQF 873
Query: 698 VELYETPILENLLEGFQ 714
VELY PILEN L+ Q
Sbjct: 874 VELYSMPILENDLKFSQ 890
>F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=SCA3 PE=2 SV=1
Length = 895
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/624 (61%), Positives = 482/624 (77%), Gaps = 10/624 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+KE + LRK+V L+++++
Sbjct: 271 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 322
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + TKPWG + K+GSRL+ELL++ AY+QPP Q D P+ RPAF H
Sbjct: 323 IIDALKVVKSEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 381
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 382 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 441
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A+K K VFEALDTLG+TKWRVN+ +L VV+R+WA GG
Sbjct: 442 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 501
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D ++ NRER+S RCD+ELKL+VARKMKD
Sbjct: 502 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 561
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 562 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 621
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 622 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 681
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 682 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 741
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
D+ KDP P A A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 742 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 801
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 802 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 861
Query: 613 RKLGRHIIKTSLQMLTLQRETDKV 636
+ RH+I+TSLQ+L LQRE + V
Sbjct: 862 CRSERHLIRTSLQVLALQREGNTV 885
>B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor) OS=Selaginella
moellendorffii GN=rpoT PE=3 SV=1
Length = 1002
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/660 (59%), Positives = 491/660 (74%), Gaps = 18/660 (2%)
Query: 59 EKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQ 118
+KLR+ +I+ + V+ I+K + ++PW ++ K+G RL++++M ++I P
Sbjct: 329 DKLRRAIIERPRN-----VKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSD 383
Query: 119 IVDGSPDIRPAFVHSFRTVTKEAKKTG--RKFGIIECDPLILKGLDRSAKNMVIPYMPML 176
+ +IRPAF H + K G R +G I CDP + +D SAK +V+PYMPML
Sbjct: 384 CPEDGTEIRPAFRHVLKV-----PKGGLLRSYGAIVCDPHLRGRIDDSAKFIVMPYMPML 438
Query: 177 VPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVN 236
+PP W GY G +L L S +MRTHG KQQREAV+ P+ QL+ VF ALDTLG W++N
Sbjct: 439 IPPRAWKGYHNGAYLHLRSVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKIN 498
Query: 237 KKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQ 296
K+V V++++W++GG + LVDR DVPLP +P+T+DEA++ N ER SQ
Sbjct: 499 KEVFEVIEKLWSAGGGIGGLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQ 558
Query: 297 RCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLG 356
RCD+ELKLAVAR +KDEE FYYPHN+DFRGRAYPMH HLNHLGSDVCRG+L FA GRPLG
Sbjct: 559 RCDLELKLAVARSLKDEECFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLG 618
Query: 357 KSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQ 416
+G +WLKIH+AN++A G DKL +GRV+F ES+++ + SA++PL+ RWWL AEDPFQ
Sbjct: 619 PTGLRWLKIHIANVFANGADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQ 677
Query: 417 CLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 476
CLA CI L A+ S +PE +ISH+PVHQDGSCNGLQHYAALGRDK GA AVNL+ + PA
Sbjct: 678 CLAACIDLRNAMHSPNPEYYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPA 737
Query: 477 DVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAR 536
DVYSGIAARV ++ DA+KDPA A++A+ LV VDRKLVKQTVMTSVYGVTY+GAR
Sbjct: 738 DVYSGIAARVRTLVEEDARKDPA----AVYAKLLVGHVDRKLVKQTVMTSVYGVTYVGAR 793
Query: 537 EQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ 596
QI RL+++ D+ L+ CYAAKVTL AL EMF AR IMNWLG+CAKVIA++
Sbjct: 794 NQITNRLRDKGFILDEPTLYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKVIANDGD 853
Query: 597 PVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDK-VMVKRQRTAFPPNFVHSLDG 655
VRW TPLGLPVVQPYR+ GRH++KT LQ L L+ +TD+ V+ RQR+AFPPNFVHS+DG
Sbjct: 854 SVRWITPLGLPVVQPYRRPGRHVVKTCLQCLILRTDTDQPVLAARQRSAFPPNFVHSMDG 913
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SHMMMTAVAC++AGL FAGVHDS+WTHA DV+ MN ILR KFVELYE PILENLLE FQK
Sbjct: 914 SHMMMTAVACQEAGLTFAGVHDSFWTHAGDVERMNVILREKFVELYEQPILENLLESFQK 973
>D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_108034 PE=3 SV=1
Length = 831
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/660 (59%), Positives = 491/660 (74%), Gaps = 18/660 (2%)
Query: 59 EKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQ 118
+KLR+ +I+ + V+ I+K + ++PW ++ K+G RL++++M ++I P
Sbjct: 158 DKLRRAIIERPRN-----VKEILKSLDPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSD 212
Query: 119 IVDGSPDIRPAFVHSFRTVTKEAKKTG--RKFGIIECDPLILKGLDRSAKNMVIPYMPML 176
+ +IRPAF H + K G R +G I CDP + +D SAK +V+PYMPML
Sbjct: 213 CPEDGTEIRPAFRHVLKV-----PKGGLLRSYGAIVCDPHLRGRIDDSAKFIVMPYMPML 267
Query: 177 VPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVN 236
+PP W GY G +L L S +MRTHG KQQREAV+ P+ QL+ VF ALDTLG W++N
Sbjct: 268 IPPRAWKGYHNGAYLHLRSVIMRTHGSKQQREAVRNTPRAQLQQVFRALDTLGAASWKIN 327
Query: 237 KKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQ 296
K+V V++++W++GG + LVDR DVPLP +P+T+DEA++ N ER SQ
Sbjct: 328 KEVFEVIEKLWSAGGGIGGLVDRKDVPLPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQ 387
Query: 297 RCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLG 356
RCD+ELKLAVAR +KDEE FYYPHN+DFRGRAYPMH HLNHLGSDVCRG+L FA GRPLG
Sbjct: 388 RCDLELKLAVARSLKDEECFYYPHNLDFRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLG 447
Query: 357 KSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQ 416
+G +WLKIH+AN++A G DKL +GRV+F ES+++ + SA++PL+ RWWL AEDPFQ
Sbjct: 448 PTGLRWLKIHIANVFANGADKLPFDGRVAFAESNLEHVVASANQPLKN-RWWLKAEDPFQ 506
Query: 417 CLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 476
CLA CI L A+ S +PE +ISH+PVHQDGSCNGLQHYAALGRDK GA AVNL+ + PA
Sbjct: 507 CLAACIDLRNAMHSPNPEYYISHLPVHQDGSCNGLQHYAALGRDKTGARAVNLIGADYPA 566
Query: 477 DVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAR 536
DVYSGIAARV ++ DA+KDPA A++A+ LV VDRKLVKQTVMTSVYGVTY+GAR
Sbjct: 567 DVYSGIAARVRTLVEEDARKDPA----AVYAKLLVGHVDRKLVKQTVMTSVYGVTYVGAR 622
Query: 537 EQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ 596
QI RL+++ D+ L+ CYAAKVTL AL EMF AR IMNWLG+CAKVIA++
Sbjct: 623 NQITNRLRDKGFILDEPTLYRTGCYAAKVTLNALGEMFGEARLIMNWLGQCAKVIANDGD 682
Query: 597 PVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDK-VMVKRQRTAFPPNFVHSLDG 655
VRW TPLGLPVVQPYR+ GRH++KT LQ L L+ +TD+ V+ RQR+AFPPNFVHS+DG
Sbjct: 683 SVRWITPLGLPVVQPYRRPGRHVVKTCLQCLILRTDTDQPVLAARQRSAFPPNFVHSMDG 742
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SHMMMTAVAC++AGL FAGVHDS+WTHA DV+ MN ILR KFVELYE PILENLLE FQK
Sbjct: 743 SHMMMTAVACQEAGLTFAGVHDSFWTHAGDVERMNVILREKFVELYEQPILENLLESFQK 802
>Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=2 SV=1
Length = 1065
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/647 (59%), Positives = 487/647 (75%), Gaps = 4/647 (0%)
Query: 71 KQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAF 130
+ K+ V I+K + +PW V+ K+GSRL+EL+++T++++ P+ Q D ++RPAF
Sbjct: 390 QNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAF 449
Query: 131 VHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGH 190
H F+ + R +G+IECD L+L +D+S K+MV+PYMPMLV P+ W G+++GG+
Sbjct: 450 QHKFKNHVLR-QNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 191 LFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
L+L S +MRT G K+QR AV P+K ++ V EAL+ LG T WRVNK+VL VV+++W +G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 251 GRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKM 310
G +ADLV+ DDVP+PE PDT D+ N ER+S RCD ELKL VA+K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVAKKL 628
Query: 311 KDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANL 370
DEEAFYYPHN+DFRGRAYPMHPHLNHLG+D+CRG+L FADG+PLG SG +W+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 371 YAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRS 430
Y G V K+S + R +F E +++I DSA++PL+G R WL AEDPFQ LA CI L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 431 SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 490
+PETF+SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+AG+KPADVYSGIA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVKIIM 808
Query: 491 RSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERD-VF 549
DA K+P +A AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKER +
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 550 SDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVV 609
D + A+CYAAKVTL AL EMF+ AR IM+WLG+CAK+IA+ VRWT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 610 QPYRKLGRHIIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQ 667
QPYRK RH++KTSLQ+L L+ D V+ RQR+AFPPNFVHSLD SHMMMTA+AC +
Sbjct: 929 QPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPPNFVHSLDSSHMMMTALACSK 988
Query: 668 AGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
AGL FAGVHDSYWTHA DV++MN ILR FV+LY+ PILENLL FQ
Sbjct: 989 AGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQ 1035
>A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223008 PE=3 SV=1
Length = 1065
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/647 (59%), Positives = 486/647 (75%), Gaps = 4/647 (0%)
Query: 71 KQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAF 130
+ K+ V I+K + +PW V+ K+GSRL+EL+++T++++ P+ Q D ++RPAF
Sbjct: 390 QNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAF 449
Query: 131 VHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGH 190
H F+ + R +G+IECD L+L +D+S K+MV+PYMPMLV P+ W G+++GG+
Sbjct: 450 QHKFKNHVLR-QNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 191 LFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
L+L S +MRT G K+QR AV P+K ++ V EAL+ LG T WRVNK+VL VV+++W +G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 251 GRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKM 310
G +ADLV+ DDVP+PE PDT D+ N ER+S RCD ELKL VA K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVANKL 628
Query: 311 KDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANL 370
DEEAFYYPHN+DFRGRAYPMHPHLNHLG+D+CRG+L FADG+PLG SG +W+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 371 YAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRS 430
Y G V K+S + R +F E +++I DSA++PL+G R WL AEDPFQ LA CI L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 431 SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 490
+PETF+SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+AG+KPADVYSGIA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVKIIM 808
Query: 491 RSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERD-VF 549
DA K+P +A AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKER +
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 550 SDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVV 609
D + A+CYAAKVTL AL EMF+ AR IM+WLG+CAK+IA+ VRWT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 610 QPYRKLGRHIIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQ 667
QPYRK RH++KTSLQ+L L+ D V+ RQR+AFPPNFVHSLD SHMMMTA+AC +
Sbjct: 929 QPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPPNFVHSLDSSHMMMTALACSK 988
Query: 668 AGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
AGL FAGVHDSYWTHA DV++MN ILR FV+LY+ PILENLL FQ
Sbjct: 989 AGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQ 1035
>Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=3 SV=1
Length = 1065
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/647 (59%), Positives = 486/647 (75%), Gaps = 4/647 (0%)
Query: 71 KQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAF 130
+ K+ V I+K + +PW V+ K+GSRL+EL+++T++++ P+ Q D ++RPAF
Sbjct: 390 QNKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAF 449
Query: 131 VHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGH 190
H F+ + R +G+IECD L+L +D+S K+MV+PYMPMLV P+ W G+++GG+
Sbjct: 450 QHKFKNHVLR-QNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 191 LFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
L+L S +MRT G K+QR AV P+K ++ V EAL+ LG T WRVNK+VL VV+++W +G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 251 GRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKM 310
G +ADLV+ DDVP+PE PDT D+ N ER+S RCD ELKL VA K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVADKL 628
Query: 311 KDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANL 370
DEEAFYYPHN+DFRGRAYPMHPHLNHLG+D+CRG+L FADG+PLG SG +W+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 371 YAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRS 430
Y G V K+S + R +F E +++I DSA++PL+G R WL AEDPFQ LA CI L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 431 SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 490
+PETF+SH+PVHQDGSCNGLQHYAALGRD++GA +VNL+AG+KPADVYSGIA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVEIIM 808
Query: 491 RSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERD-VF 549
DA K+P +A AR L Q+DRKLVKQTVMTSVYGVT+IGAR QI RLKER +
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 550 SDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVV 609
D + A+CYAAKVTL AL EMF+ AR IM+WLG+CAK+IA+ VRWT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 610 QPYRKLGRHIIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQ 667
QPYRK RH++KTSLQ+L L+ D V+ RQR+AFPPNFVHSLD SHMMMTA+AC +
Sbjct: 929 QPYRKHSRHLVKTSLQVLALRNTDDNHPVLASRQRSAFPPNFVHSLDSSHMMMTALACSK 988
Query: 668 AGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
AGL FAGVHDSYWTHA DV++MN ILR FV+LY+ PILENLL FQ
Sbjct: 989 AGLTFAGVHDSYWTHAGDVENMNVILRKNFVKLYKQPILENLLLDFQ 1035
>M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Triticum urartu
GN=TRIUR3_29385 PE=4 SV=1
Length = 854
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/685 (61%), Positives = 490/685 (71%), Gaps = 90/685 (13%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE A KE E+LRKKV DLMKKQKI VR ++K Q
Sbjct: 163 EVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKKQ 222
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ T+PWG KVGSRL+EL ++TA+IQPP+ Q D +P+IRPAF H RTV +E +K+
Sbjct: 223 DSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQQKS 282
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R++G+I+CDPL+ +GLDR+A + + W
Sbjct: 283 -RRYGVIKCDPLVRQGLDRTALDN--------LGSTKW---------------------- 311
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
R KK V +D + W ++ +VDR DV L
Sbjct: 312 -------RVNKK----VLSIVDRI----WSSGGRLADLVDRA--------------DVSL 342
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMK+E FYYPHN+DF
Sbjct: 343 PEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNLDF 402
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG+SG +WLKIHLANLY GGVDKLS +GR+
Sbjct: 403 RGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRI 462
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H+DDIFDSA++PLEG+RWWL AEDPFQCLAVC+ L EALRS SPET ISHIPVHQ
Sbjct: 463 AFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPVHQ 522
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIAARV++IM+ DAQKDPA DA
Sbjct: 523 DGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADA 582
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
AR LV+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLKER V +DD++LFGASCYAAK
Sbjct: 583 ARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAK 642
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
VTLTAL EMF+ ARSIM WLG+CAK IKTSL
Sbjct: 643 VTLTALGEMFEAARSIMTWLGDCAK------------------------------IKTSL 672
Query: 625 QMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHAC 684
Q+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHAC
Sbjct: 673 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHAC 732
Query: 685 DVDDMNRILRGKFVELYETPILENL 709
DVD MN+ILR KFVELY+ PILEN+
Sbjct: 733 DVDTMNKILREKFVELYDAPILENV 757
>M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Aegilops tauschii
GN=F775_25821 PE=4 SV=1
Length = 884
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/733 (58%), Positives = 492/733 (67%), Gaps = 133/733 (18%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQ 84
+VRIHKFLE A KE E+LRKKV DLMKKQKI VR ++K Q
Sbjct: 212 EVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKKQ 271
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
+ T+PWG KVGSRL+EL ++TA+IQPP+ Q S D P +F T E +
Sbjct: 272 DSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQ----SGDSTPEIRPAF---THEMRTV 324
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
R+ +S + VI P++
Sbjct: 325 ARE-------------QQKSRRYGVIKCDPLV---------------------------- 343
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
R+ + R ALD LG TKWRVNKKVLS+VDRIW+SGGRLADLVDR DV L
Sbjct: 344 --RQGLDRT----------ALDNLGSTKWRVNKKVLSIVDRIWSSGGRLADLVDRADVSL 391
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
PE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMK+E FYYPHN+DF
Sbjct: 392 PEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNLDF 451
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG+SG +WLKIHLANLY GGVDKLS +GR+
Sbjct: 452 RGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRI 511
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
+FTE+H++DIFDSA++PLEG+RWWL AEDPFQCLAVC+ L EALRS SPET ISHIPVHQ
Sbjct: 512 AFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPVHQ 571
Query: 445 -----------------DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 487
DGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIAARV+
Sbjct: 572 QQLHECRKDIQVQSKEEDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVV 631
Query: 488 DIMRSDAQKD------------------PAIFPDALHARTL--------VNQVDRKLVKQ 521
+IM+ DAQKD AI D + V QVDRKLVKQ
Sbjct: 632 EIMKRDAQKDPAKDADAARARLLVDQFVSAILHDLISVIAFSWYLIDSPVIQVDRKLVKQ 691
Query: 522 TVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIM 581
TVMTSVYGVTY+GAREQIKRRLKER V ++D++LFGASCYAAKVTLTAL EMF+ ARSIM
Sbjct: 692 TVMTSVYGVTYVGAREQIKRRLKERGVIAEDSELFGASCYAAKVTLTALGEMFEAARSIM 751
Query: 582 NWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQ 641
WLG+CAK IKTSLQ+LTLQRETDKVMVKRQ
Sbjct: 752 TWLGDCAK------------------------------IKTSLQVLTLQRETDKVMVKRQ 781
Query: 642 RTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELY 701
RTAFPPNFVHSLDGSHMMMTAVACK+ GL FAGVHDSYWTHACDVD MN+ILR KFVELY
Sbjct: 782 RTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELY 841
Query: 702 ETPILENLLEGFQ 714
+ PILENLLE F+
Sbjct: 842 DAPILENLLESFR 854
>N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloroplastic
OS=Aegilops tauschii GN=F775_25754 PE=4 SV=1
Length = 887
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/734 (53%), Positives = 496/734 (67%), Gaps = 100/734 (13%)
Query: 56 KEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPP 115
KE K RK V L++++K+ + +++ + + + WG + KV
Sbjct: 122 KEQAKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKVCF--------------- 166
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPM 175
PD P + ++ +K +IECDPL+ +G + +A+++ IPY+PM
Sbjct: 167 --------PDSTPTMTEF--CLICYGRRLKKKHFVIECDPLVHEGFESTARHVEIPYLPM 216
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFE---------ALD 226
LVPP W GYDKGGHLFLPSYVMRTHGVK Q+EA+K P+KQL VFE ALD
Sbjct: 217 LVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEQSEALSYWQALD 276
Query: 227 TLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXX 286
LG TKWRVN++V VV+ IW+ GG +A LVD+ ++PLPE+P+T+D +I
Sbjct: 277 ILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKT 336
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
NRE +++RCD ELKL+VARKM++E+ FYYPHN+DFRGRAYPMHPHL+HLGSD+CRG+
Sbjct: 337 KKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGV 396
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
LE+A+GRPLGKSG +WLKIHLAN Y GG++KLS E +++F E H+ DIFDSA P++G
Sbjct: 397 LEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKLTFVEDHLPDIFDSAANPVDGNC 456
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW+NAEDPFQCLA C+ L+ AL SSSP +SH+P+HQDGSCNGLQHYAALGRD +GAAA
Sbjct: 457 WWINAEDPFQCLAACMDLSNALESSSPHGAVSHLPIHQDGSCNGLQHYAALGRDYMGAAA 516
Query: 467 VNLVAGEKPADVYSGIAA------------------RVLDIMRSDAQKDPAIFPDALHAR 508
VNLV GEKPAD+YS IAA RVLD++R D+ KDPA P A+
Sbjct: 517 VNLVPGEKPADIYSEIAARCLPRRPPFPLPSLIYPGRVLDVVREDSMKDPATDPSVPLAK 576
Query: 509 TLVN-----------------------------------QVDRKLVKQTVMTSVYGVTYI 533
LV+ QVDRKLVKQTVMTSVYGVT+I
Sbjct: 577 VLVDEVSLLPAPLCLNQEIFFFMYLFFNKTVEDLDIGSLQVDRKLVKQTVMTSVYGVTFI 636
Query: 534 GAREQIKRRLKERDVFSDDTKLFGASCYAA-------------KVTLTALEEMFQGARSI 580
GAR+QI +RL+E+ +DD L+ SCYA KVTL AL +MFQ AR+I
Sbjct: 637 GARQQIMKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSARAI 696
Query: 581 MNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKR 640
M WLG+CAK+IAS+NQPVRWT+P+GLPVVQPY+K ++I+TSLQ L L+RE D + +R
Sbjct: 697 MAWLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMIRTSLQCLALRREGDAIATQR 756
Query: 641 QRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVEL 700
Q+ AFPPNFVHSLD SHMMMTA+ CK+AGL FAGVHDS+W HACDVD MN+ILR +FVEL
Sbjct: 757 QKAAFPPNFVHSLDSSHMMMTAITCKEAGLHFAGVHDSFWVHACDVDKMNQILREQFVEL 816
Query: 701 YETPILENLLEGFQ 714
Y PILENLLE FQ
Sbjct: 817 YSMPILENLLEEFQ 830
>B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_925854 PE=4 SV=1
Length = 528
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/531 (72%), Positives = 438/531 (82%), Gaps = 32/531 (6%)
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVD 244
YDKG HLFLPSYVMR HG KQQREAVKRAP+KQL+ VFEALDTLG+T+WRVNK+VLSVVD
Sbjct: 1 YDKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLQAVFEALDTLGNTRWRVNKRVLSVVD 60
Query: 245 RIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKL 304
RIW++GG LADLVD DVPLPE+P+T+DEA + EN+ER++QRCDIELKL
Sbjct: 61 RIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWKWKLRGVKKENKERHAQRCDIELKL 120
Query: 305 AVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLK 364
AVARKMKDEE FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGILEFA+GRPLGKSG +WLK
Sbjct: 121 AVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 180
Query: 365 IHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITL 424
IH+ANL+AGGVDKLS EGR++FTE+H+DDIFDSADKPL+G+RWWL+AEDPFQ LAVCI L
Sbjct: 181 IHIANLFAGGVDKLSYEGRIAFTENHLDDIFDSADKPLDGKRWWLHAEDPFQFLAVCINL 240
Query: 425 TEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 484
TEALRSSSPET+ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA
Sbjct: 241 TEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 300
Query: 485 RVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 544
R+ + M + + + A+ +++ + +K + + G
Sbjct: 301 RLFNYM--------CVCVEWVRAQIIISYKNFFHMKNVISQASKG--------------- 337
Query: 545 ERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPL 604
KLF + + +VTLTAL EMF+ ARSIMNWLG+CAK+IASEN+PVRWTTPL
Sbjct: 338 -------GIKLFELAWF--QVTLTALGEMFEAARSIMNWLGDCAKIIASENEPVRWTTPL 388
Query: 605 GLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 664
GLPVVQPYRKLG IKTSLQ+L LQ+ETDKVMV+RQRTAF PNFVHSLD SHMMMTAVA
Sbjct: 389 GLPVVQPYRKLGTRSIKTSLQVLILQKETDKVMVQRQRTAFSPNFVHSLDSSHMMMTAVA 448
Query: 665 CKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
CK AGL FAGVHDSYWTHACDVD+MNRILR KFVELYETPILENLLE F+K
Sbjct: 449 CKGAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEK 499
>N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcomitrella patens
GN=rpoTm PE=2 SV=1
Length = 1010
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/667 (55%), Positives = 485/667 (72%), Gaps = 7/667 (1%)
Query: 53 TEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYI 112
E+ +L + + K +K+ R +++ + + PWGP + KVGSRL+EL M+TA I
Sbjct: 318 VELTTSPELPTQATGMQKLRKLRLWRSMLQKASGSDPWGPTIYAKVGSRLLELFMETAVI 377
Query: 113 QPPSDQI-VDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP 171
+ PSD VD S P F H+ + + ++ FG++EC+PL+L+ +D+S K +++P
Sbjct: 378 RVPSDDPHVDAS--FEPVFQHTNKKFVCTSGRSSTGFGVVECNPLVLEQIDKSVKYVIMP 435
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHT 231
YMPM+ P +W G+ GG+LFL S +MRTHG K+Q + K P++ ++ +F+AL+ LG T
Sbjct: 436 YMPMVSKPKHWKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGET 495
Query: 232 KWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENR 291
WRVNK VL+V+++IW GGRLA+LVD +DV +P +P+T++ ++ N
Sbjct: 496 GWRVNKPVLAVLEQIWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNY 555
Query: 292 ERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFAD 351
ERYS RCD+ELKLAVARK+ +E+AFY PHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFA
Sbjct: 556 ERYSLRCDVELKLAVARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAK 615
Query: 352 GRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNA 411
GRPLG++G +WLKIHLANLY G + KLS + RV+ ++H+DD+FDSA+ P+ G RWWL A
Sbjct: 616 GRPLGETGLRWLKIHLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKA 675
Query: 412 EDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVA 471
EDPFQ LA CI + A++S +P+T+ S +PVHQDGSCNGLQHYAALGRD++GA VNL+A
Sbjct: 676 EDPFQFLAACIDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLA 735
Query: 472 GEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVT 531
G+ PADVYS IA RV + A K+P A AR L+ Q+DRKLVKQT+MTSVYGVT
Sbjct: 736 GDVPADVYSAIADRVHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVT 795
Query: 532 YIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
++GAR QI RLKER + D +LF AS YAAKVTL AL E F+ AR IMNWL ECA++I
Sbjct: 796 FVGARIQILNRLKERGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQII 855
Query: 592 ASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPN 648
A V+WTTPLGL VVQPYR RH++KT+LQ L + R D V+ RQR+AF PN
Sbjct: 856 AHSGNSVKWTTPLGLEVVQPYRNPSRHLVKTALQDLHI-RSVDVDSPVLKTRQRSAFAPN 914
Query: 649 FVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
F+HSLD +HMM+TA+A QAG++FAGVHDS+WTHA DVD +N++ R KFVELY PILEN
Sbjct: 915 FIHSLDSTHMMLTALASNQAGISFAGVHDSFWTHAGDVDVLNKLTREKFVELYSYPILEN 974
Query: 709 LLEGFQK 715
LL GFQ+
Sbjct: 975 LLLGFQR 981
>A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_222742 PE=3 SV=1
Length = 861
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/667 (55%), Positives = 484/667 (72%), Gaps = 7/667 (1%)
Query: 53 TEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYI 112
E+ +L + + K +K+ R +++ + + PWGP + KVGSRL+EL M+TA I
Sbjct: 169 VELTTSPELPTQATGMQKLRKLRLWRSMLQKASGSDPWGPTIYAKVGSRLLELFMETAVI 228
Query: 113 QPPSDQI-VDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP 171
+ PSD VD S P F H+ + ++ FG++EC+PL+L+ +D+S K +++P
Sbjct: 229 RVPSDDPHVDAS--FEPVFQHTNKKFVCTNGRSSTGFGVVECNPLVLEQIDKSVKYVIMP 286
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHT 231
YMPM+ P +W G+ GG+LFL S +MRTHG K+Q + K P++ ++ +F+AL+ LG T
Sbjct: 287 YMPMVSKPKHWKGFHDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGET 346
Query: 232 KWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENR 291
WRVNK VL+V+++IW GGRLA+LVD +DV +P +P+T++ ++ N
Sbjct: 347 GWRVNKPVLAVLEQIWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNY 406
Query: 292 ERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFAD 351
ERYS RCD+ELKLAVARK+ +E+AFY PHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFA
Sbjct: 407 ERYSLRCDVELKLAVARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAK 466
Query: 352 GRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNA 411
GRPLG++G +WLKIHLANLY G + KLS + RV+ ++H+DD+FDSA+ P+ G RWWL A
Sbjct: 467 GRPLGETGLRWLKIHLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKA 526
Query: 412 EDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVA 471
EDPFQ LA CI + A++S +P+T+ S +PVHQDGSCNGLQHYAALGRD++GA VNL+A
Sbjct: 527 EDPFQFLAACIDIRNAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLA 586
Query: 472 GEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVT 531
G+ PADVYS IA RV + A K+P A AR L+ Q+DRKLVKQT+MTSVYGVT
Sbjct: 587 GDVPADVYSAIADRVHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVT 646
Query: 532 YIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
++GAR QI RLKER + D +LF AS YAAKVTL AL E F+ AR IMNWL ECA++I
Sbjct: 647 FVGARIQILNRLKERGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQII 706
Query: 592 ASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPN 648
A V+WTTPLGL VVQPYR RH++KT+LQ L + R D V+ RQR+AF PN
Sbjct: 707 AHSGNSVKWTTPLGLEVVQPYRNPSRHLVKTALQDLHI-RSVDVDSPVLKTRQRSAFAPN 765
Query: 649 FVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
F+HSLD +HMM+TA+A QAG++FAGVHDS+WTHA DVD +N++ R KFVELY PILEN
Sbjct: 766 FIHSLDSTHMMLTALASNQAGISFAGVHDSFWTHAGDVDVLNKLTREKFVELYSYPILEN 825
Query: 709 LLEGFQK 715
LL GFQ+
Sbjct: 826 LLLGFQR 832
>I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 547
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/517 (70%), Positives = 419/517 (81%)
Query: 198 MRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV 257
MRTHG ++Q++ +K Q++ VFE LD LG+TKWRVN+++L VV+ IWA GG +A LV
Sbjct: 1 MRTHGSRKQQDVMKNVNGAQMQKVFETLDILGNTKWRVNRRMLGVVESIWAGGGNIAGLV 60
Query: 258 DRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
D DVP P++P +D I N ER+S RCD ELKL+VARKMKDEE FY
Sbjct: 61 DCKDVPKPDKPPVEDLKLIQEWKCSVRKAKKINLERHSLRCDTELKLSVARKMKDEEGFY 120
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEFA+GRPLGKSG +WLKIHLANLYAGG++K
Sbjct: 121 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 180
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
S +GR+ F E H+ DIFDSAD P+ G RWWL AEDPFQCLA CI L+EALRSSSP +FI
Sbjct: 181 HSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSSSPNSFI 240
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
SH+P+HQDGSCNGLQHYAALGRD L AAAVNLVA EKPADVY+ IA RV DIMR D+ KD
Sbjct: 241 SHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAKEKPADVYTEIAVRVYDIMRRDSNKD 300
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
P FP+AL A+ L+ Q+DRKLVKQTVMTSVYGVTYIGAREQIKRRL E+ + +DD L+
Sbjct: 301 PDTFPNALLAKVLLGQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGLITDDRLLYA 360
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR 617
ASCYAAKVTL AL E+F+ AR IM WLG+CAKVIA ENQ VRWTTPLGLPVVQPY K R
Sbjct: 361 ASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVIACENQAVRWTTPLGLPVVQPYCKTER 420
Query: 618 HIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHD 677
+ I+TSLQ+L LQRE V VK+QR+AFPPNFVHSLD SHMMMTA+AC AGL FAGVHD
Sbjct: 421 YQIRTSLQLLALQREGSAVSVKKQRSAFPPNFVHSLDSSHMMMTALACNDAGLCFAGVHD 480
Query: 678 SYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
S+WTH CDV+ MN+ILR KFVELY PILENLLEGFQ
Sbjct: 481 SFWTHPCDVEKMNQILREKFVELYNMPILENLLEGFQ 517
>M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401001383 PE=4 SV=1
Length = 672
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/472 (73%), Positives = 392/472 (83%), Gaps = 2/472 (0%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A L + +VRIHKFLE E GE AT E +KL KKV LMKKQK
Sbjct: 203 AALTIGDAIEQEVRIHKFLEKTEKHKAEKDRKMEDGEHAT--LEQKKLHKKVTSLMKKQK 260
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
+ AV I++ Q+D+KPWG + KVGSRL+E L+QTAYIQ P+DQ+ PDIRPAF+HS
Sbjct: 261 LRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHS 320
Query: 134 FRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFL 193
RTV KE K R++G+I+CD L+ KGL+R+A++MVIPYMPMLVPPV WTGYDKGGHL+L
Sbjct: 321 TRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYL 380
Query: 194 PSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRL 253
PSYVMRTHG +QQREAVKRA + QL PVFEALDTLG TKWR+NK+VLSVVDRIWA GGRL
Sbjct: 381 PSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRL 440
Query: 254 ADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDE 313
ADLVDRDD PLPEEPDT+DEA ENRER+SQRCDIELKLAVA +MKDE
Sbjct: 441 ADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDE 500
Query: 314 EAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAG 373
E F+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+LEFA GRPLG+SG +WLKIHLANL+AG
Sbjct: 501 EGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAG 560
Query: 374 GVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSP 433
GVDKLSL+GR++FTESH+DDIFDSADKPLEGRRWWLNAEDPFQCLAVCI L+EA+RSSSP
Sbjct: 561 GVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSP 620
Query: 434 ETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 485
ET ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR
Sbjct: 621 ETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 672
>M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 777
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/491 (70%), Positives = 408/491 (83%), Gaps = 4/491 (0%)
Query: 25 QVRIHKFLEXXXXXXXXXX-XXXEAGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKD 83
+VRIHKFLE E G+S KE + LRKKV DLMKKQKI VR ++K
Sbjct: 283 EVRIHKFLEKTKKKNTKEVDKVVEPGDSDI-AKEQQLLRKKVTDLMKKQKIRQVRHLVKK 341
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKK 143
Q+ T+PWG KVGSRL+EL ++TA+IQPP+ Q D +P+IRPAF H RTV +E K
Sbjct: 342 QDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQK- 400
Query: 144 TGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV 203
R++G+I+CDPL+ +GLDR+AK+MVIPYMPML+PP+NWTGYDKG HLFLPSYVMRTHG
Sbjct: 401 -SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGA 459
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
+QQREAVK+APK+Q++ +FEALD LG TKWRVNK+VLS+VDRIW+SGGRLADLVDR DV
Sbjct: 460 RQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRADVS 519
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
LPE+PDT+DEA++ EN ER+SQRCD+ELKLAVARKMK+E FYYPHN+D
Sbjct: 520 LPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYYPHNLD 579
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYPMHP+LNHLGSD+CRG+LEF++GRPLG+SG +WLKIHLANLY GGVDKLS +GR
Sbjct: 580 FRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGR 639
Query: 384 VSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
++FTE+H++DIFDSA++PLEG+RWWL AEDPFQCLAVC+ L EALRSSSPET ISHIPVH
Sbjct: 640 IAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHIPVH 699
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRDKLGA AVNLV+GEKPADVYSGIAARV++IM+ DAQKDPA D
Sbjct: 700 QDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDAD 759
Query: 504 ALHARTLVNQV 514
A AR LV+QV
Sbjct: 760 AARARLLVDQV 770
>M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011152 PE=3 SV=1
Length = 471
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/426 (76%), Positives = 368/426 (86%)
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
N+E +SQRCD ELKL+VARK+KDEE FYYPHN+DFRGRAYPMHPHLNHL SD+CRGILEF
Sbjct: 17 NQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 76
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
A+GRPLGKSG +WLK+HLA+LYAGG++KL + R++F E+H+DDI DSA PL G RWWL
Sbjct: 77 AEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWL 136
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
NAEDP QCLA CI L+EAL+S SP T ISH+P+HQDGSCNGLQHYAALGRD + AAAVNL
Sbjct: 137 NAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 196
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
VAGEKPADVY+ IA RV I+R D+ KDPA P+AL A+ L++QVDRKLVKQTVMTSVYG
Sbjct: 197 VAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYG 256
Query: 530 VTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
VTY+GAREQIKRRL+E+ + DD LF ASCYAAKVTL AL E+FQ AR M WLG+CAK
Sbjct: 257 VTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAK 316
Query: 590 VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNF 649
VIASENQPVRWTTPLGLPVVQPY K RH+I+TSLQ+L LQRE D V V++QRTAFPPNF
Sbjct: 317 VIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNF 376
Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHSLDGSHMMMTAVAC+ AGL FAGVHDS+WTHACDVD MNRILR KFVELY PILE+L
Sbjct: 377 VHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDL 436
Query: 710 LEGFQK 715
LE FQ+
Sbjct: 437 LESFQE 442
>K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 690
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/466 (68%), Positives = 382/466 (81%), Gaps = 5/466 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-----KEDEKLRKKVIDLMKKQKIAAVRG 79
+ RI++F++ E TE K+ +LRK+V LMKKQK G
Sbjct: 225 EARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMG 284
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I++ Q+D K WG + KVGSRL++LL++TAYIQPP++ I DG PDIRPAF H+ +T++
Sbjct: 285 IVRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSS 344
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
E++K R++G+IECDPL+ GL++SA++MVIPYMPMLVPP+NWTGYDKG +LFLPSYVMR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
HG KQQREAVKRAPK QL+PVFEAL+TLG TKWRVNK+VL V+D+IWA+GGRLADLVDR
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
++VP P+EPDT DEA+I EN ER+SQRCDIELKLAVARKMKDEE FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYPMHP+LNHLGSD+CRGILEF++GRPLGKSG WLKIHLANLYAGGVDKLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+GR+ FTE+H+DDIFDSAD+PLEG+RWWL AEDPFQCLA C L+EALRS +PET ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 485
+PVHQDGSCNGLQHYAALGRDKLGAAAVNLV G++PADVYSGIAAR
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAAR 690
>Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=At2g24120 PE=2 SV=1
Length = 786
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/525 (60%), Positives = 399/525 (76%), Gaps = 10/525 (1%)
Query: 14 ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
A + + +VRIH FL+ AG+S E+KE + LRK+V L+++++
Sbjct: 271 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 322
Query: 74 IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
I ++K + TKPWG + K+GSRL+ELL++ AY+QPP Q D P+ RPAF H
Sbjct: 323 IIDALKVVKSEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 381
Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
F+TVTK K R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP W GYDKGG+LF
Sbjct: 382 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 441
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
LPSY+MRTHG K+Q++A+K K VFEALDTLG+TKWRVN+ +L VV+R+WA GG
Sbjct: 442 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 501
Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+A LV+R+DVP+PE+P ++D ++ NRER+S RCD+ELKL+VARKMKD
Sbjct: 502 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 561
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG WLKIHLANLYA
Sbjct: 562 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 621
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 622 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 681
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P + ISH+P+HQDGSCNGLQHYAALGRD AAAVNLVAGEKPADVYS I+ RV +IM+
Sbjct: 682 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 741
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGARE 537
D+ KDP P A A+ L+ QVDRKLVKQTVMTSVYGVTY+GARE
Sbjct: 742 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGARE 786
>K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/445 (67%), Positives = 361/445 (81%), Gaps = 5/445 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-----KEDEKLRKKVIDLMKKQKIAAVRG 79
+ RI++F++ E TE K+ +LRK+V LMKKQK G
Sbjct: 225 EARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMG 284
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I++ Q+D K WG + KVGSRL++LL++TAYIQPP++ I DG PDIRPAF H+ +T++
Sbjct: 285 IVRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSS 344
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
E++K R++G+IECDPL+ GL++SA++MVIPYMPMLVPP+NWTGYDKG +LFLPSYVMR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
HG KQQREAVKRAPK QL+PVFEAL+TLG TKWRVNK+VL V+D+IWA+GGRLADLVDR
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
++VP P+EPDT DEA+I EN ER+SQRCDIELKLAVARKMKDEE FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYPMHP+LNHLGSD+CRGILEF++GRPLGKSG WLKIHLANLYAGGVDKLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+GR+ FTE+H+DDIFDSAD+PLEG+RWWL AEDPFQCLA C L+EALRS +PET ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGA 464
+PVHQDGSCNGLQHYAALGRDK+ A
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDKIHA 669
>K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/444 (67%), Positives = 360/444 (81%), Gaps = 5/444 (1%)
Query: 25 QVRIHKFLEXXXXXXXXXXXXXEAGESATEI-----KEDEKLRKKVIDLMKKQKIAAVRG 79
+ RI++F++ E TE K+ +LRK+V LMKKQK G
Sbjct: 225 EARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMG 284
Query: 80 IMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTK 139
I++ Q+D K WG + KVGSRL++LL++TAYIQPP++ I DG PDIRPAF H+ +T++
Sbjct: 285 IVRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSS 344
Query: 140 EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
E++K R++G+IECDPL+ GL++SA++MVIPYMPMLVPP+NWTGYDKG +LFLPSYVMR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 200 THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
HG KQQREAVKRAPK QL+PVFEAL+TLG TKWRVNK+VL V+D+IWA+GGRLADLVDR
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
++VP P+EPDT DEA+I EN ER+SQRCDIELKLAVARKMKDEE FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYPMHP+LNHLGSD+CRGILEF++GRPLGKSG WLKIHLANLYAGGVDKLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
+GR+ FTE+H+DDIFDSAD+PLEG+RWWL AEDPFQCLA C L+EALRS +PET ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 440 IPVHQDGSCNGLQHYAALGRDKLG 463
+PVHQDGSCNGLQHYAALGRDK G
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDKNG 668
>D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleria gruberi
GN=NAEGRDRAFT_81702 PE=3 SV=1
Length = 933
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 295/622 (47%), Positives = 401/622 (64%), Gaps = 29/622 (4%)
Query: 97 KVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDP- 155
++GS L++L + TA++ ++ + PAF+H R +T+ +K G++E D
Sbjct: 305 QLGSYLIQLALSTAHVP-----LISNPKETVPAFIH--RNITRNSKI----IGVVEPDDN 353
Query: 156 -LILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRA 213
L L G + A+ ++ P ++PMLVPP WT GG++ L +MRT G Q +K A
Sbjct: 354 LLHLIGREHVAQEILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSA 413
Query: 214 PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDE 273
+L + L+TL T+WR+N V V ++W SGG L +L R D LPEEP+TDD
Sbjct: 414 ---ELNDLLSGLNTLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDP 470
Query: 274 AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHP 333
NR +S RCD+ LKL VA KD FY+PHN+DFRGRAYP+ P
Sbjct: 471 EIKKKWKRTVEKIKTHNRNLHSLRCDMLLKLKVAEDFKDN-TFYFPHNIDFRGRAYPIPP 529
Query: 334 HLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDD 393
HLNHLG+D+ RG+L F G P+GK G WLKIHLANLY G DKL + RV F + ++++
Sbjct: 530 HLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFVDEYINE 587
Query: 394 IFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQH 453
I DSAD+PLEG RWWL +E+P+Q LA C+ L E LRS +PE F+SH+P+ DGSCNGLQH
Sbjct: 588 IIDSADQPLEGNRWWLKSENPWQTLAACVELAECLRSPNPEEFLSHLPIQMDGSCNGLQH 647
Query: 454 YAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQ 513
YAALGRD LGA VNL+ KP DVY G VL++++ ++D + A+ L
Sbjct: 648 YAALGRDNLGALHVNLLPTSKPMDVYVG----VLEVVKKHIERD--MKAGNKLAKLLHGN 701
Query: 514 VDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEM 573
V R +KQTVMTSVYGVT++GAREQI++RLKE+ +D +F + Y A +TL +L E+
Sbjct: 702 VYRSTIKQTVMTSVYGVTFVGAREQIQKRLKEKKEVPED-DVFACASYLASITLKSLGEV 760
Query: 574 FQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRET 633
F A++IM WL +CA +I+S + PV W TPLGLPV+QPYR I+KT +Q +TL +
Sbjct: 761 FSSAQNIMEWLNDCALLISSSDTPVSWITPLGLPVIQPYRSKRSKIVKTVMQSITLADSS 820
Query: 634 DKVMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNR 691
DK+ V RQ++AFPPN+VHSLD SHM MTA AC++ G+ FA VHDS+W +A +VD MN
Sbjct: 821 DKLPVSRTRQKSAFPPNYVHSLDSSHMFMTASACQKEGIEFAAVHDSFWCNAGNVDRMNT 880
Query: 692 ILRGKFVELYETPILENLLEGF 713
I+R +F+ L+ P+LE L F
Sbjct: 881 IIREQFINLHSQPLLEELNATF 902
>C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_83775 PE=3 SV=1
Length = 899
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/693 (45%), Positives = 418/693 (60%), Gaps = 57/693 (8%)
Query: 66 IDLMKKQKIAAVRGIMK----DQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVD 121
+++ + + VRG+ + ND+ WG V R+KVG+ LV+LL+ TA I+ P D
Sbjct: 190 VNMESLKTLTTVRGVARLARTALNDSD-WGGVTRSKVGAALVKLLLTTARIRVPGP---D 245
Query: 122 GSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA--KNMVIP--YMPMLV 177
G PAF H + K ++G+I +D A + + P YMPM+
Sbjct: 246 GELIEVPAFYHDY------VKHKAHRYGVISWHDAFFTFMDDEAMIRATLSPVRYMPMVT 299
Query: 178 PPVNWTGYDKGGHLFLPSYVMR---------------THGVKQQREAVKRAPKKQLEPVF 222
PP WT ++ GG+L S VMR HG + E RA K +PV
Sbjct: 300 PPRPWTRFNAGGYLRTESIVMRGHYTTHGPSKRQMLALHGEQSGAELDGRAAK--FQPVL 357
Query: 223 EALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTD----------- 271
+AL+ LG T WR+N+ VL V++ +WA+GG AD+ R++VP P P
Sbjct: 358 DALNVLGRTAWRINEDVLRVMEEVWATGGGRADVPPRENVPDPTWPANPYGLRRSRGQLA 417
Query: 272 -----DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRG 326
+ NRE +SQRCD +KL VA++M+DE+ Y+PHN+DFRG
Sbjct: 418 ATALPSRQDVAGFIHSLNRTKQRNRELHSQRCDFLIKLQVAKEMRDEDRIYFPHNIDFRG 477
Query: 327 RAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSF 386
RAY MH HLNHLGSD+CRG L FAD RPLG G WL I ANLYAGGVDKL ++ R +
Sbjct: 478 RAYTMHVHLNHLGSDICRGALVFADARPLGNDGLDWLYIQAANLYAGGVDKLPMDERRQW 537
Query: 387 TESHVDDIFDSADKPL--EGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
E V + SA PL +G +WL+AEDP+QCLA C + A S P ++ +PVHQ
Sbjct: 538 IEDRVHLLEQSARDPLGPDG-GFWLDAEDPWQCLACCFEIERARASGDPPAYMCRLPVHQ 596
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDA 504
DGSCNGLQHYAALGRD+ G VNL+ ++P DVY+GIA + I+ DA K+P
Sbjct: 597 DGSCNGLQHYAALGRDEAGGEQVNLMPRDRPGDVYTGIANVLKRIVAEDA-KNPEDPETQ 655
Query: 505 LHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAK 564
A L VDRKLVKQTVMTSVYGVT+IGAR+QI+ RLKER D+ + + YAA+
Sbjct: 656 ALAIALAPHVDRKLVKQTVMTSVYGVTHIGARQQIQNRLKERGAVEDENLRYKMANYAAR 715
Query: 565 VTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
TL AL +F AR +M WL ECA+V+ S+ + V WTTPLGLPVVQPYR + +I+T +
Sbjct: 716 RTLDALANLFVNARDVMAWLAECARVVCSQGRAVEWTTPLGLPVVQPYRVKSQRMIRTLV 775
Query: 625 QMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
Q TLQ + D+ V +QR+AFPPNF+HS+D +HMM TA+AC +AGL FAGVHDS+WTH
Sbjct: 776 QSFTLQFDNDENSVAKAKQRSAFPPNFIHSIDSAHMMKTALACHEAGLTFAGVHDSFWTH 835
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
A DV +M+R +R KF+EL+ P+LE L E ++
Sbjct: 836 AGDVPEMSRHIREKFIELHSEPLLEMLYEELKE 868
>Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleria sp. TES-2005
PE=3 SV=1
Length = 968
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/624 (47%), Positives = 398/624 (63%), Gaps = 29/624 (4%)
Query: 97 KVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPL 156
++GS L++L + TA + +VD + PAF+H K + G+ G+IE D
Sbjct: 340 RLGSYLIQLTLDTAKVP-----LVDNPKESVPAFIH------KNVSRAGKVIGMIEPDEN 388
Query: 157 ILK--GLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRA 213
+++ G + + ++ P ++PMLVPP WT GG++ L +MRT G Q +K A
Sbjct: 389 LIQLVGREHLTQEILFPNHLPMLVPPNPWTSSVSGGYIALKVMIMRTRGSHLQSYILKSA 448
Query: 214 PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDE 273
+L + L+TL +KW VN KV V R+W GG L +L R D LPEEP+TDD
Sbjct: 449 ---ELTDLLSGLNTLNESKWIVNPKVYETVLRVWNEGGGLGELPSRFDDALPEEPETDDP 505
Query: 274 AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHP 333
NR +S RCD+ LKL VA KD AFY+PHN+DFRGRAYP+ P
Sbjct: 506 EVKKKWKRTCEKIKQHNRNLHSLRCDMLLKLKVAEDFKDN-AFYFPHNIDFRGRAYPIPP 564
Query: 334 HLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDD 393
HLNHLG+D+ RG+L F G P+GK G WLKIHLANLY G DKL + RV F + ++ +
Sbjct: 565 HLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFIDQNMAE 622
Query: 394 IFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQH 453
+FDSAD PL+G RWWL +E+P+Q LA C+ LT LRS PE +IS++P+ DGSCNGLQH
Sbjct: 623 VFDSADVPLDGNRWWLQSENPWQTLAACVELTNCLRSEKPEEYISNLPIQMDGSCNGLQH 682
Query: 454 YAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQ 513
YAALGRD LGA VNL+ KP DVY G VL++++ ++D + A+ L
Sbjct: 683 YAALGRDNLGALHVNLLPTSKPMDVYVG----VLEVVKKHIERD--MKAGNKLAKLLHGN 736
Query: 514 VDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEM 573
V R +KQTVMTSVYGVT++GAREQI++RLKE+ +D +F + Y A +TL +L E+
Sbjct: 737 VYRSTIKQTVMTSVYGVTFVGAREQIQKRLKEKKEVPED-DVFACASYLASITLKSLGEV 795
Query: 574 FQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRET 633
F A++IM WL +CA +I+S + PV W TPLGLPV+QPYR I+KT +Q +TL +
Sbjct: 796 FSSAQNIMEWLNDCALLISSSDTPVSWITPLGLPVIQPYRSKRTKIVKTVMQSVTLFDSS 855
Query: 634 DKVMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNR 691
DK+ V RQ++AFPPN+VHSLD SHM MTA AC + G+ FA VHDS+W +A +VD MN+
Sbjct: 856 DKLPVSKTRQKSAFPPNYVHSLDSSHMFMTATACHKEGIEFAAVHDSFWCNAGNVDRMNK 915
Query: 692 ILRGKFVELYETPILENLLEGFQK 715
I+R +F+ L+ P+LE L F +
Sbjct: 916 IIREQFINLHSQPLLEELYATFTR 939
>K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoccus prasinos
GN=Bathy10g00540 PE=3 SV=1
Length = 1109
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 305/709 (43%), Positives = 427/709 (60%), Gaps = 56/709 (7%)
Query: 55 IKEDEKLRKKVIDLMKKQKIAAVRGI---MKDQNDTKPWGPVMRTKVGSRLVELLMQTAY 111
IKE + +R ++ +K+ +VR + K D WG V+ KVG+ ++ +++
Sbjct: 370 IKESD-IRSTMLQRDSTKKLKSVRAVSEQAKKALDNADWGSVLHLKVGAAIIAIVLDVCK 428
Query: 112 IQPPSDQIVDGSPDIR-PAFVHSFRTVT------KEAKKTGRKFGIIECDPLILKGLDRS 164
I+ P + + I PAF H + K+ + G + + + +
Sbjct: 429 IKVPGPETAETGEKIEVPAFYHDYSLEPNAYQGWKQKASPNNRSGTVHWHDSFFRFVHSA 488
Query: 165 ----AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK------QQREAVKRAP 214
A++ + + PM+VPP W Y+KGG+L S VMR + + Q + +R
Sbjct: 489 TLARARSAITRHKPMIVPPRPWESYNKGGYLNSNSVVMRGNYSRDGPSDGQMKLLAERV- 547
Query: 215 KKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIW-------ASGGRLADLVDRDDVPLPEE 267
+ + VF AL+ LG T W +N +L V++++W GG +A++ R ++ LP
Sbjct: 548 -GEYDNVFGALNVLGSTAWVINTDILEVIEQVWREKKYAGGFGGGIANIPPRAELNLPNW 606
Query: 268 PDTD-----------------DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKM 310
P ++ ++ NRE +SQRCD +KL VAR+M
Sbjct: 607 PSSEFRLRRERNGPLYATALPSSREVGEFMRAFNRAKQTNRELHSQRCDFAIKLQVAREM 666
Query: 311 KDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANL 370
K+EE Y+PHNVDFRGRAY MH HLNH+GSD CRG L+FAD +PLG++G WL I ANL
Sbjct: 667 KNEERIYFPHNVDFRGRAYTMHAHLNHIGSDFCRGTLKFADAKPLGENGLDWLFIQCANL 726
Query: 371 YAGGVDKLSLEGRVSFTESHVDDIFDSADKPL--EGRRWWLNAEDPFQCLAVCITLTEAL 428
Y GG DKL L RV F++ +++ I SA+ PL EG WW +A+DP+QCLA C+ + +A+
Sbjct: 727 YGGGADKLPLHQRVEFSKLNLEKIKKSAEDPLGPEG-SWWQDADDPWQCLATCMEIIKAI 785
Query: 429 RSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLD 488
S P ++ ++PVHQDGSCNGLQHYAALGRD G AVNLV ++ ADVY+GIA + D
Sbjct: 786 NSKDPAKYMCNLPVHQDGSCNGLQHYAALGRDFAGGRAVNLVPADRGADVYTGIANVLRD 845
Query: 489 IMRSDAQ----KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 544
I++ D + KD A+ L++QVDRKLVKQTVMTSVYGVT++GAR QI RLK
Sbjct: 846 IVQKDIENCDYKDEESVERMKLAKLLIDQVDRKLVKQTVMTSVYGVTFVGARMQISARLK 905
Query: 545 ERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPL 604
ER F ++ + + YAAK TL AL +MFQ AR +M WL CA V+ N PV+WTTPL
Sbjct: 906 ERVGFESESVRYRVAAYAAKRTLDALNDMFQNAREVMGWLTHCASVVTKVNAPVQWTTPL 965
Query: 605 GLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVK--RQRTAFPPNFVHSLDGSHMMMTA 662
GLPV+QPYR + ++T LQ L+ E +K V +QR+AFPPN++HS+D +HMMMTA
Sbjct: 966 GLPVLQPYRNQTQKSVRTLLQTFVLRSEDEKQKVNKSKQRSAFPPNYIHSIDSTHMMMTA 1025
Query: 663 VACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLE 711
+ C +A + FAGVHDS+WTHA DV M+RILR KF+EL+ETP+L+NL E
Sbjct: 1026 LECSRANITFAGVHDSFWTHAGDVPVMSRILREKFIELHETPLLDNLYE 1074
>Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreococcus tauri
GN=Ot09g03980 PE=3 SV=1
Length = 973
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/699 (43%), Positives = 414/699 (59%), Gaps = 66/699 (9%)
Query: 65 VIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSP 124
+D K I +V ++ + WG +R KVG+ L+ LM TA I P + +G
Sbjct: 262 TLDTSKMNTIKSVSKHARNALENAEWGREIRVKVGTVLLNALMNTAKIGVPEE---NGGV 318
Query: 125 DIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA--KNMVIP--YMPMLVPPV 180
PAF H +R +G++ I + ++ + ++P + PM+VPP
Sbjct: 319 LTLPAFYHDYRE---------GGYGMLHWHDSIYRFINTETMTRAALVPVKHFPMIVPPR 369
Query: 181 NWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLE----------------PVFEA 224
W Y+ GG+L + MR K E RA + LE PV +A
Sbjct: 370 EWVRYNNGGYLRANTLCMRG---KYSNEGPSRAQVQALEAKAREAELKNEPVLYQPVLDA 426
Query: 225 LDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTD------------- 271
L+ LG T W+VN VL +V+ +WA GG +A++ R ++ LP P
Sbjct: 427 LNALGRTPWQVNTDVLPIVEEVWARGGGIAEVPLRAELQLPRWPGGSYALRSDKNRFQLL 486
Query: 272 -----DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRG 326
+ ++ N E +SQRCD +KL VAR+MK+E Y+PHN+DFRG
Sbjct: 487 ASGLPGKGEVIEFLQSVRKTKKSNMELHSQRCDFLIKLQVAREMKNEPNIYFPHNLDFRG 546
Query: 327 RAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSF 386
RAY MH HLNH+GSD+CRG+L F++ +PLG+ G +W+ I A L+ G DKL ++ RV F
Sbjct: 547 RAYTMHVHLNHIGSDLCRGLLRFSEKKPLGERGLRWMYIQCATLFGNGADKLPMDERVQF 606
Query: 387 TESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDG 446
++ + SA PL WW +AE+P+QCLA CI L +AL P F+S++PVHQDG
Sbjct: 607 IVDQIEQVRASAQDPLAKGAWWQDAEEPWQCLATCIELDKALELEDPTQFLSNLPVHQDG 666
Query: 447 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA-------ARVLDIMRSDAQKDPA 499
SCNGLQHYAALGRD G AVNLV ++ ADVY+GIA A + ++ SD ++D A
Sbjct: 667 SCNGLQHYAALGRDLHGGEAVNLVPADRGADVYTGIANVLKRIVADDIKLIDSDNEEDVA 726
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL-FGA 558
+A A L + +DRKLVKQTVMTSVYGVT+IGAR QI RL+ER+V D+ L +
Sbjct: 727 ---NAKLAMALAHHIDRKLVKQTVMTSVYGVTFIGARAQIYSRLREREVMEDNELLRYRV 783
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 618
S YAA+ TL AL MF AR +M WL +CA + + +PVRWTTPLGLPVVQPY +
Sbjct: 784 STYAARRTLDALNNMFSNARDVMGWLTDCAAIATATGEPVRWTTPLGLPVVQPYHRKSTK 843
Query: 619 IIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVH 676
++T LQ T++ + DK VM +QR+AFPPN++HS+D SHMM TAVAC AGL FAGVH
Sbjct: 844 RVRTILQSFTIKTDDDKQPVMKVKQRSAFPPNYIHSIDSSHMMKTAVACVDAGLTFAGVH 903
Query: 677 DSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
DS+WTHACD+D MN+ILR KF+E++ P+LENL E ++
Sbjct: 904 DSFWTHACDIDTMNKILREKFIEVHSEPLLENLYEELRE 942
>Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment)
OS=Polysphondylium pallidum GN=mtRNAP PE=3 SV=1
Length = 862
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 290/631 (45%), Positives = 411/631 (65%), Gaps = 36/631 (5%)
Query: 96 TKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR---PAFVHSFRTVTKEAKKTGRKFGIIE 152
TKVGS +V+ +M + I ++ +DG DI PAF + +R +K+G+I
Sbjct: 226 TKVGSFMVKSIMDSCMI----NKYIDGE-DIDEKVPAFYYKYRY------NNNKKYGVIS 274
Query: 153 CDPLILKGLDRS---AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREA 209
C + +D + M +PM+VPP WT +KG +L P ++MRT+G K Q+ +
Sbjct: 275 CHDNVYSLMDEGHFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFIMRTNGSKLQKTS 334
Query: 210 VKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEP- 268
+ ++ L ++E L+ LG W+ N+K++S++ W GG +ADL R D LPE P
Sbjct: 335 LYQS---DLTNIYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLPSRYDFELPESPS 391
Query: 269 --DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRG 326
D DE N + +S RCD KL VA++++ E FY+PHNVDFRG
Sbjct: 392 QEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQLQ-EYTFYFPHNVDFRG 450
Query: 327 RAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSF 386
R+YP+ PHLNH+GSD CR L+FA+ + LG+ G +WLK+ +ANL+ GVDK+S E RV+F
Sbjct: 451 RSYPIPPHLNHMGSDFCRSTLKFAEEKELGERGFEWLKVQVANLF--GVDKVSFEDRVAF 508
Query: 387 TESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDG 446
T ++++I+DSAD+PL+G+RWWL A+ P+Q LA CI LT+A+RS +P TF S +P+HQDG
Sbjct: 509 TMENIENIYDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPTTFKSSLPIHQDG 568
Query: 447 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALH 506
+CNGLQHYAALG D+LGA VNL+ KP DVY+G+A V I+ D A+ D L
Sbjct: 569 TCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHED-----ALAGDEL- 622
Query: 507 ARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVT 566
A+ L +++RK++KQTVMTSVYGVT++GAR QI+ L ++ D+ LF A+ Y +K T
Sbjct: 623 AKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQI-DEATLFKATTYLSKTT 681
Query: 567 LTALEEMFQGARSIMNWLGECAKVIASEN-QPVRWTTPLGLPVVQPYRKLGRHIIKTSLQ 625
+L++MF GARSIM WL +CA +I+ + + V W TPLGLPVVQPYRK G+ +KT +
Sbjct: 682 FASLDKMFIGARSIMAWLAQCAGLISKQTGECVAWYTPLGLPVVQPYRKGGKVSVKTIMN 741
Query: 626 MLTLQRETDKVMV--KRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
+ + D + V ++QR+AFPPNF+HSLD +HM +TA+ CK+ G+ FA VHDS+WTHA
Sbjct: 742 DYLMVEDNDHLPVDSRKQRSAFPPNFIHSLDSTHMFLTAIQCKKKGITFASVHDSFWTHA 801
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGFQ 714
+D MN +LR +FVEL+ PILE L E F
Sbjct: 802 STIDTMNTMLRHQFVELHSQPILERLREWFN 832
>A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_34669 PE=3 SV=1
Length = 922
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 301/675 (44%), Positives = 406/675 (60%), Gaps = 38/675 (5%)
Query: 66 IDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPD 125
+D K I +V + + WG +R K+G+ L+ LM TA I P ++ G
Sbjct: 228 LDTSKMNTIKSVSKHARQALENAEWGREIRLKIGTVLLTALMNTAKIGVPDEK---GELL 284
Query: 126 IRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA--KNMVIP--YMPMLVPPVN 181
PAF H + KEA +G++ I + ++ + ++P + PM++PP
Sbjct: 285 TLPAFYHDY----KEAG-----YGMLHWHDSIYRFINTETMTRAALVPVRHFPMVIPPRY 335
Query: 182 WTGYDKGGHLFLPSYVMRTHGVKQ-------------QREAVKRAPKKQLEPVFEALDTL 228
W Y+KGG+L + MR + REA Q +PV +AL+ L
Sbjct: 336 WERYNKGGYLRADNLCMRGKYSNEGPSRAQIAALEEKAREADASGEPVQYQPVLDALNAL 395
Query: 229 GHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTD--DEAQIXXXXXXXXXX 286
G T W++N VL +V+ +WA GG +A++ R ++ LP P + ++
Sbjct: 396 GQTAWQINTDVLPIVEEVWARGGGVAEVPLRAELQLPRWPGGGLPGKGEVIDFLQSVRKT 455
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
N E +SQRCD +KL VAR+MK+E Y+PHN+DFRGRAY MH HLNH+GSD+CRG+
Sbjct: 456 KKSNMELHSQRCDFLIKLQVAREMKNEPNIYFPHNLDFRGRAYTMHVHLNHIGSDLCRGL 515
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
L F + +PLG+ G +W+ I A L+ G DKL ++ RV F + ++D+ SA PL
Sbjct: 516 LRFNEKKPLGERGLRWMHIQCATLFGNGADKLPMDERVQFIKDRIEDVRASAQDPLAKDA 575
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WW AE+P+QCLA CI L +AL S P F+S++PVHQDGSCNGLQHYAALGRD G A
Sbjct: 576 WWQEAEEPWQCLATCIELDKALELSDPTQFMSNLPVHQDGSCNGLQHYAALGRDLHGGEA 635
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQ----KDPAIFPDALHARTLVNQVDRKLVKQT 522
VNLV ++ ADVY+GIA + I+ D + +D +A A +L +DRKLVKQT
Sbjct: 636 VNLVPADRGADVYTGIANVLKRIVAEDIKLIDSEDEEDVNNAKLAMSLAQHIDRKLVKQT 695
Query: 523 VMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL-FGASCYAAKVTLTALEEMFQGARSIM 581
VMTSVYGVT+IGAR QI RL+ER+ D+ L + S YAAK TL AL MF AR +M
Sbjct: 696 VMTSVYGVTFIGARAQIYSRLREREAMEDNELLRYRVSNYAAKRTLDALNNMFSNARDVM 755
Query: 582 NWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVK 639
WL CA + S +PVRWTTPLGLPVVQPY ++T LQ +L+ E VM
Sbjct: 756 GWLTTCATIATSAGEPVRWTTPLGLPVVQPYHSQRTKRVRTILQSFSLKVHDEQQPVMKV 815
Query: 640 RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVE 699
+QR+AFPPN++HS+D SHMM TA+AC AGL FAGVHDS+WTHA DVD MN ILR KF+E
Sbjct: 816 KQRSAFPPNYIHSIDSSHMMRTAIACVDAGLTFAGVHDSFWTHATDVDTMNVILREKFIE 875
Query: 700 LYETPILENLLEGFQ 714
+++ P+LENL F+
Sbjct: 876 VHKEPLLENLYHEFR 890
>D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpmA PE=3 SV=1
Length = 1010
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 278/596 (46%), Positives = 393/596 (65%), Gaps = 28/596 (4%)
Query: 128 PAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS---AKNMVIPYMPMLVPPVNWTG 184
PAF + +R +K+G+I C + +D + M +PM+VPP WT
Sbjct: 270 PAFYYKYRY------NNNKKYGVISCHDNVYSLMDEGHFLVEAMNARLLPMVVPPQPWTH 323
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVD 244
+KG +L P ++MRT+G K Q+ ++ ++ L ++E L+ LG W+ N+K++S++
Sbjct: 324 PNKGCYLQYPCFIMRTNGSKLQKTSLYQS---DLTNIYEGLNVLGEVPWKTNEKMMSILL 380
Query: 245 RIWASGGRLADLVDRDDVPLPEEP---DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIE 301
W GG +ADL R D LPE P D DE N + +S RCD
Sbjct: 381 EAWEKGGGIADLPSRYDFELPESPSQEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDTL 440
Query: 302 LKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQ 361
KL VA++++ E FY+PHNVDFRGR+YP+ PHLNH+GSD CR +L+FA+ + LG+ G +
Sbjct: 441 YKLNVAKQLQ-EYTFYFPHNVDFRGRSYPIPPHLNHMGSDFCRSMLKFAEEKELGERGFE 499
Query: 362 WLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVC 421
WLK+ +ANL+ GVDK+S E RV+FT ++++I+DSAD+PL+G+RWWL A+ P+Q LA C
Sbjct: 500 WLKVQVANLF--GVDKVSFEDRVAFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAAC 557
Query: 422 ITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 481
I LT+A+RS +P TF S +P+HQDG+CNGLQHYAALG D+LGA VNL+ KP DVY+G
Sbjct: 558 IELTDAIRSGNPTTFKSSLPIHQDGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTG 617
Query: 482 IAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKR 541
+A V I+ D A+ D L A+ L +++RK++KQTVMTSVYGVT++GAR QI+
Sbjct: 618 VAQMVAQIVHED-----ALAGDEL-AKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIEN 671
Query: 542 RLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASEN-QPVRW 600
L ++ D+ LF A+ Y +K T +L++MF GARSIM WL +CA +I+ + + V W
Sbjct: 672 ALSDKYQI-DEATLFKATTYLSKTTFASLDKMFIGARSIMAWLAQCAGLISKQTGECVAW 730
Query: 601 TTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMV--KRQRTAFPPNFVHSLDGSHM 658
TPLGLPVVQPYRK G+ +KT + + + D + V ++QR+AFPPNF+HSLD +HM
Sbjct: 731 YTPLGLPVVQPYRKGGKVSVKTIMNDYLMVEDNDHLPVDSRKQRSAFPPNFIHSLDSTHM 790
Query: 659 MMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
+TA+ CK+ G+ FA VHDS+WTHA +D MN +LR +FVEL+ PILE L E F
Sbjct: 791 FLTAIQCKKKGITFASVHDSFWTHASTIDTMNTMLRHQFVELHSQPILERLREWFN 846
>Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum polycephalum
GN=rpoM PE=2 SV=1
Length = 997
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/649 (45%), Positives = 407/649 (62%), Gaps = 38/649 (5%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--------------PAFVHSFR 135
W ++G+ L++ LM +A I+ D+++ + ++ AFVH ++
Sbjct: 332 WDSKTIVQLGAFLLKHLMLSAKIEKNVDKVLSKANNLAVSSSERQLADDEYVSAFVHYYK 391
Query: 136 TVTKEAKKTGRKFGIIECDPLILKGLDRS---AKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
+ + T R+ G+++C I K +D + + +PM+V PV W GG+L+
Sbjct: 392 FYRQGS--TTRRQGLLKCHENIFKYVDDGHVIKEVLDARLLPMVVKPVPWVSPTVGGYLY 449
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
+PS +MR + Q ++ A L VF AL+ LG T WRVN++V +V ++W GG
Sbjct: 450 VPSVLMRAQEHQAQYASLWNA---DLTTVFAALNALGETGWRVNEEVYHIVKKVWDDGGG 506
Query: 253 LADLVDRDDVPLPEEPD---TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK 309
LA L R D+ P+ PD T+DE++ N + S RCD KL+VA
Sbjct: 507 LAALPTRTDITFPDPPDDLDTNDESKRTWKKTERKIRQLNN-DLNSLRCDTTYKLSVAET 565
Query: 310 MKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLAN 369
+ + FY PHNVDFRGRAYP+ PHLN LGSD+CRG+L F + +PLG +G +WLKIHLAN
Sbjct: 566 LLHMD-FYLPHNVDFRGRAYPIPPHLNQLGSDMCRGLLVFKEKKPLGPTGLRWLKIHLAN 624
Query: 370 LYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALR 429
LY GVDK+ + RV+F + ++D +FDSAD PL+G +WW+ A+DP+QCL C L +ALR
Sbjct: 625 LY--GVDKVPFDARVNFVDKNIDKVFDSADHPLDGEQWWVGADDPWQCLGTCFELAKALR 682
Query: 430 SSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDI 489
S +PE F+S +PVHQDGSCNGLQHYAALG D++G VNLV + P DVYSG+A V
Sbjct: 683 SPNPEEFLSCMPVHQDGSCNGLQHYAALGGDEIGGRKVNLVPSDAPQDVYSGVATVVAKR 742
Query: 490 MRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDV- 548
+ DA + + L ++DRK+VKQTVMTSVYGVTYIGAR QI L ++D+
Sbjct: 743 VHEDAIAGHEL------GKLLDGKLDRKVVKQTVMTSVYGVTYIGARLQIHNALSDKDIE 796
Query: 549 FSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPV 608
+ DD +L+ AS Y T AL +MF GAR+IM WL +CA++IA PV W TPLGLP+
Sbjct: 797 WRDDDQLYHASAYITNHTFEALNQMFLGARNIMKWLADCARIIAKNKDPVAWVTPLGLPI 856
Query: 609 VQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 666
VQPY K + ++KT +Q +L+ R+ V +QR+AFPPN+VHSLD HMM+TA+ C+
Sbjct: 857 VQPYVKNQQFLVKTVVQKVLLSDPRKDLPVNTIKQRSAFPPNYVHSLDSCHMMLTAIECQ 916
Query: 667 QAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
+ G+++ VHDSYWTHAC VD MN ILR +FVEL+ P+L L E F K
Sbjct: 917 KKGISYTSVHDSYWTHACTVDQMNVILRDQFVELHSQPLLHRLREWFIK 965
>L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_101460 PE=3 SV=1
Length = 965
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 297/684 (43%), Positives = 418/684 (61%), Gaps = 52/684 (7%)
Query: 60 KLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYI------- 112
+LR + K+Q + +R + Q + WG + K+GS LV+ L+ TA I
Sbjct: 277 QLRNRSATPTKQQICSLIRTQSRAQFEDASWGAALHAKIGSLLVQQLLGTATIARKAEEA 336
Query: 113 -----QPPSDQIVDGSPDIRPAFVHSFRTVTK------EAKKTGRKFGIIECDPLILKGL 161
Q +++ G+P RPAFV + + +A G+ G + C +L +
Sbjct: 337 DVAAAQSSPARLLSGAPRKRPAFVTKEEALLEPAFNHHQAMLRGKLTGFLGCHEQVLALM 396
Query: 162 DRSAKN---MVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQL 218
+ M YMPMLV P W ++GG+L + V+R G + Q E ++ A +
Sbjct: 397 EHEEVQRGVMQARYMPMLVEPQPWVAPNQGGYLVARTQVLRAKGSRMQTEVLRSA---SM 453
Query: 219 EPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEP-DTDDEAQIX 277
+ V+E L+ L T WR+N ++ V+ W +GG +ADL R ++P E P D + ++
Sbjct: 454 DKVYECLNLLSSTPWRINNRMHEVICEAWDNGGGIADLPSRTNLPELEPPADYYSDLEVK 513
Query: 278 XXX-XXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLN 336
N +S RCD VA++ +D FYYPHN+DFRGR YP+ PHLN
Sbjct: 514 QKFDRERKKAKIANYNLHSLRCD------VAKECQDR-TFYYPHNMDFRGRTYPIPPHLN 566
Query: 337 HLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFD 396
HLG D+CRG+L FA+G+PLG+ LK+HLAN++ G DK++ E RV F E++++ I D
Sbjct: 567 HLGQDLCRGLLTFAEGKPLGE-----LKVHLANVF--GNDKITFEDRVRFVENNMEHIMD 619
Query: 397 SADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAA 456
SA PL G+RWWL A+ P+QCLA I L A S PET++S +P+HQDGSCNGLQHYAA
Sbjct: 620 SASNPLGGQRWWLKADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAA 679
Query: 457 LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDR 516
LG D++GA VNL+ E+P DVYSG+ V+ + DA I A+ L+ +VDR
Sbjct: 680 LGGDEMGARQVNLLPSERPQDVYSGVVELVVRRLEDDAANGVEI------AQRLLGKVDR 733
Query: 517 KLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQG 576
K++KQTVMTSVYGVT+IGAR+QI+ LK++ SDD +F AS Y A T ++++EMF G
Sbjct: 734 KVIKQTVMTSVYGVTFIGARQQIENALKDKGKVSDD-DMFLASRYLATSTFSSIKEMFSG 792
Query: 577 ARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR--HIIKTSLQMLTLQRETD 634
AR IM WL +CA +IA + +PV W TP+GLPVVQPYR G+ + T+LQ + L +E +
Sbjct: 793 AREIMTWLSDCATLIAKQGKPVTWVTPMGLPVVQPYRTKGKQTQTVVTALQNVMLVKEEN 852
Query: 635 K---VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNR 691
V ++QRTAFPPN+VHSLD +HMM+TA+ C +AGL +A VHDSYWTHA VD MN
Sbjct: 853 DSLPVNTRKQRTAFPPNYVHSLDSTHMMLTALQCHEAGLTYASVHDSYWTHASSVDTMNH 912
Query: 692 ILRGKFVELYETPILENLLEGFQK 715
ILR FV+L+ P+L++LL F++
Sbjct: 913 ILRRTFVDLHSQPLLDDLLAHFKR 936
>A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) OS=Chrysanthemum
morifolium GN=NEP PE=3 SV=1
Length = 383
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/406 (65%), Positives = 316/406 (77%), Gaps = 24/406 (5%)
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVD 244
YD GGH FLPSY+MRTHG +QQ++AV+ AP Q++ ++EALDTLG TKWRVNK++L+VV+
Sbjct: 1 YDCGGHFFLPSYLMRTHGSRQQQDAVEDAPPSQMQKIYEALDTLGSTKWRVNKRLLNVVE 60
Query: 245 RIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKL 304
IWA+GG +A LV+R DV +P+ +++D ++I N+E +SQRCDIELKL
Sbjct: 61 SIWAAGGDIAGLVNRQDVSIPD-LNSEDSSEIKEWRWSVRKAKKMNQELHSQRCDIELKL 119
Query: 305 AV-ARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWL 363
+V AR+MKDEE FYYPHN+DFRGRAYPMHPHLNHL SD+CRGILEFA+GRPLGKSG +WL
Sbjct: 120 SVVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWL 179
Query: 364 KIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIT 423
+IHLANLY GV+KLS +GR++F ESH+ +I DSAD PL G RWWL AEDPFQCLA CI
Sbjct: 180 RIHLANLYGSGVEKLSYDGRLAFVESHISEIIDSADNPLGGNRWWLTAEDPFQCLAACIN 239
Query: 424 LTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 483
L E L+SSSP T ISH+PVHQDGSCNGLQHYAALGRD + AAAVNLVAGEKPADVYS IA
Sbjct: 240 LAETLKSSSPHTVISHLPVHQDGSCNGLQHYAALGRDTVEAAAVNLVAGEKPADVYSEIA 299
Query: 484 ARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL 543
R DI+ QV+RKLVKQTVMTSVYGVT++GAREQIKRRL
Sbjct: 300 TRYADII----------------------QVNRKLVKQTVMTSVYGVTFVGAREQIKRRL 337
Query: 544 KERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
+E+ SDD LF ASCYAA+VTL AL E+F+ AR M WLG+CAK
Sbjct: 338 QEKGHISDDQLLFSASCYAARVTLEALGEIFEAARGTMCWLGDCAK 383
>C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromonas pusilla
(strain CCMP1545) GN=MICPUCDRAFT_17826 PE=3 SV=1
Length = 838
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/667 (43%), Positives = 415/667 (62%), Gaps = 43/667 (6%)
Query: 73 KIAAVRGIMK----DQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRP 128
K+ VR + K ND+ WG R K+GS L +LL++TA I+ P + G +I+P
Sbjct: 152 KLTTVRSVAKFARRALNDSD-WGMTARVKLGSVLAKLLVETAKIEVPDPE--SGELEIKP 208
Query: 129 AFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLD----RSAKNMVIPYMPMLVPPVNWTG 184
AF H + V ++ +++G++ P ++ R A+ ++ YMPM+ PP W+
Sbjct: 209 AFEHHYEYVNRQ-----QRYGMVSWHPAFFDYIEHEDMRHAQMSLVRYMPMVTPPRPWSR 263
Query: 185 YDKGGHLFLPSYVMRTHGVK-------------QQREAVKRAPKKQLEPVFEALDTLGHT 231
+D+GG+L ++VMR + + +Q+ + +PV +AL+ LG T
Sbjct: 264 FDQGGYLCSETFVMRGNYTRLGPSWGQIMALLGEQKRSDSDGECASYQPVLDALNVLGKT 323
Query: 232 KWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENR 291
W VN++ + V+ ++W GG +A + R V P PD + ENR
Sbjct: 324 PWVVNERTVDVMQKVWDDGGGIAGVPPRRTVDEPVWPDPGEYVN------AKVRVKRENR 377
Query: 292 ERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFAD 351
E +SQRCD +KL VA++M+DEE ++PHN+DFRGRAY MH HLNH+GSDVCRG L F +
Sbjct: 378 ELHSQRCDFLIKLKVAQEMRDEEKIFFPHNIDFRGRAYTMHAHLNHIGSDVCRGALLFQE 437
Query: 352 GRPLGKSGRQWLKIHLANLYA-GGVDKLSLEGRVSFTESHVDDIFDSADKPL----EGRR 406
RPLG++G WL + ANLYA GGVDKL L+ R + ++ +D I SA PL
Sbjct: 438 ARPLGENGLDWLYVQAANLYAAGGVDKLPLDERREWMKTRLDRIKASARDPLCADDANCA 497
Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
+WL AE+P+QCLA I + A+ S P ++ +PVHQDGSCNGLQHYAALGRD G
Sbjct: 498 FWLEAENPWQCLATFIEIAAAVDSGDPASYACRLPVHQDGSCNGLQHYAALGRDIGGGEQ 557
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNL + P DVY+G+A VL M ++ D + A A L +DRKLVKQTVMTS
Sbjct: 558 VNLTPRDSPGDVYTGVA-NVLKRMVAEDAADASDPETAATAAALAPHIDRKLVKQTVMTS 616
Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
VYGVT++GAR+QI+ RL+ER D++ + + YA++ TL AL +F AR +M+WLGE
Sbjct: 617 VYGVTHVGARQQIQSRLRERGAIEDESLRYRTANYASRRTLDALSNLFVNAREVMSWLGE 676
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD--KVMVKRQRTA 644
CA+V++ +PV+WTTP+GLPVVQPY+ R +++T +Q LQ +++ + ++Q++A
Sbjct: 677 CARVVSKGGKPVQWTTPMGLPVVQPYKAPSRKVVRTIVQSFVLQYDSEGSAIQKQKQKSA 736
Query: 645 FPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETP 704
FPPNF+HS+D +HMM TA+AC++ +AFAGVHDS+WTHA DVD MN ++R FVEL+ P
Sbjct: 737 FPPNFIHSVDSAHMMKTALACQRRDIAFAGVHDSFWTHARDVDAMNEVIRDTFVELHSEP 796
Query: 705 ILENLLE 711
++ L E
Sbjct: 797 LMTTLYE 803
>E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorella variabilis
GN=CHLNCDRAFT_27382 PE=3 SV=1
Length = 599
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/563 (49%), Positives = 361/563 (64%), Gaps = 20/563 (3%)
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQ-------LEPVFEA 224
Y+PML+PPV W + GGHL L + VMR G + Q+E + A ++ L V++A
Sbjct: 9 YLPMLIPPVPWLRNNLGGHLTLRNTVMRIRGSRLQQEMLDAADQEWGEGRGPGLSRVYDA 68
Query: 225 LDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEE----------PDTDDEA 274
L++LG T W +N+ V VV+ +WA GG + D+ + ++PLP + +
Sbjct: 69 LNSLGSTAWAINQDVFRVVETVWAWGGGVCDIPPKVNLPLPRDLKPGFRQHRHAPGQLQF 128
Query: 275 QIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPH 334
+ +NRE +S RCD+E KLA+AR+ E FY+PHNVDFRGRAYPMHPH
Sbjct: 129 YLRTRRADISRMQKKNRELHSLRCDMEYKLAIAREFVKEPRFYFPHNVDFRGRAYPMHPH 188
Query: 335 LNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDI 394
LNHLG+D+ RG+L+FA+GRPLG+ G WL + ANL+ GVDKL L GRV + E H+ I
Sbjct: 189 LNHLGADLSRGLLQFAEGRPLGEHGLFWLYVQAANLWGQGVDKLPLWGRVKWVEDHLAQI 248
Query: 395 FDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHY 454
+ +W AE+PFQ L+ C + +A S P F+SH+PVHQDGSCNGLQHY
Sbjct: 249 LMTTRGSHGQVAYWWQAENPFQFLSTCFEIHKANASGDPARFVSHVPVHQDGSCNGLQHY 308
Query: 455 AALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQV 514
AALGRD G AVNL ++P R D A P+ PD L TL +
Sbjct: 309 AALGRDFSGGHAVNLCPTDRPQAGGGARKPRTPDRACIHASNQPSNQPDLLMCHTLCAGL 368
Query: 515 DRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMF 574
DRKLVKQTVMTSVYGVT++GAR Q+ RLKER F D+ ++ SCY AKVTL L EMF
Sbjct: 369 DRKLVKQTVMTSVYGVTFVGARAQVGNRLKERG-FEDNQFMYKVSCYTAKVTLECLHEMF 427
Query: 575 QGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD 634
Q A+ M+WL ECA++IA E V W TPLGLPVVQPYR+ R ++T LQ L L D
Sbjct: 428 QSAKHTMHWLSECARLIAKEGHSVMWHTPLGLPVVQPYRRKDRQHVRTLLQRLVLVENND 487
Query: 635 K--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRI 692
+M +RQRTAFPPN++HS+D SHMM+TA+AC+Q G+ FAGVHDS+WTHA V+ MN +
Sbjct: 488 DLPIMKQRQRTAFPPNYIHSIDSSHMMLTAIACQQEGIDFAGVHDSFWTHAGTVERMNEL 547
Query: 693 LRGKFVELYETPILENLLEGFQK 715
LR KF+EL++ P+LE LLE F++
Sbjct: 548 LREKFIELHQQPLLEQLLEEFKR 570
>F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyostelium fasciculatum
(strain SH3) GN=rpmA PE=3 SV=1
Length = 1078
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/630 (44%), Positives = 388/630 (61%), Gaps = 31/630 (4%)
Query: 94 MRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIEC 153
M ++G+ ++ +M++ +I QI DG + PAF +R V G + +
Sbjct: 443 MAFRIGTFILRCIMESCFIN--KYQINDGESEQVPAFYIDYRFVR------GVRVSSLHL 494
Query: 154 D----PLILKGLD-RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQRE 208
LI G D R N + +PM+V P W + G +L P+++MRT+G K Q
Sbjct: 495 HQNVLSLIQDGHDLREVANARL--LPMVVTPEPWDSPNNGCYLHYPTFIMRTNGSKLQTS 552
Query: 209 AVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEP 268
++ A L ++E L+ LG W +N+ VL ++ W SGG + DL R D LP
Sbjct: 553 SIISA---DLSKIYEGLNILGEVPWNINRPVLDIILAAWESGGGIGDLPSRFDYELPLAA 609
Query: 269 DTDDEAQIXXXXXXXXXXXXE-NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGR 327
+ + A+ + N + +S RCD+ KL V ++++ E FY+PHNVDFRGR
Sbjct: 610 EYSESAEQRKKHAKLVKKVKQLNHDLHSLRCDLSYKLDVGKQLR-EHDFYFPHNVDFRGR 668
Query: 328 AYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFT 387
+YP+ PHLNHLGSD CR +L FA+ +PLG G WLK+HLANL GVDK+S + R++F
Sbjct: 669 SYPIPPHLNHLGSDFCRAMLTFAEKKPLGARGLMWLKVHLANL--SGVDKVSFDDRIAFV 726
Query: 388 ESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGS 447
+SH+ D++DSAD PL G RWWL A+ P+Q LA CI L A+RS P F+S +P+HQDGS
Sbjct: 727 DSHMADVYDSADNPLNGARWWLAADKPWQALATCIELANAVRSGDPANFMSSLPLHQDGS 786
Query: 448 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHA 507
CNGLQHYAALG D+ GA VNL+ KP DVYSG+A V + DA + A
Sbjct: 787 CNGLQHYAALGGDEFGAFKVNLLPSPKPQDVYSGVAQLVSATVEHDAANGHEV------A 840
Query: 508 RTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTL 567
+ L+ +V RK++KQTVMTSVYGVTYIGAR QI+ L+E+ DD +F AS Y AK T
Sbjct: 841 KALLGKVQRKIIKQTVMTSVYGVTYIGARAQIQNALEEKYQMDDDF-VFQASSYLAKETF 899
Query: 568 TALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQML 627
+L++MF GARSIM WL +CA IA + V W TPLGLPVVQPYRK G+ IKT
Sbjct: 900 KSLDKMFLGARSIMAWLSQCASAIAKSGECVAWYTPLGLPVVQPYRKGGKFSIKTIANEF 959
Query: 628 TLQRETDKVMV--KRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACD 685
L + + + V ++QR+AFPPN++HSLD +HM +TA+ +A + FA VHDS+WTHA
Sbjct: 960 VLVDDEEHLPVCSRQQRSAFPPNYIHSLDSTHMFLTAIEASRANITFASVHDSFWTHAAT 1019
Query: 686 VDDMNRILRGKFVELYETPILENLLEGFQK 715
DD+N I+R +FVEL++ P+L +L F K
Sbjct: 1020 TDDLNSIIREQFVELHQRPLLHDLHTWFTK 1049
>F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_95344 PE=3 SV=1
Length = 862
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 287/642 (44%), Positives = 400/642 (62%), Gaps = 44/642 (6%)
Query: 91 GPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGI 150
P + K+G+ + +++ I+ D D + + PAF+ R K+ R F +
Sbjct: 217 NPSVMEKIGNFFINGILENCKIRESLD---DENSPLVPAFISEARY-----SKSVRTF-V 267
Query: 151 IECDPLILKGLD-----RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQ 205
I + K ++ R A + PM++ P+ W +G +L ++R +G K
Sbjct: 268 INAHENVYKLINDGHSAREAGGARL--YPMVIKPLPWISPFEGPYLHYKVPILRANGNKS 325
Query: 206 QREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VDRDDV 262
Q + K L ++ AL+ LG+T W +NKK +++ W +GG +AD+ ++ +
Sbjct: 326 Q---ITSLLKSDLSQIYRALNVLGNTPWVINKKAYDIINEAWEAGGDIADMPRKINYEYP 382
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
PLPE+ T ++ N++ +S R D + KL VA K D Y+PHN+
Sbjct: 383 PLPEDVLTSLSSRKKHFLLEKKISKL-NKDLHSLRSDCKYKLEVAEKFLDH-TIYFPHNL 440
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGR+YP+ PHLNHLGSD+CR +L+F +PLGK G WLKI ++NLY GVDK+S
Sbjct: 441 DFRGRSYPIPPHLNHLGSDLCRSLLKFEKSKPLGKRGLDWLKIQISNLY--GVDKVSHAD 498
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
R+ FT ++++I DSAD PL+G+RWWLNA+ P+Q LA CI LTEALRS +PE F S++P+
Sbjct: 499 RIKFTTENIENIMDSADNPLKGKRWWLNADYPWQALAACIELTEALRSPNPEEFCSNLPI 558
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP--AI 500
HQDG+CNGLQHYAALG D+LGA VNL+ +KP DVY+G+A V +I+ +A++ AI
Sbjct: 559 HQDGTCNGLQHYAALGGDELGAIKVNLIPSDKPQDVYTGVAGLVAEIVEKEAEEGNKFAI 618
Query: 501 FPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER------DVFSDDTK 554
F ++DRKLVKQTVMTSVYGVTYIGAREQI LKE+ + DD
Sbjct: 619 F--------FRGRIDRKLVKQTVMTSVYGVTYIGAREQIHSSLKEKLDEETNPLEIDDEF 670
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRK 614
+F AS Y K T AL MF GARSIM WL ECA +IA PV W TPLGLPVVQPYRK
Sbjct: 671 MFSASSYITKHTFRALNNMFFGARSIMAWLSECAVLIAKSGHPVNWITPLGLPVVQPYRK 730
Query: 615 LGRHIIKTSLQMLTLQRETDKVMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
++ +K L +TDK+ V +Q++AFPPNF+HSLD +HM +TA+AC AG+ +
Sbjct: 731 TSKNSVKILEGEFLLINDTDKLQVNTLKQKSAFPPNFIHSLDSTHMFLTALACDDAGITY 790
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
+ VHDS+WTHACDVD MN ++R +F+EL++ P+L+ LLE F+
Sbjct: 791 SSVHDSFWTHACDVDKMNVLIRDQFIELHQQPLLQRLLEWFK 832
>I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_14577 PE=3 SV=1
Length = 1239
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/739 (40%), Positives = 422/739 (57%), Gaps = 87/739 (11%)
Query: 47 EAGESATEIKEDEKLRKKVIDLMKKQKI------AAVRGIMKDQNDTKPWGPV----MRT 96
E +A ++K+ K ++ + +++ ++ A + I+ + ++ W PV R
Sbjct: 389 EMEHNAVQMKKHAKSQQNIQNVLSSGRLFNMAVNKAHKKIVNNDENSAEWNPVWPTTTRA 448
Query: 97 KVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--PAFVHSFRTVTKEAKKTGRKFGIIECD 154
KVGS L LL++ A I PS G + PAF H+++ V G++ GII+
Sbjct: 449 KVGSVLTSLLLEAAKIPVPSRDPETGKKIVENIPAFFHTYQYVL------GKRVGIIKFA 502
Query: 155 PLILKGLDRSA-KNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKR 212
+ + L R ++ + P +PMLVPP W Y+ GG+L S MR +Q + +
Sbjct: 503 DQLTEMLSREPIRDTLHPRLLPMLVPPRPWLSYNSGGYLQTKSVCMRIKDSAEQLIYLHK 562
Query: 213 APKKQL-EPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL--VDRDDVPLPEEPD 269
A ++ L + V LD LG T+W+VNK V ++ W G +AD+ PLP +P+
Sbjct: 563 ASERDLLQDVLAGLDVLGSTRWKVNKNVFKIILEAWNKGEAIADIPPAVNGPTPLPPKPE 622
Query: 270 ---TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRG 326
TD +A+ E + +S RCD+ K+ AR + Y+PHN+DFRG
Sbjct: 623 NYHTDPKAKFNWVNEVKQIQTTE-KNNHSLRCDVNYKVETARAFLNL-PMYFPHNMDFRG 680
Query: 327 RAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSF 386
RAYPM P LNHLG+D+CRG+L F + +PLG+ G +WLKIHLANLY G DK S R F
Sbjct: 681 RAYPMPPTLNHLGNDLCRGLLHFEEAKPLGEKGWRWLKIHLANLY--GYDKHSFTEREQF 738
Query: 387 TESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDG 446
T ++D+I D+ D PL G++WWL A+ P+QCLA C + EA+RS PE F S +PVHQDG
Sbjct: 739 TLDNIDNIIDAVDNPLTGKQWWLKADSPWQCLAACFEVAEAVRSGKPEEFKSRLPVHQDG 798
Query: 447 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALH 506
+CNGLQHYAALG D GA AVNL AG++PADVY+G+A V + A++ +
Sbjct: 799 TCNGLQHYAALGGDLAGARAVNLAAGDRPADVYTGVADMVNKYIDKAAEEGNE------Y 852
Query: 507 ARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVT 566
A+ L V RK+VKQTVMT+VYGVT++GAR QI+ RLKE D K++ S Y AK
Sbjct: 853 AKILQGNVSRKVVKQTVMTNVYGVTFVGARAQIENRLKENPDIPRD-KVYALSSYLAKAV 911
Query: 567 LTALEEMFQGARSIMNWLGECAKVIA---------------------------------- 592
++L EMF GAR I +WL + A+ IA
Sbjct: 912 FSSLGEMFNGARQIQDWLTDSARRIARSVPLETLEESGVVKHNSGSIEDAKKSKAKAKES 971
Query: 593 --------------SENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKV 636
S+ V WTTPLGLP+VQPYR+ G+ + T LQ + ++ + V
Sbjct: 972 KKKKQVFSARNPSSSQMTSVIWTTPLGLPIVQPYRRSGKRQVATLLQTIYIEDPDASRPV 1031
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
+Q TAFPPNF+HSLD +HM+M+AVAC + G+ FA VHDSYWTHACDVD MN ++R +
Sbjct: 1032 NALKQSTAFPPNFIHSLDATHMLMSAVACHKRGMTFASVHDSYWTHACDVDSMNEVIREQ 1091
Query: 697 FVELYETPILENLLEGFQK 715
F+EL+ PI+ENLL+ FQ+
Sbjct: 1092 FIELHSQPIMENLLQEFQE 1110
>F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococcus
anophagefferens GN=AURANDRAFT_20280 PE=3 SV=1
Length = 902
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 299/651 (45%), Positives = 388/651 (59%), Gaps = 43/651 (6%)
Query: 83 DQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
++ D W + R K+GS LV L+ A GSP + V+S
Sbjct: 246 EEGDDTDWPTITRAKLGSALVMALLDVAKDDA-------GSPLLEHTIVYS--------- 289
Query: 143 KTGRKFGIIECDPLILKG--LDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
RK GII +L + + +P ++PMLV P W YD+GG L L + MR
Sbjct: 290 -NARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMR 348
Query: 200 THGVKQQREAVKRAPKKQLEP-VFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
THG Q EA + A + +E V LD +G W VN V +V WASGG+ DL
Sbjct: 349 THGCALQMEAFRNA--RGIEGGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPS 406
Query: 259 RDDVPLPE---------EPDTDDEAQ---IXXXXXXXXXXXXENRERYSQRCDIELKLAV 306
++D+ LPE D D++ N E +S RCD LKL++
Sbjct: 407 QEDLALPEPMDLAEALARADGDEDGGKKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSI 466
Query: 307 ARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIH 366
A + KDE AFY+P+NVDFRGRAYP+ P+LNHLGSDVCR +L FA+ + LG G WL+IH
Sbjct: 467 AEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIH 526
Query: 367 LANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTE 426
LANL+ G+ K SL+ R +F +H DI D+ ++P++G WWL A++P+Q LA C L
Sbjct: 527 LANLF--GLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELAR 584
Query: 427 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 486
A P + +PVH DGSCNGLQHYAALGRD G VNL+ GE P DVY G+ A V
Sbjct: 585 AAELDDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVNLLPGEAPRDVYEGVRALV 644
Query: 487 LDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER 546
+ + A D A+ L A+ + + RK+VKQTVMTSVYGVT++GAR+QI RL +
Sbjct: 645 AEKVARAATGDEALETVRL-AQIVDGLITRKVVKQTVMTSVYGVTFVGARQQILGRLTDA 703
Query: 547 -DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLG 605
DV D+ +L+ +CY A++TL LEE+F AR IM WL +CA++++ QPV W TPLG
Sbjct: 704 GDV--DEAELYLCACYVARLTLEVLEELFTSARHIMGWLAQCARLVSLHGQPVSWITPLG 761
Query: 606 LPVVQPYRKLGRHIIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAV 663
LPVVQPYR+ G+H +KT Q + L +DK V V RQ++AFPPNFVHSLD SHM+MTAV
Sbjct: 762 LPVVQPYRRDGQHAVKTLAQTVLLVDNSDKLPVSVTRQKSAFPPNFVHSLDSSHMLMTAV 821
Query: 664 ACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
GLAF VHDSYWTHA DV MN LR F+ELYE P+LE LLE F+
Sbjct: 822 EMDHRGLAFTAVHDSYWTHAADVATMNSTLRHCFLELYEAPLLEKLLESFE 872
>M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_02746 PE=4 SV=1
Length = 1259
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/659 (43%), Positives = 394/659 (59%), Gaps = 38/659 (5%)
Query: 79 GIMKDQNDTK-----PWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
+ K QN+ W ++ K+GS LV +LM A I ++ + PAF H+
Sbjct: 478 ALYKTQNNVNFEIYPKWPVTVKAKIGSILVSILMHVAKIDVITETENENISQKTPAFYHT 537
Query: 134 FRTVTKEAKKTGRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGYDKGGHL 191
++ + GRK G+I+ + ++K L + + + P +PMLV P W +D GG+
Sbjct: 538 YQY------QKGRKLGVIKLNDQLMKQLGSQPLRGNIHPRLLPMLVEPKPWISWDSGGYY 591
Query: 192 FLPSYVMRTHGVKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
S VMR+ +Q +K A ++ L+ +FE LD LG T W +N+ V VV +W SG
Sbjct: 592 LSKSIVMRSRDSPEQINYLKTASERNNLKSIFEGLDVLGSTAWAINRPVFDVVSEVWNSG 651
Query: 251 GRLADLVD-RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK 309
A++ D+ P +P + D + + + + S RCDI KL +AR
Sbjct: 652 QEFAEIPPVNSDITFPPQPTSKDPGERISWQVLCKQIARDAQNKQSIRCDINYKLEIARA 711
Query: 310 MKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLAN 369
E+ Y+PHN+DFRGRAYP+ PH NHLG+D+CRG+L F + + +G+SG +WLKIHLAN
Sbjct: 712 FLHEK-MYFPHNLDFRGRAYPIPPHFNHLGNDLCRGLLTFHEAKEIGESGLRWLKIHLAN 770
Query: 370 LYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALR 429
+ G DK S R +FT ++ +IFDSAD PL+G RWWL +DP+Q LA C LT ALR
Sbjct: 771 V--CGFDKESFIEREAFTTENLKNIFDSADNPLKGSRWWLTFDDPWQTLAACFELTAALR 828
Query: 430 SSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDI 489
S P F S +PVHQDG+CNGLQHYAALG D LGA VNL +P DVY+ +A V +
Sbjct: 829 SPDPYKFKSRLPVHQDGTCNGLQHYAALGGDILGARQVNLEPSNRPYDVYTKVAELVNEQ 888
Query: 490 MRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVF 549
++ DA++ + A L ++ RK+VKQTVMT+VYGVTY+GAR QI +LK +
Sbjct: 889 LQKDAKEGNHL------AVLLQGKITRKIVKQTVMTNVYGVTYVGARNQILNQLKNINDL 942
Query: 550 SDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ-----------PV 598
+ LF + Y AK +L+ MF GA I WL E AK I+ V
Sbjct: 943 PREM-LFNLASYLAKTVFFSLKSMFTGAHKIQEWLNEAAKRISKSINTSLSDDINLMTSV 1001
Query: 599 RWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 656
WT+PL LP+VQPYRKL R IKT+LQ +T + V ++Q+TAFPPNF+HSLD +
Sbjct: 1002 IWTSPLNLPIVQPYRKLSRKQIKTNLQSIFITDPNNINPVDTRKQQTAFPPNFIHSLDAT 1061
Query: 657 HMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
HM+M+AV+CK AGL FA VHDSYWTHA D+D+MN ILR FV+L++ I+ENLL F++
Sbjct: 1062 HMLMSAVSCKNAGLTFASVHDSYWTHAADIDNMNVILRETFVKLHKENIMENLLNEFRE 1120
>J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_03513 PE=3 SV=1
Length = 1321
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/675 (42%), Positives = 413/675 (61%), Gaps = 65/675 (9%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T PW +++ +G+ LVE L++TA + + G + +PAF HSF V
Sbjct: 552 TPPWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFEYVR------ 605
Query: 145 GRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
GRK G+I+ +P++ K L + S + ++ P ++PMLVPP +W +++G +L +P+ +MR
Sbjct: 606 GRKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNSWKAWNQGPYLTIPTTMMRFKD 665
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VD 258
+Q+ ++ A K LEPVF LD L T WR+N+ V VV + W G +AD+ +
Sbjct: 666 SVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAE 725
Query: 259 RDDVPLPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
+ ++ +PE+PD +D + + R+ +++RC L +AR ++ FY
Sbjct: 726 KCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYIND-VFY 784
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLANLY G DK
Sbjct: 785 IPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY--GYDK 842
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
S + RV F++ HV+DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS P F
Sbjct: 843 ASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDPSKFE 902
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
S +PVHQDG+CNG+QHYAALG D GA AVNL G++PAD+YS + A V + + +D +K
Sbjct: 903 SSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEADQKKG 962
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKLF 556
P AL + N + RK+VKQTVMT+VYGVT++GAR+QI ++L+ R D+ SDD ++
Sbjct: 963 ---VPTAL---LIKNPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSDD--VW 1014
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI--------------ASENQP----- 597
S Y AK L ++ +F GAR+I +WL A+++ A +P
Sbjct: 1015 ITSAYIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRGPRP 1074
Query: 598 -----------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMV 638
V WT+PLGLPVVQPYRK + + TS+Q + + +V
Sbjct: 1075 GPKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRKPIKKQVMTSMQTVFISDPNAPSEVSP 1134
Query: 639 KRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFV 698
++Q TAFPPNFVHSLD +HM++TAVAC QA + FA VHDSYWTHA V+ M+ ++R F+
Sbjct: 1135 QKQATAFPPNFVHSLDATHMLLTAVACNQANITFASVHDSYWTHASTVEPMSEVIRDSFI 1194
Query: 699 ELYETPILENLLEGF 713
L+ I+ L E F
Sbjct: 1195 HLHSNDIIGKLREEF 1209
>K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain CBS 8904) GN=A1Q2_04313 PE=3 SV=1
Length = 1321
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/675 (42%), Positives = 412/675 (61%), Gaps = 65/675 (9%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T PW +++ +G+ LVE L++TA + + G + +PAF HSF V
Sbjct: 552 TPPWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFEYVR------ 605
Query: 145 GRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
GRK G+I+ +P++ K L + S + ++ P ++PMLVPP W +++G +L +P+ +MR
Sbjct: 606 GRKLGVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNPWKAWNQGPYLTIPTTMMRFKD 665
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VD 258
+Q+ ++ A K LEPVF LD L T WR+N+ V VV + W G +AD+ +
Sbjct: 666 SVEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAE 725
Query: 259 RDDVPLPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
+ ++ +PE+PD +D + + R+ +++RC L +AR ++ FY
Sbjct: 726 KCEIVIPEKPDDPNDPTKRYEYVQAMKQLSLQQRKNHAERCKYNYNLEIARSYIND-VFY 784
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLANLY G DK
Sbjct: 785 IPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY--GYDK 842
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
S + RV F++ HV+DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS P F
Sbjct: 843 ASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDPSKFE 902
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
S +PVHQDG+CNG+QHYAALG D GA AVNL G++PAD+YS + A V + + +D +K
Sbjct: 903 SSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEADQKKG 962
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKLF 556
P AL + N + RK+VKQTVMT+VYGVT++GAR+QI ++L+ R D+ SDD ++
Sbjct: 963 ---VPTAL---LIKNPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSDD--VW 1014
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI--------------ASENQP----- 597
S Y AK L ++ +F GAR+I +WL A+++ A +P
Sbjct: 1015 ITSAYIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRGPRP 1074
Query: 598 -----------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMV 638
V WT+PLGLPVVQPYRK + + TS+Q + + +V
Sbjct: 1075 GPKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRKPIKKQVMTSMQTVFISDPNAPSEVSP 1134
Query: 639 KRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFV 698
++Q TAFPPNFVHSLD +HM++TAVAC QA + FA VHDSYWTHA V+ M+ ++R F+
Sbjct: 1135 QKQATAFPPNFVHSLDATHMLLTAVACNQANITFASVHDSYWTHASTVEPMSEVIRDSFI 1194
Query: 699 ELYETPILENLLEGF 713
L+ I+ L E F
Sbjct: 1195 HLHSNDIIGKLREEF 1209
>R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squalens (strain
LYAD-421) GN=DICSQDRAFT_130383 PE=4 SV=1
Length = 1273
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/689 (42%), Positives = 416/689 (60%), Gaps = 65/689 (9%)
Query: 72 QKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAY----IQPPSDQIVDGSPDIR 127
+++ A + + + T W ++R KVGS L++ +M A IQ P + + + +
Sbjct: 477 RRVTAAKYMEDAEEWTSDWSQLIRVKVGSFLLDCIMDVATVSRTIQDP--RTGEKFTEEQ 534
Query: 128 PAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS--AKNMVIPYMPMLVPPVNWTGY 185
PAF HS+ + GRK G+I+ +P + + + A + ++PMLV P W Y
Sbjct: 535 PAFSHSYEY------QRGRKLGVIKFNPAVADRMSKDPIADTLHPRHLPMLVKPKPWLSY 588
Query: 186 DKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVD 244
+ GG+L+ S+ MR ++Q ++ A + +LE VF LD LG T W++N++V VV
Sbjct: 589 NNGGYLYSRSWAMRFKDSREQEIYLRHASEAGRLELVFAGLDVLGSTPWQINRRVFDVVL 648
Query: 245 RIWASGGRLADLV----DRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDI 300
++W SG R A + D + PE DTD++A++ + +S RC +
Sbjct: 649 QVWNSGERFAKIPPAIPDEPEPVRPENMDTDNKAKVVYLERQRQWMQNKA-ANHSDRCSV 707
Query: 301 ELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGR 360
K+ +AR + Y PHNVDFRGRAYP+ PHL+H+G D+ RG+L F + +PLG G
Sbjct: 708 NYKVEIARAFLGD-TIYLPHNVDFRGRAYPIPPHLSHIGDDLSRGLLIFEEKKPLGTRGL 766
Query: 361 QWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAV 420
+WLKIHLANLY G DK S + RV + H++DIFDSADKPLEGRRWW A+DP+QCLA
Sbjct: 767 RWLKIHLANLY--GYDKASFDERVEYVHKHLEDIFDSADKPLEGRRWWTKADDPWQCLAT 824
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
C+ LT ALRS PE + +PVHQDG+CNGLQHYAALG D GAA VNL A ++P+DVY+
Sbjct: 825 CMELTSALRSPDPEAYECGLPVHQDGTCNGLQHYAALGGDAQGAAQVNLAAADRPSDVYT 884
Query: 481 GIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 540
+A V + D +KD I A+ L +V RK+VKQTVMT+VYGVTY+GAR+QI+
Sbjct: 885 YVANMVEKQIEEDIKKDDPI------AKLLEGKVSRKVVKQTVMTTVYGVTYVGARDQIE 938
Query: 541 RRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA------- 592
R+LK+R D+ ++ + AS Y AK L ++ ++F+GA+ I NWL CA++IA
Sbjct: 939 RQLKDRGDIPAE--MCWSASAYLAKNVLASIGDLFKGAKDIQNWLNLCARLIAKAIPQDR 996
Query: 593 ---SENQP---------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLT 628
S +P V WTTPLGLP+VQPYR + R + TS+Q +
Sbjct: 997 LVQSFTEPEKPNARSRKKEPRWKKEQMTSVVWTTPLGLPIVQPYRAVKRKQVMTSIQTVF 1056
Query: 629 LQRET--DKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDV 686
+ T V ++Q +AFPPNF+HSLD +HMM+TA+ C+ GL FA VHDSYWTHA +
Sbjct: 1057 ISDPTSPSTVNAQKQASAFPPNFIHSLDATHMMLTALECRARGLTFASVHDSYWTHASSI 1116
Query: 687 DDMNRILRGKFVELYETPILENLLEGFQK 715
D M+ I+R F+ L+ + +L+ L + F++
Sbjct: 1117 DQMSEIIRDTFIALHSSDVLKGLYDEFRE 1145
>Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) OS=Stygamoeba
sp. ruffled GN=mtRNAP PE=3 SV=1
Length = 661
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/597 (46%), Positives = 370/597 (61%), Gaps = 29/597 (4%)
Query: 129 AFVHSFRTVTKEAKKTGRKFGIIECDPLILKG-----LDRSAKNMVIPYMPMLVPPVNWT 183
AF H++ TK RK G I C P +L+ L + A + + +PM+VPP WT
Sbjct: 55 AFKHTYTYTTK------RKVGAITCAPSVLQTIRDGHLAQEANHARM--LPMVVPPKPWT 106
Query: 184 GYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVV 243
D GG+L + S VMR + Q + + + L V+ +LD L W++NK+VL V
Sbjct: 107 APDVGGYLVVKSNVMRVRDSRLQWDMLSKT-GTDLSNVYRSLDELSAVPWKINKRVLRVA 165
Query: 244 DRIWASGGRLADLVDRDDVPLPEEPDTD---DEAQIXXXXXXXXXXXXENRERYSQRCDI 300
+W GG + DL R D+PLPE PD D A+ N + +S RCD
Sbjct: 166 QELWQRGGGIGDLPSRTDLPLPEAPDNYKDMDPAERSAYYRHLRRQQRANADLHSLRCDT 225
Query: 301 ELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGR 360
LKL VA + ++ + FY+PHN+DFRGR YP+ PHLNHLGSD+CRG+L F++GR LG +G
Sbjct: 226 TLKLGVAEQFQNLDRFYFPHNMDFRGRTYPIPPHLNHLGSDLCRGLLCFSEGRELGPNGL 285
Query: 361 QWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAV 420
WLK+ LANL+ G +K S R F + ++ + +A P WW A+DP+Q L+
Sbjct: 286 GWLKVQLANLF--GNNKCSFADRQRFADENMARVLATAADP-ATETWWHAADDPWQALST 342
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
C LT+AL S P +S++P+H DGSCNGLQHYAALG D+ GA VNL+ +P DVYS
Sbjct: 343 CYELTDALASPDPARHVSYLPIHMDGSCNGLQHYAALGGDEEGARKVNLLPAPQPDDVYS 402
Query: 481 GIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 540
G+A V ++ DAQK +I A L +++ R++VKQTVMTSVYGVTY+GAR QI+
Sbjct: 403 GVATIVSRLVEEDAQKGHSI------ALLLRDRISRRIVKQTVMTSVYGVTYVGARAQIQ 456
Query: 541 RRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRW 600
L D+ DD + AS Y A TL A+ EMF GAR IM WL CA +IA +PV W
Sbjct: 457 NALSSTDLLDDDAA-WQASRYLAAHTLEAVREMFVGAREIMAWLATCAGLIAQSGEPVMW 515
Query: 601 TTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHM 658
TTPLGLPVVQPYR+ G+ ++T +Q +TLQ +D + V RQRTA PPNF+HSLD +HM
Sbjct: 516 TTPLGLPVVQPYRRPGKQFVQTVVQKVTLQESSDDLPIHVTRQRTAHPPNFIHSLDSTHM 575
Query: 659 MMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
M+T + G FA VHDSYWTHA VD MN+ILR KFV+++ P+LENLL F++
Sbjct: 576 MLTCLEMADQGYTFASVHDSYWTHARTVDPMNQILRQKFVDMHSEPLLENLLASFRR 632
>I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_29021 PE=3 SV=1
Length = 591
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/562 (47%), Positives = 359/562 (63%), Gaps = 33/562 (5%)
Query: 175 MLVPPVNWTGYDKGGHLFLPSYVMRTH----GVKQQREAVKRAPKKQLEPVFEALDTLGH 230
ML+PP+ W +D GGHL + +MR H GV + E + L V++AL+ +G
Sbjct: 1 MLIPPLPWRSHDSGGHLIMRGSIMRVHTYPKGVSRAIETAQERTPYGLSRVYDALNAVGE 60
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVDR--DDVPLPEEP------------------DT 270
W +NK +L+VV+R WA+ + L + D P P+
Sbjct: 61 VPWAINKPMLAVVERAWAAQLPICGLPVKYVDQKPQPKSTAKRFRTHHHRHQLQLLLTSQ 120
Query: 271 DDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYP 330
+ A+ RE +S RCD+ LKL VA + KDE FY+PHN+DFRGRAYP
Sbjct: 121 ETGAERTKRMKGNRLLNKRIRETHSLRCDLNLKLGVANEFKDELRFYFPHNLDFRGRAYP 180
Query: 331 MHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESH 390
+HPHLNH+G DVCRG+L FA+ RPLG G WL + +AN + +DK+ EGR F + +
Sbjct: 181 LHPHLNHMGPDVCRGLLTFAEARPLGPDGIGWLYVLIANSWGKSIDKMDFEGRRQFAQRN 240
Query: 391 VDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNG 450
++ + DSA++PL+G RWW E P+Q LA C+ + +AL S +P ++S +PV DGSCNG
Sbjct: 241 LEAVLDSAERPLDGHRWWTKGEKPWQLLAACMEVRDALASGNPAAYLSRLPVQIDGSCNG 300
Query: 451 LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTL 510
LQHYAALGRDK G +AVNL P DVY IA V ++ +DA+K P+AL L
Sbjct: 301 LQHYAALGRDKAGGSAVNLRPAPAPQDVYGEIAVEVNKMVAADAEKG---VPEAL---AL 354
Query: 511 VNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTAL 570
++RKLVKQTVMTSVYGVTY+GAR+QI+ RL ER +S++ +L+ + YAA++TL L
Sbjct: 355 QGHINRKLVKQTVMTSVYGVTYVGARQQIQNRLLERG-WSNNDQLYRCASYAARLTLQGL 413
Query: 571 EEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ 630
EE F A IM WLG+CA ++AS+ V W TPLGLPV+QPYR+ +H+++T LQ L L
Sbjct: 414 EEKFDKAVGIMRWLGQCASIVASQGNAVAWHTPLGLPVLQPYREKYKHVVQTVLQRLILM 473
Query: 631 --RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDD 688
RE V+ +RQ++AFPPN+VHSLD +HMMMTA+ACKQAG+AFAGVHDS+WTHA D
Sbjct: 474 QDREGLPVLRRRQKSAFPPNYVHSLDSTHMMMTALACKQAGIAFAGVHDSFWTHAGDTAV 533
Query: 689 MNRILRGKFVELYETPILENLL 710
+ R LR FVEL+ P+L LL
Sbjct: 534 LARKLRETFVELHSQPLLAQLL 555
>F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C137G7135 PE=3 SV=1
Length = 1012
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 299/703 (42%), Positives = 413/703 (58%), Gaps = 71/703 (10%)
Query: 55 IKEDEKLRKKVIDLMKKQKIAAVRGIMKD---------QNDTKPWGPVMRTKVGSRLVEL 105
I E+++ RK +K ++ VRGI D W + KVG+ L++
Sbjct: 288 ICENKRKRKDS----EKYFLSLVRGIQNDVFRKHMENVYTTAGYWDKRLNLKVGAALIDF 343
Query: 106 LMQTAYIQ----PPSDQIVDGS---------PDIRPAFVHSFRTVTKEAKKTGRKFGIIE 152
+ ++ Y+ + + V G+ P AFVH + + R+ G+ +
Sbjct: 344 IQRSCYVPDRLLQAAGRKVHGTLEEHDPEKPPKKEQAFVHCYYY------ERNRRSGMFK 397
Query: 153 CDPLILKGLDRSAKNM-VIP----YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQR 207
I + + M V+P Y+PMLVPP W + GG+L L + +MR + Q
Sbjct: 398 MHDTIFNLILNTDPGMNVLPWTARYLPMLVPPKRWENPNNGGYLKLHTKIMRQRDIVWQM 457
Query: 208 EAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEE 267
+ VKRAP L+ VF L+ L W +N+++L V+ RIW GG DL R+D P P+
Sbjct: 458 DCVKRAP---LQEVFTTLNLLAEVPWVINQEILDVILRIWQEGGGFGDLPSREDFPFPDN 514
Query: 268 P--DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFR 325
D +D + NRE +S RCD KL VA++ ++E+ Y+P+N+DFR
Sbjct: 515 KPEDEEDPEKRQALAKAHAKVRQRNRELHSLRCDTLYKLQVAQEFRNEKEIYFPYNLDFR 574
Query: 326 GRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVS 385
GR YP+ P+LNHLGSD+ R +L F D +PLGK G +WLKIHLAN++ GVDK S + RV+
Sbjct: 575 GRVYPIPPNLNHLGSDMSRSLLLFRDRKPLGKDGLRWLKIHLANVF--GVDKCSFDERVA 632
Query: 386 FTESHVDDIFDSADKP--LEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVH 443
FTES++ +F SA P + WW AE PF L VC L AL S PET++S+IPVH
Sbjct: 633 FTESNLTKVFASARDPHGVGDAVWWKTAEYPFLALGVCFELKRALNSPDPETYLSNIPVH 692
Query: 444 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPD 503
QDGSCNGLQHYAALGRD G VNLV +P DVY +A +V+D++ DA + I D
Sbjct: 693 QDGSCNGLQHYAALGRDLKGGEQVNLVPASRPGDVYIKVAEQVMDLVNRDANLE--IPED 750
Query: 504 ALHART------------LVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDV--- 548
A R L+ + R++VKQTVMTSVYGVT+IGAR+QI+ RL+E ++
Sbjct: 751 ATPERKLSLAHRKRCATFLLGTITRRVVKQTVMTSVYGVTFIGARKQIQARLQEANLSNG 810
Query: 549 -FSD---DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPL 604
SD D +++ +SCYAA++T+ +L +F AR+IM WLG+CA +A E Q + W TPL
Sbjct: 811 NLSDEEMDQQVYDSSCYAAEITMESLRNLFTSARNIMEWLGDCASKVAEEGQLMSWITPL 870
Query: 605 GLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVK--RQRTAFPPNFVHSLDGSHMMMTA 662
GLPVVQPYR+ G ++T +Q + L TD + V RQ++AFPPNFVHSLD +HM+MTA
Sbjct: 871 GLPVVQPYRRFGSQQVRTKVQHV-LMVSTDHLPVSPGRQKSAFPPNFVHSLDSTHMLMTA 929
Query: 663 VAC-KQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETP 704
C ++ +AFA VHDSYWTHAC V+ MN LR +FV LYE P
Sbjct: 930 KKCLEEDAIAFAAVHDSYWTHACSVETMNMRLREEFVRLYEHP 972
>K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_261459 PE=3 SV=1
Length = 1324
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 287/682 (42%), Positives = 412/682 (60%), Gaps = 63/682 (9%)
Query: 76 AVRGIMKDQND-TKPWGPVMRTKVGSRLVELLMQTAYIQPPS-DQIVDGSPDIRPAFVHS 133
A R M+D + T W +R +VGS LV+ LM A + + D+ + + +PAF HS
Sbjct: 537 AARKYMEDYEEWTSEWTQTIRVRVGSFLVDALMDVATVSRTAIDKHGELHTEEQPAFYHS 596
Query: 134 FRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP-----YMPMLVPPVNWTGYDKG 188
+ + G+K G+I+ +P++ DR AK+ V ++PMLV P W +D+G
Sbjct: 597 YEYLR------GQKLGVIKLNPVVA---DRLAKDQVRETLHPRHLPMLVRPKPWLSHDQG 647
Query: 189 GHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIW 247
G+L+ + VMR ++Q+ V+ A + LE V+ +LD LG T W++N+ + VV ++W
Sbjct: 648 GYLYNKTSVMRYKDSREQQSYVREASSQGALELVYASLDVLGGTPWKINRHIFDVVLKVW 707
Query: 248 ASGGRLADLVDR-DDVPLPEEP---DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELK 303
SG RL + D P PE+P DTD +A++ + +S RC+ K
Sbjct: 708 NSGERLGKIPPAMYDQPEPEKPADHDTDPKAKVAYLQRHKAYMS-KKANNHSDRCNTNYK 766
Query: 304 LAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWL 363
+ +AR + Y PHNVDFRGRAYP+ P+LNHLG D+ RG+L+FA+ +PLG+ G +W+
Sbjct: 767 IEIARAFLGD-TVYLPHNVDFRGRAYPIPPNLNHLGDDLSRGLLKFAEAKPLGERGLRWM 825
Query: 364 KIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIT 423
KIHLANLY G DK S + RV F H+DDIFDSA PLEGR WW A+DP+QCLA C+
Sbjct: 826 KIHLANLY--GYDKASFDERVVFVHEHLDDIFDSATNPLEGRGWWKKADDPWQCLATCME 883
Query: 424 LTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 483
+ AL S P + S +PVHQDG+CNGLQHYAALG D GA VNL ++P+DVY+ +A
Sbjct: 884 IRAALESPEPTEYASSLPVHQDGTCNGLQHYAALGGDAQGAQQVNLSVTDRPSDVYTHVA 943
Query: 484 ARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL 543
V ++ DA+ D +A+ L ++ RK+VKQTVMT+VYGVT+IGAR+QI+R+L
Sbjct: 944 TMVESVLAQDAKN------DLRYAKMLSGKIARKVVKQTVMTTVYGVTFIGARDQIERQL 997
Query: 544 KE-RDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR--- 599
++ RD+ +++ L A+ Y AK+TL + ++F GA+ I NWL AK+I+ P R
Sbjct: 998 RDRRDLPAEECWL--AAAYLAKITLACIGDLFTGAKHIQNWLNLSAKLISKSIPPERIEE 1055
Query: 600 ------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDK 635
WTTPLGLP+VQPYR+ R I T+LQ + +
Sbjct: 1056 ATKPSAKKGRVETRLKKEQMTSVIWTTPLGLPIVQPYRQTKRKQIHTALQTVFISDPNVP 1115
Query: 636 VMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRIL 693
V +Q +AFPPNF+HSLD +HMM+TA+ C+ + FA VHDSYWTHAC VD+M+ I+
Sbjct: 1116 AAVNSTKQASAFPPNFIHSLDATHMMLTALQCRNRDITFASVHDSYWTHACSVDEMSEII 1175
Query: 694 RGKFVELYETPILENLLEGFQK 715
R F+ L+ + ++ L E F++
Sbjct: 1176 RETFIALHSSDVMAKLDEEFRE 1197
>B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 323
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/294 (85%), Positives = 273/294 (92%)
Query: 422 ITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 481
+ LTEALRSSSPET ISHIPVHQDGSCNGLQHYAALG+DKLGA AVNLVAGEKPADVY+G
Sbjct: 1 MNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTG 60
Query: 482 IAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKR 541
IA RV++IMR DAQKDP++ PDA AR +V+QVDRKLVKQTVMTSVYGVTYIGAREQI+R
Sbjct: 61 IANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRR 120
Query: 542 RLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWT 601
RLKER V +D++LFGASCYAAKVTLTAL EMFQ ARSIMNWLG+CAKVIA EN+PVRWT
Sbjct: 121 RLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWT 180
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 661
TPLGLPVVQPYRKLGRH+IKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT
Sbjct: 181 TPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 240
Query: 662 AVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
AVACK+ GL FAGVHDSYWTHA DVD MN+ILR KFVELY+TPILENLLE F+K
Sbjct: 241 AVACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEK 294
>J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_01835 PE=3 SV=1
Length = 1321
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/686 (41%), Positives = 404/686 (58%), Gaps = 66/686 (9%)
Query: 76 AVRGIMKDQND-TKPWGPVMRTKVGSRLVELLMQTAYIQPPS--DQIVDGSPDIRPAFVH 132
A R M+D D T W V+R KVGS LV+ LM A + + + + +PAF H
Sbjct: 522 AARKFMEDAEDWTTDWTQVVRVKVGSFLVDALMDVATVMRTGVDKRTGEAISEEQPAFFH 581
Query: 133 SFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP-YMPMLVPPVNWTGYDKGGH 190
S+ + G K G+I+ +PLI + + + S + + P ++PMLV P W +D+GG+
Sbjct: 582 SYEYLR------GYKLGVIKLNPLISEKMAKESIRETLHPRHLPMLVKPKPWLSHDQGGY 635
Query: 191 LFLPSYVMRTHGVKQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWAS 249
L+ ++VMR ++Q+ ++ A LE ++ +LD LG+T W++N+++ +V +W S
Sbjct: 636 LYNKTWVMRFKESQEQQSYLRHASSLGNLELIYASLDVLGNTPWKINRRIFDIVLEVWNS 695
Query: 250 GGRLADLVDRD-DVPLPEEP---DTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLA 305
G R + D P PE+P DTD A++ +S RC + K+
Sbjct: 696 GTRWCKIPPAAFDAPEPEKPENFDTDPRAKMIYLTRQKQYALGRANN-HSDRCSVNYKIE 754
Query: 306 VARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKI 365
+AR + Y+PHNVDFRGRAYP+ PHL+H+G D+ RG+L F + +PLG+ G +WLKI
Sbjct: 755 IARAFLGD-TIYFPHNVDFRGRAYPLPPHLSHIGDDLSRGLLMFGEAKPLGERGLRWLKI 813
Query: 366 HLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLT 425
HLANLY G DK + + RVSF H+DDIFDSAD PLEG++WW A+DP+QCLA CI L
Sbjct: 814 HLANLY--GYDKANFDERVSFVHDHLDDIFDSADNPLEGKKWWTKADDPWQCLATCIELK 871
Query: 426 EALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 485
AL+S P T+ +PVHQDG+CNGLQHYAALG D GA VNL ++P+DVY+ +A
Sbjct: 872 AALQSPDPHTYECALPVHQDGTCNGLQHYAALGGDAQGARQVNLDVTDRPSDVYTFVAEM 931
Query: 486 VLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE 545
V M D + D +A+ L ++ RK+VKQTVMT+VYGVT+IGAREQI+++LK+
Sbjct: 932 VEKAMEEDVKLDHK------YAKMLTGKISRKVVKQTVMTTVYGVTFIGAREQIEKQLKD 985
Query: 546 R-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR----- 599
R D+ +++ L A+ Y AK L + ++F+GA+ I WL CA++IA P R
Sbjct: 986 RGDIAAEECWL--AASYVAKKVLLCIGDLFKGAKDIQTWLNSCARLIAKSIPPDRLDAAT 1043
Query: 600 ------------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTL 629
WTTPLGLP+VQPYR R I TSLQ + +
Sbjct: 1044 DVERTFGTGRKMVKSTEATRLKKEQMTSVVWTTPLGLPIVQPYRATRRKQIITSLQTVFI 1103
Query: 630 Q--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVD 687
V +Q +AFPPNF+HSLD +HMM+TA+ CK G+ FA VHDSYWTH +D
Sbjct: 1104 SDPNSPTSVNASKQASAFPPNFIHSLDATHMMLTALECKTQGVTFASVHDSYWTHPSSID 1163
Query: 688 DMNRILRGKFVELYETPILENLLEGF 713
M+ I+R F+ L+ + +L L + F
Sbjct: 1164 QMSTIIRDTFIALHSSDVLGKLGDEF 1189
>K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G002918 PE=3 SV=1
Length = 1018
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/677 (43%), Positives = 405/677 (59%), Gaps = 67/677 (9%)
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI--RPAFVHSFRTVTKEA 141
+D W + KVG+ L++ + ++ +I + GS ++ +PAFVH +
Sbjct: 325 HDDVGGWDKRINLKVGAALIDCIQRSCFIP-----VEKGSKEMSNQPAFVHDY------V 373
Query: 142 KKTGRKFGIIECDPLILKG-LDRSAKNMVIP----YMPMLVPPVNWTGYDKGGHLFLPSY 196
+ R+ G+I+ P I L ++P Y+PMLVPP NW GG+L L +
Sbjct: 374 FERNRRAGVIKIHPTIANAVLSTKPGANILPWTARYLPMLVPPKNWDSVVNGGYLKLHTK 433
Query: 197 VMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL 256
+MR Q + VKR QL F++L+ L W +N VL V+ ++W +GG DL
Sbjct: 434 IMRQRDSAWQMDCVKRGEMDQL---FKSLNLLASVPWVINTDVLDVILKVWENGGGFGDL 490
Query: 257 VDRDDVPLPE---EPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDE 313
R D+ PE E + D E + N+E +S RCD KL VA + K E
Sbjct: 491 PQRTDIEPPEWKAEYEHDAEKR-DTYEKMVRKIQQRNQELHSLRCDTLYKLQVAEEFKHE 549
Query: 314 EAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAG 373
+A YYP+N+DFRGR YP+ P+LNHLGSD+ R +L F D +PLGK+G +W+KIHLAN++
Sbjct: 550 KALYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGKNGLRWMKIHLANVF-- 607
Query: 374 GVDKLSLEGRVSFTESHVDDIFDSADKPL-EGR-RWWLNAEDPFQCLAVCITLTEALRSS 431
GVDK S + RV FT++++ SA P EG WW +A+ PF L VC L AL S
Sbjct: 608 GVDKCSFDERVEFTDANLSKAIASACDPFGEGDCAWWKDADYPFLALGVCFELKRALESP 667
Query: 432 SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR 491
PE + S+IP+HQDGSCNGLQHYAALGRD LG VNLV +P+DVY+G+A +V+ +
Sbjct: 668 DPEKYESNIPIHQDGSCNGLQHYAALGRDALGGQQVNLVPAPRPSDVYTGVATQVMRKVE 727
Query: 492 SDAQKD-PAIFPD----------------------------ALHARTLVNQVDRKLVKQT 522
DA + P I PD +A+ L+ + RK+VKQT
Sbjct: 728 RDAAMELPEIIPDMERILDDDSPAERARKMAIKEQWNLRRRKKYAQFLLGTITRKVVKQT 787
Query: 523 VMTSVYGVTYIGAREQIKRRLKE----RDVFSD---DTKLFGASCYAAKVTLTALEEMFQ 575
VMTSVYGVTYIGAR+QI RL+E + + D + +++ ASCYAA+VT+ ++ ++F
Sbjct: 788 VMTSVYGVTYIGARKQISARLEEVFLTKGMMMDSELEDQIYHASCYAAEVTMESMGDLFT 847
Query: 576 GARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQ-MLTLQRETD 634
AR+IM WLG+CA +AS Q + W TPLGLPVVQPYR+ ++T +Q +L + E
Sbjct: 848 SARNIMTWLGDCASKVASNGQAMSWITPLGLPVVQPYRRNTSQQVRTKVQHVLMVLTEQL 907
Query: 635 KVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC-KQAGLAFAGVHDSYWTHACDVDDMNRIL 693
V RQ+TAFPPNFVHSLD +HM+MTA+ C ++ +AFA VHDSYWTHAC VD MN+ L
Sbjct: 908 PVSSGRQKTAFPPNFVHSLDSTHMLMTALKCLEEDEIAFAAVHDSYWTHACSVDTMNKRL 967
Query: 694 RGKFVELYETPILENLL 710
R +FV+LY+ P+LE+LL
Sbjct: 968 REQFVDLYQKPLLEDLL 984
>Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyostelium discoideum
GN=rpmA PE=2 SV=1
Length = 950
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/549 (48%), Positives = 351/549 (63%), Gaps = 20/549 (3%)
Query: 173 MPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTK 232
PM++ P+ W +G +L +MRT+G Q ++ + ++ AL+ LG T
Sbjct: 385 FPMVIKPLPWITPTEGPYLHYKVPIMRTNGSAMQ---LRTLVDSDMSLIYRALNILGETP 441
Query: 233 WRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDT---DDEAQIXXXXXXXXXXXXE 289
W +N+ + +V+ WA+GG + D+ R D PE D D EA+
Sbjct: 442 WVINRDLYNVILEAWANGGNIGDIPKRTDFEYPEISDDMLFDHEAR-KELYKKEQRIKSL 500
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
N +S RCD KL VARK D Y+PHN+DFRGR+YP+ PHLNHLGSD CR +L+F
Sbjct: 501 NFNLHSLRCDTNYKLEVARKFLDH-TLYFPHNIDFRGRSYPIPPHLNHLGSDFCRSLLKF 559
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
PLG+ G +WLKIH+ANLY GVDK+ L R++FTE ++++IFDS D PL G +WWL
Sbjct: 560 EKSLPLGEKGLEWLKIHVANLY--GVDKIPLNERLAFTERNMENIFDSVDSPLNGNKWWL 617
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
A++P+Q LA C+ LT+A+RS P F+S++P+HQDG+CNGLQHYAALG D GA VNL
Sbjct: 618 KADNPWQTLAACMELTKAIRSGKPAEFLSNLPIHQDGTCNGLQHYAALGGDVWGAEKVNL 677
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
+ + P DVYS +A V I+ DA+ I A+ + +VDRKLVKQTVMTSVYG
Sbjct: 678 LPSDCPQDVYSSVAQLVEQIVEEDAKNGDEI------AQFFLGKVDRKLVKQTVMTSVYG 731
Query: 530 VTYIGAREQIKRRLKER--DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGEC 587
VTYIGAREQI+ + E+ D+ D+ +F +S Y K T +L MF GARSIM W+ +C
Sbjct: 732 VTYIGAREQIENAILEKFSDLDLDEDFIFKSSTYITKNTFASLNNMFVGARSIMKWMSDC 791
Query: 588 AKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMV--KRQRTAF 645
A +IA V W TPLGLPVVQPY+K G++ I+T + D + V RQR+AF
Sbjct: 792 ATLIAKSGHCVTWNTPLGLPVVQPYKKGGKYNIRTLECDFIVVHNDDLLQVDSNRQRSAF 851
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPNF+HSLD +HM +TA+ C G+ ++ VHDSYWTHA VD MN ILR +FVEL++ PI
Sbjct: 852 PPNFIHSLDSTHMFLTAMTCYDQGITYSSVHDSYWTHASTVDRMNDILRNEFVELHKQPI 911
Query: 706 LENLLEGFQ 714
LE LLE FQ
Sbjct: 912 LERLLEWFQ 920
>G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00004g535 PE=3 SV=1
Length = 1466
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 290/672 (43%), Positives = 397/672 (59%), Gaps = 64/672 (9%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-PPSDQIVDGSPDI-----RPAFVHSFRTVTKEAKK 143
W +R KVGS LV LL Q A I+ P+++ V D +PA VH ++ V
Sbjct: 603 WSQPVRAKVGSVLVSLLFQVAKIKVRPTNKKVLKHMDKDLAIDQPALVHGYQFVG----- 657
Query: 144 TGRKFGIIEC-DPLILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTH 201
G+K G+I D K + K + +PM+ P W ++ G + F P+ ++R
Sbjct: 658 -GKKIGVIRLHDEFSKKLMTEPLKGTTLAKQLPMIAKPRPWCAWNDGAYYFTPTRMVRVK 716
Query: 202 GVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL--VD 258
+Q VK A K L+ +F LD LG T W +N+KV V+ ++W +G + AD+
Sbjct: 717 DSLEQTMYVKEASKHGNLDRLFTGLDVLGSTAWTINQKVFDVILQVWNTGDKFADIPPTF 776
Query: 259 RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERY-SQRCDIELKLAVARKMKDEEAFY 317
DV +PE P + +A R+ + SQRCD+ KL +AR +E FY
Sbjct: 777 EKDVNMPEMPQPNADAAAKAAFKIAYQEMALIRKNHHSQRCDVNFKLEIARAFYNE-VFY 835
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
+PHNVDFRGRAY M PHLNHLG+D+CRG+L+F++ +PLG+SG +WLKIHL+NL GG DK
Sbjct: 836 FPHNVDFRGRAYAMPPHLNHLGNDLCRGLLKFSEKKPLGESGLRWLKIHLSNL--GGYDK 893
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
SL R + ES ++D+FDSA PL G+RWWL +EDP+Q LA C+ L A+ S P +
Sbjct: 894 ASLMAREEWAESRMEDVFDSARDPLGGKRWWLESEDPWQMLATCMELEAAMSSKDPLKYE 953
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
S++PVHQDG+CNGLQHYAALG D +GA VNL +KP DVY+G+A V + DAQ
Sbjct: 954 SNMPVHQDGTCNGLQHYAALGGDIVGAKQVNLEPADKPQDVYTGVADLVNQAVAEDAQNG 1013
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
+ A+ L+ ++RK+VKQTVMT+VYGVT+IGA+ Q+K RL E+ V+ D ++
Sbjct: 1014 NEL------AKDLLGHINRKVVKQTVMTNVYGVTFIGAKNQVKSRLMEKGVWPRD-RVDK 1066
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP-------------------- 597
S Y K T+L+ MF GA I W GECAK I+ P
Sbjct: 1067 LSIYLTKKIFTSLQSMFTGAHLIQKWFGECAKRISRSVSPTQYASFAEHYTGVIPTTGRQ 1126
Query: 598 --------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRET--DKVMVKRQ 641
V WTTPLGLPVVQPYR +KT+LQ +T+ + ++V +RQ
Sbjct: 1127 AHTKERGKAEFMTSVVWTTPLGLPVVQPYRHDATVAVKTNLQQITIVDTSIINQVNSRRQ 1186
Query: 642 RTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELY 701
AFPPN++HSLD +HM+++A+A KQAGL FA VHDS+WTH+CDVD M+R+LR FVEL+
Sbjct: 1187 MGAFPPNYIHSLDATHMLLSAMASKQAGLTFAAVHDSFWTHSCDVDTMSRVLRDAFVELH 1246
Query: 702 ETPILENLLEGF 713
++ L E F
Sbjct: 1247 SEDLVSKLREEF 1258
>R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ichthyophaga EXF-994
GN=J056_000290 PE=4 SV=1
Length = 1311
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 283/682 (41%), Positives = 399/682 (58%), Gaps = 54/682 (7%)
Query: 67 DLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI 126
D+ ++ +A V ++ T W ++R KVGS LV+ LM+ A I +D+ + +
Sbjct: 509 DIASERALARVHEERMNRAWTPNWSQMIRIKVGSFLVDSLMECATITRIADRDGEEIKET 568
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP--YMPMLVPPVNWTG 184
+PAF S++ V GRK G+I+ + ++ LD+ I ++PMLV P W
Sbjct: 569 QPAFSQSYQYVR------GRKLGVIKVNTVVADRLDKDPLGSTIHPRHLPMLVKPKPWLR 622
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVV 243
YD GG+LF ++ MR +Q+ + +A + +EPV LD LG T W VN+KV +VV
Sbjct: 623 YDNGGYLFHKNFAMRFKDSNEQQSYIAKASNEGTMEPVLAGLDVLGQTPWNVNQKVFAVV 682
Query: 244 DRIWASGGRLADLVD-RDDVPLPEEPDT--DDEAQIXXXXXXXXXXXXENRERYSQRCDI 300
+ W SG +A + P P +P D Q E R +S RCD
Sbjct: 683 KQAWNSGEGVAKIPPATTHTPDPIKPSNYESDPKQRSNYLISMKAVVNERRNNHSIRCDT 742
Query: 301 ELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGR 360
KL +A+ +E FY+PH +DFRGRAYP+ PHLNH+G D+ RG+L+FA+ RPLG+ G
Sbjct: 743 NYKLEIAKAFLNE-TFYFPHTLDFRGRAYPIPPHLNHIGDDLSRGLLKFAETRPLGEKGM 801
Query: 361 QWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAV 420
+WLKIHLAN+Y G DK S R +F + H+ DI+DSAD+PL+GR WWL A+DP+QCLA
Sbjct: 802 RWLKIHLANVY--GYDKASFNERENFADEHLADIYDSADRPLDGRGWWLKADDPWQCLAA 859
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
C + AL SS+P + S +PVHQDG+CNGLQHYAALG D +GA VNL ++P+DVY+
Sbjct: 860 CYEIQAALESSNPLAYESSLPVHQDGTCNGLQHYAALGGDPMGAKQVNLEQADRPSDVYT 919
Query: 481 GIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 540
+A V+ +R DAQ D F A+ L ++ RK+VKQTVMT+VYGVT+IGAR+QI
Sbjct: 920 AVADLVIADIRRDAQTDDNAF-----AKLLEGKITRKVVKQTVMTTVYGVTFIGARDQID 974
Query: 541 RRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR- 599
++L++R + ++ + Y AK L ++ ++F GA +I WL A+ ++ P R
Sbjct: 975 KQLQDRGDIPREL-IYSTASYLAKKVLRSIGDLFSGANAIQKWLSMSARYVSKSIPPERL 1033
Query: 600 ------------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTL 629
WTTPLGLP+VQPYRK + I T LQ + L
Sbjct: 1034 VKALEPAEGRSASGKSTASRTSKEQMTSVIWTTPLGLPIVQPYRKAKKKQIATLLQSVYL 1093
Query: 630 QRETDKVMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVD 687
V +Q +AFPPNF+HSLD +HM++TA+ C Q G+ +A VHDSYWTHA VD
Sbjct: 1094 ADPNLPTEVNPIKQASAFPPNFIHSLDATHMILTALQCCQIGITYASVHDSYWTHASTVD 1153
Query: 688 DMNRILRGKFVELYETPILENL 709
M+ I+R FV+L+ IL+ L
Sbjct: 1154 HMSEIIRDTFVKLHCEEILKRL 1175
>Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 282/670 (42%), Positives = 401/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WR+N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS SP
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPSPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1202
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 400/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F + +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNQKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 401/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WR+N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDVIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1180
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 399/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1180
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 399/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1180
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 399/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 401/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WR+N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLSTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_363576 PE=3 SV=1
Length = 1134
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/690 (40%), Positives = 405/690 (58%), Gaps = 62/690 (8%)
Query: 69 MKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPS--DQIVDGSPDI 126
+ +++ A + M + T W ++R +VGS LV+ LM A + + + + +
Sbjct: 335 LHARRVTAAKYTMDSEEWTTEWTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISED 394
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP-----YMPMLVPPVN 181
+PAF H++ V G+K G+I +P++ DR AK+ + ++PMLV P
Sbjct: 395 QPAFYHAYEYVR------GQKLGVIRLNPVVA---DRIAKDGLRETLHPRHLPMLVKPKP 445
Query: 182 WTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVL 240
W YD+GG+L+ S MR ++Q+ ++ A + +E V+ LD LG T W++N+ V
Sbjct: 446 WLNYDQGGYLYNKSSAMRFKDSQEQQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVF 505
Query: 241 SVVDRIWASGGRLADLVDRD-DVPLPEEPD--TDDEAQIXXXXXXXXXXXXENRERYSQR 297
VV +W SG RL L D P PE+PD + D +S R
Sbjct: 506 DVVLTVWNSGERLCKLPPSVFDQPEPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDR 565
Query: 298 CDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGK 357
C + K+ +AR + Y PHN+DFRGRAYP+ PHLNH+G D+ RG+L F + +PLG+
Sbjct: 566 CSVNYKIEIARAFLGD-TMYLPHNLDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGE 624
Query: 358 SGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQC 417
G +WLKIHLANLY G DK + + RV + +D+++DSA+KPLEGRRWW A+DP+QC
Sbjct: 625 RGLRWLKIHLANLY--GFDKANFDERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQC 682
Query: 418 LAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 477
LA C+ L AL S PE ++S +PVHQDG+CNGLQHYAALG D GA VNL E+P+D
Sbjct: 683 LATCMELRAALESEDPEAYMSSLPVHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSD 742
Query: 478 VYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGARE 537
VY+ +A V + DA D +A+ L +V RK+VKQTVMT+VYGVTYIGAR+
Sbjct: 743 VYTYVANMVQRQLDEDAANDHK------YAKMLQGKVARKVVKQTVMTTVYGVTYIGARD 796
Query: 538 QIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA----S 593
QI+R+LK+R ++ + + A+ Y AK TL + ++F GA++I WL CA+++A +
Sbjct: 797 QIERQLKDRKDIPEE-ECWNAAAYLAKKTLFCIGDLFSGAKAIQTWLNLCARLVAKSIPA 855
Query: 594 ENQP--------------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQML 627
E P V WTTPLGLP+VQPYRK+ R I T+LQ +
Sbjct: 856 ERIPEALEAEKTKRRLPVSTNRIRKEQMTSVVWTTPLGLPIVQPYRKVKRKQIMTALQTV 915
Query: 628 TLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACD 685
+ +V +Q +AFPPNF+HSLD +HMM+TA+ C+ G+ FA VHDSYWTHA
Sbjct: 916 YISDPNAPAEVNANKQASAFPPNFIHSLDATHMMLTALECRTQGVTFASVHDSYWTHASS 975
Query: 686 VDDMNRILRGKFVELYETPILENLLEGFQK 715
+D M+ I+R F+ L+ + +L L F++
Sbjct: 976 IDQMSEIIRDTFIALHSSDVLGKLYSEFKE 1005
>Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1202
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 399/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1202
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 399/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEMITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELASALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPARVQEAATNLTNTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_114135 PE=3 SV=1
Length = 986
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/690 (40%), Positives = 405/690 (58%), Gaps = 62/690 (8%)
Query: 69 MKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPS--DQIVDGSPDI 126
+ +++ A + M + T W ++R +VGS LV+ LM A + + + + +
Sbjct: 187 LHARRVTAAKYTMDSEEWTTEWTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISED 246
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP-----YMPMLVPPVN 181
+PAF H++ V G+K G+I +P++ DR AK+ + ++PMLV P
Sbjct: 247 QPAFYHAYEYVR------GQKLGVIRLNPVVA---DRIAKDGLRETLHPRHLPMLVKPKP 297
Query: 182 WTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVL 240
W YD+GG+L+ S MR ++Q+ ++ A + +E V+ LD LG T W++N+ V
Sbjct: 298 WLNYDQGGYLYNKSSAMRFKDSQEQQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVF 357
Query: 241 SVVDRIWASGGRLADLVDRD-DVPLPEEPD--TDDEAQIXXXXXXXXXXXXENRERYSQR 297
VV +W SG RL L D P PE+PD + D +S R
Sbjct: 358 DVVLTVWNSGERLCKLPPSVFDQPEPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDR 417
Query: 298 CDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGK 357
C + K+ +AR + Y PHN+DFRGRAYP+ PHLNH+G D+ RG+L F + +PLG+
Sbjct: 418 CSVNYKIEIARAFLGD-TMYLPHNLDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGE 476
Query: 358 SGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQC 417
G +WLKIHLANLY G DK + + RV + +D+++DSA+KPLEGRRWW A+DP+QC
Sbjct: 477 RGLRWLKIHLANLY--GFDKANFDERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQC 534
Query: 418 LAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 477
LA C+ L AL S PE ++S +PVHQDG+CNGLQHYAALG D GA VNL E+P+D
Sbjct: 535 LATCMELRAALESEDPEAYMSSLPVHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSD 594
Query: 478 VYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGARE 537
VY+ +A V + DA D +A+ L +V RK+VKQTVMT+VYGVTYIGAR+
Sbjct: 595 VYTYVANMVQRQLDEDAANDHK------YAKMLQGKVARKVVKQTVMTTVYGVTYIGARD 648
Query: 538 QIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA----S 593
QI+R+LK+R ++ + + A+ Y AK TL + ++F GA++I WL CA+++A +
Sbjct: 649 QIERQLKDRKDIPEE-ECWNAAAYLAKKTLFCIGDLFSGAKAIQTWLNLCARLVAKSIPA 707
Query: 594 ENQP--------------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQML 627
E P V WTTPLGLP+VQPYRK+ R I T+LQ +
Sbjct: 708 ERIPEALEAEKTKRRLPVSTNRIRKEQMTSVVWTTPLGLPIVQPYRKVKRKQIMTALQTV 767
Query: 628 TLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACD 685
+ +V +Q +AFPPNF+HSLD +HMM+TA+ C+ G+ FA VHDSYWTHA
Sbjct: 768 YISDPNAPAEVNANKQASAFPPNFIHSLDATHMMLTALECRTQGVTFASVHDSYWTHASS 827
Query: 686 VDDMNRILRGKFVELYETPILENLLEGFQK 715
+D M+ I+R F+ L+ + +L L F++
Sbjct: 828 IDQMSEIIRDTFIALHSSDVLGKLYSEFKE 857
>Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/670 (41%), Positives = 400/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WR+N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLAACFELAAALRSPDPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=2
Length = 1202
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/670 (42%), Positives = 398/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ A ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T WRVN++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESWNRGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--I 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPIPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+YSG V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYSG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 ITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=1
Length = 1180
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/684 (41%), Positives = 404/684 (59%), Gaps = 66/684 (9%)
Query: 79 GIMKDQND------TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAF 130
GI+ +D T W +++ VGS LV+ L++ A ++ + G +++PAF
Sbjct: 391 GILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAF 450
Query: 131 VHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKG 188
H++ V G+K G+I+ +P++ L + +VI ++PMLV P WT ++KG
Sbjct: 451 THAYEYVR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKG 504
Query: 189 GHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIW 247
G+L VMR +Q++ +K A ++ LEPVF LD L T WRVN++V VV W
Sbjct: 505 GYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESW 564
Query: 248 ASGGRLADLVDRDD---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIEL 302
G +AD+ +D PE+PD+ D+ + R+ +++RC
Sbjct: 565 NRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNY 624
Query: 303 KLAVARK-MKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQ 361
+ +AR +KD FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +
Sbjct: 625 NIEIARSYLKD--IFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLK 682
Query: 362 WLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVC 421
WL+IHLAN+Y G DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C
Sbjct: 683 WLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATC 740
Query: 422 ITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 481
L ALRS +P + S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G
Sbjct: 741 FELAAALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG 800
Query: 482 IAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKR 541
V+DI+ ++D D A + + RK+VKQTVMT+VYGVT++GAR+QI +
Sbjct: 801 ----VVDIVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAK 854
Query: 542 RLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR-- 599
+L R + + +F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 855 QLHARGDIAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQ 913
Query: 600 ----------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ- 630
WTTPLGLPVVQPYRK + I T+LQ + +
Sbjct: 914 EAATNLTSTSRTGKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISD 973
Query: 631 -RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDM 689
+V ++Q TAFPPNF+HSLD +HM++TA+ CKQ +AFA VHDSYWTHA V+ M
Sbjct: 974 PNAPSEVSPQKQATAFPPNFIHSLDATHMLLTALKCKQNNVAFASVHDSYWTHAATVEKM 1033
Query: 690 NRILRGKFVELYETPILENLLEGF 713
+ ++R FVEL+ ++ L E F
Sbjct: 1034 SDLIRDTFVELHSQDLVGKLREDF 1057
>M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidioschyzon merolae
strain 10D GN=CYME_CMJ257C PE=3 SV=1
Length = 1252
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/657 (44%), Positives = 391/657 (59%), Gaps = 52/657 (7%)
Query: 86 DTKPWGPVMRTKVGSRLVELLMQTAYIQ---PPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
DT W + KVGS L+ +M+ A I P Q V AF H +R + +E
Sbjct: 590 DTATWDDSVTIKVGSVLISFVMKHALIHIDTPTGKQAVQ-------AFRHGYRPLQREP- 641
Query: 143 KTGRKFGIIECDPLILKGL---DRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVM 198
RK G+IE +L L + + ++P + PMLVPP WT Y+ GG+L VM
Sbjct: 642 ---RKVGVIELHKSVLNLLLANESDLRETILPRFQPMLVPPRPWTAYNSGGYLRPRGLVM 698
Query: 199 RTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
R G + Q EA+K K L VF L+ LG T WR+N+ VL VV+++W +GG +A LV
Sbjct: 699 RVRGSRLQLEALK---KGDLSEVFAGLNALGATPWRINRPVLDVVEKLWRAGGDIAGLVA 755
Query: 259 RDDVPLPE--------EPDTDDEAQIXXXXXXXXXXX-----XENRERYSQRCDIELKLA 305
R D+ LP PD + A NRER++ RC++ +L
Sbjct: 756 RADLQLPALAESVVDPAPDGKESAASTESLSREQRRAIWRIRKTNRERHALRCELHYRLE 815
Query: 306 VARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFAD-GRPLGKSGRQWLK 364
AR+ D FY PHN+DFRGRAYPM HL+H+ SDVCRG+L FA G +G+ G W+K
Sbjct: 816 TAREFADVSRFYLPHNLDFRGRAYPMPSHLHHMSSDVCRGLLTFAGPGLRVGERGLFWMK 875
Query: 365 IHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPL--EGRRWWLNAEDPFQCLAVCI 422
+HLANL G+DKL + RV+F ES + + A P WW EDPFQ LA C
Sbjct: 876 VHLANLC--GMDKLPFDERVAFAESVMPKVLAVAAAPTADSNLEWWAQQEDPFQLLAACF 933
Query: 423 TLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 482
L A P+ + S +P+ QDGSCNGLQHYAALGRD+ G VNL+ E+P DVYSG+
Sbjct: 934 ELAAAKGGLDPD-YHSTLPIQQDGSCNGLQHYAALGRDERGGYQVNLLPSERPQDVYSGV 992
Query: 483 AARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 542
A V + + DA++ I A+ L ++ RK+VKQTVMTSVYGVT IGAREQI+ R
Sbjct: 993 AELVRERVAHDAREGVPI------AQLLQGRISRKIVKQTVMTSVYGVTLIGAREQIQNR 1046
Query: 543 LKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ---PVR 599
L+E F ++ K + AS Y AK TL +L ++F+GA M WL ECA +A+ + VR
Sbjct: 1047 LRELPDFPEE-KTWEASFYLAKQTLGSLGDIFRGATDTMEWLAECALRVATSKERTNAVR 1105
Query: 600 WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKR--QRTAFPPNFVHSLDGSH 657
W TPLGLPV+QPYR+ ++ T +Q + L+ + D + V R QR+AFPPN++HSLD +H
Sbjct: 1106 WITPLGLPVIQPYRRREARLVNTVVQHVLLEAQNDHLPVSRARQRSAFPPNYIHSLDSTH 1165
Query: 658 MMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
M+MTA+AC++AGL FA VHDS+WTHA VD+MNR+LR FV L+ +L+ L E FQ
Sbjct: 1166 MLMTALACRRAGLQFAAVHDSFWTHAATVDEMNRLLRECFVRLHARDLLQELREQFQ 1222
>H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0C03560 PE=3 SV=1
Length = 1284
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/655 (42%), Positives = 392/655 (59%), Gaps = 49/655 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R KVGS LV +L+ A ++ P + Q + G+ PAF HS++
Sbjct: 524 WPQSIRAKVGSILVSILIHVAKVEIEGIDPITHQKIFGTA---PAFSHSYQY------HN 574
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+I +++ LD R ++ +PMLV P W + GG+ + S ++R+
Sbjct: 575 GSKLGVIRIHKSLVQQLDGERLMASVQPQLLPMLVEPRPWVNWKSGGYYYTQSTLVRSKD 634
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL--VDR 259
+Q ++ A Q L+ V++ L+ LG T W VN+++ ++ ++W GG ++ + +
Sbjct: 635 SPEQIAYLEAASNVQALDKVYDGLNVLGDTAWTVNRRIFEIISKVWNKGGSFLEIPGIQQ 694
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
+ LP P D + I + S RCD+ KL +AR E FY+P
Sbjct: 695 ESEFLPPPPKNADPSVINEWKNKNKILANKYSSNRSMRCDLNYKLEIARAFLGER-FYFP 753
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LGK G WLK+HL+NLY GVDK+
Sbjct: 754 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKRLGKEGLSWLKVHLSNLY--GVDKVP 811
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRR-WWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
L R +F + H+++I DSA+ PL G+ WW A+ P+Q LA CI L EAL+ +PE FIS
Sbjct: 812 LLERENFIDDHLEEIKDSAENPLNGKYLWWQKADKPWQALATCIELNEALKLENPEDFIS 871
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
H PVHQDG+CNGLQHYAALG D GA VNLV GEKP DVY+ +A V +R QKDP
Sbjct: 872 HQPVHQDGTCNGLQHYAALGGDIEGAQQVNLVPGEKPNDVYAHVAKIVQGKLRETLQKDP 931
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA 558
D + A+ LV++++RK+VKQTVMT VYGVT +GA QI ++L D+F D +
Sbjct: 932 N---DEM-AKFLVDKLNRKVVKQTVMTHVYGVTLLGATLQIDKQL--NDLFDDSSDSMKY 985
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRW 600
S Y A+ A+ E F+GA I +WLG C+K ++ N+P V W
Sbjct: 986 SKYLARHVFAAIRESFEGAHLIQDWLGVCSKKLSKSIRLDVDEKSFKNGNKPEFMTSVIW 1045
Query: 601 TTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHM 658
TTPLGLP+VQPYR+L + I+T+LQ + + ++V +RQ+ FPPNF+HSLD SHM
Sbjct: 1046 TTPLGLPIVQPYRQLSKKQIETNLQSVFISDPFAVNQVNARRQKAGFPPNFIHSLDASHM 1105
Query: 659 MMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
+++A C + GL FA VHDSYWTHACDV MN+ LR +FV+L+E ++E L E F
Sbjct: 1106 LLSASECHKDGLVFASVHDSYWTHACDVSKMNKHLREQFVKLHEVDLIERLKEEF 1160
>D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_60184 PE=3 SV=1
Length = 1086
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/696 (40%), Positives = 407/696 (58%), Gaps = 69/696 (9%)
Query: 69 MKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDI 126
++++++AA R + + T PW R +VG L++ LM TA +Q + DG +
Sbjct: 248 LQERRVAAARLMEDGEAWTAPWSVHTRARVGGVLIDCLMDTAKVQRTAVDKNDGKILTEE 307
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTG 184
+PAF HS+ V G++ G+I+ + + + + + V P ++PMLV P W
Sbjct: 308 QPAFYHSYEYVQ------GQRLGVIKLNQEVAAHMANEWTIDTVHPRHLPMLVKPKPWLN 361
Query: 185 YDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVV 243
Y+ GG+L+ +Y MR G ++Q+ +K A Q E V+ LD LG T W++N+K+ VV
Sbjct: 362 YNDGGYLYHKTYAMRFKGSREQQAYLKHASDAGQCELVYAGLDVLGSTPWKINRKIFDVV 421
Query: 244 DRIWASGGRLADLVDRD-DVPLPE--EPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDI 300
+W G R L D P PE PD D + + + +S RC +
Sbjct: 422 LEVWNRGDRWGKLPPATFDEPEPEALSPDADSRKRADWSHAMKLYNQAK-QSNHSHRCSV 480
Query: 301 ELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGR 360
K+ +AR E FY PHN+DFRGRAYP+ PHLNH+G D+ RG+L FA+ +PLG+ G
Sbjct: 481 NYKIEIARTFLGE-TFYQPHNLDFRGRAYPVPPHLNHIGDDLSRGLLMFAEKKPLGERGF 539
Query: 361 QWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAV 420
+WLKIH+ANLY G DK S + RV + E + D++DSA+ P+ G+RWWL A+DP+QCLA
Sbjct: 540 RWLKIHIANLY--GFDKASFDERVQWVEDRLADVYDSANNPINGKRWWLEADDPWQCLAA 597
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
+ L +A+ S +P F S +PVHQDG+CNGLQHYAALG D GAA VNL ++P+DVY+
Sbjct: 598 SMELRDAIESGNPLAFESSLPVHQDGTCNGLQHYAALGGDPEGAAQVNLQKADRPSDVYT 657
Query: 481 GIAARVLDIMRSDAQK-DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQI 539
+ V IM D +K DP A L ++ RK+VKQTVMT+VYGVT+IGAR+QI
Sbjct: 658 YVGRMVERIMEEDEKKGDPM-------AILLKGKISRKVVKQTVMTTVYGVTFIGARDQI 710
Query: 540 KRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA------- 592
+R+L++R + +GA+ Y A+ L + ++F GA+ IM WL CA++IA
Sbjct: 711 ERQLRDRKDIPPE-HCWGAATYLARKVLACIGDLFYGAKHIMTWLNLCARLIAKSIPMDR 769
Query: 593 ------SENQ---------------------------PVRWTTPLGLPVVQPYRKLGRHI 619
+EN+ V WTTP+GLP+ QPYRK R
Sbjct: 770 LQEMIVAENEQAKAKQDKRKRKDLGSKHKVLKREQMTSVVWTTPMGLPIAQPYRKATRKQ 829
Query: 620 IKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHD 677
+KT+LQ ++T +V +Q TAFPPNF+HSLD +HMM+TA+ C+Q GL FA VHD
Sbjct: 830 VKTALQTVLITDPNSLAEVNSSKQATAFPPNFIHSLDATHMMLTALECRQQGLTFASVHD 889
Query: 678 SYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
SYWTHAC +D M+ I+R F+ L+ + +L L + F
Sbjct: 890 SYWTHACSIDQMSGIIRDTFIALHSSDVLMRLHKEF 925
>J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_07409 PE=3 SV=1
Length = 1324
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/684 (41%), Positives = 404/684 (59%), Gaps = 66/684 (9%)
Query: 79 GIMKDQND------TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAF 130
GI+ +D T W +++ VGS LV+ L++ A ++ + G +++PAF
Sbjct: 513 GILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGEIITELQPAF 572
Query: 131 VHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKG 188
H++ V G+K G+I+ +P++ L + +VI ++PMLV P WT ++KG
Sbjct: 573 THAYEYVR------GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKG 626
Query: 189 GHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIW 247
G+L VMR +Q++ +K A ++ LEPVF LD L T WRVN++V VV W
Sbjct: 627 GYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNRRVFDVVLESW 686
Query: 248 ASGGRLADLVDRDD---VPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIEL 302
G +AD+ +D PE+PD+ D+ + R+ +++RC
Sbjct: 687 NRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQYVEKTKAVLAQQRKDHAERCKFNY 746
Query: 303 KLAVARK-MKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQ 361
+ +AR +KD FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +
Sbjct: 747 NIEIARSYLKD--IFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLK 804
Query: 362 WLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVC 421
WL+IHLAN+Y G DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C
Sbjct: 805 WLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATC 862
Query: 422 ITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSG 481
L ALRS +P + S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G
Sbjct: 863 FELAAALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG 922
Query: 482 IAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKR 541
V+DI+ ++D D A + + RK+VKQTVMT+VYGVT++GAR+QI +
Sbjct: 923 ----VVDIVNKVVEEDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAK 976
Query: 542 RLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR-- 599
+L R + + +F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 977 QLHARGDIAQE-HIFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRVQ 1035
Query: 600 ----------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ- 630
WTTPLGLPVVQPYRK + I T+LQ + +
Sbjct: 1036 EAATNLTSTSRTGKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISD 1095
Query: 631 -RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDM 689
+V ++Q TAFPPNF+HSLD +HM++TA+ CKQ +AFA VHDSYWTHA V+ M
Sbjct: 1096 PNAPSEVSPQKQATAFPPNFIHSLDATHMLLTALKCKQNNVAFASVHDSYWTHAATVEKM 1155
Query: 690 NRILRGKFVELYETPILENLLEGF 713
+ ++R FVEL+ ++ L E F
Sbjct: 1156 SDLIRDTFVELHSQDLVGKLREDF 1179
>B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686)
GN=LACBIDRAFT_248757 PE=3 SV=1
Length = 960
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/687 (40%), Positives = 402/687 (58%), Gaps = 56/687 (8%)
Query: 69 MKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSP--DI 126
++K+++AA R + + T PW +R+K+G LVE LM AY++ D V G +
Sbjct: 161 LQKRRMAAARHMQDGEAWTTPWSQAVRSKIGGILVECLMDVAYVRRQRDDQVTGKSVTED 220
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGL--DRSAKNMVIPYMPMLVPPVNWTG 184
+PAF H++ V G K GI++ +P + + L DR + + ++PMLVPP W
Sbjct: 221 QPAFYHAYEYVR------GTKLGILKLNPAVAERLSTDRLRETIHPRHLPMLVPPKPWMH 274
Query: 185 YDKGGHLFLPSYVMR-THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVV 243
+GG+L+ + VMR ++Q+ K ++E V LD LG T WR+NK V VV
Sbjct: 275 IRQGGYLYNKTSVMRFKESIEQETYLQKAIDDGKMELVLAGLDVLGSTPWRINKNVYEVV 334
Query: 244 DRIWASGGRLADLVDR-DDVPLPEEPDT-DDEAQIXXXXXXXXXXXXENR-ERYSQRCDI 300
++W SG R+ + D P PE P+ + + Q + + +S+RC++
Sbjct: 335 LKVWNSGERMGKIPPAVYDQPAPEIPENYEKDLQARSVHLQRQKSYTQGKANNHSERCNV 394
Query: 301 ELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGR 360
K+ +AR +E Y PHN+DFRGRAYP+ PHL+H+G D+CRG+L FAD +PLG+ G
Sbjct: 395 NYKIEIARAFLHDE-LYMPHNLDFRGRAYPIPPHLSHIGDDLCRGLLLFADAKPLGERGL 453
Query: 361 QWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAV 420
WLKIHLANLY G DK S + R + +DDI DSA PL+G+RWW +DP+Q LA
Sbjct: 454 WWLKIHLANLY--GYDKASFQERADWVMERLDDIADSATNPLDGKRWWTKGDDPWQVLAA 511
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
C+ L AL+S P ++S +PVHQDG+CNGLQHYAALG D +GA VNL AG++P+DVYS
Sbjct: 512 CMELHAALQSEDPLAYMSTLPVHQDGTCNGLQHYAALGGDAVGAKQVNLAAGDRPSDVYS 571
Query: 481 GIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIK 540
+ V + +DA + A+ L ++ RK+VKQTVMT+VYGVT++GAREQI+
Sbjct: 572 YVGRLVDQQIEADAANGLEM------AKLLQGKITRKVVKQTVMTTVYGVTFVGAREQIE 625
Query: 541 RRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR- 599
++LK+R D+ + A+ Y AK LT + + F GA+ I NWL CA++I+ P R
Sbjct: 626 KQLKDRHDIPDEL-CWTAASYLAKKVLTCIGDTFTGAKHIQNWLNLCARLISKSIAPDRF 684
Query: 600 -----------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ 630
WTTPL LP++QPYRK R + T++Q + +
Sbjct: 685 IDAIAAPKKRGRPAVAMSRFKKEQMTSVVWTTPLQLPIIQPYRKHARKQVMTAVQSVFIS 744
Query: 631 RETDKVMVK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDD 688
+ V +Q +AFPPNF+HSLD +HMM+TA+ C GL FA VHDSYWTHA +D
Sbjct: 745 DPSSPAEVNSLKQASAFPPNFIHSLDATHMMLTALECHSRGLTFASVHDSYWTHASTIDS 804
Query: 689 MNRILRGKFVELYETPILENLLEGFQK 715
M ++R F+ L+ + +L L E F++
Sbjct: 805 MAEVIRDTFILLHSSDVLGKLHEEFKE 831
>D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniella heveanensis
GN=RPO41 PE=3 SV=1
Length = 1256
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/670 (40%), Positives = 395/670 (58%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI--RPAFVHSFRTVTKEAKKT 144
T PW + + VGS LV+ L++ A ++ G + +PAF H++ +
Sbjct: 436 TPPWSQMAQLGVGSELVDALLKVAKVERVGRNPETGEEVVEEQPAFTHAYEYIR------ 489
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L R + +VI ++PMLV P WT ++ GG+L +MR
Sbjct: 490 GKKLGVIKHNPVVAARLARDSVGVVIHPKHLPMLVEPKPWTSHNNGGYLLHSVPIMRYKE 549
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VD 258
+Q+ +K A ++ LEPVF LD L T W +N+KV V+ +W SG +AD+ +
Sbjct: 550 SAEQQSYLKTASEQGHLEPVFHGLDVLSSTAWSINRKVFDVILNVWNSGEAIADIPASEE 609
Query: 259 RDDVPLPEEPDTDDE--AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ +PE+PD D+ + R+ +++RC L +AR ++ F
Sbjct: 610 KSTYDVPEKPDPRDQDPQKRSLYIERMKSVMAAQRKDHAERCKFNYNLEIARSYLND-VF 668
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
Y PHN+DFRGRAYP+ PHL+ +G D+CRG+L F + + LG++G +WL IHLAN+Y G D
Sbjct: 669 YLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNKKALGETGLKWLHIHLANVY--GFD 726
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
K S E R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C + ALRSS P +
Sbjct: 727 KASFEERARFAQEHEADIFDSADNPLDGKRWWLQAEDPWQCLATCFEIAAALRSSDPTQY 786
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
S +P+HQDG+CNG+QHYAALG D GA AVNL G++PAD+Y+G+ V ++ D +K
Sbjct: 787 ESSLPIHQDGTCNGMQHYAALGGDVRGAKAVNLEHGDRPADIYTGVVNIVNKVIEEDQKK 846
Query: 497 DPAIFPDALHARTLVNQ-VDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
L L+ + + RK+VKQTVMT+VYGVT++GAREQI ++L R F+ + +
Sbjct: 847 -------GLDVALLIKKPLGRKVVKQTVMTTVYGVTFVGAREQIAKQLTARGDFAQE-HV 898
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL AK+I+ P R
Sbjct: 899 FLVSGYIAKTVLNCIGDLFSGAKAIMDWLTTSAKLISRSVPPERVEEAANNLTTTLRNGK 958
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 959 VKSRAAREFMTSVVWTTPLGLPVVQPYRKAQKKQIMTALQTVYISDPNAPSEVSPQKQAT 1018
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ C+Q +AFA VHDSYWTHA V+ M+ ++R F+ L+
Sbjct: 1019 AFPPNFIHSLDATHMLLTALKCRQNEIAFASVHDSYWTHASTVESMSDLIRDTFIHLHSQ 1078
Query: 704 PILENLLEGF 713
++ L + F
Sbjct: 1079 DLVGELRDEF 1088
>M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna polymerase
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_4440
PE=4 SV=1
Length = 1399
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/670 (41%), Positives = 395/670 (58%), Gaps = 69/670 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTA-----YIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ KVGS L+E L++ A + P +++ V ++PAF H+ + +
Sbjct: 549 WSVGIKAKVGSFLLESLLKVAKVPVTMVHPETNETVT---QMQPAFSHA------QQYRM 599
Query: 145 GRKFGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-HG 202
GRK G+I + +I++ L R +++ ++PMLV P WTG+ GG L P VMR +G
Sbjct: 600 GRKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLKHPGRVMRVKNG 659
Query: 203 VKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV-DRD 260
QR A + L VF+ L+ LG WR+N+ V ++ W SG +A+L D+
Sbjct: 660 DADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIMLEAWNSGDAIANLAPDKP 719
Query: 261 DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER--YSQRCDIELKLAVARKMKDEEAFYY 318
+ P EP+T + + EN + +SQRC +L +AR ++D+ FY+
Sbjct: 720 KLDYPPEPETSSDP-LERRRWVTAVKKVENSKSSFHSQRCFQNFQLEIARALRDK-TFYF 777
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHNVDFRGRAYP+ P+LNH+G+D CRG++ F G+ LG SG +WLK+HLAN+Y G DK
Sbjct: 778 PHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWLKVHLANVY--GFDKA 835
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
SL+ R F ++D+I+DSA PL G+RWWL AEDP+QCLA C+ AL S P +F+S
Sbjct: 836 SLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACMEFKNALESGDPASFVS 895
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
++PVHQDG+CNGLQHYAALG D GA VNL G++PADVY+ +A D+++ KD
Sbjct: 896 YLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVA----DLVKESIAKD- 950
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL--KERDVFSDDTKLF 556
+ A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++L +D+ +D
Sbjct: 951 -LLAGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHKDLPDNDEINP 1009
Query: 557 GA-SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP------------------ 597
G + Y TAL MF+GA I WLG+CA I++ P
Sbjct: 1010 GTLASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQIERIVAQASEQEGRPS 1069
Query: 598 ----------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVK 639
V WTTPL LPVVQPYR +++T+LQ+L+L +D V +
Sbjct: 1070 KRAALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLVRTNLQLLSLSEPHRSDPVSSR 1129
Query: 640 RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVE 699
+Q AFPPNF+HSLD +HM+++AV C +A LAFA VHDS+WTHA D+D MN LR F+E
Sbjct: 1130 KQLQAFPPNFIHSLDATHMLLSAVKCNEAKLAFAAVHDSFWTHAADIDTMNTFLRDAFIE 1189
Query: 700 LYETPILENL 709
++ ++ L
Sbjct: 1190 IHSDDVIGRL 1199
>G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryotinia fuckeliana
(strain T4) GN=BofuT4P0000045001 PE=3 SV=1
Length = 1399
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/670 (41%), Positives = 395/670 (58%), Gaps = 69/670 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTA-----YIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ KVGS L+E L++ A + P +++ V ++PAF H+ + +
Sbjct: 549 WSVGIKAKVGSFLLESLLKVAKVPVTMVHPETNETVT---QMQPAFSHA------QQYRM 599
Query: 145 GRKFGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-HG 202
GRK G+I + +I++ L R +++ ++PMLV P WTG+ GG L P VMR +G
Sbjct: 600 GRKLGVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLKHPGRVMRVKNG 659
Query: 203 VKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV-DRD 260
QR A + L VF+ L+ LG WR+N+ V ++ W SG +A+L D+
Sbjct: 660 DADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIMLEAWNSGDAIANLAPDKP 719
Query: 261 DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER--YSQRCDIELKLAVARKMKDEEAFYY 318
+ P EP+T + + EN + +SQRC +L +AR ++D+ FY+
Sbjct: 720 KLDYPPEPETSSDP-LERRRWVTAVKKVENSKSSFHSQRCFQNFQLEIARALRDK-TFYF 777
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHNVDFRGRAYP+ P+LNH+G+D CRG++ F G+ LG SG +WLK+HLAN+Y G DK
Sbjct: 778 PHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRWLKVHLANVY--GFDKA 835
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
SL+ R F ++D+I+DSA PL G+RWWL AEDP+QCLA C+ AL S P +F+S
Sbjct: 836 SLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACMEFKNALESGDPASFVS 895
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
++PVHQDG+CNGLQHYAALG D GA VNL G++PADVY+ +A D+++ KD
Sbjct: 896 YLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVA----DLVKESIAKD- 950
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL--KERDVFSDDTKLF 556
+ A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++L +D+ +D
Sbjct: 951 -LLAGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHKDLPDNDEINP 1009
Query: 557 GA-SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP------------------ 597
G + Y TAL MF+GA I WLG+CA I++ P
Sbjct: 1010 GTLASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQIERIVAQASEQEGRPS 1069
Query: 598 ----------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVK 639
V WTTPL LPVVQPYR +++T+LQ+L+L +D V +
Sbjct: 1070 KRAALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLVRTNLQLLSLSEPHRSDPVSSR 1129
Query: 640 RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVE 699
+Q AFPPNF+HSLD +HM+++AV C +A LAFA VHDS+WTHA D+D MN LR F+E
Sbjct: 1130 KQLQAFPPNFIHSLDATHMLLSAVKCNEAKLAFAAVHDSFWTHAADIDTMNTFLRDAFIE 1189
Query: 700 LYETPILENL 709
++ ++ L
Sbjct: 1190 IHSDDVIGRL 1199
>Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/670 (41%), Positives = 400/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T W++N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_I1030W
PE=3 SV=1
Length = 1180
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/670 (41%), Positives = 400/670 (59%), Gaps = 60/670 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W +++ VGS LV+ L++ ++ + G +++PAF H++ V
Sbjct: 405 TPAWSRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYEYVR------ 458
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVI--PYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ +P++ L + +VI ++PMLV P WT ++KGG+L VMR
Sbjct: 459 GKKLGVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKE 518
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q++ +K A ++ LEPVF LD L T W++N++V VV W G +AD+ +D
Sbjct: 519 SLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPPSED 578
Query: 262 ---VPLPEEPDTDDE-AQIXXXXXXXXXXX-XENRERYSQRCDIELKLAVARK-MKDEEA 315
PE+PD+ D+ Q+ + R+ +++RC + +AR +KD
Sbjct: 579 KAHYEFPEKPDSSDQDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYLKD--T 636
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY PHN+DFRGRAYP+ PHL+ +G D+CRG+L F +PLG++G +WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK S R F + H DIFDSAD PL+G+RWWL AEDP+QCLA C L ALRS +P
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
+ S +PVHQDG+CNG+QHYAALG D GA AVNL AG++PAD+Y+G V+DI+ +
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTG----VVDIVNKVVE 810
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+D D A + + RK+VKQTVMT+VYGVT++GAR+QI ++L R + + +
Sbjct: 811 EDKKAGHDI--ALLIKEPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQE-HI 867
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
F S Y AK L + ++F GA++IM+WL A++I+ P R
Sbjct: 868 FVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 600 --------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRT 643
WTTPLGLPVVQPYRK + I T+LQ + + +V ++Q T
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHKKQIMTALQSVYISDPNAPSEVSPQKQAT 987
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HM++TA+ CKQ LAFA VHDSYWTHA V+ M+ ++R FVEL+
Sbjct: 988 AFPPNFIHSLDATHMLLTALKCKQNNLAFASVHDSYWTHAATVEKMSDLIRDTFVELHSQ 1047
Query: 704 PILENLLEGF 713
++ L E F
Sbjct: 1048 DLVGKLREDF 1057
>E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr10944 PE=3 SV=1
Length = 1551
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 296/713 (41%), Positives = 419/713 (58%), Gaps = 80/713 (11%)
Query: 61 LRKK-VIDLMKKQKIAAVRGIMKDQ---NDTKPWGPVMRTKVGSRLVELLMQTAYI-QPP 115
LRK+ +IDL +++I A + +++ + W +R +VGS LV+ LM A + +
Sbjct: 695 LRKRGLIDLAARREIKAWQMQQEEEGVLSSIPRWTQPVRARVGSYLVQHLMHVATVNRKA 754
Query: 116 SDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP- 171
+D+ DG + +PAF +++ + G+K G+I+ + +I K LD+ S + + P
Sbjct: 755 TDR--DGVLWEEDQPAFYSTYQYLG------GKKLGVIKLNEVIAKRLDKDSIQETLHPR 806
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGH 230
++PMLVPP WT +D GG+ + MR +Q ++ A L+ V ALD LG+
Sbjct: 807 HLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLAALDVLGN 866
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
T W++NK + V+ +W SG LAD+ + D P P++PD D +
Sbjct: 867 TSWKINKPIFDVMLEVWNSGEDLADMPPIEMDAPEPQKPDNYDH-DMKARSVYLQRLKQW 925
Query: 290 NRER---YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
N++R +SQRCD+ KL +AR E FY+PHN+DFRGRAYPM PHLNH+G+D+CRG+
Sbjct: 926 NQQRASNHSQRCDVNYKLEIARAYVGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGL 984
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
L FAD +PLGK+G +WL+IH++N++ G DK S R F H DI DS ++PL+G R
Sbjct: 985 LMFADSKPLGKAGLRWLRIHISNVF--GYDKASFAEREQFAIDHEADIRDSVERPLDGNR 1042
Query: 407 WWLNAEDPFQCLAVCITLTEALRS-SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAA 465
WWL A+DP+QCLA C+ L AL PE + S +PVHQDG+CNGLQHYAALG D GA
Sbjct: 1043 WWLKADDPWQCLASCMELKAALEHPEGPEAYESSLPVHQDGTCNGLQHYAALGGDLAGAK 1102
Query: 466 AVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMT 525
VNL GEKPADVYSG+A V+ ++ +A K + A L +V RK+VKQTVMT
Sbjct: 1103 QVNLSRGEKPADVYSGVADLVIKVLDDEAAKGDRL------ASILQGKVTRKVVKQTVMT 1156
Query: 526 SVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWL 584
+VYGVT+IGA+ Q+ R+L +R DV ++D LF A+ + AKV ++ + +F GA+ I +WL
Sbjct: 1157 TVYGVTFIGAKNQVMRQLADRGDVPAED--LFAAASHLAKVIMSCIGNLFSGAQKIQDWL 1214
Query: 585 GECAKVIA------------------------------------------SENQPVRWTT 602
AKVIA + V WTT
Sbjct: 1215 SFSAKVIAKSIPAQRLEEATRPYMPSETALKRADARGFSRDPAKADRIVKEQMTSVIWTT 1274
Query: 603 PLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMMM 660
LGLPVVQPYRK + + T++Q + + +V +Q +AFPPNF+HSLD +HM++
Sbjct: 1275 ALGLPVVQPYRKSKKKQVSTAMQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDATHMIL 1334
Query: 661 TAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
TA+ C AGL FA VHDSYWTHA D+D M+ ++R FV L+ IL L E F
Sbjct: 1335 TALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILHRLREEF 1387
>H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytophthora ramorum
PE=3 SV=1
Length = 999
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 306/786 (38%), Positives = 424/786 (53%), Gaps = 100/786 (12%)
Query: 11 AMGATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMK 70
A G + CLM + + KF++ + A + + K ++ +
Sbjct: 194 ATGMNIMLNMCLM-EAKGPKFIKLALAMGKAVQEEIITRKEAMAKRNNGDADKFYLNATE 252
Query: 71 KQKIAAVRGIMKDQNDT-KPWGPVMRTKVGSRLVELLMQTAYI-------QPPSDQIVDG 122
K+ +++ MKD DT W ++ KVG+ +V+ + +T Y+ P G
Sbjct: 253 YIKLESLKTRMKDYIDTVGGWDKRLQLKVGAAVVDCIQRTCYVPNEFGDVSTPELCAAKG 312
Query: 123 SPDIRPAFVHSFRTVTKEAKKTGRKFGIIE-----CDPLILKGLDRSAKNMVIPYMPMLV 177
P PAF+H++ R+ G+I+ D ++ D + Y+PMLV
Sbjct: 313 LPAPEPAFIHNY------VFDRNRRAGVIQIHQKMADTVLATSPDANVLPWTARYLPMLV 366
Query: 178 PPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNK 237
PP W G GG+L L + +MR Q + V+R + + AL+ + W +NK
Sbjct: 367 PPRPWDGIVNGGYLKLRTKIMRQRDSAWQMDCVQRG---DMGGILTALNLMADVPWVINK 423
Query: 238 KVLSVVDRIWASGGRLADLVDRDDVPLP--EEPDTDDEAQIXXXXXXXXXXXXE------ 289
+VL+VV ++W GG DL R DVPLP E P+ ++ +
Sbjct: 424 EVLNVVLQVWEDGGNFGDLPTRTDVPLPDPESPEFKEDPALYYKNVRKNQAHMMTPYVMW 483
Query: 290 --------------------NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAY 329
NRE +S RCD KL VA + KDE A YYP+N+DFRGR Y
Sbjct: 484 VQTACKSKRLLLGGWWIEQLNREFHSLRCDTLYKLQVAEEFKDEPALYYPYNMDFRGRVY 543
Query: 330 PMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTES 389
P+ P+LNHLGSD+ R +L F D +PLG+ G +W+KIHLAN++ GVDK S + RV F ++
Sbjct: 544 PIPPNLNHLGSDLSRSLLIFRDRKPLGEHGLRWMKIHLANVF--GVDKCSFDERVVFADA 601
Query: 390 HVDDIFDSADKPL-EG-RRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGS 447
H+D + SA PL EG WW A+ PF L VC L A+ S P + S+IP+HQDGS
Sbjct: 602 HLDKVMASASDPLGEGDSAWWKGADYPFLALGVCFELKRAIESPDPTQYESNIPIHQDGS 661
Query: 448 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD-PAI------ 500
CNGLQHYAALGRD+ G VNLV +P+DVY G+A +V+ + DA+ D P++
Sbjct: 662 CNGLQHYAALGRDRRGGEQVNLVPAPRPSDVYMGVATQVMAKVEHDAEVDLPSVEEVRAM 721
Query: 501 ---FPD---------ALHARTLVNQ-------------VDRKLVKQTVMTSVYGVTYIGA 535
PD RTL++Q + RK+VKQTVMTSVYGVTYIGA
Sbjct: 722 IADVPDDNSQESLSRKTKLRTLLDQAQRKKNAQFLHGIITRKVVKQTVMTSVYGVTYIGA 781
Query: 536 REQIKRRLKER---------DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
R+QI RL E + DD ++ ASCY A++T+ ++ ++F ARSIM WL +
Sbjct: 782 RKQISARLHETFLTKGHIMDEKLEDD--IYHASCYCAELTMGSMGDLFNSARSIMAWLAK 839
Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQ-MLTLQRETDKVMVKRQRTAF 645
CA + QP+ W TPLGLPVVQPYR ++T +Q +L + E V + RQ++AF
Sbjct: 840 CAAKVGESGQPMSWITPLGLPVVQPYRSKSTKQVRTKVQHVLMVDNEGRPVSIGRQKSAF 899
Query: 646 PPNFVHSLDGSHMMMTAVAC-KQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETP 704
PPNFVHSLD +HMM+TA C + +AFA VHDSYWTHAC VD MNR LR +FV LYE P
Sbjct: 900 PPNFVHSLDSTHMMLTARRCLEDDNIAFAAVHDSYWTHACSVDTMNRRLREEFVGLYEQP 959
Query: 705 ILENLL 710
+LE+LL
Sbjct: 960 LLEDLL 965
>G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotorula glutinis
(strain ATCC 204091 / IIP 30 / MTCC 1151) GN=RTG_02653
PE=3 SV=1
Length = 1343
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/673 (41%), Positives = 404/673 (60%), Gaps = 70/673 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R +VGS LV LM+ A ++ P + + V + +PAF H+++ +
Sbjct: 549 WTQTIRARVGSVLVSALMEIAEVERTIKHPKTGEQVS---EKQPAFSHAYQYMR------ 599
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIP--YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K GII+ +P + + LD+ ++ + ++PMLV P W ++ G +L + +MRT
Sbjct: 600 GTKLGIIKLNPAVSERLDKDPLDITLHPRFLPMLVKPKPWLTWNSGAYLLHQTPMMRTKE 659
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VD 258
++Q + +++A L+ +F LDTLG W++N+KV V ++W SG AD+
Sbjct: 660 SEEQVQYLQQASDNHTLDIIFSGLDTLGAVPWKINRKVFDTVVQVWNSGDAFADIPAAAQ 719
Query: 259 RDDVPLPEEPD--TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ ++P E P D + R +S RCD+ KL +AR E F
Sbjct: 720 KLEIPTLEIPKGVMSDPRARDNYRRRVRELMQQKRAAHSMRCDLNYKLEIARAFLGE-TF 778
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
Y+PHN+DFRGRAYP+ P+L+H+G D+ RG+L FA+ +PLG+ G +WLKIH++NL G D
Sbjct: 779 YFPHNLDFRGRAYPIPPNLSHIGDDMSRGLLLFAESKPLGERGLRWLKIHVSNLM--GFD 836
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
K S + R +FT H++D+FDSAD PLEGR+WW A+DP+QCLA CI LT ALRS P +
Sbjct: 837 KASFDEREAFTMEHLEDVFDSADNPLEGRKWWTKADDPWQCLATCIELTNALRSEDPTKY 896
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+P+HQDG+CNGLQHYAALG D GA VNL G++PADVYSG+A V +I+ D +
Sbjct: 897 ECGLPIHQDGTCNGLQHYAALGGDINGARQVNLDIGDRPADVYSGVAQMVQEIITRDVEA 956
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKL 555
A+ L ++ RK+VKQTVMT+VYGVT+IGA+ QI+R+LK+R DV ++ +L
Sbjct: 957 ------GVEEAKLLDGKITRKVVKQTVMTTVYGVTFIGAKNQIERQLKDRGDVPAE--RL 1008
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
+ S Y ++ L ++ ++F+GA +I WL CA++IA P R
Sbjct: 1009 YKCSIYLGRLVLDSIGDLFKGAAAIQTWLNRCARLIAKSIPPQRIEAALKQEKPGKNKSK 1068
Query: 600 -----------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMV--KR 640
WTTPLGLPV QPYR+ + ++T+LQ + + + V +
Sbjct: 1069 KALALSRIPKEQMTSVVWTTPLGLPVCQPYRRPKKKQVQTALQTVHIWDPSIPAEVDPRA 1128
Query: 641 QRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVEL 700
Q TAFPPNF+HSLD +HMMMTA+ACK +AFA VHDSYWTHACDVD+M+ ILR F++L
Sbjct: 1129 QATAFPPNFIHSLDATHMMMTALACK-GKIAFASVHDSYWTHACDVDEMSTILRDTFIDL 1187
Query: 701 YETPILENLLEGF 713
+ IL L + F
Sbjct: 1188 HSQDILGRLRDEF 1200
>L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillardia theta CCMP2712
GN=RpoTm PE=3 SV=1
Length = 1194
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/641 (43%), Positives = 398/641 (62%), Gaps = 38/641 (5%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFG 149
W M+ KVG++L+++LM +A + GS A H + + + K RK G
Sbjct: 548 WDARMQVKVGAKLIQILMNSAKYK--------GSA----AVTHVVQA--QMSNKGMRKKG 593
Query: 150 IIECDPLILKGLDR-----SAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
+ D IL+ L++ +A N ++ +PM++ P W +D G ++ + VMR
Sbjct: 594 FLALDQEILQDLEKQHDSVAAHNPLL--LPMIIRPFPWMSFDVGCYIQARTKVMRIVDKG 651
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPL 264
Q E+ + L ++ ALD L T W +N+++L+VV W L ++ +DD +
Sbjct: 652 LQEESCR---NHDLSRIYAALDVLSGTGWCINRRLLNVVQHAWLDDMILGEIPQKDDFAV 708
Query: 265 PE-EPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVD 323
PE +PD D A+ N++ +S RC + +L VA M D + F++PHN+D
Sbjct: 709 PELDPDCIDAAESYSQYREKKRVEQRNKDLHSLRCSLINQLHVATTMSDFKEFFFPHNLD 768
Query: 324 FRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGR 383
FRGRAYP+ PHLNHLGSD+CRG+L+F+ +PLGK G WLK+HLANL+ G +K+S + R
Sbjct: 769 FRGRAYPIPPHLNHLGSDICRGLLKFSKKKPLGKKGFYWLKVHLANLF--GENKISYDDR 826
Query: 384 VSFTESHVDDIFDSADKPLE--GRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
V +TE + I SA PL+ R++WL+A+DP+Q LA + + EA+ S P T++S++P
Sbjct: 827 VKWTEERMSQILHSAKNPLDSASRKFWLSADDPWQALATSMEIQEAIESGDPSTYLSNLP 886
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
VHQDGSCNGLQHYAALG D++G VNLV GEKP+D Y+ + RVL+ + D +DP+
Sbjct: 887 VHQDGSCNGLQHYAALGLDEIGGEQVNLVPGEKPSDPYTTVCNRVLEALDMDL-RDPS-S 944
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFS-----DDTKLF 556
D ++ + +V RK+VKQTVMT+VYGVT+IGAREQI RL E + L+
Sbjct: 945 ADHEVSKLVDKRVSRKVVKQTVMTTVYGVTFIGAREQIYNRLYEAYGIPGTNELQENDLY 1004
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y AK+TL ++ +F GAR M WL AK++AS QPVRWTTPLGLPVVQPY K
Sbjct: 1005 RASMYLAKLTLASVGNIFVGARKTMEWLTSVAKIVASTGQPVRWTTPLGLPVVQPYYKET 1064
Query: 617 RHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAG 674
++T++Q ++L + E + +QRTAFPPNFVHSLD +H++MTA+ + G FAG
Sbjct: 1065 MMSVETAVQNISLLKCDENGPINKLKQRTAFPPNFVHSLDSTHLLMTAIEFDRRGKTFAG 1124
Query: 675 VHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
VHDS+WTHACD +++ +LR +FV LY PIL +L F++
Sbjct: 1125 VHDSFWTHACDYEELALVLREQFVHLYTQPILNDLKNSFER 1165
>Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM02493.1 PE=3 SV=1
Length = 1566
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 296/713 (41%), Positives = 421/713 (59%), Gaps = 80/713 (11%)
Query: 61 LRKK-VIDLMKKQKIAAVRGIMKDQ---NDTKPWGPVMRTKVGSRLVELLMQTAYI-QPP 115
LRK+ +IDL +++I A + +D+ + W +R +VGS LV+ LM A + +
Sbjct: 707 LRKRGLIDLAARREIKAWQKQQEDEGVLSSIPSWTQTVRARVGSYLVQHLMNVATVNRKA 766
Query: 116 SDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP- 171
+D+ DG + +PAF +++ + G+K G+I+ + +I + LD+ S + + P
Sbjct: 767 TDR--DGVLWEEDQPAFYSTYQYLG------GKKLGVIKLNEVIARRLDKDSIQETLHPR 818
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGH 230
++PMLVPP WT +D GG+ + MR +Q ++ A L+ V ALD LG+
Sbjct: 819 HLPMLVPPKPWTSHDSGGYYSVRQSAMRYKDSAEQGSYLRVASDNGDLDTVLAALDVLGN 878
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
T W++NK + V+ +W SG +AD+ + +VP P++PD D I
Sbjct: 879 TSWKINKPIFDVMLEVWNSGKDIADMPPVEMEVPEPQKPDNYDH-DIKARSVYLQRLKQW 937
Query: 290 NRER---YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
N++R +SQRCD+ KL +AR E FY+PHN+DFRGRAYPM PHLNH+G+D+CRG+
Sbjct: 938 NQQRASNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGL 996
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
L FAD +PLGK+G +WL+IH++N++ G DK S R F H DI DS ++PL+G
Sbjct: 997 LLFADSKPLGKAGLRWLRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERPLDGNC 1054
Query: 407 WWLNAEDPFQCLAVCITLTEALR-SSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAA 465
WWL A+DP+QCLA C+ L AL + PE + S +PVHQDG+CNGLQHYAALG D GA
Sbjct: 1055 WWLKADDPWQCLAACMELKAALEHAEGPEAYESCLPVHQDGTCNGLQHYAALGGDLAGAK 1114
Query: 466 AVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMT 525
VNL GE+PADVYSG+A V+ ++ +A K + A L +V RK+VKQTVMT
Sbjct: 1115 QVNLSRGERPADVYSGVADLVIKVLDEEAAKGERL------ASILQGKVTRKVVKQTVMT 1168
Query: 526 SVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWL 584
+VYGVT+IGA+ Q+ R+L +R DV ++D LF A+ + AKV ++ + +F GA+ I +WL
Sbjct: 1169 TVYGVTFIGAKNQVMRQLADRGDVPAED--LFAAASFLAKVIMSCIGNLFSGAQKIQDWL 1226
Query: 585 GECAKVIASE------------NQP------------------------------VRWTT 602
AKVIA QP V WTT
Sbjct: 1227 SFSAKVIAKSIPAQRLEEATRPYQPNESTLKRADARGFSRDPAKADRIVKEQMTSVIWTT 1286
Query: 603 PLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMMM 660
LGLPVVQPYRK + + T++Q + + +V +Q +AFPPNF+HSLD +HM++
Sbjct: 1287 ALGLPVVQPYRKSKKKQVSTAMQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDATHMIL 1346
Query: 661 TAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
TA+ C AGL FA VHDSYWTHA D+D M+ ++R FV L+ IL L E F
Sbjct: 1347 TALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILYRLREEF 1399
>M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosporidium toruloides
NP11 GN=RHTO_03678 PE=4 SV=1
Length = 1343
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/673 (41%), Positives = 404/673 (60%), Gaps = 70/673 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R +VGS LV LM+ A ++ P + + V + +PAF H+++ +
Sbjct: 549 WTQTIRARVGSVLVSALMEIAEVERTIKHPKTGEQVT---EKQPAFSHAYQYMR------ 599
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIP--YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K GII+ +P + + LD+ ++ + ++PMLV P W ++ G +L + +MRT
Sbjct: 600 GTKLGIIKLNPAVSERLDKDPLDITLHPRFLPMLVKPKPWLTWNSGAYLIHQTPMMRTKE 659
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL---VD 258
++Q + +++A L+ +F LDTLG W++N+KV +V ++W SG AD+
Sbjct: 660 SEEQVQYLQQASDNHTLDIIFSGLDTLGAVPWKINRKVFDIVVKVWNSGDAFADIPAAAQ 719
Query: 259 RDDVPLPEEPD--TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ ++P E P D + R +S RCD+ KL +AR E F
Sbjct: 720 KLEIPTLEIPKGVMSDPRARDNYRRRVRELMQQKRAAHSMRCDLNYKLEIARAFLGE-TF 778
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
Y+PHN+DFRGRAYP+ P+L+H+G D+ RG+L FA+ +PLG+ G +WLKIH++NL G D
Sbjct: 779 YFPHNLDFRGRAYPIPPNLSHIGDDMSRGLLLFAESKPLGERGLRWLKIHVSNLM--GFD 836
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
K S + R +FT H++D+FDSAD PLEGR+WW A+DP+QCLA CI +T ALRS P +
Sbjct: 837 KASFDEREAFTMEHLEDVFDSADNPLEGRKWWTKADDPWQCLATCIEVTNALRSEDPTKY 896
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+PVHQDG+CNGLQHYAALG D GA VNL G++PADVYSG+A V +I+ D +
Sbjct: 897 ECGLPVHQDGTCNGLQHYAALGGDINGARQVNLDIGDRPADVYSGVAQMVQEIITRDMEA 956
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKL 555
A+ L ++ RK+VKQTVMT+VYGVT+IGA+ QI+R+LK+R DV + +L
Sbjct: 957 ------GIEEAKLLDGKITRKVVKQTVMTTVYGVTFIGAKNQIERQLKDRGDVPPE--RL 1008
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR---------------- 599
+ S Y ++ L ++ ++F+GA +I WL CA++IA P R
Sbjct: 1009 YRCSIYLGRLVLDSIGDLFKGAAAIQTWLNRCARLIAKSIPPQRIEAALQQEKPGKNKTK 1068
Query: 600 -----------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMV--KR 640
WTTPLGLPV QPYR+ + ++T+LQ + + + V +
Sbjct: 1069 KALALSRIPKEQMTSVVWTTPLGLPVCQPYRRPKKKQVQTALQTVHIWDPSIPAEVDPRA 1128
Query: 641 QRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVEL 700
Q TAFPPNF+HSLD +HMMMTA+ACK +AFA VHDSYWTHACDVD+M+ ILR F++L
Sbjct: 1129 QATAFPPNFIHSLDATHMMMTALACK-GKIAFASVHDSYWTHACDVDEMSTILRDTFIDL 1187
Query: 701 YETPILENLLEGF 713
+ IL L + F
Sbjct: 1188 HSQDILGRLRDEF 1200
>G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo05575 PE=3
SV=1
Length = 1375
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/684 (41%), Positives = 396/684 (57%), Gaps = 65/684 (9%)
Query: 77 VRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSP--DIRPAFVHSF 134
VR D + W R ++G+ + L +TA IQ ++DG +I+PAFV ++
Sbjct: 578 VRARQGDSSREVFWSHQTRARIGAMCLHFLCETAKIQ--RSAVIDGQEIIEIQPAFVQTY 635
Query: 135 RTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP-YMPMLVPPVNWTGYDKGGHLF 192
+ G+K GII+ + + + LD+ S + + P Y+PMLVPP WT ++KG +L
Sbjct: 636 QF------SAGQKIGIIKFNAAVTERLDKDSMLSTLTPRYLPMLVPPRPWTAHNKGAYLM 689
Query: 193 LPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG 251
P V+R +Q +K+A QL+ F +LD LG T W VN+ V V+ W SG
Sbjct: 690 HPVSVLRIKDSMEQTAYLKQASDSGQLDEAFASLDYLGSTAWNVNRDVFGVIASAWNSGL 749
Query: 252 RL-----ADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAV 306
+ AD ++ P P Q + R+ YS RCD+ KL +
Sbjct: 750 TIGGIPVADPLNAIKDPEPPAGGFTSPRQQDTHRAEVKAAEMQRRQHYSIRCDLNYKLEI 809
Query: 307 ARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIH 366
AR +E FY+PHN+DFRGRAYP+ P+L+H+G D+CRG+L FA+ + LG +G +WL +H
Sbjct: 810 ARAYLNER-FYFPHNMDFRGRAYPIPPNLSHIGDDLCRGLLTFAERKRLGATGLRWLHVH 868
Query: 367 LANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTE 426
LAN++ G DK SL R F + H+ DIFDSADKPL+G RWWL AE+P+QCLA C L++
Sbjct: 869 LANMF--GFDKASLAAREQFAKDHLTDIFDSADKPLDGARWWLKAEEPWQCLATCFELSK 926
Query: 427 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 486
ALRS PE + S +PV QDGSCNGLQHYAALG D GA VNL+AG+ P+DVY+G+ V
Sbjct: 927 ALRSPVPEDYRSSLPVQQDGSCNGLQHYAALGGDMAGAGQVNLIAGDAPSDVYTGVCNLV 986
Query: 487 LDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER 546
+ + DA + ALH L ++ RK++KQTVMT+VYGVTYIGA QI+R+LK+R
Sbjct: 987 IGAVEQDAANKNEL---ALH---LKGKITRKVIKQTVMTTVYGVTYIGASRQIERQLKDR 1040
Query: 547 DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA-------------- 592
+ + + Y + TL ++ +F GA +I WL C ++I+
Sbjct: 1041 GDVDAEVR-HKCALYLTEKTLQSIGTLFAGAAAIQLWLTTCGRLISKSIPGDRHELVKAT 1099
Query: 593 ---SENQPVR------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ- 630
SE ++ WTTP+GLPV QPYRK R +KT +Q + +
Sbjct: 1100 QSKSEQNKLKKKQSSKDMLAREQMTTVVWTTPIGLPVAQPYRKQQRKQVKTVVQTVFISD 1159
Query: 631 -RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDM 689
+ +V ++Q +AFPPNF+HSLD SH+M+TA CK+ GL FA VHDS+WTHA DVD M
Sbjct: 1160 PQTPTQVDSRQQTSAFPPNFIHSLDASHLMLTAGRCKRRGLTFASVHDSFWTHAADVDVM 1219
Query: 690 NRILRGKFVELYETPILENLLEGF 713
LR FV+L+ ILE+L F
Sbjct: 1220 ATELRAAFVDLHAQDILESLRREF 1243
>R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_006120 PE=4 SV=1
Length = 1544
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 296/713 (41%), Positives = 418/713 (58%), Gaps = 80/713 (11%)
Query: 61 LRKK-VIDLMKKQKIAAVRGIMKDQ---NDTKPWGPVMRTKVGSRLVELLMQTAYI-QPP 115
LRK+ +IDL +++I A + +D+ + W +R +VGS LV+ LM A + +
Sbjct: 682 LRKRGLIDLAARREIKAWQKQQEDEGVLSSIPRWTQTIRARVGSYLVQHLMHVATVNRKA 741
Query: 116 SDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP- 171
+D+ DG + +PAF +++ + G+K G+I+ + +I K LD+ S + + P
Sbjct: 742 TDR--DGVLWEEDQPAFYSTYQYLG------GKKLGVIKLNEVIAKRLDKDSIQETLHPR 793
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGH 230
++PMLVPP WT +D GG+ + MR +Q ++ A L+ V ALD LG+
Sbjct: 794 HLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLAALDVLGN 853
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVD-RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
T W++NK + V+ +W SG +AD+ + + P++PD D I
Sbjct: 854 TSWKINKPIFDVMTEVWNSGKDIADMPPVQMEAQEPQKPDNYDH-DIKARSVYLQRLKQW 912
Query: 290 NRER---YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
N++R +SQRCD+ KL +AR E FY+PHN+DFRGRAYPM PHLNH+G+D+CRG+
Sbjct: 913 NQQRASNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGL 971
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
L FAD +PLGK+G +WL+IH++N++ G DK S R F H DI DS ++PL+G R
Sbjct: 972 LLFADSKPLGKAGLRWLRIHISNVF--GYDKASFAEREQFAIDHEADIRDSVERPLDGNR 1029
Query: 407 WWLNAEDPFQCLAVCITLTEALRS-SSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAA 465
WWL A+DP+QCL+ C+ L AL PE + S +PVHQDG+CNGLQHYAALG D GA
Sbjct: 1030 WWLKADDPWQCLSACMELKAALEHPEGPEAYGSCLPVHQDGTCNGLQHYAALGGDLAGAK 1089
Query: 466 AVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMT 525
VNL GE+PADVYSG+A V+ + +A K + A L +V RK+VKQTVMT
Sbjct: 1090 QVNLSRGERPADVYSGVADLVIKALDEEAAKGERL------AGILQGKVTRKVVKQTVMT 1143
Query: 526 SVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWL 584
+VYGVT+IGA+ Q+ R+L +R DV ++D LF A+ Y AKV ++ + +F GA+ I +WL
Sbjct: 1144 TVYGVTFIGAKNQVMRQLADRGDVPAED--LFAAASYLAKVIMSCIGNLFSGAQKIQDWL 1201
Query: 585 GECAKVIASE------------NQP------------------------------VRWTT 602
AKVIA QP V WTT
Sbjct: 1202 SFSAKVIAKSIPAQRVEEATRPYQPSESSLKRADVHGFARDPAKADRIVKEQMTSVIWTT 1261
Query: 603 PLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMMM 660
LGLPVVQPYRK + + T++Q + + +V +Q +AFPPNF+HSLD +HM++
Sbjct: 1262 ALGLPVVQPYRKSKKKQVSTAMQTVFIHDPLSNSEVSPAKQASAFPPNFIHSLDATHMIL 1321
Query: 661 TAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
TA+ C AGL FA VHDSYWTHA D+D M+ ++R FV L+ IL L E F
Sbjct: 1322 TALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILHRLREEF 1374
>L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizoctonia solani AG-1 IA
GN=AG1IA_03910 PE=3 SV=1
Length = 1371
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 288/656 (43%), Positives = 413/656 (62%), Gaps = 53/656 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKF 148
W V+R +VGS LV+ +M +AYI+ +++ + + +PAF+HS+ V G+K
Sbjct: 567 WTQVVRVRVGSFLVDSVMNSAYIKRNGTNESGENLCEEQPAFMHSYEYVR------GKKL 620
Query: 149 GIIECDPLILKGLDRSA-KNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQ 206
G+I+ +P++ + + R + + P ++PMLV P W YDKGG+L LP+ VMR +Q
Sbjct: 621 GVIKLNPVVGEKMARDPIRETLHPRHLPMLVKPQPWEDYDKGGYLKLPT-VMRIKDSPEQ 679
Query: 207 REAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD-RDDVPL 264
+K A ++ V+E LD LG T WR+N K+L+VV ++W G +A + + D+
Sbjct: 680 LSYLKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEGKGMAGIPPIQLDIEE 739
Query: 265 PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDF 324
P +P+ DD + R + +RC++ KL VAR + DE FY PHN+DF
Sbjct: 740 PPKPEEDDPRARATYLLKLKSILTDKRNNHGERCNVNYKLEVARFVNDE--FYMPHNLDF 797
Query: 325 RGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRV 384
RGRAYP+ PHLNH+G D+CRG+L FA+ RPLG+ G +WLKIHLAN++ G DK S + RV
Sbjct: 798 RGRAYPIPPHLNHIGDDLCRGLLLFAERRPLGERGLRWLKIHLANVF--GYDKASFDERV 855
Query: 385 SFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQ 444
F E H+++I DSA+ PL G++WWL A+DP+QCL+ C+ LTEAL+ PE + S++PVHQ
Sbjct: 856 LFVEKHLEEIRDSAENPLNGKQWWLKADDPWQCLSTCMELTEALKGPVPELYRSNLPVHQ 915
Query: 445 DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAI-FPD 503
DG+CNGLQHYAALG D GA VNL G++PADVYS + AR++D++ +D A+ P+
Sbjct: 916 DGTCNGLQHYAALGGDAAGAQHVNLEQGDRPADVYSHV-ARMVDVV---VDEDAALGIPE 971
Query: 504 ALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAA 563
A+ + ++ RK+VKQTVMT+VYGVT+IGAR+QI+++L++ S + A+ A
Sbjct: 972 ---AKVVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRDIVGLSREESWPVAAYLAK 1028
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIA----SENQP-----------------VRWTT 602
L A+ ++F GA I NWL A++IA S+ P V WTT
Sbjct: 1029 TQVLGAIGDLFSGASQIQNWLSISARLIAKSIPSDRMPTVLSATPREAARERMTSVIWTT 1088
Query: 603 PLGLPVVQPYRKLGRHIIKTSLQML-----TLQRETDKVMVKRQRTAFPPNFVHSLDGSH 657
LGLP+VQPYRK + I T+LQ + L + D V +Q AFPPNFVHSLD +H
Sbjct: 1089 ALGLPIVQPYRKAKKKQILTALQSVFISDPNLPTQVDPV---KQSAAFPPNFVHSLDATH 1145
Query: 658 MMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
MM+TA+ C+ + + FA VHDSYWTHA VDDM+ I+R F+ L+ + IL+ L E F
Sbjct: 1146 MMLTALECRASSITFASVHDSYWTHASTVDDMSAIIRDTFIALHSSNILQKLREEF 1201
>M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2299 PE=4 SV=1
Length = 1312
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/693 (41%), Positives = 411/693 (59%), Gaps = 58/693 (8%)
Query: 62 RKKVIDLMKKQKIAAVRGIMKDQN---DTKPWGPVMRTKVGSRLVELLMQTAYIQPPS-D 117
++ +++L ++ I A + KD+N + W ++R +VGS LV L+ A ++ + D
Sbjct: 544 QRNLVNLAMRRDIKAWQERCKDENIASNIPKWTQIIRARVGSYLVHQLLSVATVKRQAYD 603
Query: 118 QIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP-YMPM 175
+ + + +PAF ++ + G+K G+I + ++ + LD+ S + + P ++PM
Sbjct: 604 REGELWEEEQPAFYSAYEYIQ------GKKLGVIRLNEVVSQRLDKESVRETLHPRHLPM 657
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWR 234
LVPP W +D GG+ + + MR +Q ++ A LE V LD LG+T W
Sbjct: 658 LVPPRPWLTHDSGGYFSVKTSAMRYKDSVEQSSYLRAASANNGLEVVLAGLDVLGNTAWN 717
Query: 235 VNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENR-ER 293
VN++V VV ++W SG LADL + E D+ + R
Sbjct: 718 VNREVFDVVLQVWNSGEALADLPPAEMTDPEPERPPPDDIKAKGIYLQRLRQWNSIRASN 777
Query: 294 YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGR 353
+SQRCDI KL +AR E+ FY+PHN+DFRGRAYP+ PHLNH+G+D+CRG+L+FA+ +
Sbjct: 778 HSQRCDINYKLEIARSFLGEK-FYFPHNMDFRGRAYPIPPHLNHIGNDLCRGLLKFAEAK 836
Query: 354 PLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAED 413
PLG++G +WL IHLAN++ G DK S R FT+ H D + DSA +PLEG RWWL A+D
Sbjct: 837 PLGEAGLRWLHIHLANVW--GYDKASFAEREEFTKRHADLVKDSATRPLEGERWWLQADD 894
Query: 414 PFQCLAVCITLTEALR-SSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 472
P+QCLA CI L +A + PE F S +PVHQDG+CNGLQHYAALG D GA VNL G
Sbjct: 895 PWQCLATCIELNKAWNYADGPEAFPSQLPVHQDGTCNGLQHYAALGGDLQGAKQVNLRGG 954
Query: 473 EKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTY 532
++PADVY+G+A V++ + A+ A+ L +V RK+VKQTVMT+VYGVT+
Sbjct: 955 DRPADVYTGVAELVIEQLSKRAEAGDET------AQLLCGKVTRKVVKQTVMTTVYGVTF 1008
Query: 533 IGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
IGA+ Q+ R+L +R DV +++ L+ A+ Y AKV + + +F GA I +WL A++I
Sbjct: 1009 IGAKNQVMRQLADRGDVPAEE--LWSAASYLAKVIMDCIGNLFSGANLIQDWLTVSARLI 1066
Query: 592 ASENQPVR-----------------------------WTTPLGLPVVQPYRKLGRHIIKT 622
A P R WT+ LGLPVVQPYRK+ +H I T
Sbjct: 1067 AKSIPPERIAQAQLRTDKAGKRSSSTREGREQMTSVIWTSALGLPVVQPYRKIKKHQITT 1126
Query: 623 SLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYW 680
++Q + ++ + +V +Q +AFPPNF+HSLD +HM +TA+ C AGL FA VHDSYW
Sbjct: 1127 AVQSVYIRDPNQNYEVNPSKQASAFPPNFIHSLDATHMFLTALECHSAGLVFASVHDSYW 1186
Query: 681 THACDVDDMNRILRGKFVELYETPILENLLEGF 713
THACD+D M+ I+R FV L+ IL L + F
Sbjct: 1187 THACDIDTMSDIIRDTFVRLHSQDILVRLRDEF 1219
>A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_08623 PE=3 SV=1
Length = 1392
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/673 (41%), Positives = 394/673 (58%), Gaps = 69/673 (10%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFVHSFRTVTKEA 141
++ W +R KVGS L+E L++ A + P +++ V ++PAF H +
Sbjct: 548 SREWSIGIRAKVGSFLLESLLKVAKVPVTLKHPETNETVT---QMQPAFSHG------QQ 598
Query: 142 KKTGRKFGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT 200
+ G+K G+I + +I++ L R +++ ++PMLV P WTG+ GG L P VMR
Sbjct: 599 YRLGKKLGVINANKVIVELLKREPVHSLLAKHLPMLVKPEPWTGFSSGGFLRHPGKVMRV 658
Query: 201 -HGVKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV- 257
+G + QR A + L VF L+ LG W++N+ V V+ W SG +A+L
Sbjct: 659 KNGDQDQRNYADAAIDQGNLTTVFRGLNILGEQSWKINQPVFDVMLDAWNSGDAIANLAP 718
Query: 258 DRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER--YSQRCDIELKLAVARKMKDEEA 315
D+ + P EP+T + + EN + +SQRC +L +AR ++D+
Sbjct: 719 DKPRLEYPPEPETSSDP-LERRRWVTAVKKVENAKAGFHSQRCFQNFQLEIARALRDK-T 776
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY+PHNVDFRGRAYP+ P+LNH+G+D CRG++ F G+ LG SG +WLK+HLAN+Y G
Sbjct: 777 FYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMIFGVGKKLGTSGLKWLKVHLANVY--GF 834
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK SL R F H+D+I+DSA PL G RWWL AEDP+QCLA C+ L AL S P +
Sbjct: 835 DKASLSEREEFASKHIDEIYDSATNPLGGDRWWLQAEDPWQCLAACMELKNALESGDPAS 894
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
F+S++PVHQDG+CNGLQHYAALG D GA VNL G++PADVY+ +A D+++ +
Sbjct: 895 FVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAVA----DLVKESIK 950
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL--KERDVFSDDT 553
KD + A+ L ++ RK+VKQTVMT+VYGVT+IGA+ Q++++L RD+ D
Sbjct: 951 KD--LLEGHSKAKILDGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQLVAAHRDLPDDTE 1008
Query: 554 KLFGA-SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP--------------- 597
G + Y TAL MF+GA I WLG+CA ++S P
Sbjct: 1009 DNPGTLASYVVTKIFTALSTMFRGAHDIQYWLGDCASRVSSSLTPEQVNRIVEHASKQSA 1068
Query: 598 -------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKV 636
V WTTPL LPVVQPYR +++TSLQ+L+L +D V
Sbjct: 1069 RPSKGDASKLEEMSQFKSSVIWTTPLNLPVVQPYRTNKSRLVRTSLQLLSLAEPHRSDPV 1128
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
++Q FPPNF+HSLD +HM+++AV +A L+FA VHDS+WTHA DVD MN ILR
Sbjct: 1129 SSRKQLQGFPPNFIHSLDATHMLLSAVKSNEAKLSFAAVHDSFWTHAADVDTMNTILRDA 1188
Query: 697 FVELYETPILENL 709
FVE++ ++ L
Sbjct: 1189 FVEIHSDDVIGRL 1201
>M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed RNA polymerase
RPO41 OS=Pseudozyma antarctica T-34 GN=PANT_12c00137 PE=4
SV=1
Length = 1509
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/709 (40%), Positives = 412/709 (58%), Gaps = 75/709 (10%)
Query: 62 RKKVIDLMKKQKIAAVRGIMKDQ---NDTKPWGPVMRTKVGSRLVELLMQTAYI-QPPSD 117
++ ++D +++I + ++Q + W + R +VGS LV+ LMQ A + + +D
Sbjct: 666 KRGLVDFAARREIKEWQKQQEEQGVISSIPKWTQITRARVGSYLVQHLMQVATVNRKATD 725
Query: 118 QIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP--YMPM 175
+ + +PAF +++ + G+K G+I+ + ++ K LD+ + + + ++PM
Sbjct: 726 RDGILWEEDQPAFYSTYQYLG------GKKLGVIKLNEVVAKRLDKDSISETLHPRHLPM 779
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWR 234
LVPP WT +D GG+ + MR +Q ++ A L+ V ALD LG+T W+
Sbjct: 780 LVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQGSYLRAASDNGDLDTVLAALDVLGNTSWK 839
Query: 235 VNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER 293
+NK + V+ +W SG +AD+ + + P P +PD D I N++R
Sbjct: 840 INKPIFDVMLEVWNSGKDIADMPPMEMETPEPVKPDNYDH-DIKARSVYLQRLKQWNQQR 898
Query: 294 ---YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFA 350
+SQRCD+ KL +AR E FY+PHN+DFRGRAYPM PHLNH+G+D+CRG+L FA
Sbjct: 899 SSNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLLMFA 957
Query: 351 DGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLN 410
D +PLGK+G +WL+IH++N++ G DK S R F H DI DS ++PL+G RWWL
Sbjct: 958 DSKPLGKAGLRWLRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERPLDGNRWWLK 1015
Query: 411 AEDPFQCLAVCITLTEAL-RSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
A+DP+QCLA C+ L AL PE + S +PVHQDG+CNGLQHYAALG D GA VNL
Sbjct: 1016 ADDPWQCLAACMELRAALDHPEGPEAYESCLPVHQDGTCNGLQHYAALGGDLAGAKQVNL 1075
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
G++PADVYSG+A V+ ++ +A K A+ L +V RK+VKQTVMT+VYG
Sbjct: 1076 SGGDRPADVYSGVADLVIKVLDEEAAKGDRT------AKILQGKVTRKVVKQTVMTTVYG 1129
Query: 530 VTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECA 588
VT+IGA+ Q+ R+L +R DV ++D LF A+ + AKV ++ + +F GA+ I +WL A
Sbjct: 1130 VTFIGAKNQVMRQLADRGDVPAED--LFNAASFLAKVIMSCIGNLFSGAQKIQDWLSFSA 1187
Query: 589 KVIA------------------------------------------SENQPVRWTTPLGL 606
KVIA + V WTT LGL
Sbjct: 1188 KVIAKSIPGQRVEEATRPYLPNEANLRRADVRGFSRDPAKADRIAKEQMTSVIWTTALGL 1247
Query: 607 PVVQPYRKLGRHIIKTSLQMLTLQRE--TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 664
PVVQPYRK + + TS+Q + + +V +Q +AFPPNF+HSLD +HM++TA+
Sbjct: 1248 PVVQPYRKAKKRQVSTSMQTVFINDPLLNAEVSPAKQASAFPPNFIHSLDATHMILTALE 1307
Query: 665 CKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
C AGL FA VHDSYWTHA D+D M+ ++R FV L+ IL L E F
Sbjct: 1308 CHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILYRLREEF 1356
>I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia sebi (strain ATCC
MYA-4683 / CBS 633.66) GN=WALSEDRAFT_49331 PE=3 SV=1
Length = 1136
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/668 (41%), Positives = 385/668 (57%), Gaps = 60/668 (8%)
Query: 87 TKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKT 144
T W ++R KVGS LV+ LM+ A I + G + +PAF S++ V
Sbjct: 358 TPNWSQIIRIKVGSFLVDSLMECATITRTAKHPESGEEMTEAQPAFSQSYQYVR------ 411
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIP--YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G+K G+I+ + + LD+ I ++PMLV P W YD GG+LF + MR
Sbjct: 412 GKKLGVIKVNTAVADRLDKDPLGSTIHPRHLPMLVKPKPWLRYDSGGYLFHKNSAMRFKD 471
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD-RD 260
+Q+ + +A + +EPV LD LG T W +N+KV +VV W +G LA +
Sbjct: 472 SNEQQSYILKASSEGTMEPVLAGLDVLGATPWNINRKVFNVVKEAWNTGEGLAKIPPATT 531
Query: 261 DVPLPEEPDTD--DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYY 318
P P +P D + E R +S RCD KL +AR +E FY+
Sbjct: 532 KTPDPVKPANYAIDPKERSNYLQSMKAVVNERRNNHSIRCDTNYKLEIARAFLNE-TFYF 590
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PH +DFRGRAYP+ PHLNH+G D+ RG+L FA+ RPLG+ G +WLKIHLAN+Y G DK
Sbjct: 591 PHTLDFRGRAYPIPPHLNHIGDDLSRGLLIFAEKRPLGEKGMRWLKIHLANVY--GYDKA 648
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
S R F + H+++I+DSAD PL GR+WWL A+DP+QCLA C + A+ S +P + S
Sbjct: 649 SFNEREQFADEHMEEIYDSADNPLNGRKWWLKADDPWQCLAACYEIQAAMLSPNPLAYES 708
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
+PVHQDG+CNGLQHYAALG D +GA VNL G++P+DVY+ +A D++ D +KD
Sbjct: 709 ALPVHQDGTCNGLQHYAALGGDPMGAKQVNLEQGDRPSDVYTAVA----DLVIEDIKKD- 763
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA 558
A+ D A+ L ++ RK+VKQTVMT+VYGVT+IGAR+QI ++L++R D K++
Sbjct: 764 ALESDNEFAKILEGKITRKVVKQTVMTTVYGVTFIGARDQIDKQLQDRGDIPQD-KVYTT 822
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR------------------- 599
+ Y AK L ++ ++F GA +I WL A+ IA P R
Sbjct: 823 ASYLAKKVLRSIGDLFAGANAIQKWLSMSARYIAKSIPPERLIRALEPLEAKRKNSPANK 882
Query: 600 ----------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVK--RQ 641
WTTPLGLP+VQPYRK + + T LQ + L V +Q
Sbjct: 883 GNVSTRTAKEQMTSVIWTTPLGLPIVQPYRKAKKKQVATLLQSVYLADPNIPTEVNPIKQ 942
Query: 642 RTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELY 701
+AFPPNF+HSLD +HM++TA+ C Q G+ +A VHDSYWTHA VD M+ I+R FV+L+
Sbjct: 943 ASAFPPNFIHSLDATHMVLTALQCSQIGITYASVHDSYWTHASTVDHMSEIIRDTFVKLH 1002
Query: 702 ETPILENL 709
IL+ L
Sbjct: 1003 CEEILKRL 1010
>G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida tenuis (strain
ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315
/ NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_97960 PE=3 SV=1
Length = 1279
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/669 (40%), Positives = 395/669 (59%), Gaps = 63/669 (9%)
Query: 83 DQNDTKPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFVHSFRTV 137
D W + K+GS L LL+ A + P + + V GS +PAF H+++ +
Sbjct: 518 DNQAHNEWDNTLHAKIGSILTSLLIHVAKVPVKGTDPATGKTVTGS---QPAFFHTYQYL 574
Query: 138 TKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP--YMPMLVPPVNWTGYDKGGHLFLPS 195
G+K G+++ I+K L ++ ++PML PP W+ Y++GG+LF +
Sbjct: 575 Q------GQKLGVLKLHKNIIKQLSVDVDGSLLQPHFLPMLTPPRKWSSYNEGGYLFSQN 628
Query: 196 YVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLA 254
++RT + +K A ++ L+ V++ L+ LG+T W VN+KVL V+ + W +G
Sbjct: 629 TLVRTRDSPETLAYLKAASQRGDLDKVYDGLNVLGNTPWTVNRKVLEVMTKFWNTGDEFL 688
Query: 255 DL---VDRDDVPLP----EEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVA 307
D+ VD ++P P EP+ E Q + SQRCD KL +A
Sbjct: 689 DIPPVVDEPELPEPVPSNAEPNVLREYQRKVRLAINISASAK-----SQRCDTNYKLEIA 743
Query: 308 RKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHL 367
R E+ F+ PHN+DFRGRAYPM PH NHLG+D+ R + F DG+ LG+ G WLK+HL
Sbjct: 744 RAFLGEKMFF-PHNIDFRGRAYPMSPHFNHLGNDLTRSLFLFWDGKQLGERGLWWLKVHL 802
Query: 368 ANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEA 427
ANLY GVDK+ LE R FTE+H+D I +SA+ P + WW E P+Q LA C L EA
Sbjct: 803 ANLY--GVDKIPLEERAQFTETHLDKIRESAETPFDKDAWWTKGEKPWQVLACCFELNEA 860
Query: 428 LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 487
+ P ++SH+PVHQDGSCNGLQHYAALG D GA VNL ++P DVYS +A+ V
Sbjct: 861 YKLEDPTQYVSHVPVHQDGSCNGLQHYAALGGDIEGARQVNLYPADRPQDVYSSVASIVQ 920
Query: 488 DIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERD 547
+ +DA+ HA L ++++R++VKQTVMT+VYGVT++GAREQIK++LK
Sbjct: 921 QRVDADAEAGEK------HAVFLKDKINRRVVKQTVMTNVYGVTFVGAREQIKKQLK--- 971
Query: 548 VFSDDTKLFGASCYAAKVT---LTALEEMFQGARSIMNWLGECAKVIA------------ 592
V D + YA +T A+ E+F GA I +WLGE A++I+
Sbjct: 972 VHFDSDSEENSGEYAQYLTQHVFAAVRELFSGAHLIQDWLGEAARIISKSVRVDYEDSTT 1031
Query: 593 SENQP-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMV--KRQRTAF 645
S ++P V WTTPLGLP VQPYR + + IIKT+LQ + + +V ++Q+TA
Sbjct: 1032 SNDKPNHVSSVIWTTPLGLPCVQPYRTIKKQIIKTNLQDVAITDPFGASLVDARKQKTAL 1091
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPNFVHSLD +HM+MTA CK ++FA VHDSYWTHA D+D +++ILR +F++L+ +
Sbjct: 1092 PPNFVHSLDATHMLMTASTCKYENISFASVHDSYWTHASDIDVLSKILREQFIKLHSENL 1151
Query: 706 LENLLEGFQ 714
++ + + F+
Sbjct: 1152 IQKVKDEFE 1160
>G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomium thermophilum
(strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0035550 PE=3 SV=1
Length = 1394
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/664 (41%), Positives = 386/664 (58%), Gaps = 61/664 (9%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSP--DIRPAFVHSFRTVTKEAKKTGRK 147
W +R KVG+ L+ +M+TA I D V ++PAF H+ + + G+K
Sbjct: 548 WPTAIRAKVGALLLTAMMETAKIMVVRDHPVTKEKVHQLQPAFSHAMQL------RKGKK 601
Query: 148 FGIIECDPLILKGLDRSAK-NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR--THGVK 204
GII+ +P +++ L R + ++ ++PMLV P WT +DKGG L S ++R H ++
Sbjct: 602 VGIIQANPELVEILKREPRAELLARHLPMLVEPEPWTKFDKGGFLECQSPLIRLKNHEIE 661
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL-VDRDDVP 263
Q+ A + +E + LD LG T WR+N+KV V+ +W G A++ ++P
Sbjct: 662 QKIYAEAAIERGDMEQMMRGLDVLGKTAWRINRKVFDVMLTVWNEGIAFANIPALHPNIP 721
Query: 264 LPEEPDT-DDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
+P EPD+ DD + E +S RC + +L +AR D+ FY+PHN+
Sbjct: 722 IPPEPDSSDDPMKKRIWMRQVKAIQNEKSGMHSVRCFMNFQLEIARAFIDQ-TFYFPHNL 780
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYP+ P+LNH+G+D RG+L FA G+PLG++G +WLKIHLAN+Y G DK SL+
Sbjct: 781 DFRGRAYPLPPYLNHMGADHMRGMLLFAKGKPLGENGLRWLKIHLANVY--GYDKASLDD 838
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
R F + ++ +I DSA PL G+RWWL EDP+QCLA C L AL+S P F+SH+PV
Sbjct: 839 REKFADDNLANIMDSASNPLGGKRWWLQGEDPWQCLATCFELAAALQSPDPTQFVSHLPV 898
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDG+CNGLQHYAALG D GA VNL+ GEKPADVYS +A V +++ DA
Sbjct: 899 HQDGTCNGLQHYAALGGDTWGAQQVNLIPGEKPADVYSAVAQLVQEMVTKDAAAGNEF-- 956
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGA---- 558
A+ L ++ RK+VKQTVMT+VYGVT++GA+ Q++++L ++ + G
Sbjct: 957 ----AKALDGKITRKVVKQTVMTNVYGVTFVGAKRQVQKQLDA--LYPNLESQTGCSTSI 1010
Query: 559 -SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP-------------------- 597
S Y A AL MF GA +I +WLGE + P
Sbjct: 1011 LSSYMATKIFAALGTMFSGAYAIQSWLGEIGDRVCRAITPEQLNRIEAEATGESKKKFTD 1070
Query: 598 ----------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAF 645
+ WTTPL +PVVQPYRK G ++ T LQ L LQ D V ++Q AF
Sbjct: 1071 AELNNTFRNTIVWTTPLRMPVVQPYRKSGTRVVPTCLQDLALQVSDRDDPVNRRKQLQAF 1130
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPNF+HSLD SHMM++A+ C + GL FA VHDS+WTHA DVD M++++R F+ ++ +
Sbjct: 1131 PPNFIHSLDASHMMLSALECHELGLTFAAVHDSFWTHAADVDKMSKVIRESFIRIHSEDV 1190
Query: 706 LENL 709
+ L
Sbjct: 1191 IGRL 1194
>I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0G03490 PE=3 SV=1
Length = 1352
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/678 (40%), Positives = 396/678 (58%), Gaps = 53/678 (7%)
Query: 71 KQKIAAVRGIMKDQNDTKP---WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDG 122
K+ + + + ++D N K W R ++GS ++ L+ A + P +++ V G
Sbjct: 575 KKYVWSAKKRLRDHNIEKSKIEWPQAARAQIGSIMISTLLHVAKVNVRGHDPKTNKYVYG 634
Query: 123 SPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPV 180
PAF HS++ G K G+++ ++K L+ R A ++ MPM+V P
Sbjct: 635 E---LPAFSHSYQY------HNGAKIGVLKIHKSLIKQLNGERLATSVQPQQMPMIVKPR 685
Query: 181 NWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEP-VFEALDTLGHTKWRVNKKV 239
W ++ GG+ + S ++RT +Q +K ++ L P ++ L+ +G T W VN+KV
Sbjct: 686 KWVSWNSGGYHYSQSILIRTRDSPEQVAYLKAVSEENLIPTIYSGLNVIGLTGWTVNRKV 745
Query: 240 LSVVDRIWASGGRLADL--VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQR 297
+V+ +W +G + D+ + D V LP P + ++ + S R
Sbjct: 746 FNVLSEVWNTGKQFLDIPGIQDDMVVLPPLPSNAEPEEVREWKLKNKEIANKISSDRSVR 805
Query: 298 CDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGK 357
CD KL +AR E+ Y+PHN+DFRGRAYP+ PH NHLG+D+ RG+L F GR LG
Sbjct: 806 CDSNYKLEIARAFLGEK-IYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGRRLGP 864
Query: 358 SGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQC 417
G +WLK+HLANL+ G DK SL+ R++F H++D+ DSA+ PL+G+ WW +A+ P+Q
Sbjct: 865 QGLKWLKVHLANLF--GYDKASLDDRIAFANQHIEDLKDSAEHPLDGKGWWQSADKPWQA 922
Query: 418 LAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 477
LA C+ L EA + +PE FISH PVHQDG+CNGLQHYAALG D GA VNLV KP D
Sbjct: 923 LATCMELNEAFKLENPEDFISHQPVHQDGTCNGLQHYAALGGDVEGAIQVNLVPSPKPQD 982
Query: 478 VYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGARE 537
VY+ +A V +A+ D A A+ L ++ RK+VKQTVMT+VYGVT+IGA
Sbjct: 983 VYNHVAKLV------EARLDVAAKEGDETAKILQGKITRKVVKQTVMTNVYGVTFIGATR 1036
Query: 538 QIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA----- 592
QI ++L E+ F D F Y AK A+ E F+GA I +WLGEC+K I+
Sbjct: 1037 QIAKQLTEK--FDDKQLAFEYGGYLAKHVFAAIRESFKGAHEIQDWLGECSKRISRAIRL 1094
Query: 593 --------SENQP-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVM 637
+ N+P V WTTPLGLP+VQPYR + IKT+LQ + + + V
Sbjct: 1095 DVDSKSFRNGNKPDFMSSVIWTTPLGLPIVQPYRDESKKQIKTNLQTIFIADPLAVNPVN 1154
Query: 638 VKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKF 697
+RQ++ FPPNF+HSLD SHM+++A C + GL FA VHDSYWTHACDVD MN +LR +F
Sbjct: 1155 ARRQKSGFPPNFIHSLDASHMLLSATKCGEHGLDFASVHDSYWTHACDVDKMNYLLREEF 1214
Query: 698 VELYETPILENLLEGFQK 715
++L+E ++E L F +
Sbjct: 1215 IKLHEVDLIERLKTEFNQ 1232
>J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969
/ KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0E03120
PE=3 SV=1
Length = 1276
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/663 (41%), Positives = 388/663 (58%), Gaps = 67/663 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--------PAFVHSFRTVTKEA 141
W +R KVGS LV +L++ A D V+G+ I PAF HS++
Sbjct: 517 WPQAIRAKVGSILVSMLIRIA------DVTVEGTDPITKEKVYGKTPAFSHSYQY----- 565
Query: 142 KKTGRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
G K GI++ ++ L+ R ++ +PMLV P W + GG+ + S ++R
Sbjct: 566 -HNGVKLGIVKIHKSLINQLNGERLVASVQPQLLPMLVKPREWKNWKSGGYFYSQSTLVR 624
Query: 200 THGVKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD 258
+ +Q ++ A ++ V++ L+ LG+T W VN+ + +VV ++W G ++
Sbjct: 625 SRDCPEQLAYLEAASNSNAIDKVYDGLNVLGNTAWTVNRNIFNVVSKVWNEGKPFLEIPG 684
Query: 259 RDDVP--LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
++ LP P D A I E S RCD+ KL +AR E+ F
Sbjct: 685 TQEILELLPPPPKGSDPAVINEWRTKNRYLSNEYSANRSMRCDLNYKLEIARAFLGEK-F 743
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
Y+PHNVDFRGRAYP+ PH NHLG+D+ RG+L F G+ LG G +WLK+HL+NLY GVD
Sbjct: 744 YFPHNVDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKKLGSLGLKWLKVHLSNLY--GVD 801
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
K+SL+ RV+F ES +D++ DSA+ PL GR WW A+ P+Q LA C+ L EAL+ +PE F
Sbjct: 802 KVSLDDRVAFIESQLDEVKDSAEDPLNGRGWWKKADKPWQALATCMELNEALKLDNPEDF 861
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS---- 492
+SH PVHQDG+CNGLQHYAALG D GA VNL+ G P DVYS +A +I+RS
Sbjct: 862 VSHQPVHQDGTCNGLQHYAALGGDMEGAEQVNLIPGAMPKDVYSHVA----NIVRSRLQV 917
Query: 493 --DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFS 550
+ + DP A+ LV++++RK+VKQTVMT VYGVT +GA QI +++ D FS
Sbjct: 918 LVEQENDPM-------AKFLVDKLNRKVVKQTVMTHVYGVTLVGATLQIDKQIG--DYFS 968
Query: 551 DDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ-------------- 596
D + S Y AK A+ E F+GA I +WLGEC K I+ +
Sbjct: 969 DHRESLKYSKYLAKHVFAAIRESFKGAHLIQDWLGECCKRISKSVRLDVDEKSFKNGDKL 1028
Query: 597 ----PVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFV 650
+ WTTPLGLP+VQPYR++ + + T+LQ + + +++ +RQ+ FPPNF+
Sbjct: 1029 DFMTSIIWTTPLGLPIVQPYREVSKKQVDTNLQTVFISDPFAVNQINARRQKAGFPPNFI 1088
Query: 651 HSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLL 710
HSLD SHM+++A C + GL FA VHDSYWTHACDV+ MN+ +R +FV L+E ++E L
Sbjct: 1089 HSLDASHMLLSASKCAEEGLDFASVHDSYWTHACDVEKMNKHIRNEFVTLHEVDLIERLK 1148
Query: 711 EGF 713
E F
Sbjct: 1149 EEF 1151
>M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_57977 PE=3 SV=1
Length = 966
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/690 (40%), Positives = 397/690 (57%), Gaps = 73/690 (10%)
Query: 76 AVRGIMKDQND-TKPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPA 129
A R M+D D T W ++R KVG LV+ LM A I P ++I + +PA
Sbjct: 175 AARKYMEDAEDWTSDWSQLVRVKVGGFLVDCLMDVATITRSMTDPNGEEIYS---EEQPA 231
Query: 130 FVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS-AKNMVIP-YMPMLVPPVNWTGYDK 187
F HS+ V G K G+I+ +P++ + + + KN + P ++PMLV P W G D+
Sbjct: 232 FFHSYEYVR------GHKLGVIKLNPVVAERMAKDRIKNTLHPRHLPMLVKPKPWLGPDQ 285
Query: 188 GGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRI 246
GG+++ + MR +Q ++ A LE V+ ALD LG T W +N+++ +V +
Sbjct: 286 GGYMYNRTTAMRYKDSVEQANYLRHASAAGNLELVYAALDVLGSTPWNINRRIFDIVLTV 345
Query: 247 WASGGRLADLVDR-DDVPLPEEPD---TDDEAQIXXXXXXXXXXXXENRERYSQRCDIEL 302
W SG R+ + D+P PE P+ TD +A+ + +S RC +
Sbjct: 346 WNSGKRMCKMPPVVSDIPEPERPENYETDQQAR-AIYLQRHKLYAQQKANNHSDRCSVNY 404
Query: 303 KLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQW 362
K+ +AR + F PHNVDFRGRAYP+ PHL+H+G D+ RG+L F + +PLG+ G W
Sbjct: 405 KIEIARAFLGDTIFM-PHNVDFRGRAYPVPPHLSHIGDDLSRGLLLFGEAKPLGERGFWW 463
Query: 363 LKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCI 422
LK+HLANLY G DK S R++F E+H+DDIFDS D PL+GR WW A+DP+QCLA C+
Sbjct: 464 LKVHLANLY--GYDKGSFPERIAFVEAHLDDIFDSVDHPLDGRMWWTKADDPWQCLATCM 521
Query: 423 TLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 482
L A+ S P + +P+HQDG+CNGLQHYAALG D GAA VNL ++P+DVY+ +
Sbjct: 522 ELKAAIESGDPHKYECALPIHQDGTCNGLQHYAALGGDTQGAAQVNLAVTDRPSDVYTYV 581
Query: 483 AARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 542
A V +R D K + A L +V RK+VKQTVMT+VYGVTYIGAR QI+++
Sbjct: 582 ADMVEGRIREDVAKGDKV------AMLLQGKVARKVVKQTVMTTVYGVTYIGARAQIEKQ 635
Query: 543 LKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR-- 599
L R D+ +++ + AS Y AK L ++ ++F+GA+ I W CA++IA P R
Sbjct: 636 LASRGDIPAEEC--WAASSYLAKHVLGSIGDLFRGAKDIQLWFTSCARLIAKSIPPERIP 693
Query: 600 ----------------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQ 625
WTTPLGLP+VQPYR + R I T LQ
Sbjct: 694 HACGLVEEEKKKGRPTAKKHPVVRMKAEQMTSVVWTTPLGLPIVQPYRTVKRKQIMTGLQ 753
Query: 626 MLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHA 683
+ + + V ++Q +AFPPNF+HSLD +HMM+TA+ C+ GL FA VHDSYWTHA
Sbjct: 754 TVFISDPNQPAAVNSQKQASAFPPNFIHSLDATHMMLTALECRAQGLTFASVHDSYWTHA 813
Query: 684 CDVDDMNRILRGKFVELYETPILENLLEGF 713
D+D+M+ I+R F+ L+ + +L L F
Sbjct: 814 GDIDNMSAIIRDTFIALHSSDVLLQLHNEF 843
>G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavia terrestris
(strain ATCC 38088 / NRRL 8126) GN=THITE_2114671 PE=3
SV=1
Length = 1408
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/699 (40%), Positives = 402/699 (57%), Gaps = 80/699 (11%)
Query: 76 AVRGIMKDQNDTKP------WGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSP 124
+V + K+ ++ P W V+R K G+ L+ L+ +A I P + Q+V S
Sbjct: 541 SVNAVSKEIGESPPDRLEARWPTVIRAKFGAVLLGALIDSAKIVVNREHPDTKQMVTQS- 599
Query: 125 DIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP-YMPMLVPPVNWT 183
PAF+H+ + K GRK G+I+ + ++ + R + + ++PM+V PV W+
Sbjct: 600 --MPAFIHTVQL------KKGRKVGVIQPNRALVDLMKREPRGEALARHLPMVVEPVPWS 651
Query: 184 GYDKGGHLFLPSYVMR--THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLS 241
+DKGG + PS ++R H +Q+ A + +E + LD LG T WR+N+ V
Sbjct: 652 RFDKGGFIGSPSPLIRLKNHEKEQRFYAEAAIERGDMEQMMRGLDVLGKTAWRINRPVFD 711
Query: 242 VVDRIWASGGRLADLVDRD-DVPLPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCD 299
V+ W SG A+ D +P+P EPD TDD + E +S RC
Sbjct: 712 VMLEAWNSGEEFANFPALDPKIPIPPEPDSTDDPMKRRLWVRAVKAAENEKSGLHSVRCF 771
Query: 300 IELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSG 359
I +L +AR +D+ FY+PHN+DFRGRAYP+ +LNH+G+D RG+L FA G+PLGK+G
Sbjct: 772 INFQLEIARAFRDQ-TFYFPHNLDFRGRAYPLPTYLNHMGADHMRGLLIFAKGKPLGKNG 830
Query: 360 RQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLA 419
+WLK+HL+N+Y G DK SL+ R F ++++IFDSAD PL G+RWWL AEDP+QCLA
Sbjct: 831 LRWLKVHLSNVY--GFDKASLQEREDFANQNLENIFDSADNPLTGKRWWLGAEDPWQCLA 888
Query: 420 VCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 479
C L AL S P F+SH PVHQDG+CNGLQHYAALG D GA VNL+ G++PADVY
Sbjct: 889 ACFELKAALSSPDPAAFVSHFPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVY 948
Query: 480 SGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQI 539
+ +A ++++ KD A + A+ + +++RK+VKQTVMT+VYGVT++GA++Q+
Sbjct: 949 AAVA----ELVQEQVAKDVAAGNN--FAKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQV 1002
Query: 540 KRRLKERDVFSDDTKLFGAS-----CYAAKVTLTALEEMFQGARSIMNWLGE-----CAK 589
+++L ++ D K G S Y A AL MF+GA I NWLGE C
Sbjct: 1003 QKQLDA--LYPDIEKETGISSAILGSYIASKVFVALSTMFRGAHDIQNWLGEIGGRVCRA 1060
Query: 590 VI---------ASENQPVR-----------------------WTTPLGLPVVQPYRKLGR 617
V +S + VR WTTPL +PVVQPYRK G
Sbjct: 1061 VTPEQLDRLAESSGEKVVRRKTVKTERSTEDELASQFRNTLVWTTPLRMPVVQPYRKSGT 1120
Query: 618 HIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGV 675
+I T LQ +LT D V ++Q AFPPNF+HSLD SHMM++A+ C GL FA V
Sbjct: 1121 RLISTCLQDLILTSTERDDPVNRRKQLQAFPPNFIHSLDASHMMLSALECNDMGLTFAAV 1180
Query: 676 HDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
HDS+WTHA DVD MN ++R F+ ++ ++ L F+
Sbjct: 1181 HDSFWTHAADVDAMNTVIRDSFIRIHREDVIGRLKAEFE 1219
>Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0K12628g PE=3 SV=1
Length = 1326
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/654 (41%), Positives = 380/654 (58%), Gaps = 50/654 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R K+GS L+ L+ A + P + + V G PAF H++
Sbjct: 568 WPQTVRAKIGSTLISFLIHVAKVSVEGTDPVTKEKVYGDA---PAFAHTY------VYHN 618
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K GII+ ++ L+ R ++ +PMLV P W G+ GG+L+ S ++R+
Sbjct: 619 GSKLGIIKIHKALINRLNGERLLASVQPQLLPMLVKPRPWKGWKSGGYLYTQSILVRSRD 678
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD-RD 260
+Q ++ ++ +++ L+ LG T W VN+KV VV ++W G ++ +D
Sbjct: 679 SPEQLAYLQAVSDSGAIDKIYDGLNVLGETAWTVNRKVFDVVSKVWNEGTNFLEIPGIQD 738
Query: 261 DVPL-PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
++ L P P + D I + S RCD+ KL +AR E+ FY+P
Sbjct: 739 ELKLLPPPPRSSDPTVIREWKLKNKELANKYSSDKSVRCDLNYKLEIARAFLGEK-FYFP 797
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ R +L F G+ LG G WLK+HL+NL+ GVDK+
Sbjct: 798 HNLDFRGRAYPLSPHFNHLGNDLSRSLLIFWKGKRLGPDGLNWLKVHLSNLF--GVDKVP 855
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
LE RV FTE H++DI DSA+ PL G+ WW A+ P+Q LA C+ L EAL+ +PE +ISH
Sbjct: 856 LEDRVKFTECHIEDIKDSAENPLNGKGWWKTADKPWQALATCMELNEALKLDNPEDYISH 915
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHY+ALG D GA VNLV EKP DVYS +A V +A+ + A
Sbjct: 916 QPVHQDGTCNGLQHYSALGGDVEGATQVNLVPSEKPQDVYSFVAKLV------EARLEKA 969
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
A L +V RK+VKQTVMT+VYGVTY+GA QI ++L +F D S
Sbjct: 970 AAKGDEKALILKGKVSRKVVKQTVMTNVYGVTYVGATFQIAKQLTA--IFDDRAYSLELS 1027
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y AK A+ E+F+GA I +WLGECAK I+ ++P + WT
Sbjct: 1028 KYLAKHVFAAVRELFEGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGDKPDYMSSIIWT 1087
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR G+ + T+LQ + + + + +RQ+ FPPNF+HSLD SHM+
Sbjct: 1088 TPLGLPIVQPYRDAGKKQVITNLQSVFISDPFAINPINSRRQKAGFPPNFIHSLDASHML 1147
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
++A C+ GL FA VHDSYWTHA DVD MN ++R KF+EL+E +++ L E F
Sbjct: 1148 LSAAGCRDNGLDFASVHDSYWTHASDVDKMNVVIRDKFIELHEVDLIQRLKEEF 1201
>N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeria graminis f. sp.
hordei DH14 GN=BGHDH14_bgh06417 PE=4 SV=1
Length = 1434
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/692 (39%), Positives = 398/692 (57%), Gaps = 84/692 (12%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
KPW ++ KVG+ L+ LM+ A + P +++ + ++ AF H+ +
Sbjct: 534 KPWPLPLKAKVGAVLMSHLMEVAKVSARVKHPETNEEL---VQVQSAFTHAHQY------ 584
Query: 143 KTGRKFGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT- 200
K G+K GI+ + ++++ L R +++ ++PM+V P +W G++KGG++ P+ +MR
Sbjct: 585 KKGKKTGIVIMNKVLIEQLQREPVHSLLAKHLPMVVEPDDWRGFEKGGYIVYPARIMRIK 644
Query: 201 HGVKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLAD---L 256
G ++QR + A + ++ V + L+ LG T WR+N++V ++ + W +G +A+ L
Sbjct: 645 QGDEEQRHYCEAAISQGEMSKVVQGLNVLGKTSWRINQQVFDIMLQAWNTGEAIANFPPL 704
Query: 257 VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ DVP PE T D + +SQRC +L +A+ +KD+E F
Sbjct: 705 NPKIDVP-PEPVSTTDPLERGRWIRKVKIAQNIKTGMHSQRCFQNFQLEIAQALKDKE-F 762
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
Y+PHNVDFRGRAYP+ P+LNH+G+D CRG+L F G+ LG+SG +WLKIH++N+Y G D
Sbjct: 763 YFPHNVDFRGRAYPLPPYLNHIGADHCRGLLIFGRGKQLGESGLKWLKIHISNVY--GYD 820
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
K SL+ R SFT S +++I+DSA P+ G++WWL AEDP+QCLA CI L AL S P F
Sbjct: 821 KASLQDRESFTSSKLEEIYDSALNPMNGKKWWLEAEDPWQCLAACIELKNALESPDPTKF 880
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDG+CNGLQHYAALG D GA VNL GEKPADVYS +A D++R D K
Sbjct: 881 VSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGEKPADVYSAVA----DLVRIDIAK 936
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVF------- 549
D A L ++ RK VKQTVMT+VYGVT+IGA Q++++L
Sbjct: 937 DKEAGNPL--AAALEGKITRKTVKQTVMTNVYGVTFIGASAQVRKQLAASQTTPSIDQPE 994
Query: 550 SDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE--------------- 594
S+ + Y A+ TAL MF+GA I WL ECA I +
Sbjct: 995 SESQNRHNDAAYVARKIFTALSTMFRGAHDIQYWLAECATRITTSLNAQQISRLEAEWDN 1054
Query: 595 ------------------------------NQPVRWTTPLGLPVVQPYRKLGRHIIKTSL 624
V WT+PLGLPVVQPYR L +++T++
Sbjct: 1055 LYKSHIESLESESNGKKSSRHSKIDDMLMFKSGVIWTSPLGLPVVQPYRTLKGKVVRTNM 1114
Query: 625 QMLTL--QRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTH 682
Q + L + V ++Q FPPNF+HSLD SHM+++A+ C + GL+FA VHDS+WTH
Sbjct: 1115 QNINLCEPSKNSPVSKRKQLQGFPPNFIHSLDASHMILSAIGCDKLGLSFAAVHDSFWTH 1174
Query: 683 ACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
ACD+D MN +LR F+E++ I+ L F+
Sbjct: 1175 ACDIDVMNNVLRESFIEIHSEDIIGRLSSEFK 1206
>Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoeba vermiformis
GN=mtRNAP PE=3 SV=1
Length = 992
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/663 (41%), Positives = 395/663 (59%), Gaps = 30/663 (4%)
Query: 60 KLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQI 119
K +K+V++ ++ R +K W ++ +G+RL+ LL+ A ++ +
Sbjct: 316 KKKKRVVNFTSVNRLN--RRALKVLGSEALWSRGLKEFMGARLLALLLSVAQLR--EEDP 371
Query: 120 VDGSPDIRPAFVHSFRTVTK----EAKKTGRKFGIIECDPLILKGLDRSAKNMV--IPYM 173
V G RPAF S RT + ++ + + + + + D + I
Sbjct: 372 VTGIFHARPAFEVSHRTQHRKEGMDSTHNPSRLSVSASEAVRAR-FDAMMTHFFHFIRQY 430
Query: 174 PMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKW 233
PM +PP W D+GG+L + + R ++Q + R L ++E L+ LG T W
Sbjct: 431 PMQIPPRPWDSPDRGGYLAVQVPIFRYQSYEEQFRPLFRK-SDDLAVIYEGLNALGETPW 489
Query: 234 RVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER 293
R+ ++V VV R W GG LAD+ DR D P P +++ N +
Sbjct: 490 RIYQRVYHVVKRAWEQGGDLADIPDRRDKPYPMPTALGKDSRWYRQLKKIDQL---NYDL 546
Query: 294 YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGR 353
S R D LK+ VA K D+ Y+PHN+DFRGR YP+ PHLNH+GSD+ RG+L FADG+
Sbjct: 547 VSLRADFLLKMEVAEKFMDK-TLYFPHNMDFRGRVYPVPPHLNHMGSDMSRGLLWFADGK 605
Query: 354 PLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAED 413
PLG+ G WL+I LANLY G DK+ R+ F + D I+ A +PLE R WW+ A+
Sbjct: 606 PLGERGLHWLRIQLANLY--GFDKVPFSDRLDFVSKNQDKIYSCAQRPLEDR-WWVAADS 662
Query: 414 PFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 473
P+Q LA C A+ S+ P +++SH+P+ QDG+CNGLQHYAALG D+ GA +VNL+ +
Sbjct: 663 PWQFLAACFEYYNAMHSADPHSYVSHLPIQQDGTCNGLQHYAALGGDEQGAKSVNLLPSD 722
Query: 474 KPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYI 533
+P DVYS +A V + DA+ A+ A+ +VDRK+VKQTVMTSVYGVT+I
Sbjct: 723 RPQDVYSDVAELVAQRIHRDAENGVAV------AQLSKGRVDRKVVKQTVMTSVYGVTFI 776
Query: 534 GAREQIKRRLKERDVFSD--DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
GAR+QI +K+ + + D +++ AS Y A++T +L+EMF GAR+IM+WL CAK++
Sbjct: 777 GARQQITNAMKDHRLLTHLTDNEMYQASQYIAQLTFESLKEMFTGARNIMDWLATCAKLV 836
Query: 592 ASENQPVRWTTPLGLPVVQPYRKLGRH-IIKTSLQMLTLQRETDK--VMVKRQRTAFPPN 648
A + + V WTTPLGLPVVQPYR+ R ++T +Q + L+ E K V RQR+AFPPN
Sbjct: 837 AKKGRLVSWTTPLGLPVVQPYRRQSRTGTVETVVQSVALEHEPTKWPVYSNRQRSAFPPN 896
Query: 649 FVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
F+HSLD +HM++TA+ CK+ + +A VHDS+WTH VDDMN ILR KFV+L+ PIL+
Sbjct: 897 FIHSLDSTHMLLTAIHCKRQQITYASVHDSFWTHPATVDDMNTILREKFVQLHGRPILKQ 956
Query: 709 LLE 711
L E
Sbjct: 957 LRE 959
>N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletotrichum orbiculare
(strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF
240422) GN=Cob_00315 PE=4 SV=1
Length = 1358
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/715 (40%), Positives = 411/715 (57%), Gaps = 81/715 (11%)
Query: 57 EDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPS 116
E + RK V L+K+ K A M + + W P +R KVG+ L+ +++A I
Sbjct: 474 ESTESRKVVKPLVKEDK--AKESTMANVS----WPPAVRGKVGAALLAAFIESAKISKIR 527
Query: 117 DQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAK-NMVIPYM 173
+ V + +PAF H+ + K G++ G+I + ++ L R + + ++
Sbjct: 528 EDPVTKTLFSQSQPAFAHTTQL------KRGKQVGMILLNKELVSVLSREPPGDFLAKHL 581
Query: 174 PMLVPPVNWTGYDKGGHLFLPSYVMRT-HGVKQQREAVKRA-PKKQLEPVFEALDTLGHT 231
PMLVPP W +DKGG L + ++R G K QR + A + ++ V + LD LG T
Sbjct: 582 PMLVPPAPWKSFDKGGFLESKTSLVRVKQGDKDQRLYTEAAIARGDMDQVLKGLDVLGKT 641
Query: 232 KWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPD-TDDEAQIXXXXXXXXXXXXE 289
WRVN VL+V+ W SG RLA++ + +PLP+EP+ +DD ++ E
Sbjct: 642 AWRVNTPVLNVMLEAWNSGERLANMPPLNPQIPLPDEPEPSDDPSERRAWIKAVKAVENE 701
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
+SQRC + +L +AR +++ FY+PHN+DFRGRAYP+ +LNH+G+D RG+L F
Sbjct: 702 KGSLHSQRCYMNFQLEIARAFRNQ-TFYFPHNIDFRGRAYPIPTYLNHMGADNVRGLLRF 760
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
A+G+ LG+ G +WLK+HLAN++ G DK SLE R SF ++ +IFDSA+ PL G RWWL
Sbjct: 761 ANGKQLGERGLKWLKVHLANVF--GFDKASLEDRASFASDNLVNIFDSANNPLGGNRWWL 818
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
AEDP+QCLA C L A P ++SH+PVHQDG+CNGLQHYAALG D GA VNL
Sbjct: 819 QAEDPWQCLATCFELKAAFELPDPTKYVSHLPVHQDGTCNGLQHYAALGGDAWGARQVNL 878
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
G KPADVYS +A V + + DA+ A+ A L ++ RK+VKQTVMT+VYG
Sbjct: 879 EPGAKPADVYSAVADIVKEGIAKDAKAGNAM------AIALTGKITRKVVKQTVMTNVYG 932
Query: 530 VTYIGAREQIKRRLKE------RDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNW 583
VT+ GAR+Q+ R+L ++ D+ L + Y A++ AL MF+GA I W
Sbjct: 933 VTFSGARKQVCRQLDALYPELPKESGQDNIVL---ASYIARLIFQALGSMFRGAHDIQFW 989
Query: 584 LGE-----CAKV-------IASE--NQP----------------------------VRWT 601
LGE C + IA+E N P + WT
Sbjct: 990 LGEIGGRVCRALSPEQMSRIANEGVNNPQGRKKAAASSANTYKTSTQALLAEMRSTIVWT 1049
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TP+ +PV QPYR+ G II+TSLQ L+L +D V ++Q AFPPNF+HSLD +HM+
Sbjct: 1050 TPMRMPVAQPYRRSGTRIIRTSLQQLSLTVPERSDPVNRRKQLQAFPPNFIHSLDATHML 1109
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
++A+ C GL FA VHDS+WTHA D+DDMNR+LR F+ ++E ++ L FQ
Sbjct: 1110 LSALECHDLGLDFAAVHDSFWTHAADIDDMNRVLRNAFIRIHEEDVVGRLAAEFQ 1164
>Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) OS=Acanthamoeba
castellanii PE=2 SV=1
Length = 512
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/490 (50%), Positives = 336/490 (68%), Gaps = 17/490 (3%)
Query: 233 WRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEP-DTDDEAQIXXXX-XXXXXXXXEN 290
+ +N ++ V+ W +GG +ADL R ++P E P D + ++ N
Sbjct: 4 FSINNRMHEVICEAWDNGGGIADLPSRTNLPELEPPADYYSDLEVKQKFDRERKKAKIAN 63
Query: 291 RERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFA 350
+S RCD+ KL VA++ +D FYYPHN+DFRGR YP+ PHLNHLG D+CRG+L FA
Sbjct: 64 YNLHSLRCDVTYKLQVAKECQDR-TFYYPHNMDFRGRTYPIPPHLNHLGQDLCRGLLTFA 122
Query: 351 DGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLN 410
+G+PLG+SG +WLK+HLAN++ G DK++ E RV F E++++ I DSA PL G+RWWL
Sbjct: 123 EGKPLGESGLRWLKVHLANVF--GNDKITFEDRVRFVENNMEHIMDSASNPLGGQRWWLK 180
Query: 411 AEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 470
A+ P+QCLA I L A S PET++S +P+HQDGSCNGLQHYAALG D++GA VNL+
Sbjct: 181 ADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAALGGDEMGARQVNLL 240
Query: 471 AGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGV 530
E+P DVYSG+ V+ + DA I A+ L+ +VDRK++KQTVMTSVYGV
Sbjct: 241 PSERPQDVYSGVVELVVRRLEDDAANGVEI------AQRLLGKVDRKVIKQTVMTSVYGV 294
Query: 531 TYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKV 590
T+IGAR+QI+ LK++ SDD +F AS Y A T ++++EMF GAR IM WL +CA +
Sbjct: 295 TFIGARQQIENALKDKGKVSDD-DMFLASRYLATSTFSSIKEMFSGAREIMTWLSDCATL 353
Query: 591 IASENQPVRWTTPLGLPVVQPYRKLGR--HIIKTSLQMLTLQRETDK---VMVKRQRTAF 645
IA + +PV W TP+GLPVVQPYR G+ + T+LQ + L +E + V ++QRTAF
Sbjct: 354 IAKQGKPVTWVTPMGLPVVQPYRTKGKQTQTVVTALQNVMLVKEENDSLPVNTRKQRTAF 413
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPN+VHSLD +HMM+TA+ C +AGL +A VHDSYWTHA VD MN ILR FV+L+ P+
Sbjct: 414 PPNYVHSLDSTHMMLTALQCHEAGLTYASVHDSYWTHASSVDTMNHILRRTFVDLHSQPL 473
Query: 706 LENLLEGFQK 715
L++LL F++
Sbjct: 474 LDDLLAHFKR 483
>F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelphis domestica
GN=POLRMT PE=3 SV=2
Length = 1253
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/639 (41%), Positives = 384/639 (60%), Gaps = 38/639 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRK 147
K W V+ ++G++L+E+L+Q+ Y+ P S + P H + ++ ++
Sbjct: 588 KVWPDVLLVRLGTQLIEILVQSIYM-PNSLSPSQATKRFIPVLYHVYSFLSI------KQ 640
Query: 148 FGIIECDPLILKGLDRSAKNMV---IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-HGV 203
G I+ P ++ +D +A + + MPML PP+ WT + G ++ P+ +MR G
Sbjct: 641 IGFIKPHPSFIQLVDEAAYTTLTFDVSVMPMLCPPIPWTSPNFGAYVLHPTKLMRCLDGT 700
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVP 263
Q ++ ++ P+ QL V +AL LG+ W+VN+ VL +V I+ + G + DVP
Sbjct: 701 VQHQQLLESCPQGQLNAVLDALTQLGNCAWKVNQPVLDLVISIFNAKGN-----KKLDVP 755
Query: 264 LP-EEPDTDDEAQIXXXXXXXXXXXXEN---------RERYSQRCDIELKLAVARKMKDE 313
P E T ++ RE YS R D KL++A ++D+
Sbjct: 756 PPVSEAPTPPSYELSKGASSSEKAKLRREIAQCHKTAREMYSLRMDALYKLSIAHHLRDQ 815
Query: 314 EAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAG 373
F++PHN+DFRGRAYP PH NHLGSD+ R IL FA+G+PLG +G WLKIHL NL G
Sbjct: 816 -IFWFPHNMDFRGRAYPCPPHFNHLGSDMTRAILLFAEGKPLGPNGLDWLKIHLINL-TG 873
Query: 374 GVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSP 433
K SL+ R+++ ++DI DSAD PL GR+WW++ ++P+Q LA C+ + A+RS P
Sbjct: 874 LKKKESLQARLAYANEILEDILDSADNPLTGRKWWMDVDEPWQALACCMEIANAIRSPDP 933
Query: 434 ETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSD 493
+ISH P+HQDGSCNGLQHYAALG+D +GA +VNL+ + P DVYSG+A V ++ + D
Sbjct: 934 TAYISHFPIHQDGSCNGLQHYAALGQDVIGATSVNLMPCDVPQDVYSGVAQLVEELRKRD 993
Query: 494 AQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDT 553
A + +I A+ L ++RKLVKQTVMT VYGVT G R QI++RLKE D F +
Sbjct: 994 AAEGKSI------AQVLEGFINRKLVKQTVMTVVYGVTKYGGRLQIEKRLKELDDFPKE- 1046
Query: 554 KLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYR 613
++ AS Y +++ ++L EMF R I +WL + A VI+ V+W TPLGLP++QPY
Sbjct: 1047 HIWEASLYLSQLVFSSLGEMFSTTREIQDWLTKSAHVISKSGSAVQWVTPLGLPIIQPYH 1106
Query: 614 KLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGL 670
K + I +LQ L L +D K +Q+ AFPPNF+HSLD +HMM+TA++C + GL
Sbjct: 1107 KTQKMTIPGNLQSLCLSSCSDVNQKPNTLKQKNAFPPNFIHSLDSTHMMLTALSCHRKGL 1166
Query: 671 AFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
F VHD +WTHA VD MN + R +FV L+ PIL++L
Sbjct: 1167 TFVSVHDCFWTHASTVDIMNEVCREQFVNLHSQPILQDL 1205
>C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G18744g PE=3 SV=1
Length = 1289
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/677 (40%), Positives = 393/677 (58%), Gaps = 53/677 (7%)
Query: 68 LMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDG 122
LM ++ A R I K + W R K+GS L+ +L+ A ++ P +++ + G
Sbjct: 512 LMVQRARATFRSI-KIEESKVLWPQEARAKIGSILISMLIHVAKVKVEGVDPVTNEKIKG 570
Query: 123 SPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPV 180
PAF H ++ G K G+++ ++ L+ R + +PMLV P
Sbjct: 571 EA---PAFSHGYQY------HNGSKLGVLKIHRSLIHQLNGERLVAAVQPQLLPMLVKPR 621
Query: 181 NWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKV 239
W ++ GG+ + S ++R+ +Q +K ++ V+ L+ LG T W VN+K+
Sbjct: 622 AWNSWNSGGYYYTQSTLIRSKDSPEQVAYLKAVSDAGAIDNVYRGLNVLGETPWTVNRKM 681
Query: 240 LSVVDRIWASGGRLADL--VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQR 297
+V+ ++W SG D+ + P+ P D + E S R
Sbjct: 682 FNVMSQVWNSGKPFLDIPGIQEKLTLTPQPPRDADPSVHREWKLKNKELANEFSGNRSAR 741
Query: 298 CDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGK 357
CD KL +AR E+ FY+PHN+DFRGRAYP+ PH NHLG+D+ RG++ F G+ LG
Sbjct: 742 CDANYKLEIARAFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLMTFWHGKRLGS 800
Query: 358 SGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQC 417
+G +WLK+HL+NL+ G DK LE RV F E H+DDI DSA+ PL+G+ WW A+ P+Q
Sbjct: 801 TGLRWLKVHLSNLF--GFDKAPLEDRVRFAEDHIDDIRDSAEHPLDGKCWWKEADKPWQA 858
Query: 418 LAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 477
LA C+ L EAL+ S+P+ F+SH PVHQDG+CNGLQHYAALG D GA VNLV ++P D
Sbjct: 859 LATCMELNEALKMSNPDDFVSHQPVHQDGTCNGLQHYAALGGDIEGATQVNLVPSDRPQD 918
Query: 478 VYSGIAARVLD-IMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAR 536
VYS +A V+ + ++ A D A L +++ RK+VKQTVMT+VYGVTYIGA
Sbjct: 919 VYSHVAKLVVARLEKAAANGDET-------AALLKDKIKRKVVKQTVMTNVYGVTYIGAT 971
Query: 537 EQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-- 594
QI ++L +F+D + + S Y K ++ E+F+GA I +WLGECAK I+
Sbjct: 972 HQIDKQLST--LFNDHKRSYELSKYLTKHVFASVRELFEGAHLIQDWLGECAKRISKSIR 1029
Query: 595 -----------NQP-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKV 636
N+P V WTTPLGLP+VQPYR+ G+ + T+LQ + + + +
Sbjct: 1030 LDVDEKTLKNGNKPDFMSSVIWTTPLGLPIVQPYRENGKKQVATNLQTVFISDPFAINPI 1089
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
+RQ+ FPPNF+HSLD SHM+++A C + GL FA VHDSYWTHACDVD MN +LR +
Sbjct: 1090 NARRQKAGFPPNFIHSLDASHMLLSAAKCGEKGLDFAAVHDSYWTHACDVDTMNVVLREQ 1149
Query: 697 FVELYETPILENLLEGF 713
F++L+E ++E L + F
Sbjct: 1150 FIKLHEVDLIERLKDEF 1166
>A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, whole genome
shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00037338001 PE=4 SV=1
Length = 1035
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/547 (45%), Positives = 351/547 (64%), Gaps = 12/547 (2%)
Query: 173 MPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTK 232
+PM+ PP W GG+ P+ ++R Q EA KRA L+ +++ LD +
Sbjct: 468 LPMIYPPAKWMDTQIGGYYLKPTNLIRIQDQSLQEEAAKRA---NLQNLYDILDNISKVA 524
Query: 233 WRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRE 292
WRVN KVL++ ++W GG +A++ R E + R+
Sbjct: 525 WRVNNKVLNIAMQVWEQGGGIAEVPKRQHDKTYVFEHQIKECKSYEEKYQLLKMIQSQRD 584
Query: 293 RYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADG 352
YS +CD LKL VA + Y+PHN+DFRGR YP+ PHLNH+G D+ RG+LEF++G
Sbjct: 585 LYSLQCDFTLKLGVALAFNGCQKIYFPHNMDFRGRLYPIPPHLNHMGPDIARGLLEFSEG 644
Query: 353 RPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAE 412
+ LGKSG +WLKIHLAN G DKLS+E R ++ + +VD I A+ P++ + W E
Sbjct: 645 KKLGKSGLRWLKIHLAN--KMGKDKLSMEDREAYVDQNVDSIIKCAEDPIKYQD-WAQLE 701
Query: 413 DPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 472
D +Q LA A++S +PE + SH+ VHQDGSCNGLQHYAALGRD GA VNL
Sbjct: 702 DAWQSLAAMFDYVAAIKSPNPEEYESHLHVHQDGSCNGLQHYAALGRDVEGATQVNLANT 761
Query: 473 EKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTY 532
KP DVY+ +A V + DA KD ++ D + A L NQ+ RK+VKQTVMTSVYGVT+
Sbjct: 762 SKPGDVYTHVAGMVERRVEFDA-KD-SLSKDHIIALKLQNQIKRKIVKQTVMTSVYGVTF 819
Query: 533 IGAREQIKRRLKERDVFSDDTKL-FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
IGAREQI R+LK++ + +D L + AS Y A++TL A++++F+GA I WL +CA +I
Sbjct: 820 IGAREQIHRQLKDKGIIGEDEHLQYQASIYLARITLDAIKDLFEGAHKIKQWLIKCATII 879
Query: 592 ASENQPVRWTTPLGLPVVQPYRKLGRH-IIKTSLQMLTLQRETDKVMVK--RQRTAFPPN 648
++ENQPV W TPLGLPV+QPYR L ++ +KT + ++++ + + + +QR+AFPPN
Sbjct: 880 SNENQPVSWITPLGLPVIQPYRSLNKYDEVKTLISNVSIESDAAYLPINKVKQRSAFPPN 939
Query: 649 FVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
F+HSLD +H+M +++ C + G+ FA VHDSYWTHAC+VD +N +LR +FV L+ P+LE+
Sbjct: 940 FIHSLDSTHLMYSSIECLKQGITFAAVHDSYWTHACNVDKLNELLREQFVRLHSQPLLED 999
Query: 709 LLEGFQK 715
L + FQ+
Sbjct: 1000 LRDSFQR 1006
>C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_07902 PE=3 SV=1
Length = 1375
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/701 (38%), Positives = 400/701 (57%), Gaps = 58/701 (8%)
Query: 49 GESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKP---WGPVMRTKVGSRLVEL 105
E+ TE E L K + R M+ + +P W K+G+ L +
Sbjct: 504 NEAETE-NEAYYLNKTFRQMKVYNSTGKFRSYMQKHTEGRPPVHWPTSTEIKIGALLSSM 562
Query: 106 LMQTAYIQPPSDQIVDGSPDIR----PAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGL 161
L TA I P+ + ++R PAF H ++ + G G ++ +++ L
Sbjct: 563 LFSTAEI--PTSHKDPVTEEVRYVNEPAFQHVYQL------QKGHNVGYVQLHEKVVERL 614
Query: 162 DRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLE 219
+ + N++ ++PM+ PP W +GG L P V+RT Q + ++ A ++ LE
Sbjct: 615 RKEPSGNLLAKHLPMVSPPRPWVSNTQGGFLTQPVQVVRTRHDDAQNQYLQAASERGDLE 674
Query: 220 PVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXX 278
+++ L LG T W++N+ V V+ W SG +A++V + ++ PE+PD DD +
Sbjct: 675 ELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNITEPEKPDADDREAVKA 734
Query: 279 XXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHL 338
+ +SQRC + ++ +AR +E +FY PHN+DFRGRAYP+ P+ N +
Sbjct: 735 YYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYFNQM 793
Query: 339 GSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSA 398
G+D CRG+L F++GR LG+SG +WL+IHL+N++ G DK S + R F+ HVDDI DSA
Sbjct: 794 GADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFSIDHVDDILDSA 851
Query: 399 DKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 458
+ L+GRRWWL A DPFQCLA C+ L AL P ++SH+PVHQDGSCNGLQHYAALG
Sbjct: 852 NNGLKGRRWWLKAADPFQCLAACVELKNALSLPDPTKYVSHLPVHQDGSCNGLQHYAALG 911
Query: 459 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKL 518
D +GA VNL G++P+D+Y+ +A V + SDA+ I A+ + ++ RK+
Sbjct: 912 GDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDPI------AKLMDGKITRKV 965
Query: 519 VKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGA 577
VKQTVMT+VYGVT+IGA Q++R+L++ ++ ++ + + ++ +AL MF GA
Sbjct: 966 VKQTVMTNVYGVTFIGATRQVRRQLEDHYPELAETDEISKCAVHVSRAIFSALNSMFSGA 1025
Query: 578 RSIMNWLGECAKVIASE---------------------------NQPVRWTTPLGLPVVQ 610
I WLG+CA I N V WTTPL LPVVQ
Sbjct: 1026 HDIQFWLGDCANRITRSLNPSQIEEIRKELEAPSKTDIAKKLKFNNSVIWTTPLKLPVVQ 1085
Query: 611 PYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQA 668
PYR+ I TSLQ+ T++ R ++V ++Q AFPPNF+HSLD +HMM++A+ C +
Sbjct: 1086 PYREAKTRQIPTSLQLCTIKDIRGANEVNRRKQLQAFPPNFIHSLDATHMMLSAIKCDEL 1145
Query: 669 GLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
GL+F+ VHDS+WTHA D+D MNR+LR FV ++ I+ L
Sbjct: 1146 GLSFSAVHDSFWTHAGDIDKMNRVLRDAFVRMHSDDIVGRL 1186
>D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber melanosporum (strain
Mel28) GN=GSTUM_00011240001 PE=3 SV=1
Length = 1416
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 283/704 (40%), Positives = 407/704 (57%), Gaps = 56/704 (7%)
Query: 48 AGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLM 107
A S E++ + R +L+ K K A+ D + W ++ K+G L+ +L+
Sbjct: 496 ANMSKAELETIFRDRSAFRNLISKSKSASDL----DFEEIPEWPNTVKVKLGGVLISMLI 551
Query: 108 QTAYIQ-----PPSDQIVDGSPDI---RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILK 159
A I P + + S I PAF H + + GRK G+++ P ++K
Sbjct: 552 HVARIPVEAAVPGLTEGTESSEKIVQHLPAFQHCYEY------QRGRKLGVVKLHPELVK 605
Query: 160 --GLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK- 216
G D + +PM+V P+ WT +D+GG+ + S V+R +QR+ VK A ++
Sbjct: 606 RLGTDDLNFTAIGKSLPMVVRPLPWTDWDEGGYFYTRSKVVRIRESVEQRQYVKAAAERG 665
Query: 217 QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQ 275
L+ +F LD LG T WR+N++V VV +W A + + D+ P EP+ + + +
Sbjct: 666 HLDHLFAGLDVLGRTAWRINRRVFDVVLEVWNQEKAFAKIPALNPDINFPLEPEPNADPK 725
Query: 276 IXXXXXXXXXXXXENRER-YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPH 334
+ R+ +S RCD+ K+ +AR EE FY+PHN+DFRGRAYP+ P+
Sbjct: 726 VRWEWAREMKRVNTARKNNHSTRCDVNFKVEIARAFLFEE-FYFPHNIDFRGRAYPIPPN 784
Query: 335 LNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDI 394
LNH+G+D+ RG+L F++ + +G++G +W+KIHLANL G DK S RV+FTE ++++I
Sbjct: 785 LNHIGNDLSRGLLMFSEAKEVGETGLRWMKIHLANL--AGYDKASFSQRVAFTEENIENI 842
Query: 395 FDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHY 454
DSA+ PL G RWWL ++DP+Q LA C L EAL ++P + HIPV QDG+CNGLQHY
Sbjct: 843 HDSAENPLTGNRWWLKSDDPWQLLASCFALNEALSLNNPHEYKCHIPVAQDGTCNGLQHY 902
Query: 455 AALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQV 514
AALG D GA VNL + P DVY+G+A V + DA++ P A+ + LV
Sbjct: 903 AALGGDVAGARQVNLEPSDLPQDVYTGVAELVKASVELDAKRG---LPAAVALKDLVT-- 957
Query: 515 DRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMF 574
RK+VKQTVMT+VYGVT+IGAR QI+ +LK + D + S Y K +++EMF
Sbjct: 958 -RKVVKQTVMTNVYGVTFIGARNQIENQLKCIESL-DQKDIPALSLYLTKKVFDSIQEMF 1015
Query: 575 QGARSIMNWLGECAKVIASENQP---------------------VRWTTPLGLPVVQPYR 613
GA +I +WL CAK I+ +P V WTTPL LPVVQPYR
Sbjct: 1016 TGASAIQDWLVTCAKRISRSVRPNQLEHLKDPKTGEDSVHFMTSVVWTTPLRLPVVQPYR 1075
Query: 614 KLGRHIIKTSLQMLTLQRE--TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLA 671
++ I T+LQ + + DKV ++Q TAFPPNF+HSLD SHM+++A+ C +GL
Sbjct: 1076 QVASAAISTNLQTVYINDPYVIDKVDSRKQMTAFPPNFIHSLDASHMLLSALNCDASGLT 1135
Query: 672 FAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
FA VHDS+WTH DVD+MNRILR FV L+ I+ENL F++
Sbjct: 1136 FASVHDSFWTHPSDVDEMNRILRDSFVALHGKDIIENLKAEFEE 1179
>F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=2
Length = 1221
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/636 (42%), Positives = 371/636 (58%), Gaps = 32/636 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW + ++G RL ELL++T I P S G+ + P H SFR+
Sbjct: 552 QPWPLPVLVELGKRLAELLVETVRI-PGSLAAPQGACTLIPVLYHVYSFRSF-------- 602
Query: 146 RKFGIIECDPLILKGLDRSAKNMVI---PYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
R+ GI++ P + L +A++ +I +PML PP+ WT G L P+ +MR+
Sbjct: 603 RQIGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLE 662
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q + + P +L +AL LG+ WRVN +VL +V ++A+ G RL
Sbjct: 663 GTMQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPP 722
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P AQ RE +S R D +L++A+ ++ F
Sbjct: 723 SEAPRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLR-HRVF 781
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSD+ R +LEFA GRPLG G WLKIHL NL G
Sbjct: 782 WLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 840
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
L+ R+ F + +DDI DSAD+P+ GR+WW+ ++P+Q LA C+ + A+RS P F
Sbjct: 841 HEPLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTAF 900
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH PVHQDGSCNGLQHYAALGRD +GAA+VNL+ + P DVYSG+AA+V R DAQ+
Sbjct: 901 VSHFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQR 960
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI+RRL+E F + ++
Sbjct: 961 GVRV------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQEF-VW 1013
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++IA V W TPLG+P++QPY +
Sbjct: 1014 EASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRDS 1073
Query: 617 RHIIKTSLQMLTLQRE---TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFA 673
+ +I +Q LT T K +Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1074 KVMIGGGIQSLTFSNSGDTTQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFV 1133
Query: 674 GVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD +WTHA DV MN++ R +FV L+ PIL NL
Sbjct: 1134 SVHDCFWTHAADVAVMNQVCREQFVHLHSQPILHNL 1169
>A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassezia globosa (strain
ATCC MYA-4612 / CBS 7966) GN=MGL_3857 PE=3 SV=1
Length = 1358
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/710 (40%), Positives = 411/710 (57%), Gaps = 82/710 (11%)
Query: 62 RKKVIDLMKKQKIAAVRGIMKDQN---DTKPWGPVMRTKVGSRLVELLMQTAYIQPPS-D 117
++ +IDL ++ + A + +++N + W ++R +VGS LV+ L+ A + + D
Sbjct: 555 KRSLIDLAARRDLKAWQERCREENIETNVPKWTQIIRARVGSFLVQHLLDVATVHRKAYD 614
Query: 118 QIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP-YMPM 175
+ + + +PAF ++ + G+K G+I + ++ + LD+ S + + P ++PM
Sbjct: 615 RDGELWEEDQPAFYSAYEYIQ------GKKLGVIRLNEVVSQRLDKESVRETLHPRHLPM 668
Query: 176 LVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWR 234
LVPP W +D GG+ + + MR +Q ++ A + LE V LD LG+T W
Sbjct: 669 LVPPRPWLSHDSGGYYSMKTSAMRYKDSVEQSSYLRAASENHGLEVVLAGLDVLGNTAWN 728
Query: 235 VNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRE-- 292
VNK+V VV +IW SG L DL P E D + E R+
Sbjct: 729 VNKEVFDVVLQIWNSGEALGDL------PPAEMTDPEPERPPPDDIKAKGIYLQRLRQWN 782
Query: 293 -----RYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGIL 347
+SQRCDI KL +AR +E FY+PHN+DFRGRAYP+ PHLNH+G+D+CRG+L
Sbjct: 783 TIRSSNHSQRCDINYKLEIARSFLNER-FYFPHNMDFRGRAYPIPPHLNHIGNDLCRGLL 841
Query: 348 EFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRW 407
+FA+ +PLG+ G +WL+IHLAN++ G DK S R FT H DI DSA G+RW
Sbjct: 842 KFAEAKPLGEKGLRWLRIHLANVW--GYDKASFAEREQFTIDHEADIRDSATNAYHGKRW 899
Query: 408 WLNAEDPFQCLAVCITLTEAL-RSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WL A+DP+QCLA CI LT+A PE F S +PVHQDG+CNGLQHYAALG D GA
Sbjct: 900 WLQADDPWQCLATCIELTKAWDYPDGPEAFPSQLPVHQDGTCNGLQHYAALGGDLQGAKQ 959
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQK-DPAIFPDALHARTLVNQVDRKLVKQTVMT 525
VNL G++PADVY+G+A V++ + A++ DP A+ L +V RK+VKQTVMT
Sbjct: 960 VNLRGGDRPADVYTGVAELVIEQLNRRAEEGDPT-------AQLLRGKVTRKVVKQTVMT 1012
Query: 526 SVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWL 584
+VYGVT+IGA+ Q+ R+L +R D +++ ++ A+ Y AKV + + ++F GA I +WL
Sbjct: 1013 TVYGVTFIGAKNQVMRQLVDRGDTPAEE--VWTAASYLAKVIMDCIGDLFSGANMIQDWL 1070
Query: 585 GECAKVIASENQPVR---------------------------------------WTTPLG 605
A++IA P R WT+ LG
Sbjct: 1071 TITARMIAKSIPPERVPYAQMKVTRKGSKADPEAHTKRPSVTSREGREQMTSVIWTSALG 1130
Query: 606 LPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 663
LPVVQPYR++ +H I T++Q + ++ + +V +Q +AFPPNF+HSLD +HM +TA+
Sbjct: 1131 LPVVQPYRRIKKHQITTAVQSVYIRDPNQNFEVNTSKQASAFPPNFIHSLDATHMFLTAL 1190
Query: 664 ACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
C AGL FA VHDSYWTHACD+D M+ I+R FV L+ IL L + F
Sbjct: 1191 ECHSAGLVFASVHDSYWTHACDIDTMSDIIRDTFVRLHSQDILVRLRDEF 1240
>I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_12740 PE=3 SV=1
Length = 1536
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 288/714 (40%), Positives = 414/714 (57%), Gaps = 78/714 (10%)
Query: 61 LRKK-VIDLMKKQKIAAVRGIMKDQ---NDTKPWGPVMRTKVGSRLVELLMQTAYI-QPP 115
LRK+ +I+L + +I A + +++ + W +R +VGS LV+ LM A + +
Sbjct: 670 LRKRGLINLAARNEIRAWQKQQEEEGVLSSIPKWTQAVRARVGSYLVQHLMHVANVSRKA 729
Query: 116 SDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDR-SAKNMVIP- 171
+D+ DG + +PAF +++ + G+K G+I+ + +I + LD+ S + + P
Sbjct: 730 TDR--DGVLWEEDQPAFYSTYQYLG------GKKLGVIKLNEVIAQRLDKDSMQETLHPR 781
Query: 172 YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGH 230
++PMLVPP WT +D GG+ + MR +Q ++ A ++ + ALD LG+
Sbjct: 782 HLPMLVPPKPWTSHDSGGYYSVRQSAMRYKDSAEQGSYLRAASDTGDVDTILAALDVLGN 841
Query: 231 TKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDT--DDEAQIXXXXXXXXXXX 287
T W++NK + V+ IW SG A + D + P P++PD D
Sbjct: 842 TSWKINKPIFDVMLEIWNSGKDTAGMPPVDMEQPEPQKPDNYNHDMKARSVYLQRLKQWN 901
Query: 288 XENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGIL 347
+ +SQRCD+ KL +AR E FY+PHN+DFRGRAYPM PHLNH+G+D+CRG+L
Sbjct: 902 QQCASNHSQRCDVNYKLEIARAYLGER-FYFPHNMDFRGRAYPMPPHLNHIGNDLCRGLL 960
Query: 348 EFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRW 407
FAD +PLGK+G +WL+IH++N++ G DK S R F H DI DS ++ L+G+RW
Sbjct: 961 MFADAKPLGKTGLRWLRIHISNVF--GYDKASFGEREQFAIDHEADIRDSVERTLDGQRW 1018
Query: 408 WLNAEDPFQCLAVCITLTEAL-RSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
WL A+DP+QCLA C+ L AL PE + S++PVHQDG+CNGLQHYAALG D GA
Sbjct: 1019 WLKADDPWQCLAACMELKAALDHPDGPEAYESNLPVHQDGTCNGLQHYAALGGDLAGAKQ 1078
Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
VNL G++PADVYSG+A V+ ++ +A K + A L +V RK+VKQTVMT+
Sbjct: 1079 VNLSRGDRPADVYSGVADLVIKMLDEEAAKGERL------ATILQGKVTRKVVKQTVMTT 1132
Query: 527 VYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLG 585
VYGVT+IGA+ Q+ R+L R DV ++D LF A+ + AK+ ++ + +F GA+ I +WL
Sbjct: 1133 VYGVTFIGAKNQVMRQLAARGDVPAED--LFQAASFLAKIIMSCIGNLFSGAQKIQDWLI 1190
Query: 586 ECAKVIASE------------NQP------------------------------VRWTTP 603
AKVIA QP V WTT
Sbjct: 1191 FSAKVIAKSIPSQRVEEATRPYQPSETNLKRADARGYSRDPAKADRIVKEQMTSVIWTTA 1250
Query: 604 LGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 661
LGLPVVQPYRK + I T++Q + + +V +Q +AFPPNF+HSLD +HM++T
Sbjct: 1251 LGLPVVQPYRKTKKRQISTAMQTVFINDPHSNSEVSPAKQASAFPPNFIHSLDATHMILT 1310
Query: 662 AVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
A+ C AGL FA VHDSYWTHA D+D M+ ++R FV L+ IL L E F +
Sbjct: 1311 ALECHAAGLTFASVHDSYWTHAADIDTMSDMIRETFVRLHSQDILHRLREEFMQ 1364
>J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=1
Length = 1414
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/636 (42%), Positives = 371/636 (58%), Gaps = 32/636 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW + ++G RL ELL++T I P S G+ + P H SFR+
Sbjct: 552 QPWPLPVLVELGKRLAELLVETVRI-PGSLAAPQGACTLIPVLYHVYSFRSF-------- 602
Query: 146 RKFGIIECDPLILKGLDRSAKNMVI---PYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
R+ GI++ P + L +A++ +I +PML PP+ WT G L P+ +MR+
Sbjct: 603 RQIGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLE 662
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q + + P +L +AL LG+ WRVN +VL +V ++A+ G RL
Sbjct: 663 GTMQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPP 722
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P AQ RE +S R D +L++A+ ++ F
Sbjct: 723 SEAPRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLR-HRVF 781
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSD+ R +LEFA GRPLG G WLKIHL NL G
Sbjct: 782 WLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 840
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
L+ R+ F + +DDI DSAD+P+ GR+WW+ ++P+Q LA C+ + A+RS P F
Sbjct: 841 HEPLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTAF 900
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH PVHQDGSCNGLQHYAALGRD +GAA+VNL+ + P DVYSG+AA+V R DAQ+
Sbjct: 901 VSHFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQR 960
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI+RRL+E F + ++
Sbjct: 961 GVRV------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQEF-VW 1013
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++IA V W TPLG+P++QPY +
Sbjct: 1014 EASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRDS 1073
Query: 617 RHIIKTSLQMLTLQRE---TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFA 673
+ +I +Q LT T K +Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1074 KVMIGGGIQSLTFSNSGDTTQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFV 1133
Query: 674 GVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD +WTHA DV MN++ R +FV L+ PIL NL
Sbjct: 1134 SVHDCFWTHAADVAVMNQVCREQFVHLHSQPILHNL 1169
>M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna polymerase
protein OS=Eutypa lata UCREL1 GN=UCREL1_3776 PE=4 SV=1
Length = 1344
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/688 (40%), Positives = 399/688 (57%), Gaps = 81/688 (11%)
Query: 86 DTKPWGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKE 140
DT+ W +R KVG+ L+ L+ +A + P + ++ I+PA HS
Sbjct: 463 DTRSWPIYIRAKVGAVLLGALLDSAKVNVVREHPETKALIS---QIQPAMTHSI------ 513
Query: 141 AKKTGRKFGIIECDPLILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMR 199
+ GRK G++ + ++ + R + + ++PMLV P WT +DKGG L P++++R
Sbjct: 514 MHRRGRKVGVVLANKWLVDLMMREPRGEFLARHLPMLVEPEPWTRFDKGGFLNSPAHLVR 573
Query: 200 THG-VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV 257
T G K QR + A ++ +E V + LD LG T W+VN+ V V+ W SG +LA++
Sbjct: 574 TKGGEKDQRIYAEAALERGDMEQVSKGLDVLGRTAWQVNQNVFKVMLEAWNSGEKLANIP 633
Query: 258 D-RDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER--YSQRCDIELKLAVARKMKDEE 314
++P P EP D+ + EN + +S+RC I +L +AR KD+
Sbjct: 634 PLHPNIPTPPEPAPSDD-MMHRREWLKAVKAAENLKSGLHSERCFINFQLEIARAFKDQ- 691
Query: 315 AFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGG 374
FY+PHN+DFRGRAYP+ P+LNH+G+D RG+L FA GR LG+SG +WLK+HLAN++ G
Sbjct: 692 TFYFPHNMDFRGRAYPIPPYLNHMGADHARGLLRFAVGRELGESGLRWLKVHLANVF--G 749
Query: 375 VDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPE 434
DK SL+ R SF ++ +I DSAD PL G+RWWL AEDP+QCLA C L AL S P
Sbjct: 750 YDKASLKERESFAMDNLANIHDSADNPLNGQRWWLKAEDPWQCLATCFELKAALESPEPT 809
Query: 435 TFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDA 494
++SHIPV DG+CNGLQHYAALG D GA VNLV G++PADVYS +A V + + D
Sbjct: 810 KYVSHIPVQMDGTCNGLQHYAALGGDLWGAQQVNLVPGDRPADVYSAVANLVKENIAEDV 869
Query: 495 QKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDV----FS 550
+ D + A+ + ++ RK+VKQTVMT+VYGVT++GA+ Q+ LK+ D
Sbjct: 870 KADNFL------AKAIDGKITRKVVKQTVMTNVYGVTFVGAKAQV---LKQLDAAYPNLQ 920
Query: 551 DDTKLFGA--SCYAAKVTLTALEEMFQGARSIMNWLGECA-------------------- 588
++T + + + Y A AL MF+GA I WLGECA
Sbjct: 921 EETGVPTSLVASYVATKIFKALSTMFRGAHDIQYWLGECAGRVCRALTPEQLDLLADGTP 980
Query: 589 --------------------KVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLT 628
++++S + WTTPL +PVVQPYRK +++TSLQ L
Sbjct: 981 TPKPIKRRAPVKSKSKLAIDEILSSFRSTIVWTTPLRMPVVQPYRKTITRVVETSLQNLN 1040
Query: 629 LQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDV 686
LQ +D V ++Q FPPNF+HSLD SHM+++A+ C + GL+FA VHDS+WTHA D+
Sbjct: 1041 LQIPERSDPVNRRKQLQGFPPNFIHSLDASHMLLSALECDELGLSFAAVHDSFWTHAADI 1100
Query: 687 DDMNRILRGKFVELYETPILENLLEGFQ 714
D MNR+LR FV ++ ++ L F+
Sbjct: 1101 DTMNRVLRDAFVRIHCEDVIGRLGAEFE 1128
>Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family protein
OS=Tetrahymena thermophila (strain SB210)
GN=TTHERM_01119540 PE=4 SV=1
Length = 1410
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/680 (38%), Positives = 404/680 (59%), Gaps = 49/680 (7%)
Query: 59 EKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWG-------PVMRTKVGSRLVELLMQTAY 111
++ +K + D K+ + + K +N T ++ K+GS L+ L+ +T
Sbjct: 580 QRAKKYLADKTKEANQKIMESLYKKKNSTSKLNYQEIGIPKTIQLKIGSLLIYLMKETIQ 639
Query: 112 IQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP 171
I+ + ++H K++K G+I + + L ++ P
Sbjct: 640 IRNEQN-----------FWIHLLVPSYKKSKNNDGYVGVININEDFIISLYEQSEKSESP 688
Query: 172 YM------PMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEAL 225
+M PM+ P W Y+ GG+ P+ +MR H Q + + + L ++ L
Sbjct: 689 FMHLERCLPMIYKPAPWQDYEIGGYYQRPTNLMRIHESPIQEKVLSYSD---LSKMYNIL 745
Query: 226 DTLGHTKWRVNKKVLSVVDRIWASGG-------RLADLVDRDDVPLPEEPDTDDEAQIXX 278
+T+ T WR+NKKV V+++IW GG R D D +E DE Q
Sbjct: 746 NTVSQTAWRINKKVFDVMEKIWEEGGGQGEIPRRFYDYKDYVYQYQLKECKNRDEQQ--- 802
Query: 279 XXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHL 338
E R+ +S R D +LK+ VA+ ++ E Y+PHNVDFRGR YP+ PHLNH+
Sbjct: 803 ---RLMKKIQEQRDMHSMRSDFQLKINVAKAFRNIEKIYFPHNVDFRGRIYPIPPHLNHM 859
Query: 339 GSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSA 398
G+D+ RG+LE+++ + +GK+G WLK+HL+NL G DKLS RV+F ES +++ A
Sbjct: 860 GADISRGLLEYSESKKIGKTGWYWLKVHLSNLL--GQDKLSFPERVAFAESQFENVKRWA 917
Query: 399 DKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 458
PL+ R W+ ED +Q LA + EAL+ +PE +ISH+ VH DGSCNGLQHYAA+G
Sbjct: 918 SDPLKHRE-WIQVEDAWQALATIFDVAEALKLENPEDYISHLHVHMDGSCNGLQHYAAIG 976
Query: 459 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKL 518
RDK GA VNL+ +KP D+YS +A V + DA D A + +A+ A+ L + RK+
Sbjct: 977 RDKDGAMQVNLMNAQKPGDLYSHVARMVEQRVGKDANDDLAKY-NAI-AKKLSGNIKRKV 1034
Query: 519 VKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGAR 578
VKQTVMTSVYGVT++GAR+QI ++L+++D +++ + + AS Y A+ TL ++++F A
Sbjct: 1035 VKQTVMTSVYGVTFVGARKQIYKQLRDKDFLTEE-EAYEASYYLAQTTLDCIKDLFSSAH 1093
Query: 579 SIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGR-HIIKTSLQMLTLQRETDKVM 637
I WL CA +IA+ + PV W TP+GLPVVQPYR G+ +I T +Q + +++++D++
Sbjct: 1094 YIKKWLINCAGLIANTSNPVSWITPMGLPVVQPYRSKGQLDVINTVIQKIAVEQDSDRLP 1153
Query: 638 VK--RQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRG 695
+ +QR+AFPPN++HSLD +H+M TA+ C + G+ FA VHDSYWTHACD+++M++ILR
Sbjct: 1154 INKSKQRSAFPPNYIHSLDSTHLMYTALECIKRGMHFAAVHDSYWTHACDIEEMHKILRE 1213
Query: 696 KFVELYETPILENLLEGFQK 715
+FV+L+ P+LE+L F++
Sbjct: 1214 QFVKLHSQPLLEDLKASFER 1233
>H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) OS=Oryzias latipes
PE=3 SV=1
Length = 1177
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/648 (41%), Positives = 389/648 (60%), Gaps = 48/648 (7%)
Query: 84 QNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--PAFVHSFRTVTKEA 141
Q D W ++ ++G+ LV+++++ I + I++ S D + P H +
Sbjct: 509 QGDDTSWPHIVTLELGTHLVDIMVKNLKI---NSDILNPSQDRKLIPILYHMY------T 559
Query: 142 KKTGRKFGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYV 197
++ R+ G I+ P++++ + + A + + MPML PPV WT G ++ P+ +
Sbjct: 560 FRSTRQVGFIKPHPILVQ-MQQEAMETRLTFDSYVMPMLCPPVPWTSVKFGAYVLTPTKL 618
Query: 198 MRT-HGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL 256
MRT G Q + ++++ + LEPVF++L+ LG+ W++NK +L ++ I+ G
Sbjct: 619 MRTVEGATQHEQLLEKS--QHLEPVFDSLNQLGNCAWKINKPLLDIIISIFNDRGS---- 672
Query: 257 VDRDDVPLP--EEP-----DTDDEA----QIXXXXXXXXXXXXENRERYSQRCDIELKLA 305
D+ D+P P E P + D A Q + E +S R D KL+
Sbjct: 673 -DKLDIPPPMSEAPKIPHFNPQDPAYTASQKALMKREVINAKKKGSEMHSLRMDALYKLS 731
Query: 306 VARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKI 365
+A M+ EE F++PHN+DFRGR YP P+ NHLGSDV R +L FA+G+PLG G WLKI
Sbjct: 732 IAHHMR-EETFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAMLVFAEGKPLGPKGLDWLKI 790
Query: 366 HLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLT 425
HL NL G + SL+GR+ + S ++DI DSAD PL GR+WW+NA++P+Q LA C+ +
Sbjct: 791 HLVNL-TGLKKRSSLQGRLQYANSIMEDILDSADNPLHGRKWWMNADEPWQALACCMEIA 849
Query: 426 EALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 485
A RS P F+SH PVHQDGSCNGLQHYAALGRD +GA +VNLV + P DVYSG+A +
Sbjct: 850 RAARSPDPAKFVSHFPVHQDGSCNGLQHYAALGRDVIGATSVNLVPCDVPQDVYSGVAQQ 909
Query: 486 VLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE 545
V ++ DA+ I A+ L + RK+VKQTVMT VYGVT G R QI++RLKE
Sbjct: 910 VEELRARDARDGLKI------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKE 963
Query: 546 RDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLG 605
+ F + ++ AS Y ++ L+EMF G R I +WL E A++I+ V W TPLG
Sbjct: 964 IENFPKE-HIWDASHYLVRLVFNGLKEMFTGTREIQDWLTESARLISKCGHTVEWVTPLG 1022
Query: 606 LPVVQPYRKLGRHI-IKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMT 661
LP++QPY + + +K+S+Q + LQ D + +Q+ AFPPNF+HSLD +HMM+T
Sbjct: 1023 LPIIQPYHRTRNQVQLKSSIQHINLQISHDSKERPDTVKQKNAFPPNFIHSLDSTHMMLT 1082
Query: 662 AVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
A+ C AGL F VHD +WTHA VD MN++ R +FV L+ PIL+ L
Sbjct: 1083 ALHCYSAGLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQEL 1130
>B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 576
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/545 (44%), Positives = 349/545 (64%), Gaps = 21/545 (3%)
Query: 174 PMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKW 233
PM+VPP W+ D+GG+ L + ++R HG Q+E ++ L VF+ L+ LG W
Sbjct: 19 PMIVPPKPWSRPDEGGYKMLRTELLRYHGCNMQKEVLQNV---DLSIVFDGLNALGRVPW 75
Query: 234 RVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER 293
R+N++VL+V R W + L D+ +DD PLPEEP + E+ +
Sbjct: 76 RINQRVLTVAQRCWDNNIPLGDIPSKDDNPLPEEPLHPKRQE---QFWEPETPGYESYDL 132
Query: 294 YSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGR 353
S RC LKL A K K+ E ++P+N+DFRGRAYP+ PHL+++GSD+CRG+L+FA+ +
Sbjct: 133 RSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPHLSNVGSDLCRGVLKFAEAK 192
Query: 354 PLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAED 413
PLG G WLK+HLAN G DK+S + RV F + +++ + SA+ P G RWW++ ED
Sbjct: 193 PLGPRGLYWLKVHLANF--AGKDKMSFDDRVKFVDDNLEQVRLSAEDPFAGERWWMSLED 250
Query: 414 PFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 473
PFQ LA C+ + +A+ +PE+F+ +PVH DGSCNGLQHYAALGRD +G AVNL A +
Sbjct: 251 PFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHYAALGRDSVGGKAVNLCAYD 310
Query: 474 KPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYI 533
+P DVY G+ V + R + + A A+ + +DR +VK+TVMTSVYGVTYI
Sbjct: 311 EPQDVYVGVMHEV--VRRKELSYNRA-------AKLVNGLIDRGVVKRTVMTSVYGVTYI 361
Query: 534 GAREQIKRRL--KERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI 591
GAR+QI+ ++ K DV ++F A Y A +T+ + ++F GAR MNWL CA++I
Sbjct: 362 GARQQIQEKIISKGHDVDEMSNEIFQACGYVASLTMEVMGDLFTGARETMNWLTTCARMI 421
Query: 592 ASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQR--TAFPPNF 649
P+ W +P+GLP +QPYR+ I T LQ +TL E+D + + +QR +AFPPNF
Sbjct: 422 TQHGFPLAWVSPIGLPAIQPYRQKKAATIVTLLQTVTLINESDDLPIHKQRQVSAFPPNF 481
Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
+HSLD SHM++TA+ + GL F+ VHDS+WTHACD+D+MN LR FV+LY P+LE L
Sbjct: 482 IHSLDSSHMLLTALEMDRRGLTFSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERL 541
Query: 710 LEGFQ 714
+ ++
Sbjct: 542 KQTWE 546
>Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=CHGG_04340 PE=3 SV=1
Length = 1414
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/676 (39%), Positives = 386/676 (57%), Gaps = 68/676 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYI--QPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRK 147
W +++ KVG+ L+ LM TA I Q + + +PAF H+ + K GRK
Sbjct: 573 WPMLIKAKVGAVLLAALMDTAKIVVQREHPETKEKLSQTQPAFTHAVQL------KKGRK 626
Query: 148 FGIIECDPLILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMR--THGVK 204
G+I+ + +++ + R + + ++PM+V PV W+ +DKGG + P+ ++R H
Sbjct: 627 IGVIQPNRELIELMKREPRGEALARHLPMVVEPVPWSKFDKGGFISAPTPLIRLKNHEKD 686
Query: 205 QQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVP 263
Q+ A + +E + LD LG T W++N+ V V+ W +G A+L D +P
Sbjct: 687 QRIYAEAAIERGDMEQMMRGLDVLGKTAWKINRPVFDVMLEAWNTGEEFANLPALDPKIP 746
Query: 264 LPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNV 322
+P EPD TDD + E +S RC + +L +AR +D+ FY+PHN+
Sbjct: 747 IPAEPDSTDDPMKKRVWLRSVKAAENEKSGLHSVRCFMNFQLEIARAFRDQ-TFYFPHNI 805
Query: 323 DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEG 382
DFRGRAYPM +LNH+G+D RG+L FA G+PLG+ G WLK+ L+N+Y G DK SL+
Sbjct: 806 DFRGRAYPMPTYLNHMGADHMRGLLLFAKGKPLGEKGLAWLKVQLSNVY--GFDKASLQE 863
Query: 383 RVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPV 442
R F +++++IFDSAD PL G+RWWL AEDP+QCL C L AL S P ++SH+PV
Sbjct: 864 REDFATNNLENIFDSADNPLTGKRWWLQAEDPWQCLGACFELKAALSSPDPAAYVSHLPV 923
Query: 443 HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFP 502
HQDG+CNGLQHYAALG D GA VNL+ GE+PADVY+ +A V + ++ + +
Sbjct: 924 HQDGTCNGLQHYAALGGDTWGAQQVNLLPGERPADVYAAVAQLVQEEVKQELAEGNEF-- 981
Query: 503 DALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS--- 559
A+ + +++RK+VKQTVMT+VYGVT++GA++Q++++L ++ + + G S
Sbjct: 982 ----AKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQVQKQLD--SIYPNIEQETGLSSTV 1035
Query: 560 --CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR------------------ 599
Y A T L MF+GA I NWLGE + P +
Sbjct: 1036 LASYLAGKVFTGLSTMFRGAHDIQNWLGEIGGRVCRALTPEQIDRLAGGSTEEAKTKKAS 1095
Query: 600 -------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMV 638
WTTPL +PVVQPYRK G +I T LQ L L D V
Sbjct: 1096 KSKADIEEEMNGYFRNTLVWTTPLRMPVVQPYRKSGTRMISTCLQDLILTNLDRDDPVNR 1155
Query: 639 KRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFV 698
++Q AFPPNF+HSLD SHMM++A+ C GL FA VHDS+WTHA DVDDMN ++R F+
Sbjct: 1156 RKQLQAFPPNFIHSLDASHMMLSALECNAIGLTFAAVHDSFWTHAADVDDMNAVIRDSFI 1215
Query: 699 ELYETPILENLLEGFQ 714
+++ ++ L F+
Sbjct: 1216 RIHQEDVIGRLKAEFE 1231
>M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphophorus maculatus
GN=POLRMT PE=3 SV=1
Length = 1321
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/641 (41%), Positives = 382/641 (59%), Gaps = 47/641 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--PAFVHSFRTVTKEAKKTGRK 147
W V+ ++G+ +V+++++ I + I++ + D + P H + ++ R+
Sbjct: 654 WPYVLMLELGTFIVDIMVKNLKI---NSDILNPAYDRKCIPILYHMY------TFRSTRQ 704
Query: 148 FGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYVMRT-HG 202
G I+ P IL + + A + + MPML PPV WT G +L P+ +MRT HG
Sbjct: 705 VGFIKPHP-ILTQMQQEAMETTLTFDSSVMPMLCPPVPWTSEKFGAYLLTPAKLMRTTHG 763
Query: 203 VKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
Q E +++ P L PVF++L+ L + W +NK +L ++ I+ G D+ D+
Sbjct: 764 ATQHEELLEKCP--NLHPVFDSLNQLSNCAWMINKPILDIIISIFNDRGS-----DKLDI 816
Query: 263 PLP--EEP-----DTDDEAQIXXXXXXXXXXXXENR----ERYSQRCDIELKLAVARKMK 311
P P E P + D A + E +S R D KL++A M+
Sbjct: 817 PPPLSEAPKIPHFNPQDPAYTASEKAHMKREVINAKKKCSEMHSLRMDALYKLSIAHHMR 876
Query: 312 DEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLY 371
D+ F++PHN+DFRGR YP P+ NHLGSDV R L FA+G+PLG G WLKIHL NL
Sbjct: 877 DK-LFWFPHNMDFRGRTYPCPPYFNHLGSDVTRATLMFAEGKPLGPKGLDWLKIHLVNL- 934
Query: 372 AGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSS 431
G + SL+GR+ + +S ++DI DSAD PL G++WW+ A++P+Q LA C+ + A+RS
Sbjct: 935 TGLKKRSSLQGRLEYADSIMEDILDSADNPLNGKKWWMEADEPWQALACCMEIANAVRSP 994
Query: 432 SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR 491
P F+SH PVHQDGSCNGLQHYAALGRD +GA +VNL+ E P DVYSG+A +V ++
Sbjct: 995 DPTKFVSHFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEVPQDVYSGVAQQVEELRT 1054
Query: 492 SDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSD 551
DA K I A+ L + RK+VKQTVMT VYGVT G R QI++RLKE D F
Sbjct: 1055 RDAAKGLKI------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPK 1108
Query: 552 DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQP 611
+ ++ AS Y ++ + L+EMF G R I +WL E A++I+ V W TPLGLP++QP
Sbjct: 1109 E-HVWDASHYLVRLVFSGLKEMFTGTREIQDWLTESARLISKCGHTVEWVTPLGLPIIQP 1167
Query: 612 YRKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQA 668
Y + ++K+++Q + LQ D + +Q+ AFPPNF+HSLD +HMM+T++ C A
Sbjct: 1168 YHRTRNLVLKSTMQHINLQISHDTKERPDTVKQKNAFPPNFIHSLDSTHMMLTSLHCYSA 1227
Query: 669 GLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
GL F VHD +WTHA VD MN+I R +FV L+ PIL+ L
Sbjct: 1228 GLTFVSVHDCFWTHALTVDTMNKICREQFVALHSQPILQGL 1268
>G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2310823 PE=3 SV=1
Length = 1402
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/688 (39%), Positives = 388/688 (56%), Gaps = 84/688 (12%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ K G+ ++ LM TA I P + + V ++PAF H+ + K
Sbjct: 552 WPIAIKAKFGAVILGALMDTAKIVVEREHPETKEKVT---QVQPAFTHTVQL------KK 602
Query: 145 GRKFGIIECDPLILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMR--TH 201
GR+ G+I+ + +++ + R + + ++PM+V P W+ +DKGG + PS ++R H
Sbjct: 603 GRRVGVIQPNRSLIELMKREPRGEALARHLPMVVEPEPWSKFDKGGFITSPSPLVRLKNH 662
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD- 260
Q+ A + +E + LD LG T W++N+ V V+ W +G A+L D
Sbjct: 663 EKDQRIYAEAAIERGDMEQMMRGLDVLGKTAWKINRPVFDVMLEAWNTGEEFANLPALDP 722
Query: 261 DVPLPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
+P+P EPD TDD + E +S RC + +L +AR +D+ FY+P
Sbjct: 723 KIPIPPEPDSTDDPMKRRLWLRAVKAAENEKSGLHSVRCFMNFQLEIARAFRDQ-TFYFP 781
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ +LNH+G+D RG+L FA GRPLGKSG WLK+HL+N+Y G DK S
Sbjct: 782 HNIDFRGRAYPIPTYLNHMGADNMRGLLLFAKGRPLGKSGLAWLKVHLSNVY--GFDKAS 839
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ R F + ++++IFDSAD PL G+RWWL AEDP+QCLA C L AL S P ++SH
Sbjct: 840 LKEREEFADRNLENIFDSADNPLTGKRWWLQAEDPWQCLATCFELKAALSSPDPTAYVSH 899
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
+PVHQDG+CNGLQHYAALG D GA VNL+ G++PADVYS +A V + D
Sbjct: 900 LPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVYSAVAELVQKQVTEDLANGNE 959
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG-- 557
A+ + ++ RK+VKQTVMT+VYGVT++GA++Q++++L ++ D K G
Sbjct: 960 F------AQAMDGKITRKVVKQTVMTNVYGVTFVGAKKQVQKQLD--SLYPDIEKETGLS 1011
Query: 558 ----ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR-------------- 599
AS AAKV + AL MF+GA I NWLGE + P +
Sbjct: 1012 SGVLASYIAAKVFM-ALSTMFRGAHDIQNWLGEIGGRVCRAVTPEQLDRIAEASGEKVGS 1070
Query: 600 -------------------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLT 628
WTTPL +PVVQPYRK G +I T LQ L
Sbjct: 1071 GEESKSTKKKAKASSKAGDEDLASHFRNTLVWTTPLRMPVVQPYRKSGTRLISTCLQDLV 1130
Query: 629 LQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDV 686
L D V ++Q AFPPNF+HSLD SHMM++A+ C GL FA VHDS+WTHA DV
Sbjct: 1131 LTNVDRDDPVNRRKQLQAFPPNFIHSLDASHMMLSALECDAIGLTFAAVHDSFWTHAADV 1190
Query: 687 DDMNRILRGKFVELYETPILENLLEGFQ 714
D MNR++R F+ +++ ++ L F+
Sbjct: 1191 DAMNRVIRDAFIRIHQEDVIGRLKSEFE 1218
>G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0G03060 PE=3 SV=2
Length = 1354
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/654 (40%), Positives = 376/654 (57%), Gaps = 50/654 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ L+ A I P + V G PAF HS++
Sbjct: 598 WPQAVRAQIGSILISTLIHVAKIDVEGFDPITKTKVYGEA---PAFAHSYQYCN------ 648
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+I+ ++ L+ R ++ +PMLV P W + GG+ + S ++R+
Sbjct: 649 GMKLGVIKIHKALINQLNGERLVASVQPQLLPMLVEPREWKNWRSGGYFYTQSTLIRSKE 708
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL--VDR 259
+Q +K K+ ++ V+ L+ LG T W VNK++ ++ ++W G D+ +
Sbjct: 709 SPEQLAYLKAVSDKEAIDDVYNGLNALGKTAWTVNKRLFEIISKVWNEGIEFLDIPQIQY 768
Query: 260 DDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
D +P P D + + + + S RCD KL +AR E+ FY+P
Sbjct: 769 DMQLIPPPPRNSDPSILREWKLQNKEIANKISKNRSIRCDTNYKLEIARAFLGEK-FYFP 827
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG G WLKIH ANLY G+DK+
Sbjct: 828 HNLDFRGRAYPLSPHFNHLGNDLSRGLLIFWKGKKLGPDGLSWLKIHCANLY--GMDKIP 885
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
R+ F E H++D+ D+A+ PL+G+ WW A+ P+Q LA CI L EAL+ +PE FISH
Sbjct: 886 FTERIQFIEDHIEDVKDTAENPLDGKGWWKKADKPWQLLATCIELNEALKLDNPEDFISH 945
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNL+ E+P DVY +A ++++ +K A
Sbjct: 946 QPVHQDGTCNGLQHYAALGGDVEGATQVNLIPNERPQDVYRHVA----NLVKKRLEK--A 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+ A LV+++ RK+VKQ VMT+VYGVTY+GA QI+++L E F D + F S
Sbjct: 1000 VLAGDKKAELLVDKITRKVVKQPVMTNVYGVTYVGATFQIEKQLSE--YFPDRKQCFDLS 1057
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y + E+F A I +WLGECAK I N+P V WT
Sbjct: 1058 KYLTFHVFATIRELFHSAHLIQDWLGECAKRITKSIRLDVDGKSFKNGNKPDFMSSVIWT 1117
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + + T+LQ + + + V +RQ+ FPPNF+HSLD SHM+
Sbjct: 1118 TPLGLPIVQPYREATKKQVMTNLQTIFISDPFAINGVNARRQKAGFPPNFIHSLDASHML 1177
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
++A+ CK+ GL FA VHDSYWTHACDV+ M+ LR +F+EL++ ++E L + F
Sbjct: 1178 LSAIKCKENGLEFASVHDSYWTHACDVNKMSVYLRDEFIELHKVDLIERLKDEF 1231
>L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_14389 PE=3
SV=1
Length = 1383
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/668 (40%), Positives = 388/668 (58%), Gaps = 58/668 (8%)
Query: 89 PWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGR 146
PW ++ K+G+ L+ L++TA I+ +Q V + +PAF H+ R K G+
Sbjct: 541 PWPVAVKVKLGAMLLTALLETAKIKVVQEQPVTQTLIHQYQPAFSHALRL------KRGK 594
Query: 147 KFGIIECDPLILKGLDRSAK-NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-HGVK 204
K G+I + ++ + + + + ++PM+VPP WT ++KGG L S V+R G K
Sbjct: 595 KIGMILLNKTLVTIMKSEPRGDYLAKHLPMVVPPEPWTDFNKGGFLESSSAVVRVKQGDK 654
Query: 205 QQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD-RDDV 262
+Q+ + A + ++ VF+ LD LG T WR+N V +V+ W +G A+ + D+
Sbjct: 655 EQKLYAEAAITRGDMDQVFKGLDILGKTAWRINTPVFNVMLEAWNTGKAFANFPELSPDI 714
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRE--RYSQRCDIELKLAVARKMKDEEAFYYPH 320
P EP+ D+ + EN++ +SQRC + +L +AR +++ +FY+PH
Sbjct: 715 AYPPEPELSDDP-MARRNWIRTVKAIENKKGALHSQRCFMNFQLEIARAFRNQ-SFYFPH 772
Query: 321 NVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSL 380
NVDFRGRAYP+ +LNH+G+D RG+L FA G+ LG+ G QWLK+HLAN+Y G DK SL
Sbjct: 773 NVDFRGRAYPLPTYLNHMGADHVRGLLRFAKGKELGERGLQWLKVHLANVY--GFDKASL 830
Query: 381 EGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHI 440
+ R SF ++ +IFDSA+ PL G WWL AEDP+QCLA C L AL S P ++SH+
Sbjct: 831 KDRESFAMENLVNIFDSANNPLTGNMWWLKAEDPWQCLATCYELKAALESPEPTKYVSHL 890
Query: 441 PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAI 500
PVHQDG+CNGLQHYAALG D GA VNL +KPADVYS +A V D + D + I
Sbjct: 891 PVHQDGTCNGLQHYAALGGDTWGAEQVNLAPSDKPADVYSAVANIVKDHIAKDVEVKHPI 950
Query: 501 FPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE-RDVFSDDTKL--FG 557
A L ++ RK+VKQTVMT+VYGVT+ GAR+QI ++L ++T +
Sbjct: 951 ------AMGLNGKITRKVVKQTVMTNVYGVTFAGARKQICKQLDALYPELREETGVNNLT 1004
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP-------------------- 597
++ Y A + AL MF+GA I WLGE + P
Sbjct: 1005 SATYIAGLVFKALSTMFKGAHDIQYWLGEIGGRVCKAVTPEQIELISQDGLSEASKVSRS 1064
Query: 598 ---------VRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFP 646
+ WTTPL +PV QPYRK G II T+LQ T+ +D V K+Q AFP
Sbjct: 1065 DMLSQFRATIVWTTPLRMPVAQPYRKHGTRIIHTALQDMSFTVPERSDPVHAKKQLQAFP 1124
Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
PNF+HSLD +HM+++A+ C + GL FA VHDS+WTHA DVD MNR+LR F+ ++E ++
Sbjct: 1125 PNFIHSLDATHMLLSALECNELGLDFAAVHDSFWTHAADVDSMNRVLRDAFIRIHEEDVV 1184
Query: 707 ENLLEGFQ 714
L F+
Sbjct: 1185 GRLATEFE 1192
>K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_200200 PE=3 SV=1
Length = 967
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/668 (39%), Positives = 398/668 (59%), Gaps = 61/668 (9%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRK 147
W V R+K+G LV+ LM+ A ++ + ++ +G +++PAF H++ + G +
Sbjct: 189 WSQVTRSKIGGILVDCLMEVAEVERTA-KLENGEKVSEMQPAFHHAYEYLR------GSR 241
Query: 148 FGIIECDPLILKGLDRSA-KNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQ 205
G+I +P++ + L K+ + P ++PMLV P W ++ GG+L+ + VMR +
Sbjct: 242 LGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSVMRFKDSIE 301
Query: 206 QREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR-DDVP 263
Q+ +K A K Q+E V+ LD L T W++NKKV VV R W SG RL + D P
Sbjct: 302 QQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKVPPAMYDGP 361
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRER---YSQRCDIELKLAVARKMKDEEAFYYPH 320
P +P ++ A + N+ + +S RC + KL +AR ++E FY+PH
Sbjct: 362 EPVQPQVEELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEIARAFLNDE-FYFPH 420
Query: 321 NVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSL 380
N+DFRGRAYP+ HLNH+G D+CRG+L FA+ +PLG G +WLKIH+ANLY G DK +
Sbjct: 421 NLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANLY--GYDKANF 478
Query: 381 EGRVSFTESHVDDIFDSADKPLEG---RRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
+ RV++ + H+D I+ +A + L+ + WWL A DP+Q LA I L +AL S +PE F
Sbjct: 479 DDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIELHDALESGNPEAFE 538
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
S +PVHQDG+CNGLQHYAALG D GA VNL A +KP+DVYS + A V + + D +
Sbjct: 539 SSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVEEAIAKDCESG 598
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
+A L ++ RK+VKQTVMT+VYGVT+IGAREQI+++LK+R ++ + +
Sbjct: 599 DK------YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRKDIPEE-ECWS 651
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA------------------------- 592
A+ Y A++ L + +F+GA+SI WL A+++A
Sbjct: 652 AAAYLARLVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPELMAEAAAVKKGQLPM 711
Query: 593 -----SENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAF 645
+ V WTTPLGLP+VQPYRK+ R I T++Q + + +V +Q +AF
Sbjct: 712 NRLKKEQMTSVIWTTPLGLPIVQPYRKIARKQIDTAIQTVYISDPNRLAEVNSAKQASAF 771
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPN++HSLD +HMM+TA+ C++ L FA VHDSYWTHA D+D+M+ +R F+ L+ + +
Sbjct: 772 PPNYIHSLDATHMMLTALECRKKNLTFASVHDSYWTHAADIDEMSSTIRDTFIALHSSDV 831
Query: 706 LENLLEGF 713
L L F
Sbjct: 832 LGQLRREF 839
>K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_69188 PE=3 SV=1
Length = 967
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/668 (39%), Positives = 398/668 (59%), Gaps = 61/668 (9%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRK 147
W V R+K+G LV+ LM+ A ++ + ++ +G +++PAF H++ + G +
Sbjct: 189 WSQVTRSKIGGILVDCLMEVAEVERTA-KLENGEKVSEMQPAFHHAYEYLR------GSR 241
Query: 148 FGIIECDPLILKGLDRSA-KNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQ 205
G+I +P++ + L K+ + P ++PMLV P W ++ GG+L+ + VMR +
Sbjct: 242 LGVIRLNPVVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSVMRFKDSIE 301
Query: 206 QREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR-DDVP 263
Q+ +K A K Q+E V+ LD L T W++NKKV VV R W SG RL + D P
Sbjct: 302 QQIYLKEASKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKVPPAMYDGP 361
Query: 264 LPEEPDTDDEAQIXXXXXXXXXXXXENRER---YSQRCDIELKLAVARKMKDEEAFYYPH 320
P +P ++ A + N+ + +S RC + KL +AR ++E FY+PH
Sbjct: 362 EPVQPQVEELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEIARAFLNDE-FYFPH 420
Query: 321 NVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSL 380
N+DFRGRAYP+ HLNH+G D+CRG+L FA+ +PLG G +WLKIH+ANLY G DK +
Sbjct: 421 NLDFRGRAYPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANLY--GYDKANF 478
Query: 381 EGRVSFTESHVDDIFDSADKPLEG---RRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
+ RV++ + H+D I+ +A + L+ + WWL A DP+Q LA I L +AL S +PE F
Sbjct: 479 DDRVNWVDEHLDQIYQTATRLLDDPATKAWWLEASDPWQFLAASIELHDALESGNPEAFE 538
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
S +PVHQDG+CNGLQHYAALG D GA VNL A +KP+DVYS + A V + + D +
Sbjct: 539 SSLPVHQDGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVEEAIAKDCESG 598
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
+A L ++ RK+VKQTVMT+VYGVT+IGAREQI+++LK+R ++ + +
Sbjct: 599 DK------YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRKDIPEE-ECWS 651
Query: 558 ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA------------------------- 592
A+ Y A++ L + +F+GA+SI WL A+++A
Sbjct: 652 AAAYLARLVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPELMAEAAAAKKGQLPM 711
Query: 593 -----SENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAF 645
+ V WTTPLGLP+VQPYRK+ R I T++Q + + +V +Q +AF
Sbjct: 712 NRLKKEQMTSVIWTTPLGLPIVQPYRKIARKQIDTAIQTVYISDPNRLAEVNSAKQASAF 771
Query: 646 PPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPI 705
PPN++HSLD +HMM+TA+ C++ L FA VHDSYWTHA D+D+M+ +R F+ L+ + +
Sbjct: 772 PPNYIHSLDATHMMLTALECRKKNLTFASVHDSYWTHAADIDEMSSTIRDTFIALHSSDV 831
Query: 706 LENLLEGF 713
L L F
Sbjct: 832 LGQLRREF 839
>Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D05247g PE=3 SV=1
Length = 1263
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/671 (40%), Positives = 399/671 (59%), Gaps = 55/671 (8%)
Query: 75 AAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPA 129
A+R + ++N + W ++ K+GS L+ +L+ + + P + + V G PA
Sbjct: 492 TALRNMHVEENMIQ-WPSDVKAKIGSILISMLIHVSKVTVEGVDPITKEKVVGEA---PA 547
Query: 130 FVHSFRTVTKEAKKTGRKFGIIECDPLILKGL--DRSAKNMVIPYMPMLVPPVNWTGYDK 187
F H+F+ ++G K GI++ ++ L +R N+ ++PMLV P WT ++
Sbjct: 548 FCHTFQY------RSGTKIGILKIHRSLVNQLSAERMTTNIQPQHLPMLVRPRPWTNWNS 601
Query: 188 GGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRI 246
GG+ + S ++R+ +Q +K ++ ++ V+E L+ LG+T W +N+K+ ++V +
Sbjct: 602 GGYNYSQSTLIRSRDSPEQIAYIKAVSEQGSIDNVYEGLNVLGNTPWTINEKLFNIVSEV 661
Query: 247 WASGGRLADL---VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELK 303
W +G D+ +D + P P+ ++D + E + S RCD K
Sbjct: 662 WNTGEGFLDIPPVLDNFEFP-PQPARSEDPLILKEWRNKCRQMSNEFKGFKSYRCDSNYK 720
Query: 304 LAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWL 363
L +AR E+ FY+PHN+DFRGRAYP+ PH NHLG+D+ R +L F +G+ LG SG QWL
Sbjct: 721 LEIARAFLGEK-FYFPHNMDFRGRAYPLAPHFNHLGNDMTRSLLIFWNGKKLGTSGLQWL 779
Query: 364 KIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIT 423
KIHLANLY G+DK S E RV F ++H+ +I +SA+ PL+G RWW A+ P+Q LA CI
Sbjct: 780 KIHLANLY--GMDKCSFEERVEFADTHLKEIRESAEHPLDGTRWWTKADKPWQFLATCIE 837
Query: 424 LTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 483
L EAL+ +PE FISH PVHQDG+CNGLQHYAALG D GA VNLV ++P DVY+ +A
Sbjct: 838 LNEALKLDNPENFISHQPVHQDGTCNGLQHYAALGGDIEGARQVNLVPSDRPQDVYAFVA 897
Query: 484 ARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL 543
V + + A A L + + RK+VK+TVMT+VYGVT++GA +QI +
Sbjct: 898 KLVTKRLENSAAAGDE------QAAILKDLISRKVVKRTVMTNVYGVTFVGAADQI---M 948
Query: 544 KERDVFSDDTKLFGA-SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------N 595
KE D + D + S Y AK ++ E+F A I +WLGECAK I+ N
Sbjct: 949 KELDQYFDKPEESNELSRYLAKHVFASIRELFHAAHLIQDWLGECAKKISKSVRLDFDLN 1008
Query: 596 Q-----------PVRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQR 642
Q V WT+PLGLPVVQPYR L + ++T+LQ +T + + +RQ+
Sbjct: 1009 QSKTINSSDLMTSVIWTSPLGLPVVQPYRDLKKKQVQTNLQTVFITDPFAINPINPRRQQ 1068
Query: 643 TAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYE 702
PPNF+HSLD SHM+++A+ C +AGL FA VHDSYWTHA +VD+MNR+LR +F++L+E
Sbjct: 1069 AGLPPNFIHSLDASHMLLSAIQCGKAGLDFAAVHDSYWTHASEVDNMNRLLRQEFIKLHE 1128
Query: 703 TPILENLLEGF 713
++E L F
Sbjct: 1129 VDLIERLKNEF 1139
>H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_1488 PE=3 SV=1
Length = 1351
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 378/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V +R+ ++K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVTKKIRNCSRKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 377/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_3346 PE=4 SV=1
Length = 1351
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 377/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPO41 PE=3 SV=1
Length = 1351
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 377/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1F14_0430g PE=3 SV=1
Length = 1351
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 376/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 376/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_10289 PE=3 SV=1
Length = 1070
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/751 (38%), Positives = 403/751 (53%), Gaps = 115/751 (15%)
Query: 63 KKVIDLMKKQKIAAVRGIMKDQNDT-KPWGPVMRTKVGSRLVELLMQTAYI-------QP 114
K + + K K+ +++ MK+ D+ W ++ KVG+ +V+ + +T Y+
Sbjct: 298 KFYLQVSKNIKLESLKMRMKEYVDSVGGWDKRLQLKVGAAVVDCIQRTCYVPNEYGEVST 357
Query: 115 PSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIE-----CDPLILKGLDRSAKNMV 169
P G P PAF+H++ R+ G+I+ D ++ D +
Sbjct: 358 PELCAAKGLPPPEPAFIHNY------VFDRNRRAGVIQIHQRMADTVLATNPDANVLPWT 411
Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
Y+PMLVPP WT GG+L L + +MR Q + V+R +++ + +AL+ +
Sbjct: 412 ARYLPMLVPPRPWTSVINGGYLKLRTKIMRQRDSAWQMDCVQRG---EMDGILKALNLMA 468
Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
W +NK+VL VV +IW GG DL R DVPLP +PD+ + A
Sbjct: 469 EVPWVINKEVLDVVLQIWEDGGNFGDLPTRTDVPLP-DPDSPEFADDPALYHKNVRKNQA 527
Query: 290 NRERYSQRCDIEL----------------------------------------------- 302
+ S C +L
Sbjct: 528 HMMTISTSCGFKLIATVSGHCLEVVGWIFLSLEPSERLLRWSLIEQLNREFHSLRCDTLY 587
Query: 303 KLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQW 362
KL VA + KDE YYP+N+DFRGR YP+ P+LNHLGSD+ R +L F D +PLG+ G +W
Sbjct: 588 KLQVAEEFKDEPELYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGERGLRW 647
Query: 363 LKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPL-EGR-RWWLNAEDPFQCLAV 420
+KIHLAN++ GVDK S + RV F ++H+D + SA PL EG WW A+ PF L V
Sbjct: 648 MKIHLANVF--GVDKCSFDERVEFADAHLDKVVASASDPLGEGDCAWWKGADYPFLALGV 705
Query: 421 CITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 480
C L A+ S P ++S+IP+HQDGSCNGLQHYAALGRD G A VNLV ++P+DVY
Sbjct: 706 CFELKRAIESPDPTQYMSNIPIHQDGSCNGLQHYAALGRDHSGGAQVNLVPADRPSDVYM 765
Query: 481 GIAARVLDIMRSDAQKDP----------AIFPD---------ALHARTLVNQ-------- 513
G+A +V+ + DA + A PD RTL++Q
Sbjct: 766 GVATQVMAKVERDAALEVPTVEEVRAMLAAVPDDESTESLSRRTKFRTLLDQAHRKKYAQ 825
Query: 514 -----VDRKLVKQTVMTSVYGVTYIGAREQIKRRLKE----RDVFSDDT---KLFGASCY 561
+ RK+VKQTVMTSVYGVTYIGAR+QI RL E + DD ++ ASCY
Sbjct: 826 FLDGIITRKVVKQTVMTSVYGVTYIGARKQISARLHETFLTKGHIMDDKLEDNIYHASCY 885
Query: 562 AAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIK 621
A++T+ ++ ++F AR IM WL CA + QP+ W TPLGLPVVQPYR ++
Sbjct: 886 CAELTMGSMGDLFTSARGIMGWLARCAGKVGESGQPMSWITPLGLPVVQPYRSKSTKQVR 945
Query: 622 TSLQ-MLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC-KQAGLAFAGVHDSY 679
T +Q +L + E V + RQ++AFPPNFVHSLD +HMM+TA C + ++FA VHDSY
Sbjct: 946 TKVQHVLMVDNEGRPVSIGRQKSAFPPNFVHSLDSTHMMLTARRCLEDEQISFAAVHDSY 1005
Query: 680 WTHACDVDDMNRILRGKFVELYETPILENLL 710
WTHAC VD MNR LR +FV LYE P+LE+LL
Sbjct: 1006 WTHACSVDIMNRRLREEFVNLYEQPLLEDLL 1036
>B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_05511 PE=3 SV=1
Length = 1351
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/656 (40%), Positives = 376/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R ++GS L+ +L+Q A + P + V G PAF H ++
Sbjct: 592 WPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEA---PAFAHGYQY------HN 642
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ +++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 643 GSKLGVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 702
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ D
Sbjct: 703 SPEQVAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKGEGFLDIPGAQD 762
Query: 262 --VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
V P P D + + S RCD KL +AR E+ Y+P
Sbjct: 763 EMVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ RV+FTESH+ DI DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1000 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDFS 1051
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K +A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1052 KYLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1111
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1112 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1171
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA D+D MN +LR +F++L+E ++ L E F +
Sbjct: 1172 LSAAECGKQGLDFASVHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQ 1227
>E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_05010 PE=3 SV=1
Length = 1385
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/678 (39%), Positives = 372/678 (54%), Gaps = 74/678 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI--RPAFVHSFRTVTKEAKKTGRK 147
W + K+GS L +L + + G +PAF H ++ + G
Sbjct: 547 WSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPAFRHVYQL------EKGHS 600
Query: 148 FGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQ 206
G + ++ R A +++ ++PM+ PP WT Y GG L P+ +MR Q
Sbjct: 601 VGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQ 660
Query: 207 ---REAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-D 261
R+ V+ A + L+ +F L+ LG T WR+NK V V+ W SG LAD+ D +
Sbjct: 661 CLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPN 720
Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
+P P +P+TDD Q+ + +SQRC L+L +AR E FY PHN
Sbjct: 721 LPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQLEIARAYVGE-TFYLPHN 779
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
+DFRGRAYP+ P+ N +G D+CRG+L F+ GR LG+ G +WLKIH+AN+Y G DK S +
Sbjct: 780 MDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFD 837
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R F H+DD+ DSA+K L GRRWWL A DPFQCLA CI L AL P +ISH+P
Sbjct: 838 ERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLP 897
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
+HQDGSCNGLQHYAALG D +GA VNL ++P+D+YS +A V + +A +
Sbjct: 898 IHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAAGNQL- 956
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK-------ERDVFSDDTK 554
A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L ER+V
Sbjct: 957 -----AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGK--- 1008
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP----------------- 597
+ Y + AL MF GA I WLG+CA I P
Sbjct: 1009 ---CATYITRKIFAALSSMFTGAHEIQFWLGDCANRITQSLGPEQIEALEAARQVPISGT 1065
Query: 598 -------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKV 636
V WTTPL LPVVQPYR+ + T+LQ L+++ +D V
Sbjct: 1066 SKAKKKAIIDDLSKRFLSTVIWTTPLKLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVV 1125
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
++Q AFPPNF+HSLD +HMM++A+ C + GL+F+ VHDS+WTHA D+D MNR+LR
Sbjct: 1126 NRRKQLQAFPPNFIHSLDATHMMLSAIKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDA 1185
Query: 697 FVELYETPILENLLEGFQ 714
FV ++ I+ L F+
Sbjct: 1186 FVRMHSEDIVGRLASEFK 1203
>C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_059100 PE=3 SV=1
Length = 1385
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/678 (39%), Positives = 372/678 (54%), Gaps = 74/678 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI--RPAFVHSFRTVTKEAKKTGRK 147
W + K+GS L +L + + G +PAF H ++ + G
Sbjct: 547 WSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPAFRHVYQL------EKGHS 600
Query: 148 FGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQ 206
G + ++ R A +++ ++PM+ PP WT Y GG L P+ +MR Q
Sbjct: 601 VGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQ 660
Query: 207 ---REAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-D 261
R+ V+ A + L+ +F L+ LG T WR+NK V V+ W SG LAD+ D +
Sbjct: 661 CLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPN 720
Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
+P P +P+TDD Q+ + +SQRC L+L +AR E FY PHN
Sbjct: 721 LPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQLEIARAYVGE-TFYLPHN 779
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
+DFRGRAYP+ P+ N +G D+CRG+L F+ GR LG+ G +WLKIH+AN+Y G DK S +
Sbjct: 780 MDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFD 837
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R F H+DD+ DSA+K L GRRWWL A DPFQCLA CI L AL P +ISH+P
Sbjct: 838 ERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLP 897
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
+HQDGSCNGLQHYAALG D +GA VNL ++P+D+YS +A V + +A +
Sbjct: 898 IHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAAGNQL- 956
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK-------ERDVFSDDTK 554
A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L ER+V
Sbjct: 957 -----AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGK--- 1008
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP----------------- 597
+ Y + AL MF GA I WLG+CA I P
Sbjct: 1009 ---CATYITRKIFAALSSMFTGAHEIQFWLGDCANRITQSLGPEQIEALEAARQVPISGT 1065
Query: 598 -------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKV 636
V WTTPL LPVVQPYR+ + T+LQ L+++ +D V
Sbjct: 1066 SKAKKKAIIDDLSKRFLSTVIWTTPLKLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVV 1125
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
++Q AFPPNF+HSLD +HMM++A+ C + GL+F+ VHDS+WTHA D+D MNR+LR
Sbjct: 1126 NRRKQLQAFPPNFIHSLDATHMMLSAIKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDA 1185
Query: 697 FVELYETPILENLLEGFQ 714
FV ++ I+ L F+
Sbjct: 1186 FVRMHSEDIVGRLASEFK 1203
>J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_00271 PE=3 SV=1
Length = 1385
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/678 (39%), Positives = 372/678 (54%), Gaps = 74/678 (10%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI--RPAFVHSFRTVTKEAKKTGRK 147
W + K+GS L +L + + G +PAF H ++ + G
Sbjct: 547 WSAAVEAKIGSLLASMLFSSTKVVVKQQNTETGEITFVKQPAFRHVYQL------EKGHS 600
Query: 148 FGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQ 206
G + ++ R A +++ ++PM+ PP WT Y GG L P+ +MR Q
Sbjct: 601 VGFVHIHDSVVDRFRREPASSLLAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQ 660
Query: 207 ---REAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-D 261
R+ V+ A + L+ +F L+ LG T WR+NK V V+ W SG LAD+ D +
Sbjct: 661 CLQRQYVRAAASRGDLDEIFAGLNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPN 720
Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
+P P +P+TDD Q+ + +SQRC L+L +AR E FY PHN
Sbjct: 721 LPEPTKPETDDPVQLRAYYRSKTLVDNKRSGLHSQRCFQNLQLEIARAYVGE-TFYLPHN 779
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
+DFRGRAYP+ P+ N +G D+CRG+L F+ GR LG+ G +WLKIH+AN+Y G DK S +
Sbjct: 780 MDFRGRAYPLPPYFNQMGPDMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFD 837
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R F H+DD+ DSA+K L GRRWWL A DPFQCLA CI L AL P +ISH+P
Sbjct: 838 ERAQFAMDHLDDVIDSAEKGLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLP 897
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
+HQDGSCNGLQHYAALG D +GA VNL ++P+D+YS +A V + +A +
Sbjct: 898 IHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAAGNQL- 956
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK-------ERDVFSDDTK 554
A+ L ++V+RK+VKQTVMT+VYGVT++GA Q++++L ER+V
Sbjct: 957 -----AKILEDKVNRKIVKQTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGK--- 1008
Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP----------------- 597
+ Y + AL MF GA I WLG+CA I P
Sbjct: 1009 ---CATYITRKIFAALSSMFTGAHEIQFWLGDCANRITQSLGPEQIEALEAARHVPISGT 1065
Query: 598 -------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKV 636
V WTTPL LPVVQPYR+ + T+LQ L+++ +D V
Sbjct: 1066 SKAKKKAIIDDLSKRFLSTVIWTTPLKLPVVQPYREAKTRRVVTTLQTLSIKDPHSSDVV 1125
Query: 637 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGK 696
++Q AFPPNF+HSLD +HMM++A+ C + GL+F+ VHDS+WTHA D+D MNR+LR
Sbjct: 1126 NRRKQLQAFPPNFIHSLDATHMMLSAIKCDELGLSFSAVHDSFWTHAGDIDTMNRVLRDA 1185
Query: 697 FVELYETPILENLLEGFQ 714
FV ++ I+ L F+
Sbjct: 1186 FVRMHSEDIVGRLASEFK 1203
>Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ACR224C PE=3 SV=1
Length = 1295
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/658 (39%), Positives = 388/658 (58%), Gaps = 56/658 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ KVGS L+ +L+ A + P +++ V G PA H+F+ +
Sbjct: 539 WPHNIKAKVGSLLISMLIHVAKVNVKGVDPVTNKTVYGKA---PAICHTFQY------RM 589
Query: 145 GRKFGIIECDPLILKGL--DRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ + + DR + N ++PMLV P WT ++ GG+LF S ++R+
Sbjct: 590 GSKVGVLKLHRSLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKD 649
Query: 203 VKQQREAVKRAPKKQL-EPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV-DRD 260
+Q +K K + + V++ L+ LG T W VNK +L ++ ++W SG D+ +D
Sbjct: 650 SPEQSAYIKAVTGKGVVQNVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQD 709
Query: 261 DVPLPEEPDTDDEAQ-----IXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEA 315
++ LP +P +D ++ + E ++ S RCD KL +AR E+
Sbjct: 710 ELLLPAKPRGEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK- 768
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY+PHN+DFRGRAYP+ PH NHLG+D+ R +L F +G+ LGK G +WLKIH+ NLY G+
Sbjct: 769 FYFPHNMDFRGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GL 826
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK + E RV+FTE+H++DI DSA+ PL G+ WW A+ P+QCLA C+ + A + S+PE
Sbjct: 827 DKQTFEARVAFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPED 886
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
++SH PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + +
Sbjct: 887 YVSHQPVHQDGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERL----- 941
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+ A +A L N + RK+VK+TVMT+VYGVT+IGA QI + L+ D F D++
Sbjct: 942 -EKAALEGDQNAAQLKNLITRKVVKRTVMTNVYGVTFIGATNQIDKELQ--DAFPDNS-- 996
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ------------------P 597
+ + Y K ++ E+F A I +WLGE AK I+ +
Sbjct: 997 YDMARYLTKHVFNSIRELFHAAHLIQDWLGESAKKISKSIRLDLELEKIKKLDNSIMMTS 1056
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDG 655
V WT+PLGLPVVQPYR + + I T+LQ + + + + +RQ FPPNF+HSLD
Sbjct: 1057 VIWTSPLGLPVVQPYRDIKKKQIHTNLQTVFIADPFAVNPIDPRRQMAGFPPNFIHSLDA 1116
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
SHM+++A+ C + GL FA VHDSYWTHA DV MN+ LR +FV++++ +++ L F
Sbjct: 1117 SHMLLSAIECGRLGLQFAAVHDSYWTHASDVPKMNKALRNEFVKMHQVDLIQRLKNEF 1174
>M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FACR224C PE=4
SV=1
Length = 1295
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/658 (39%), Positives = 388/658 (58%), Gaps = 56/658 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ KVGS L+ +L+ A + P +++ V G PA H+F+ +
Sbjct: 539 WPHNIKAKVGSLLISMLIHVAKVNVKGVDPVTNKTVYGKA---PAICHTFQY------RM 589
Query: 145 GRKFGIIECDPLILKGL--DRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ + + DR + N ++PMLV P WT ++ GG+LF S ++R+
Sbjct: 590 GSKVGVLKLHRSLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKD 649
Query: 203 VKQQREAVKRAPKKQL-EPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV-DRD 260
+Q +K K + + V++ L+ LG T W VNK +L ++ ++W SG D+ +D
Sbjct: 650 SPEQSAYIKAVTGKGVVQNVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQD 709
Query: 261 DVPLPEEPDTDDEAQ-----IXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEA 315
++ LP +P +D ++ + E ++ S RCD KL +AR E+
Sbjct: 710 ELLLPAKPRGEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK- 768
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY+PHN+DFRGRAYP+ PH NHLG+D+ R +L F +G+ LGK G +WLKIH+ NLY G+
Sbjct: 769 FYFPHNMDFRGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GL 826
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK + E RV+FTE+H++DI DSA+ PL G+ WW A+ P+QCLA C+ + A + S+PE
Sbjct: 827 DKQTFEARVAFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPED 886
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
++SH PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + +
Sbjct: 887 YVSHQPVHQDGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERL----- 941
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
+ A +A L N + RK+VK+TVMT+VYGVT+IGA QI + L+ D F D++
Sbjct: 942 -EKAALEGDQNAAQLKNLITRKVVKRTVMTNVYGVTFIGATNQIDKELQ--DAFPDNS-- 996
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ------------------P 597
+ + Y K ++ E+F A I +WLGE AK I+ +
Sbjct: 997 YDMARYLTKHVFNSIRELFHAAHLIQDWLGESAKKISKSIRLDLELEKIKKLDNSIMMTS 1056
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDG 655
V WT+PLGLPVVQPYR + + I T+LQ + + + + +RQ FPPNF+HSLD
Sbjct: 1057 VIWTSPLGLPVVQPYRDIKKKQIHTNLQTVFIADPFAVNPIDPRRQMAGFPPNFIHSLDA 1116
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
SHM+++A+ C + GL FA VHDSYWTHA DV MN+ LR +FV++++ +++ L F
Sbjct: 1117 SHMLLSAIECGRLGLQFAAVHDSYWTHASDVPKMNKALRNEFVKMHQVDLIQRLKNEF 1174
>E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletotrichum graminicola
(strain M1.001 / M2 / FGSC 10212) GN=GLRG_07148 PE=3 SV=1
Length = 1395
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/683 (40%), Positives = 393/683 (57%), Gaps = 79/683 (11%)
Query: 89 PWGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKK 143
PW P ++ KVG+ L+ L++TA I+ P + ++ +PAF H + K
Sbjct: 539 PWPPAVKAKVGAALLSALIETAKIKVVKEHPETKTLIS---QFQPAFSHVSQL------K 589
Query: 144 TGRKFGIIECDPLILKGLDRSAK-NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
G+K G++ + ++ + R + + + ++PM+V P W +DKGG L + ++R
Sbjct: 590 RGKKIGMMLLNKELVNLMKREPQGDYLAKHLPMVVEPEPWQAFDKGGFLESRANLVRIKQ 649
Query: 202 GVKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD 260
G K Q+ + A + ++ VF+ LD LG T WRVN VL+V+ W +G LA+L +
Sbjct: 650 GGKDQKLYSEAAIARGDMDQVFKGLDVLGKTAWRVNTPVLNVMLEAWNTGEALANLPALN 709
Query: 261 -DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRER-YSQRCDIELKLAVARKMKDEEAFYY 318
D+P+P EP+ D+ R +S RC + +L +AR +++ FY+
Sbjct: 710 PDIPVPPEPEASDDPMAHRNWVRAVKAADNERGGLHSVRCFMNFQLEIARAFRNQ-TFYF 768
Query: 319 PHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKL 378
PHN+DFRGRAYP+ +LNH+G+D RGIL FA G+ LG+ G +WLK+HLAN++ G DK
Sbjct: 769 PHNIDFRGRAYPLPTYLNHMGADHVRGILRFARGKELGEDGLKWLKVHLANVF--GFDKA 826
Query: 379 SLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFIS 438
SL+ R SF ++ +IFDSA+KPL+G RWWL AEDP+QCLAVC L AL S P F+S
Sbjct: 827 SLKDRESFAMDNLVNIFDSANKPLDGNRWWLKAEDPWQCLAVCYELKAALESPEPTKFVS 886
Query: 439 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDP 498
H+P+HQDG+CNGLQHYAALG D GA VNL G+KPADVYS +A V + + DA+
Sbjct: 887 HLPIHQDGTCNGLQHYAALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDAEAGN 946
Query: 499 AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK-------ERDVFSD 551
A + ++ RK+VKQTVMT+VYGVT+ GA++Q+ ++L E FS
Sbjct: 947 AF------GLVMNGKITRKVVKQTVMTNVYGVTFAGAKKQVCKQLDALYPNLYEESGFSS 1000
Query: 552 DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECA------------------KVIAS 593
+ Y A + AL MF GA I +WLGE ++ S
Sbjct: 1001 ----IVLASYVATLVFKALSSMFGGAHDIQHWLGEIGGRVCRALSAEQLERISNDNLLPS 1056
Query: 594 ENQPVR--------------------WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--R 631
++ R WTTPL +P+ QPYRK G IIKTSLQ L+L
Sbjct: 1057 PSKTARAGDKKTTTDDLLAQFRATIVWTTPLRMPIAQPYRKSGTRIIKTSLQELSLTVPE 1116
Query: 632 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNR 691
+D V K+Q AFPPNF+HSLD +HM+++A+ C + GL FA VHDS+WTHA DV+ MNR
Sbjct: 1117 RSDPVHRKKQLQAFPPNFIHSLDATHMLLSALECHELGLDFAAVHDSFWTHAADVNVMNR 1176
Query: 692 ILRGKFVELYETPILENLLEGFQ 714
+LR FV ++E ++ L F+
Sbjct: 1177 VLRDAFVRIHEEDVIGRLSAEFE 1199
>D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarpus siliculosus
GN=Esi_0208_0042 PE=3 SV=1
Length = 1167
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 283/693 (40%), Positives = 395/693 (56%), Gaps = 82/693 (11%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIV------------------DGSPDIRPAFV 131
W + K+G+ L++LL++TA + V +G P + AFV
Sbjct: 459 WPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFV 518
Query: 132 HSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMVIP-YMPMLVPPVNWTGYDKGGH 190
H K RK + + K +D + P ++PMLVPP++W ++GG
Sbjct: 519 HDIIK-----GKNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWIKPNRGGF 573
Query: 191 LFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
L L + +MRT G Q+ A++RA +Q V++AL+ LG +WR+N VL V
Sbjct: 574 LRLRAQIMRTKGEAAQKHALRRADLRQ---VYKALNCLGKVRWRINGHVLDTVMVCLRDK 630
Query: 251 GRLADLVDRDDVPLPEEPD------------------TDDEA------QIXXXXXXXXXX 286
+ DL D+PLP PD D+E +
Sbjct: 631 IAVGDLPVIKDLPLPPRPDGVTVDRLGRLRAPVQGEHEDEEVFKERRQKHYAYKRLLEKT 690
Query: 287 XXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGI 346
+N +S RCD+++K+ +A++ +D Y+P+N+DFRGR YP+ P+LN LGSD RG+
Sbjct: 691 KQKNANMHSLRCDMKIKVDIAQEFRDH-VIYFPYNMDFRGRTYPIPPNLNILGSDFSRGV 749
Query: 347 LEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDD----IFDSADKPL 402
L F + +PLG+ G WLK+HLANLY G DK+S + RV+F E H+D+ + DSA +PL
Sbjct: 750 LVFDEAKPLGEKGLYWLKVHLANLY--GEDKVSFDDRVAFVEKHMDESWREVRDSALRPL 807
Query: 403 EGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKL 462
EG WW +A+ P+QCLAVC LT AL S P ++S +PVHQDGSCNGLQHYAALG D
Sbjct: 808 EGECWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDAN 867
Query: 463 GAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQ--------- 513
G A VNL +P DVYSG+ V + +A P P+ L N
Sbjct: 868 GGAQVNLSPSPEPQDVYSGVCDVVKKKVALEASTVP---PEGASVVDLANHEIAKMVDGL 924
Query: 514 VDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD----------TKLFGASCYAA 563
+DRK+VKQTVMTSVYGVT++GAR QI+ L ++ + D ++ AS Y A
Sbjct: 925 IDRKVVKQTVMTSVYGVTFVGARAQIQNVLGDKMIGHTDESGVPSAEVEENVYKASAYVA 984
Query: 564 KVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTS 623
K T+T LEE+F AR+ M+WL ++++A E+QP+ W TPLGLPV+QPYR+ + ++T
Sbjct: 985 KHTMTVLEELFTEARNTMDWLKAVSQLVAKEDQPMSWITPLGLPVLQPYRRTDTYQVQTL 1044
Query: 624 LQMLTLQRETDK--VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWT 681
LQ + ++ ++DK V VKRQ TAFPPNFVHSLD +HMMMTA+ + G+ FA VHDSYW
Sbjct: 1045 LQGVHIREDSDKLPVAVKRQTTAFPPNFVHSLDSTHMMMTAIEMDKVGVPFAAVHDSYWV 1104
Query: 682 HACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
HA +VD MN LR FV+LY PILE+L + +
Sbjct: 1105 HAGNVDVMNDKLRQCFVDLYSGPILEDLHDSLR 1137
>B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodactylum tricornutum
(strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 1188
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/694 (38%), Positives = 398/694 (57%), Gaps = 69/694 (9%)
Query: 68 LMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR 127
L+ + I R I+ +ND + W + ++G+ L ++L+ A ++ +DG +
Sbjct: 487 LVIEYAIRRARTIL--END-EAWTESQKIQLGAVLFQVLLNKANVR------IDGKQE-- 535
Query: 128 PAFVHSFRTVTKEAKKT-----GRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNW 182
AF + ++K+ ++ R ++ D L G + + PM+VPP W
Sbjct: 536 KAFTYEKFWISKQKVQSIVSMNDRLHKMLVSDKLQSFGTTTTRQK------PMIVPPKPW 589
Query: 183 TGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSV 242
+ D+GG+ L + ++R HG Q+E ++ L VF+ L+ LG WR+N++VL+V
Sbjct: 590 SRPDEGGYKMLRTELLRYHGCNMQKEVLQNV---DLSIVFDGLNALGRVPWRINQRVLTV 646
Query: 243 VDRIWASGGRLADLVDRDDVPLPEEP-DTDDEAQIXXXXXXXXXXXXENRERY------- 294
R W + L D+ +DD PLPEEP + Q E Y
Sbjct: 647 AQRCWDNNIPLGDIPSKDDNPLPEEPLHPKRQEQFWEPETPGYESYVEEYRLYRESWNKF 706
Query: 295 -----------SQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVC 343
S RC LKL A K K+ E ++P+N+DFRGRAYP+ PHL+++GSD+C
Sbjct: 707 RRVKQRNMDLRSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPHLSNVGSDLC 766
Query: 344 RGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLE 403
RG+L+FA+ +PLG G WLK+HLAN G DK+S + RV F + +++ + SA+ P
Sbjct: 767 RGVLKFAEAKPLGPRGLYWLKVHLANF--AGKDKMSFDDRVKFVDDNLEQVRLSAEDPFA 824
Query: 404 GRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLG 463
G RWW++ EDPFQ LA C+ + +A+ +PE+F+ +PVH DGSCNGLQHYAALGRD +G
Sbjct: 825 GERWWMSLEDPFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHYAALGRDSVG 884
Query: 464 AAAVNLVAGEKPADVYSGI-----------AARVLDIMRSD----AQKDPAIFPDALHAR 508
AVNL A ++P DVY G+ A R LD SD ++K A+
Sbjct: 885 GKAVNLCAYDEPQDVYVGVMHEVVRRVAAEAERQLDFDTSDLESLSRKQKKELSYNRAAK 944
Query: 509 TLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER------DVFSDDTKLFGASCYA 562
+ +DR +VK+TVMTSVYGVTYIGAR+QI+ ++ + DV ++F A Y
Sbjct: 945 LVNGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIISKLEAQGHDVDEMSNEIFQACGYV 1004
Query: 563 AKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKT 622
A +T+ + ++F GAR MNWL CA++I P+ W +P+GLP +QPYR+ I T
Sbjct: 1005 ASLTMEVMGDLFTGARETMNWLTTCARMITQHGFPLAWVSPIGLPAIQPYRQKKAATIVT 1064
Query: 623 SLQMLTLQRETDKVMVKRQR--TAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYW 680
LQ +TL E+D + + +QR +AFPPNF+HSLD SHM++TA+ + GL F+ VHDS+W
Sbjct: 1065 LLQTVTLINESDDLPIHKQRQVSAFPPNFIHSLDSSHMLLTALEMDRRGLTFSAVHDSFW 1124
Query: 681 THACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
THACD+D+MN LR FV+LY P+LE L + ++
Sbjct: 1125 THACDIDEMNEALRDVFVDLYSQPLLERLKQTWE 1158
>H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_6851 PE=3 SV=1
Length = 1357
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/656 (41%), Positives = 379/656 (57%), Gaps = 50/656 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTA--YIQ---PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W +R K+GS L+ +L+ A ++Q P + V G PAF H ++
Sbjct: 598 WPQNIRAKIGSVLISMLIHVAKVFVQGVDPITKAKVHGEA---PAFAHGYQY------HN 648
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ ++ L+ R ++ +PMLV P W + GG+ + S ++RT
Sbjct: 649 GSKLGVLKIHKTLIHQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKD 708
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVD-RD 260
+Q +K A ++ V++ L+ LG T W VN+KV VV ++W G D+ ++
Sbjct: 709 SPEQVAYLKAASDNGDIDRVYDGLNVLGDTPWTVNRKVFDVVSQVWNRGESFLDIPSAQE 768
Query: 261 DVPLPEEPDTDDEAQIXXXXXXXXXXXXEN-RERYSQRCDIELKLAVARKMKDEEAFYYP 319
++ LP P + + I S RCD KL +AR E+ Y+P
Sbjct: 769 EMVLPLAPPRNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKLEIARAFLGEK-LYFP 827
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG SG +WLKIHL+NL+ G DKL
Sbjct: 828 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLR 885
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
LE RV+FTESH++D+ DSA+ PL G RWW A+ P+Q LA C L E ++ +PE FISH
Sbjct: 886 LEDRVAFTESHLNDVKDSAENPLSGERWWTTADKPWQALATCFELNEVMKMDNPEEFISH 945
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
PVHQDG+CNGLQHYAALG D GA VNLV +KP DVY+ +A V + A+K
Sbjct: 946 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPNDKPQDVYAHVARLVQKRLEIAAEKGDE 1005
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGAS 559
+A+ L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +F D + S
Sbjct: 1006 ------NAKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--IFDDRKESLDYS 1057
Query: 560 CYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP-----VRWT 601
Y K A+ E+F A I +WLGE AK I+ N+P V WT
Sbjct: 1058 KYLTKHVFGAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWT 1117
Query: 602 TPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
TPLGLP+VQPYR+ + ++T+LQ + + + V +RQ+ PPNF+HSLD SHM+
Sbjct: 1118 TPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHML 1177
Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
++A C + GL FA VHDSYWTHA DVD MN +LR +F++L+E ++ L E F +
Sbjct: 1178 LSAAECGKQGLDFASVHDSYWTHASDVDTMNVVLREQFIKLHEIDLVLRLKEEFDQ 1233
>L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_02315 PE=3 SV=1
Length = 1438
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/720 (37%), Positives = 406/720 (56%), Gaps = 72/720 (10%)
Query: 49 GESATEIKEDEKLRKKVIDLMKK--QKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELL 106
G + ++++ R+++ D + K + +A + + DQ +T+ W ++ KVGS L+ L
Sbjct: 518 GLGLARVIKNKRTRQQLTDSLAKLVRGDSAAKHDLSDQWNTE-WSATIKAKVGSYLLSAL 576
Query: 107 MQTAYIQPPSDQIVDGS--PDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS 164
+ TA + + I+PAF H+ + K G+K G+I + ++ L R
Sbjct: 577 IDTAKVPVTMENTKTQELLTQIQPAFSHTHQY------KIGKKTGMILANRALVASLKRE 630
Query: 165 -AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGV-KQQREAVKRAPKK-QLEPV 221
+++ ++PM+ P W+ +++GG + P+ +R G K QR+ + A ++ +E +
Sbjct: 631 PVHSLLAKHLPMVAEPEPWSEFNQGGFISHPAKAVRIKGGDKNQRQYQEAAIRRGDMEQM 690
Query: 222 FEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD---DVPLPEEPDTDDEAQIXX 278
F+ LD LG T W +N+ V + W +G +A+ + + P PE P + D +
Sbjct: 691 FKGLDVLGKTSWVINRPVFDTMLEAWNTGEAIANFPAEEPKLEYP-PEPPASKDPTERRK 749
Query: 279 XXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHL 338
+S RC +L +AR ++ EE FY+PHN+DFRGRAYP+ P+LNH+
Sbjct: 750 WIRSLKTIENTRSGFHSARCFQNFQLEIARSLR-EEKFYFPHNLDFRGRAYPIPPYLNHM 808
Query: 339 GSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSA 398
G+D CRG+L+F GR LG++G +WL++HLAN++ G DK SL+ R +T H+DDI+DSA
Sbjct: 809 GADHCRGLLKFGKGRELGEAGLKWLRVHLANIH--GHDKASLKEREQYTVDHIDDIYDSA 866
Query: 399 DKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALG 458
PL GRRWWL+AEDP+QCLA C+ L AL S P F+SH+PVHQDG+CNGLQHYAALG
Sbjct: 867 MNPLNGRRWWLDAEDPWQCLAACLELKNALDSGDPTKFVSHLPVHQDGTCNGLQHYAALG 926
Query: 459 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKL 518
D+ GA VNL G++PADVY+ +A V + M D + A L ++ RK+
Sbjct: 927 GDEWGARQVNLEPGDRPADVYNAVAELVNEKMAVDRKNGNKC------AIWLEGKIKRKV 980
Query: 519 VKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASC---YAAKVTLTALEEMFQ 575
VKQTVMT+VYGVTYIGA+ Q++++L + F S Y A AL MF+
Sbjct: 981 VKQTVMTNVYGVTYIGAQAQVRKQLVAAHTDLPNEGSFNVSLLSGYVATKIFEALGTMFR 1040
Query: 576 GARSIMNWLGECAKVIASENQP-------------------------------------- 597
GA I WLGECA I++ P
Sbjct: 1041 GAHDIQFWLGECASRISTSVTPQQLDRLEHLHEEALDQRVPRLNRYHISMVDAEQQLQFK 1100
Query: 598 --VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSL 653
V WTTPL +P+VQPYR ++T+LQ +T+ +D V ++Q FPPNFVHSL
Sbjct: 1101 SSVIWTTPLRMPIVQPYRATKSRTVQTNLQQITISEPHRSDPVSKRKQLQGFPPNFVHSL 1160
Query: 654 DGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
D +HMM++A+ C +AGL+FA VHDS+WTHA D+D MN +LR F++++ ++ L F
Sbjct: 1161 DATHMMLSALKCDEAGLSFAAVHDSFWTHAADIDTMNGVLRDAFIQMHSDNVIARLAVEF 1220
>G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_003940 PE=3 SV=1
Length = 1317
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/674 (40%), Positives = 392/674 (58%), Gaps = 63/674 (9%)
Query: 82 KDQNDTKP-----WGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFV 131
KD N P W + KVGS L LL+ A + P + + V G ++PAF
Sbjct: 546 KDYNKEDPIANNEWDYPIYAKVGSVLASLLIHVAKVPVKGTDPTTGKTVRG---MQPAFH 602
Query: 132 HSFRTVTKEAKKTGRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGYDKGG 189
H+++ G+K G+++ +++ L N V P +PMLVPP W Y+ GG
Sbjct: 603 HTYQFFQ------GQKLGVLKVHKSLVRQLAGNELGNSVQPQLLPMLVPPRPWRSYNDGG 656
Query: 190 HLFLPSYVMRTHGVKQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWA 248
+LF + ++R + ++ A L+P+++ L+ LG+T W VN+KV V+ ++W
Sbjct: 657 YLFSQNNIVRIKDSAETTAYLRAASDMNNLDPIYDGLNVLGNTAWTVNRKVFDVISKVWN 716
Query: 249 SGGRLADL---VDRDDVP--LPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELK 303
+G D+ ++ D+P LP + ++A R SQRCD K
Sbjct: 717 TGEEYLDIPPIIEEPDLPSPLPLNAEPSEKADYQRRVRKAVNDAASAR---SQRCDTNYK 773
Query: 304 LAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWL 363
L +AR E+ F+ PHNVDFRGRAYP+ PH NHLG+D+ R + F DG+ LG+ G +WL
Sbjct: 774 LEIARGFIGEKLFF-PHNVDFRGRAYPISPHFNHLGNDMTRSLFLFWDGKKLGEQGLRWL 832
Query: 364 KIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIT 423
KIHLAN+Y GVDK L+ RV F E ++D+IFDSA PL+GR+WW + P+Q L+VC
Sbjct: 833 KIHLANVY--GVDKAPLDERVKFVEDNLDNIFDSAKNPLDGRKWWEKGDKPWQVLSVCFE 890
Query: 424 LTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 483
L+EA + P ++SHIPVHQDG+CNGLQHYAALG D GA VNL+ E+P DVY +A
Sbjct: 891 LSEAYKLDDPTEYVSHIPVHQDGTCNGLQHYAALGGDIEGARQVNLIPAERPQDVYKFVA 950
Query: 484 ARVLDIMRSDAQKDP--AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKR 541
V + ++A+K AIF L +++ RK+VKQTVMT+VYGVT++GA QI++
Sbjct: 951 GLVQKRVDAEAEKGNKYAIF--------LRDKITRKVVKQTVMTNVYGVTFVGAVLQIQK 1002
Query: 542 RLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIA--------- 592
++ D K+ S Y ++ E+F GA I +WLGE A+ I+
Sbjct: 1003 QIDHHFGKDDSDKVEEYSRYLTNHVFDSMRELFLGAHLIQDWLGESARRISKSVRIDYEE 1062
Query: 593 ----SENQP-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRE--TDKVMVKRQ 641
+ N+P V WTTPLGLP VQPYR + II T+LQ + + +V ++Q
Sbjct: 1063 KASVNSNKPRHLSSVIWTTPLGLPCVQPYRVTKKQIISTNLQDIVISDPFGASQVDARKQ 1122
Query: 642 RTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELY 701
+ AFPPNFVHSLD +HM+MTA AC + GL+FA VHDSYWTHA +V MN +R +FV+L+
Sbjct: 1123 QAAFPPNFVHSLDATHMLMTAAACGKDGLSFASVHDSYWTHAANVPKMNAHIRDQFVKLH 1182
Query: 702 ETPILENLLEGFQK 715
E ++ + + F+K
Sbjct: 1183 EENLIIKIRDEFEK 1196
>C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinocarpus reesii
(strain UAMH 1704) GN=UREG_00348 PE=3 SV=1
Length = 1231
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/666 (39%), Positives = 376/666 (56%), Gaps = 65/666 (9%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYI----QPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTG 145
W K+G+ L +L + + + P + V S +PAF H ++ + G
Sbjct: 397 WSAATEAKIGALLASMLFSSTKVPVEHKNPETREVTVSK--QPAFRHVYQL------EKG 448
Query: 146 RKFGIIECDPLILKGLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVK 204
G ++ I++ L R A +++ ++PM+ PP W+ Y GG L PS V+R
Sbjct: 449 FSIGYVQLHDSIVEKLGREPASHLLAKHLPMVSPPAPWSSYHHGGFLEQPSLVIRARPDN 508
Query: 205 Q-QREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL-VDRDD 261
Q + VK A ++ L+ +F L+ LG T W++N+ V V+ W SG LAD+ +
Sbjct: 509 ALQLQYVKAASRRGDLDEIFAGLNVLGKTGWQINRPVFDVMLEAWNSGKELADIPAAEPN 568
Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
+P PE+PDT D + + +SQRC L+L VAR E FY PHN
Sbjct: 569 LPEPEKPDTGDSGSLKAYYRAKAVVDNKRSGFHSQRCFQNLQLEVARAYIGE-TFYLPHN 627
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
+DFRGRAYP+ P+ N +GSD+CRG+L F++GR LG+ G +WLKIHLAN+Y G DK S +
Sbjct: 628 MDFRGRAYPLPPYFNQMGSDMCRGLLLFSEGRQLGERGLKWLKIHLANVY--GFDKASFD 685
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R F+ H+DD+ DSA+K L GRRWWL A DPFQCLA CI L AL + P F+SH+P
Sbjct: 686 ERAQFSMDHLDDVIDSAEKGLHGRRWWLQAADPFQCLAACIELKNALACADPTKFVSHLP 745
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
+HQDGSCNGLQHYAALG D +GA VNL ++P+D+YS +A V + DA +
Sbjct: 746 IHQDGSCNGLQHYAALGGDIIGARQVNLEPSDRPSDIYSAVAEHVHQSIVQDAASGSQL- 804
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSD---DTKLFGA 558
L ++++RK+VKQTVMT+VYGVT++GA Q++++L E ++ D + +
Sbjct: 805 -----GELLKDKINRKVVKQTVMTNVYGVTFLGAIRQVQKQLDE--IYPDLAENNNVNKI 857
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP--------------------- 597
+ Y + AL MF GA I WLG+CA I P
Sbjct: 858 ATYITRKIFAALSSMFTGAHEIQFWLGDCANRITQSLSPDQIEAVIEARNAPATAAKKPK 917
Query: 598 ------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRT 643
V WTTPL LPVVQPYR+ + T++Q L+++ D V ++Q
Sbjct: 918 KKDDLSKRFRSTVIWTTPLKLPVVQPYREAKVRRVTTAIQSLSIKEPHSDDIVSRRKQLQ 977
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNF+HSLD +HMM++A+ C + GL+F+ VHDS+WTHA DVD MN +LR FV ++
Sbjct: 978 AFPPNFIHSLDATHMMLSAIKCDELGLSFSAVHDSFWTHAGDVDTMNLVLRDAFVRMHSE 1037
Query: 704 PILENL 709
I+ L
Sbjct: 1038 DIVGRL 1043
>A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RPO41 PE=3 SV=2
Length = 1251
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/666 (40%), Positives = 392/666 (58%), Gaps = 49/666 (7%)
Query: 79 GIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDGSPDIRPAFVHS 133
I+++ +D+ W + K+G+ L LL+ A + P + + + GS +PAF H+
Sbjct: 488 NIIENPDDSTDWSYTVYAKLGAVLTNLLLFVAKVPVKAHNPTTGKTITGS---QPAFFHT 544
Query: 134 FRTVTKEAKKTGRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGYDKGGHL 191
++ + G+K G+I+ I+K L RS N V P +PMLV P W Y+ GG+L
Sbjct: 545 YQFLN------GQKLGVIKLHKEIIKQLAGRSLSNAVQPQLLPMLVAPREWHSYNDGGYL 598
Query: 192 FLPSYVMRTHGVKQQREAVKRAPK-KQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASG 250
+ S ++R + +++A L V++ L+ LG T W VN++V ++ R W SG
Sbjct: 599 YSRSTLVRIKDSAETTAYLRKAADLGNLNEVYDGLNVLGKTPWTVNRRVFEIITRYWNSG 658
Query: 251 GRLADLVDRDDVP-LPEEPDTDDE-AQIXXXXXXXXXXXXENRERYSQRCDIELKLAVAR 308
D+ + P LPE D E AQ E SQRCD KL +AR
Sbjct: 659 EEFLDIPPIMEEPNLPEPLPVDAEPAQKFEYQRKLRSALNEAASLRSQRCDTNYKLEIAR 718
Query: 309 KMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLA 368
E+ F+ PHNVDFRGRAYP+ PH NHLG+D+ R + F +GR LG+ G +WLKIHLA
Sbjct: 719 GFLGEKVFF-PHNVDFRGRAYPISPHFNHLGNDLTRSLFLFWEGRELGERGLEWLKIHLA 777
Query: 369 NLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEAL 428
N+Y GVDK L RV F +++++F+SA P + WW AE P+Q L VC L EA
Sbjct: 778 NVY--GVDKAPLNERVQFVNDNLENVFESARNPYDTDAWWKKAEKPWQALGVCFELEEAY 835
Query: 429 RSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLD 488
+ +P ++SHIP+HQDG+CNGLQHYAALG D GA VNL+ ++P DVY +A+ V
Sbjct: 836 KLENPTQYVSHIPIHQDGTCNGLQHYAALGGDIEGARQVNLLPADRPQDVYKYVASLVQK 895
Query: 489 IMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDV 548
+ ++A++ +A L +++ RK+VKQTVMT+VYGVT++GA QIK+++ +
Sbjct: 896 RIDAEAEEGNK------YAVFLQDKITRKVVKQTVMTNVYGVTFVGATAQIKKQIDQ--Y 947
Query: 549 FSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVI------------ASENQ 596
FS + + + Y ++ E+F+GA I +WLG+ AK + +++ +
Sbjct: 948 FSGEEDVADYARYLTMHVFNSIRELFEGAHLIQDWLGDAAKRVSKSVRIDYEDAKSNDGK 1007
Query: 597 P-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNF 649
P V WTTPLGLP VQPYR +IKT+LQ +++ +V ++Q+ AFPPNF
Sbjct: 1008 PNHLSSVIWTTPLGLPCVQPYRISKNQLIKTNLQDISISDPFSASQVDARKQQAAFPPNF 1067
Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHSLD +HM+MTA AC A L+FA VHDSYWTHA DVD MN+ +R +FV+L+ + +++ L
Sbjct: 1068 VHSLDATHMLMTAKACGDARLSFASVHDSYWTHAADVDHMNKEIRNQFVKLHSSNLVQEL 1127
Query: 710 LEGFQK 715
E F+K
Sbjct: 1128 KEEFEK 1133
>F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430
/ Wegner 21-1) GN=PP7435_Chr1-0797 PE=3 SV=1
Length = 1329
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/660 (41%), Positives = 380/660 (57%), Gaps = 54/660 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ K+GS L+ LL+Q+A I P +++ V G PA H ++
Sbjct: 570 WPNEIKAKIGSVLISLLLQSAKIDVQGKDPITNEEVHGQV---PAIFHQYQYAN------ 620
Query: 145 GRKFGIIECDPLILKGLDR-SAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K GI++ L + + V P Y+PMLV P W ++ GG+ + + ++RT
Sbjct: 621 GNKIGILKFHHDFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKD 680
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q VK A + ++ V++ L LG+T W +N ++ +V+ +W SG + D+ D
Sbjct: 681 SPEQLAYVKAASENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQD 740
Query: 262 VPL--PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
P+ P+ P D + I + S RCD KL AR E Y+P
Sbjct: 741 SPIYPPQPPSDADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGER-IYFP 799
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PHLNHLG+D+ RG+L F +G+ LG+ G +WLKIHLANLY G+DK +
Sbjct: 800 HNLDFRGRAYPISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKET 857
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ R FT+ + +I DSA KPL G+ WW ++E P+Q L+VCI L EA + +P F+SH
Sbjct: 858 LDKREQFTDLNKANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSH 917
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
IPVHQDG+CNGLQHYAALG D GA VNL+ KP DVYS +A V + DA
Sbjct: 918 IPVHQDGTCNGLQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDATNGHQ 977
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDT-KLFGA 558
+ A L + RK+VKQTVMTSVYGVTYIGA +QI RRLKE +F DD A
Sbjct: 978 L------ALKLQRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKE--IFGDDDPDTHVA 1029
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ---------------------P 597
Y A +++ E+F GA I +WL E +K I +
Sbjct: 1030 GRYLALQVFSSIRELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLAS 1089
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDG 655
V WT+PLGLP+VQPYR +G+ + T+LQ + + V ++Q AFPPN++HSLD
Sbjct: 1090 VIWTSPLGLPIVQPYRSIGKKQVATNLQTVFISDPHAVSPVDSRKQTNAFPPNYIHSLDA 1149
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SHM+++++ C Q L+FA VHDSYWTHA DVD MN ILR FV+L+ET ++++L + F +
Sbjct: 1150 SHMLLSSIECGQRRLSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFDR 1209
>R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna polymerase
protein OS=Neofusicoccum parvum UCRNP2 GN=UCRNP2_6354
PE=4 SV=1
Length = 1046
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 279/683 (40%), Positives = 383/683 (56%), Gaps = 77/683 (11%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDI---RPAFVHSFRTVTKEAKKTGR 146
W P+++ KVG+ + +++ A I P + + + + PAF H+ TV GR
Sbjct: 166 WAPMIKAKVGALCLSKILEAAKI-PVTREERETRKQLTANEPAFYHA--TVYS----AGR 218
Query: 147 KFGIIECDPLILKGLDRSA-KNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMR--THGV 203
K G+I ++L L R + PM+V P+ WTGY +GG+L P V++ ++
Sbjct: 219 KSGMIRLHQIVLDKLRREPLRGSFGTKYPMVVEPLPWTGYKEGGYLRYPEPVIKEKSNDD 278
Query: 204 KQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DV 262
Q+ A+ K ++ V L LG T W++N+ V VV W +G + L + +
Sbjct: 279 SQKIYAMAAIEKGDMDQVLAGLSVLGKTAWKINRDVFKVVIEAWNTGEPIGKLAPENPKM 338
Query: 263 PLPEEPDTDDEAQIXXXXXXXXXXXXENRERY-SQRCDIELKLAVARKMKDEEAFYYPHN 321
P EP + + + Y SQRC +L VAR +DE AFY+PHN
Sbjct: 339 EYPPEPSPEAPKKEYALWLKEKKRIDNAKGGYHSQRCFQNFQLEVARAFRDE-AFYFPHN 397
Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
+DFRGRAYP+ P LNHLG+D+ RG+L FA G+PLG G WLKIHLAN++ G DK SL
Sbjct: 398 MDFRGRAYPIPPLLNHLGADLSRGLLTFAKGKPLGSVGLTWLKIHLANVF--GYDKASLT 455
Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
R +F H++DI+DS PL GR+WWL AEDP+QCLA C L A S P ++ISH+P
Sbjct: 456 DREAFAMEHINDIYDSCQNPLTGRKWWLKAEDPWQCLATCFELKNAFDSPDPSSYISHLP 515
Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
VHQDG+CNGLQHYAALG DK GAA VNL G++P+D+YS +A V + SDA+ A
Sbjct: 516 VHQDGTCNGLQHYAALGGDKAGAAQVNLEPGDRPSDIYSAVADIVKKEVASDAKAGGAF- 574
Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTK---LFGA 558
A+ L ++ RK+VKQTVMT+VYGVT+IGAR Q+ ++L+ V S++ + L G
Sbjct: 575 -----AKILDGRITRKVVKQTVMTNVYGVTFIGARAQVIKQLEA--VLSEEEQKAGLLGM 627
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP--------------------- 597
Y AK+ AL +MF GA+ I +WLG CA I + P
Sbjct: 628 GAYVAKLIFKALGQMFNGAQEIQDWLGVCANRITTSLTPEQIDMIEKQSTTGTASEMPRD 687
Query: 598 -------------------------VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTL--Q 630
V WTTPL +PVVQPYRK I T LQ L++
Sbjct: 688 PRYRKNRGKKKAVSGKDIHSQFRTTVIWTTPLRMPVVQPYRKSLSREITTVLQYLSIVQP 747
Query: 631 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMN 690
+ TD ++Q AFPPNF+HSLD +HM+++A+ C + GL+FA VHDS+WTHA D+ MN
Sbjct: 748 KATDATDKRKQLQAFPPNFIHSLDATHMLLSALKCDELGLSFASVHDSFWTHAADIPLMN 807
Query: 691 RILRGKFVELYETPILENLLEGF 713
RILR FV ++ I+ L E F
Sbjct: 808 RILRDAFVRMHSEDIIGRLHEEF 830
>C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr1-4_0022 PE=3 SV=1
Length = 1321
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/660 (41%), Positives = 380/660 (57%), Gaps = 54/660 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W ++ K+GS L+ LL+Q+A I P +++ V G PA H ++
Sbjct: 562 WPNEIKAKIGSVLISLLLQSAKIDVQGKDPITNEEVHGQV---PAIFHQYQYAN------ 612
Query: 145 GRKFGIIECDPLILKGLDR-SAKNMVIP-YMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K GI++ L + + V P Y+PMLV P W ++ GG+ + + ++RT
Sbjct: 613 GNKIGILKFHHDFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKD 672
Query: 203 VKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
+Q VK A + ++ V++ L LG+T W +N ++ +V+ +W SG + D+ D
Sbjct: 673 SPEQLAYVKAASENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQD 732
Query: 262 VPL--PEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYP 319
P+ P+ P D + I + S RCD KL AR E Y+P
Sbjct: 733 SPIYPPQPPSDADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGER-IYFP 791
Query: 320 HNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLS 379
HN+DFRGRAYP+ PHLNHLG+D+ RG+L F +G+ LG+ G +WLKIHLANLY G+DK +
Sbjct: 792 HNLDFRGRAYPISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKET 849
Query: 380 LEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISH 439
L+ R FT+ + +I DSA KPL G+ WW ++E P+Q L+VCI L EA + +P F+SH
Sbjct: 850 LDKREQFTDLNKANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSH 909
Query: 440 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPA 499
IPVHQDG+CNGLQHYAALG D GA VNL+ KP DVYS +A V + DA
Sbjct: 910 IPVHQDGTCNGLQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDATNGHQ 969
Query: 500 IFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDT-KLFGA 558
+ A L + RK+VKQTVMTSVYGVTYIGA +QI RRLKE +F DD A
Sbjct: 970 L------ALKLQRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKE--IFGDDDPDTHVA 1021
Query: 559 SCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQ---------------------P 597
Y A +++ E+F GA I +WL E +K I +
Sbjct: 1022 GRYLALQVFSSIRELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLAS 1081
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDG 655
V WT+PLGLP+VQPYR +G+ + T+LQ + + V ++Q AFPPN++HSLD
Sbjct: 1082 VIWTSPLGLPIVQPYRSIGKKQVATNLQTVFISDPHAVSPVDSRKQTNAFPPNYIHSLDA 1141
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SHM+++++ C Q L+FA VHDSYWTHA DVD MN ILR FV+L+ET ++++L + F +
Sbjct: 1142 SHMLLSSIECGQRRLSFAAVHDSYWTHAADVDIMNEILRDAFVKLHETDLVQDLKDEFDR 1201
>H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletotrichum
higginsianum (strain IMI 349063) GN=CH063_04795 PE=3 SV=1
Length = 1400
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 275/682 (40%), Positives = 393/682 (57%), Gaps = 75/682 (10%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAK 142
KPW +R KVG+ L+ L++TA I+ P + +V +PAF H R
Sbjct: 542 KPWPVAVRAKVGAALLSALIETAKIKVVKEHPETKALVS---QYQPAFSHVSRL------ 592
Query: 143 KTGRKFGIIECDPLILKGLDRSAK-NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT- 200
K G+K G+I + ++ + R + + + ++PM+V P W +DKGG L + ++R
Sbjct: 593 KKGKKTGMILLNKELVNIMKREPQGDYLAKHLPMVVEPEPWQAFDKGGFLESRANLVRIK 652
Query: 201 HGVKQQREAVKRA-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDR 259
G K Q+ + A + ++ VF+ LD LG T WRVN VL+V+ W +G LA+L
Sbjct: 653 QGDKDQKLYSEAAIARGDMDQVFKGLDVLGKTPWRVNTPVLNVMLAAWNTGEALANLPAL 712
Query: 260 D-DVPLPEEPD-TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFY 317
+ ++P+P EP+ T+D E +S RC + +L +AR +++ FY
Sbjct: 713 NPNIPIPREPEATNDPLAHRAWVRAVRAAENERGGMHSVRCFMNFQLEIARAFRNQ-TFY 771
Query: 318 YPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDK 377
+PHN+DFRGRAYP+ +LNH+G+D RG+L FA+G+ LG+ G +WLK+H+AN++ G DK
Sbjct: 772 FPHNIDFRGRAYPLPTYLNHMGADHVRGLLRFANGKELGEEGLKWLKVHVANVF--GFDK 829
Query: 378 LSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFI 437
SL+ R SF ++ +IFDSA+ PL+G RWWL AEDP+QCLA C L AL S P F+
Sbjct: 830 ASLKERESFAMDNLVNIFDSANNPLDGTRWWLKAEDPWQCLATCFELKAALESPEPTKFV 889
Query: 438 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKD 497
SH+PVHQDG+CNGLQHYAALG D GA VNL G+KPADVYS +A V + + DA+
Sbjct: 890 SHLPVHQDGTCNGLQHYAALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDAESG 949
Query: 498 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFG 557
I A L +++ RK+VKQTVMT+VYGVT+ GA++Q+ ++L ++ D K G
Sbjct: 950 NVI------AVALRDKITRKVVKQTVMTNVYGVTFAGAKKQVCKQLD--SLYPDLPKESG 1001
Query: 558 -----ASCYAAKVTLTALEEMFQGARSIMNWLGECAK----------------------- 589
S Y A + AL MF+GA I WLG
Sbjct: 1002 FDNIITSSYVATLVFKALSSMFRGAHDIQYWLGXIGXRVCRALSAEQLERIKNDNILPSS 1061
Query: 590 ---------------VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTL--QRE 632
++A + WTTPL +P+ QPYRK G IKTSLQ L+L
Sbjct: 1062 SATAKAGDRKTTTDDILAQFRATIVWTTPLRMPISQPYRKSGTRCIKTSLQDLSLIIPER 1121
Query: 633 TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRI 692
+D V ++Q AFPPNF+HSLD +HM+++A+ C + GL FA VHDS+WTHA DV+ MNR+
Sbjct: 1122 SDPVHRRKQLQAFPPNFIHSLDATHMLLSALECHELGLDFAAVHDSFWTHASDVNTMNRV 1181
Query: 693 LRGKFVELYETPILENLLEGFQ 714
LR F+ ++E ++ L F+
Sbjct: 1182 LRDAFIRIHEEDVVGRLAAEFE 1203
>L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) OS=Pneumocystis
jiroveci (strain SE8) GN=PNEJI1_003333 PE=3 SV=1
Length = 1054
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/607 (43%), Positives = 363/607 (59%), Gaps = 55/607 (9%)
Query: 128 PAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGL-DRSAKNMVIP-YMPMLVPPVNWTGY 185
PAF H+++ + GRK G+I+ + ++K L + + + P +PMLV P W +
Sbjct: 374 PAFYHTYQY------QKGRKLGVIKLNDQVMKQLGSQPLRGNIHPRLLPMLVEPKPWISW 427
Query: 186 DKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQ-LEPVFEALDTLGHTKWRVNKKVLSVVD 244
D GG+ S VMR+ +Q + +K A ++ L+ +FE LD LG T W +N V +VV
Sbjct: 428 DSGGYYLSKSTVMRSRDSIEQIQYLKIASERNNLKSIFEGLDVLGSTAWAINIPVFNVVI 487
Query: 245 RIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELK 303
+W SG A + + ++ P P + D A + + + S RCDI K
Sbjct: 488 EVWNSGLEFAGIPPAESNIAFPPRPTSKDPADKISWQIQCRQIARDAQNKQSIRCDINYK 547
Query: 304 LAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWL 363
L +AR E+ Y+PHN+DFRGRAYP+ PH NHLG+D+CRG+L F + + +G+SG +WL
Sbjct: 548 LEIARAFLHEK-MYFPHNLDFRGRAYPIPPHFNHLGNDLCRGLLTFHEAKEIGESGLRWL 606
Query: 364 KIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIT 423
KIHLAN+ G DK S R +FT ++ +IFDSAD PL+G WWL +DP+Q LA C
Sbjct: 607 KIHLANI--CGFDKESFLEREAFTVENLKNIFDSADNPLKGSGWWLKFDDPWQTLAACFE 664
Query: 424 LTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 483
LT ALR P F S +P+HQDG+CNGLQHYAALG D LGA VNL +P DVY+ +A
Sbjct: 665 LTAALRFPDPHKFKSRLPIHQDGTCNGLQHYAALGGDILGARQVNLEPSNRPYDVYTRVA 724
Query: 484 ARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRL 543
V + ++ DA++ + A L +++ RK+VKQTVMT+VYGVTY+GAR QI +L
Sbjct: 725 ELVNEQVQKDAKEGNHL------AVLLKDKIARKIVKQTVMTNVYGVTYVGARNQILNQL 778
Query: 544 KERDVFSDDTKLFGASCYAAKVTLTAL--EEMFQGARSIMNWLGECAKVIA--------- 592
K L +L E +F A I WL E AK I+
Sbjct: 779 K---------------------NLNSLPREMLFVRAHKIQEWLNEAAKRISKSIDTSSYN 817
Query: 593 --SENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPN 648
+ V WT+PL LP+VQPYRK R IKT+LQ +T + V ++Q+TAFPPN
Sbjct: 818 GLNHMTSVIWTSPLNLPIVQPYRKSSRKQIKTNLQSIFITDPNDVSPVDTRKQQTAFPPN 877
Query: 649 FVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILEN 708
F+HSLD +HM+M+A++CK AGL FA VHDSYWTHA DVD+MN ILR FV+L+E I+EN
Sbjct: 878 FIHSLDATHMLMSAISCKNAGLTFASVHDSYWTHAADVDNMNVILRETFVKLHEENIMEN 937
Query: 709 LLEGFQK 715
LL F++
Sbjct: 938 LLNEFRE 944
>G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticillium dahliae
(strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)
GN=VDAG_07960 PE=3 SV=1
Length = 1409
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 282/732 (38%), Positives = 412/732 (56%), Gaps = 89/732 (12%)
Query: 53 TEIKEDEKLRKKVIDLMKKQ-KIAAVRGIMKDQNDTKP------------WGPVMRTKVG 99
++ K ++ R++V+ + K K+ AVR + + + KP W ++ KV
Sbjct: 493 SKTKTNKSKRRRVVQVASKSSKLDAVRAELGAEGEVKPLAKDTEPRADTPWPVAVKAKVA 552
Query: 100 SRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECD 154
+ L+ L+ TA I+ P + ++ +PAF H+ + + G+K G++ +
Sbjct: 553 AALLSALIDTAKIKVVKEHPETKTLIS---QYQPAFSHATQL------RRGKKIGMVLLN 603
Query: 155 PLILKGLDRSAK-NMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRT-HGVKQQREAVKR 212
++ + R + + + ++PM+V P W+ +DKGG L S ++R HG K QR +
Sbjct: 604 KELVNIMKREPQGDFLAKHLPMVVKPEPWSKFDKGGFLESTSNLVRVKHGDKDQRIYTEA 663
Query: 213 A-PKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPD- 269
A + ++ +F+ LD LG T WR+N +L V+ W SG LA++ + DV +P EP
Sbjct: 664 AIARGDMDQIFKGLDVLGQTAWRINAPILEVMLAAWNSGTALANIPALNPDVHVPTEPAA 723
Query: 270 TDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAY 329
++D + E +S RC + +L +AR +++ FY+PHN+DFRGRAY
Sbjct: 724 SEDPTERRLWLRAVKAAENERGGLHSVRCFMNFQLEIARAFRNQ-TFYFPHNIDFRGRAY 782
Query: 330 PMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTES 389
P+ +LNH+G+D RG+L FADG+ LG+ G +WLK+HLAN+Y G DK SL R SF
Sbjct: 783 PLPTYLNHMGADHVRGLLRFADGKELGEKGLKWLKVHLANVY--GFDKASLRDRESFAMD 840
Query: 390 HVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCN 449
++ +IFDSA KP+EG RWWL AEDP+QCLA C L AL S P F+SH+PVHQDG+CN
Sbjct: 841 NLVNIFDSASKPMEGNRWWLKAEDPWQCLAACFELKAALESPEPTKFVSHLPVHQDGTCN 900
Query: 450 GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHART 509
GLQHYAALG D GA VNL G+KPADVYS +A V D + D + + A
Sbjct: 901 GLQHYAALGGDTWGAKQVNLEPGDKPADVYSAVANIVKDYIAKDLETNNPF------AIA 954
Query: 510 LVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK----ERDVFSDDTKLFGASCYAAKV 565
+ ++ RK+VKQTVMT+VYGVT+ GA++Q+ ++L + S + + AS Y A +
Sbjct: 955 VNGKITRKVVKQTVMTNVYGVTFQGAKKQVLKQLDAIYPNLPIESGISSMMLAS-YIATL 1013
Query: 566 TLTALEEMFQGARSIMNWLGECA------------------------------------- 588
AL MF+GA I WLGE
Sbjct: 1014 IFKALSSMFRGAHDIQYWLGEIGGRVCRALSAEQLERIAADGIIVSPSSVNRFKITEKKE 1073
Query: 589 ----KVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQR 642
++A + WTTPL +PV QPYRK G IIKTSLQ LT+ +D V K+Q
Sbjct: 1074 SSTDDLLAQFRATIVWTTPLRMPVAQPYRKSGTRIIKTSLQDLSLTVPERSDPVNRKKQL 1133
Query: 643 TAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYE 702
AFPPNF+HSLD +HM+++A+ C + GL+FA VHDS+WTHA D+D MNR+LR F+ ++E
Sbjct: 1134 QAFPPNFIHSLDATHMLLSALECSELGLSFAAVHDSFWTHAADIDSMNRVLRDSFIRIHE 1193
Query: 703 TPILENLLEGFQ 714
++ L F+
Sbjct: 1194 EDVIGRLAAEFE 1205
>A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_01030 PE=3 SV=1
Length = 1397
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/695 (40%), Positives = 393/695 (56%), Gaps = 66/695 (9%)
Query: 70 KKQKIAAVRGIMKDQNDTKP--WGPVMRTKVGSRLVELLMQTAYIQPPS-DQIVDGSPDI 126
+K +I R I + + +P W PV++ K+G+ L +L+ TA + P+ DQ +
Sbjct: 524 RKAQIQWRRIIARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKDQKTNQQKQT 583
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA-KNMVIPYMPMLVPPVNWTGY 185
A +FR V + + G + G + + I++ L R ++ ++PM+ PP WT
Sbjct: 584 DQA---AFRRVYQLER--GFRVGYVHANDYIIEKLRREPLGELLAKHLPMVCPPRPWTSS 638
Query: 186 DKGGHLFLPSYVMRTH--GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVV 243
GG L PS VMR + Q A + L+ VF L LG T W++N+ VL+V+
Sbjct: 639 RGGGFLEYPSTVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVM 698
Query: 244 DRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIEL 302
W SG +A+L + ++ PE+PDTDD + +SQRC
Sbjct: 699 LEAWNSGEEIANLAPENPNIIEPEKPDTDDRDILKDYYRAKMHATNARTGYHSQRCFQNF 758
Query: 303 KLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQW 362
+L +AR ++E FY PHN+DFRGRAYPM P+ N +G+D CRG+L F+ GR LG SG +W
Sbjct: 759 QLEIARAYRNE-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRW 817
Query: 363 LKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCI 422
LKIHLAN++ G DK S + R F H++DI DSA L+G+RWWL+A DPFQCLA CI
Sbjct: 818 LKIHLANVF--GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACI 875
Query: 423 TLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 482
LT A+ P F+SH+PVHQDGSCNGLQHYAALG D +GA VNL ++P+D+Y+G+
Sbjct: 876 ELTNAMALEDPTKFVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGV 935
Query: 483 AARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 542
A V + QKD A + A+ L +++ RK+VKQTVMT+VYGVT++GA Q++++
Sbjct: 936 AEHV----KQSIQKDAANGNET--AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQ 989
Query: 543 LKERDVFSD--DTKLFG-ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP-- 597
L D + D + + G + Y A+ AL MF GA I WLG+CA I+ P
Sbjct: 990 LV--DHYPDLLHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCANRISQSLSPEQ 1047
Query: 598 ------------------------------------VRWTTPLGLPVVQPYRKLGRHIIK 621
V WTTPL LPV QPYR +
Sbjct: 1048 VEALSDEGNLKVVGRFQGAKKLAKNIKDPKSHFKSTVVWTTPLKLPVAQPYRDAACVKVF 1107
Query: 622 TSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSY 679
+ LQ L+++ + +D V ++Q AFPPNFVHSLD +HM ++AV C + GL+F+ VHDS+
Sbjct: 1108 SDLQQLSIRNPQASDVVNKRKQLQAFPPNFVHSLDATHMFLSAVKCDELGLSFSAVHDSF 1167
Query: 680 WTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
WTHA DVD MNR+LR FV ++ I++ L F+
Sbjct: 1168 WTHAADVDTMNRVLRDAFVRMHSEDIIQRLASEFK 1202
>G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0C00530 PE=3 SV=1
Length = 1321
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/658 (40%), Positives = 374/658 (56%), Gaps = 58/658 (8%)
Query: 90 WGPVMRTKVGSRLVELLMQTAY-----IQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKT 144
W R K+GS ++ +L+ A I P + Q V G PAF H ++
Sbjct: 564 WPQAARAKIGSIMISMLIHVAKVDLEGIDPVTKQKVHGEA---PAFSHGYQY------HN 614
Query: 145 GRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHG 202
G K G+++ ++ L+ R ++ +PMLV P W ++ GG+ + S ++R+
Sbjct: 615 GSKLGVLKIHRSLIHQLNGERLVASVQPQLLPMLVKPRPWKSWNSGGYYYTQSSLIRSKD 674
Query: 203 VKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADL----- 256
+Q +K ++ V++ L+ LG T W VN++V V+ +W SG ++
Sbjct: 675 SPEQMAYLKAVSNAGAIDTVYQGLNVLGETAWTVNRRVFDVMSEVWNSGKDFLEIPGIQE 734
Query: 257 -VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEA 315
+D P P E D + NR S RCD KL +AR E+
Sbjct: 735 KLDLLPAP-PRESDPSVHREWKLKNKEIANKFSSNR---SVRCDSNYKLEIARAFLGEK- 789
Query: 316 FYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGV 375
FY+PHN+DFRGRAYP+ PH NHLG+D+ RG+L F G+ LG G +WLK+HL+NL+ G
Sbjct: 790 FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKRLGPRGLKWLKVHLSNLF--GF 847
Query: 376 DKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPET 435
DK L R+++ E+H+ D+ SA+ PL G WW+ A+ P+Q LA CI + EA + +PE
Sbjct: 848 DKAPLADRIAYAEAHLKDVKRSAEDPLAGDGWWMKADKPWQALATCIEINEAYKLPNPED 907
Query: 436 FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQ 495
FISH PVHQDG+CNGLQHYAALG D GA VNLV ++P DVY+ +A V + + A
Sbjct: 908 FISHQPVHQDGTCNGLQHYAALGGDIEGATQVNLVPNDRPQDVYAHVAKLVQARLEAAAA 967
Query: 496 KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKL 555
K A TL +++ RK+VKQTVMT+VYGVTY+GA QI+++L +F D T
Sbjct: 968 KGDE------QAETLKDKITRKVVKQTVMTNVYGVTYVGATFQIEKQLSH--IFDDRTYS 1019
Query: 556 FGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE-------------NQP----- 597
S Y K A+ E+F GA I +WLGECAK I+ N+P
Sbjct: 1020 LELSKYLTKHVFAAVRELFHGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGNKPDFMSS 1079
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQR--ETDKVMVKRQRTAFPPNFVHSLDG 655
V WTTPLGLP+VQPYR+ + + T+LQ + + + V +RQ+ FPPNF+HSLD
Sbjct: 1080 VIWTTPLGLPIVQPYREASKKQVTTNLQTVFISDPFSVNPVNARRQKAGFPPNFIHSLDA 1139
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGF 713
SHM+++A AC + GL FA VHDSYWTHACDVD MN LR +F++L+E ++E L F
Sbjct: 1140 SHMLLSAAACGEEGLDFASVHDSYWTHACDVDQMNSCLREQFIKLHEVDLIERLKNEF 1197
>G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ichthyophthirius
multifiliis (strain G5) GN=IMG5_034000 PE=4 SV=1
Length = 926
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/614 (41%), Positives = 379/614 (61%), Gaps = 34/614 (5%)
Query: 106 LMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA 165
L+ +YI+ +Q G ++ F+HS + +E KT D L + LDRS
Sbjct: 249 LLVPSYIKSKRNQGFVGVINVNQYFLHS---MNQETDKT---------DSLFMH-LDRS- 294
Query: 166 KNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEAL 225
+PM+ PP W Y+ GG+ P+++MR + Q +++ L V+E L
Sbjct: 295 -------LPMIYPPAKWQDYEMGGYYLRPTHLMRFEDSQLQEKSLFNT---DLSKVYEIL 344
Query: 226 DTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXX 284
+ +G T WR+NK+VL+V+++IW GG + ++ + D DE +
Sbjct: 345 NIIGKTPWRINKRVLNVMEKIWEEGGDIGEIPKKYYDYTNYIHQYQVDECKDYKEKAKLM 404
Query: 285 XXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCR 344
+ R+ +S R D LKL VAR ++ + Y+PHNVDFRGR YP+ PHLNH+G+D CR
Sbjct: 405 RKIQQQRDIHSNRSDFLLKLKVARAFQNLDRIYFPHNVDFRGRLYPIPPHLNHIGADRCR 464
Query: 345 GILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEG 404
G+LEF++ + +GK+G WLK+H +NL GVDKLS + RV++TES ++I A P++
Sbjct: 465 GLLEFSESKRIGKTGWYWLKVHTSNLL--GVDKLSFDQRVAYTESQFENIKRWASDPIKN 522
Query: 405 RRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGA 464
R WL ED +Q L+ ++EAL+ +PE ISH+ VH DGSCNGLQHYAA+GRDK GA
Sbjct: 523 RE-WLQVEDCWQALSAIFEVSEALQLENPEDHISHLHVHMDGSCNGLQHYAAIGRDKYGA 581
Query: 465 AAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVM 524
VNL KP D+YS +A+ V + D + + + + A+ L Q+ RK+VKQTVM
Sbjct: 582 EQVNLRDSIKPGDLYSHVASMVEQKIDEDCKNELS--ENYEIAKKLQGQIKRKIVKQTVM 639
Query: 525 TSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWL 584
TSVYGVT++GAR+QI R+LK+RD F ++ + AS Y A VTL ++ +F A I WL
Sbjct: 640 TSVYGVTFVGARQQILRQLKDRD-FMNEEDNYKASYYLATVTLLQIKNLFTQAHYIKKWL 698
Query: 585 GECAKVIASENQPVRWTTPLGLPVVQPYRKLGR-HIIKTSLQMLTLQRETDKVMV--KRQ 641
CA +I++ PV W T +GLPVVQPYR ++I T +Q +T++ D++ + ++Q
Sbjct: 699 ISCAALISATGNPVSWITDMGLPVVQPYRNQSTLNVINTVIQKITIEANHDELPINKQKQ 758
Query: 642 RTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELY 701
R+AFPPN++HSLD +H+M TA+ C + G+ FA VHDSYWTHA DV+ ++ +LR +FV+L+
Sbjct: 759 RSAFPPNYIHSLDSTHLMYTAIECNKLGIYFAAVHDSYWTHAADVEILHDVLRKQFVKLH 818
Query: 702 ETPILENLLEGFQK 715
P+LE+L FQ+
Sbjct: 819 SQPLLEDLRNSFQR 832
>D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocystis hominis
GN=GSBLH_T00000052001 PE=3 SV=1
Length = 595
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/550 (46%), Positives = 340/550 (61%), Gaps = 15/550 (2%)
Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
I Y PMLVPP W D GG + + MRTHG K Q + + +A L VF +L+ LG
Sbjct: 24 IRYKPMLVPPRPWLSVDSGGFISQKTVFMRTHGSKLQTDCLYQA---DLTSVFRSLNILG 80
Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
W +NK VL V + +W +GG D+ R D+ +P+ + + E + +
Sbjct: 81 KVGWVINKDVLKVAEAVWENGGGELDIPSRTDLKMPDPSEFESEKKYRKAMMKIKQ---K 137
Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
N + +S RCD+ KL +AR+ +++ Y+P N+DFRGR YP+ PHLNHLG+D+CRG+L F
Sbjct: 138 NYDLHSLRCDLGYKLDIAREFQND-TIYFPMNLDFRGRVYPIPPHLNHLGNDLCRGLLSF 196
Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
A +PLG+ G WLKI +ANLY G DK+S + R + + H+ I +S PL WW
Sbjct: 197 ARKKPLGERGLFWLKIQVANLY--GNDKISFDDRSKWVDEHLPAIRESVRNPLAPNAWWK 254
Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
+DP+Q LA C+ A+ S PE ++S+IPVHQDGSCNGLQHYAALG DK G VNL
Sbjct: 255 EGDDPWQLLATCMEYIRAIDSPHPEAYLSNIPVHQDGSCNGLQHYAALGLDKTGGTQVNL 314
Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
V KP DVYS + V + + D + A +V+RK+VKQTVMTSVYG
Sbjct: 315 VPSSKPGDVYSAVLRIVKERIHEDLRNPDASIRAMAELLRGGEEVNRKVVKQTVMTSVYG 374
Query: 530 VTYIGAREQIKRRLKER----DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLG 585
VT++GAREQI+ +L R + DD L+ S Y A +TL ++ +GA +IM WL
Sbjct: 375 VTFVGAREQIEGQLNARRDDKKIDFDDDMLYALSMYLAGLTLGSIGVTNKGATTIMAWLN 434
Query: 586 ECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD--KVMVKRQRT 643
+ A +IA N PV W TPLGLPVVQPYRK I T++Q + ++ D V+ ++Q +
Sbjct: 435 KIAAIIAHTNSPVCWVTPLGLPVVQPYRKENVFHIATAMQDVQVKVNNDVLPVLTRKQSS 494
Query: 644 AFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYET 703
AFPPNFVHSLD +HMMMT++ C + + FA VHDSYWTHACDVD MN +LR +FV+LY
Sbjct: 495 AFPPNFVHSLDSTHMMMTSLVCDKYDMDFATVHDSYWTHACDVDTMNHLLREQFVKLYSQ 554
Query: 704 PILENLLEGF 713
PILEN LE
Sbjct: 555 PILENFLESL 564
>F1Q5F7_DANRE (tr|F1Q5F7) DNA-directed RNA polymerase OS=Danio rerio
GN=si:dkey-21e2.1 PE=3 SV=1
Length = 1281
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/646 (41%), Positives = 379/646 (58%), Gaps = 45/646 (6%)
Query: 85 NDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIR--PAFVHSFRTVTKEAK 142
+D PW ++ ++GS LV+L++ IQ I++ + + + P H +
Sbjct: 607 SDDTPWPMILMVQLGSFLVDLMVHELKIQ---SNILNPALEKKLIPILYHMY------TF 657
Query: 143 KTGRKFGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYVM 198
++ K G I+ P++ + L R A + + MPML PPV WT G +L P+ +M
Sbjct: 658 RSNHKIGFIKPHPILTRIL-REATETKLTFDSYVMPMLCPPVPWTSPKSGAYLLTPAKLM 716
Query: 199 R-THGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLV 257
R + G Q + +++ ++ L V ++L+ +G W++NK +L ++ I+ G
Sbjct: 717 RASDGAMQHQLLLEKTQEEDLHAVLDSLNQVGSCPWKINKPLLDIIISIFNDKGS----- 771
Query: 258 DRDDVPLPE---------EPDTDDEAQIXXXXXXXXXXXXEN--RERYSQRCDIELKLAV 306
D+ +P P P Q+ + E +S R D KL++
Sbjct: 772 DKLSIPPPLSEAPEIPRFNPHDPSYTQVEKAFMKREGIKAKKVVAEMHSLRMDALYKLSI 831
Query: 307 ARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIH 366
A ++D+ F++PHN+DFRGR YP+ P+ NHLGSDV R +L FA+GRPLG G WLKIH
Sbjct: 832 ANHVRDK-IFWFPHNMDFRGRTYPLPPYFNHLGSDVTRALLLFAEGRPLGPKGLDWLKIH 890
Query: 367 LANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTE 426
L NL G + SL+GR+ + ES ++DI DSAD PL+GR+WW+NA++P+Q LA C+ +
Sbjct: 891 LVNL-TGLKKQSSLDGRLEYAESIMEDILDSADHPLDGRKWWMNADEPWQALACCMEIAN 949
Query: 427 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 486
A RS FIS+ PVHQDGSCNGLQHYAALGRD +GA +VNL+ P DVYSG+A +V
Sbjct: 950 ASRSPDHHKFISYFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCALPQDVYSGVAKQV 1009
Query: 487 LDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER 546
+ DA++ I A+ L + RK+VKQTVMT VYGVT G R QI++RLKE
Sbjct: 1010 EEFRVRDAERGLKI------AQVLQGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEI 1063
Query: 547 DVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGL 606
D F D ++ AS Y +L+EMF G R I WL E A++IA + V W TPLGL
Sbjct: 1064 DDFPKDY-VWDASHYLVVQVFNSLKEMFTGTREIQEWLTESARLIAKSGRTVEWVTPLGL 1122
Query: 607 PVVQPYRKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAV 663
P++QPY ++ I+K ++Q L + D K +Q+ AFPPNF+HSLD +HMM+T++
Sbjct: 1123 PIIQPYHRIRNQILKGNIQNLNIHISHDANEKPDSMKQKNAFPPNFIHSLDSTHMMLTSL 1182
Query: 664 ACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
C +AGL F VHD YWTHA VD MNR+ R +FV L+ PILE L
Sbjct: 1183 HCHRAGLTFVSVHDCYWTHAVTVDIMNRVCREQFVALHSQPILEEL 1228
>H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur garnettii
GN=POLRMT PE=3 SV=1
Length = 1234
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/636 (41%), Positives = 379/636 (59%), Gaps = 32/636 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW + ++G +L E+L+Q + P S GS + P H SFR+
Sbjct: 563 QPWPVPVLLQLGRQLAEILVQAVQM-PGSLAAPQGSCRLIPVLYHVYSFRSY-------- 613
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMR-TH 201
R+ GI++ P ++ L ++A+ + +PML PP+ WT G L P+ +MR
Sbjct: 614 RQIGILKPHPAFVQLLAKAAEPTLTFETVDVPMLCPPLPWTSPHSGAFLLSPTKLMRAVE 673
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q + ++R P +L +AL LG+ WRVN +VL +V ++ G L
Sbjct: 674 GTTQHQRLLERCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFRGKGCSHLGVPPPA 733
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P A+ RE +S R D +L++A+ ++ F
Sbjct: 734 SEAPRPPEGHLPPDAPPARKAELRRELARCLKVAREMHSLRADALYRLSLAQHLR-HHIF 792
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSD+ R +LEFA+GRPLG G WLKIHLANL G
Sbjct: 793 WLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPHGLDWLKIHLANL-TGLKK 851
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ SL R++F + +DDI DSAD+P+ GR+WW+ A++P+Q LA C+ + A+R+ +P T+
Sbjct: 852 RASLHERLAFADEVMDDILDSADQPMMGRKWWMGADEPWQALACCMEIARAVRTPNPATY 911
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL+ + P DVYSG+AA+V R DA++
Sbjct: 912 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLMPLDLPQDVYSGVAAQVEIFRRQDAKE 971
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 972 GLQV------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VW 1024
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I++ V W TPLG+P+VQPY +
Sbjct: 1025 EASHYLVRQVFHSLQEMFSGTRAIQHWLTESARLISNAGSAVEWVTPLGIPIVQPYHQDS 1084
Query: 617 RHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFA 673
+ ++K +Q +T D K +Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1085 KVLVKGGIQSITCNSGKDSSQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFV 1144
Query: 674 GVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD +WTHA DV MN++ R +F+ L+ PIL++L
Sbjct: 1145 SVHDCFWTHAADVPVMNQVCREQFIHLHSQPILQDL 1180
>H3CZ72_TETNG (tr|H3CZ72) DNA-directed RNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=POLRMT PE=3 SV=1
Length = 1014
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/641 (40%), Positives = 384/641 (59%), Gaps = 47/641 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPD--IRPAFVHSFRTVTKEAKKTGRK 147
W ++ ++G+ +V+L+++ I + I++ + D + P H + A ++ R+
Sbjct: 347 WPYIVTLELGTYMVDLMVKNLKI---NSDILNPAHDRKLIPVLYHMY------AFRSTRQ 397
Query: 148 FGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYVMRT-HG 202
G I+ P IL + + A + + MPML PPV WT G +L P+ +MRT G
Sbjct: 398 IGFIKPHP-ILSQMQQEAMETKLTFDSYVMPMLCPPVPWTSVRFGAYLLTPTKLMRTVEG 456
Query: 203 VKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDV 262
Q +++ + L PV ++L+ LG+ W++NK VL ++ I+ G ++ D+
Sbjct: 457 AMQHDVLLEKC--QNLHPVLDSLNQLGNCAWKINKPVLDIIISIFNDRGS-----EKLDI 509
Query: 263 PLP--EEP-----DTDDEAQIXXXXXXXXXXXXENRERYSQ----RCDIELKLAVARKMK 311
P P E P + D +++YS+ R D KL++A M+
Sbjct: 510 PPPLTEAPRIPHFNPHDPNYTASEKALMKRQVMSAKKKYSEMHSLRMDALYKLSIAHHMR 569
Query: 312 DEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLY 371
DE F++PHN+DFRGR YP P+ NHLGSDV R L FA+G+PLG G WLKIHL NL
Sbjct: 570 DE-IFWFPHNMDFRGRTYPCPPYFNHLGSDVTRATLLFAEGKPLGAKGLDWLKIHLVNL- 627
Query: 372 AGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSS 431
G + SL+GR+ + ++ ++DI DSAD PL+G++WW+NA++P+Q L+ C+ + A+R+
Sbjct: 628 TGLKKRSSLQGRLEYADTIMEDILDSADNPLKGKKWWMNADEPWQALSCCMEIANAVRAP 687
Query: 432 SPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMR 491
FISH PVHQDGSCNGLQHYAALGRD +GA +VNL+ E P DVYSG+A +V ++
Sbjct: 688 DSTQFISHFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEVPQDVYSGVAQQVEELRA 747
Query: 492 SDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSD 551
DA+ I A+ L + RK+VKQTVMT VYGVT G R QI++RLKE D F
Sbjct: 748 RDAKSGLKI------AQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPK 801
Query: 552 DTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQP 611
+ ++ AS Y ++ + L+EMF G R I +WL E A++I+ V W TPLGLP++QP
Sbjct: 802 E-HVWDASHYLVRLVFSGLKEMFTGTREIQDWLTESARLISKSGHTVEWVTPLGLPIIQP 860
Query: 612 YRKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQA 668
Y + ++K+++Q + LQ D + +Q+ AFPPNF+HSLD +HMM+TA+ C A
Sbjct: 861 YHRTRNQVLKSTMQHINLQINHDTKERPDTVKQKNAFPPNFIHSLDSTHMMLTALHCYSA 920
Query: 669 GLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
GL F VHD +WTHA VD MN++ R +FV L+ PIL+ L
Sbjct: 921 GLTFVSVHDCFWTHALTVDTMNKVCREQFVALHSQPILQEL 961
>Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor) OS=Xenopus laevis
GN=polrmt PE=2 SV=1
Length = 1235
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/640 (40%), Positives = 383/640 (59%), Gaps = 45/640 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVD-GSPDIRPAFVH--SFRTVTKEAKKTGR 146
W + ++G+ LV+L++Q I+ P+D + P + P H SFR+ +
Sbjct: 568 WPNTLLVQLGTHLVDLMVQE--IKVPNDLLSSRDDPKLIPVLYHMYSFRST--------K 617
Query: 147 KFGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
+ G+I+ P I + A+ + + MPML PPV W G +L P+ +MR
Sbjct: 618 QIGLIKPHP-IFSQIQLDARESCLTFESSVMPMLCPPVPWMSPRFGAYLLSPAKLMRCME 676
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
G Q + ++++P QL PV ++L+ LG WR+N+ +L ++ I+ G ++ D
Sbjct: 677 GAVQHQLLLEKSPPGQLYPVLDSLNQLGMCAWRINQTILDIIVSIFNLKGN-----EKLD 731
Query: 262 VP--------LPEEPDTD-DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+P +PE+P D + ++ E +S R D KL++A ++D
Sbjct: 732 IPPPISEAPKMPEQPHGDVNSKDKLMHQRELARCRKKSSEMHSLRMDALYKLSIASHLRD 791
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
+ F++PHN+DFRGR YP P+ NHLGSDV R +L FA+GRPLG G +WLKIHL NL
Sbjct: 792 K-IFWFPHNMDFRGRTYPCPPYFNHLGSDVTRALLLFAEGRPLGPKGLEWLKIHLINL-T 849
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
G + SL+ R + ++ +DDI DSAD PL+G+RWW+ A++P+Q LA C+ + +A RS
Sbjct: 850 GLKKRNSLKERKEYADAIMDDILDSADNPLKGKRWWMEADEPWQALACCMEIAKASRSPD 909
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P +ISH PVHQDGSCNGLQHYAALGRD++GA +VNL+ + P DVYSG+A +V + +
Sbjct: 910 PTKYISHFPVHQDGSCNGLQHYAALGRDEIGAKSVNLMPCDTPQDVYSGVAQQVEEFCKR 969
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
DAQ+ I A+ L + RK+VKQTVMT VYGVT G R QI++RL+E D F +
Sbjct: 970 DAQRGVKI------AQILDGFIGRKVVKQTVMTVVYGVTRYGGRLQIEKRLREMDNFPKE 1023
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
++ AS Y + ++L+EMF G R I WL E A++I+ V W TPLGLP++QPY
Sbjct: 1024 Y-VWEASHYLVQQVFSSLKEMFSGTREIQLWLTESARMISKSGNTVEWQTPLGLPIIQPY 1082
Query: 613 RKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAG 669
+ + ++LQ++ LQ D + +Q+ AFPPNF+HSLD +HMM+TA+ C G
Sbjct: 1083 HRAKPVLFHSNLQVVNLQSSHDVNERPDTMKQKNAFPPNFIHSLDSTHMMLTALHCYSHG 1142
Query: 670 LAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
L F VHD +WTH VD MN++ R +FV L+ PIL+NL
Sbjct: 1143 LTFVSVHDCFWTHPDTVDVMNKVCREQFVALHSQPILQNL 1182
>M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (strain DJM 731)
GN=DACRYDRAFT_54516 PE=4 SV=1
Length = 988
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/698 (39%), Positives = 405/698 (58%), Gaps = 74/698 (10%)
Query: 73 KIAAVRGIMKDQNDTK-----PWGPVMRTKVGSRLVELLMQTAYI-----QPPSDQIVDG 122
++AA+R +D D W V+R +VG L+ ++ A I +P + + V
Sbjct: 173 ELAAIRQQARDSEDFTMAIPPDWTQVIRGRVGGFLLNAVIDVATITRRGIRPSTGEEVS- 231
Query: 123 SPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA-KNMVIP-YMPMLVPPV 180
+ +PAF H + + GRK G+I+ +P + + L K+ + P +PML+PP
Sbjct: 232 --EEQPAFAHCYEFLH------GRKIGLIKFNPELTEQLSSEPIKDALHPRQLPMLIPPR 283
Query: 181 NWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-QLEPVFEALDTLGHTKWRVNKKV 239
W ++G +++ + VMR +Q ++ A LE ++ ALD LG T W +N+ +
Sbjct: 284 PWIDVERGAYMYSRTSVMRYKDSLEQSSFLRSASSAGHLESMYAALDVLGSTPWTINRPI 343
Query: 240 LSVVDRIWASGGRLADL----VDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYS 295
VV +W SG + A + ++ +D P+ +TD +A+ + E +S
Sbjct: 344 FDVVIAVWNSGKQFAKIPPAGLEGEDPVKPDNYETDPKAK-RDFVRAMSTSIQKRHENHS 402
Query: 296 QRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPL 355
RCD KL +AR E FY+PHNVDFRGRAYP+ P+LNH+G D+CRG+L FAD + L
Sbjct: 403 MRCDTNYKLEIARAFLGER-FYFPHNVDFRGRAYPVPPNLNHMGDDLCRGLLTFADKKAL 461
Query: 356 GKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPF 415
G+ G +WLKIH AN + G DK S E RV++T H+D+I+DSA KPL+G+RWWL A+DP+
Sbjct: 462 GERGLRWLKIHAANKF--GYDKASFEERVTWTMEHLDEIYDSAKKPLDGQRWWLKADDPW 519
Query: 416 QCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 475
Q LA CI L AL S +P F S +PVHQDG+CNGLQHYAALG D GA VNL G++P
Sbjct: 520 QFLASCIELHNALESPNPAEFESSLPVHQDGTCNGLQHYAALGGDGQGARQVNLDVGDRP 579
Query: 476 ADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGA 535
ADVY+ +A V + + D A A+ L ++ RK+VKQTVMT+VYGVT++GA
Sbjct: 580 ADVYTFVANMV------EKRLDEAAAKGDEKAKWLQGRIARKVVKQTVMTTVYGVTFVGA 633
Query: 536 REQIKRRLKERDVFS-DDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE-CAKVIAS 593
R+QI+++++ S + + + + Y A++TL+ + ++F GA+SI WL + CA + S
Sbjct: 634 RDQIRKQIEALPGVSISEQESYAMAVYVARLTLSCIGDLFGGAKSIQLWLNKVCALITKS 693
Query: 594 -------------------ENQPVR---------------WTTPLGLPVVQPYRKLGRHI 619
N P++ WTTPLG+PVVQPYRK +
Sbjct: 694 IPPERIDLLLRDKEYAGEVRNAPMKRTYTSLVKEQMTSMIWTTPLGMPVVQPYRKQAKKQ 753
Query: 620 IKTSLQMLTLQRET--DKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHD 677
I TSLQ L + +V ++Q +AFPPNF+HSLD +HMM+TA+ C+ L FA VHD
Sbjct: 754 IYTSLQSLFIADPNLPMEVSSRKQASAFPPNFIHSLDATHMMLTALGCRDKQLTFASVHD 813
Query: 678 SYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
SYWTHA +D+M+ +R FV+L+ IL NLL Q+
Sbjct: 814 SYWTHAASIDEMSATIRDTFVKLHSADILGNLLLEIQQ 851
>D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichophyton verrucosum
(strain HKI 0517) GN=TRV_06503 PE=3 SV=1
Length = 1305
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/708 (37%), Positives = 395/708 (55%), Gaps = 59/708 (8%)
Query: 48 AGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKP---WGPVMRTKVGSRLVE 104
A E A E L K + R M+ +P W K+G+ L
Sbjct: 432 AVEEAQSENEVYYLNKTFRQMKVYNSTGKFRSYMQKHTKDQPPVHWPASTEIKIGALLSS 491
Query: 105 LLMQTAYI-----QPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILK 159
+L TA I P ++++ PAF H ++ + G G ++ +++
Sbjct: 492 MLFSTAEIPTSHKDPVTEKVTYAK---EPAFQHVYQL------QKGHNVGYVQLHEKVVE 542
Query: 160 GLDRS-AKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKK-Q 217
L + + N++ ++PM+ P W ++GG L P+ V+RT Q + ++ A +
Sbjct: 543 RLRKEPSGNLLAKHLPMVSTPRPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRGD 602
Query: 218 LEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQI 276
L+ +++ L LG T W++N+ V V+ W SG +A++V + ++ E+PD DD +
Sbjct: 603 LDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDADDHEAV 662
Query: 277 XXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLN 336
+ +SQRC + ++ +AR +E +FY PHN+DFRGRAYP+ P+ N
Sbjct: 663 KAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYFN 721
Query: 337 HLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFD 396
+G+D CRG+L F++GR LG+SG +WL+IHL+N++ G DK S + R F HVDDI D
Sbjct: 722 QMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVDDILD 779
Query: 397 SADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAA 456
SA+ L+G+RWWL A DPFQCLA C+ L AL P ++SH+PVHQDGSCNGLQHYAA
Sbjct: 780 SANNGLKGKRWWLQAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYAA 839
Query: 457 LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDR 516
LG D +GA VNL G++P+D+Y+ +A V + SDA+ I A+ + ++ R
Sbjct: 840 LGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDPI------AKLMDGKITR 893
Query: 517 KLVKQTVMTSVYGVTYIGAREQIKRRLKER-DVFSDDTKLFGASCYAAKVTLTALEEMFQ 575
K+VKQTVMT+VYGVT+IGA Q++R++++ ++ ++ + + ++ +AL MF
Sbjct: 894 KVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSMFS 953
Query: 576 GARSIMNWLGECAKVIASE---------------------------NQPVRWTTPLGLPV 608
GA I WLG+CA + N V WTTPL LPV
Sbjct: 954 GAHDIQFWLGDCANRVTRSLNPSQIEEIRKELDSPSKTDLSKKLKFNNSVIWTTPLKLPV 1013
Query: 609 VQPYRKLGRHIIKTSLQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 666
VQPYR+ I TSLQ+ T++ R ++V ++Q AFPPNF+HSLD +HMM++A+ C
Sbjct: 1014 VQPYREAKARQIPTSLQLCTIKDIRGANEVNRRKQLQAFPPNFIHSLDATHMMLSAIKCD 1073
Query: 667 QAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
+ GL F+ VHDS+WTHA D+D MNR+LR FV ++ I+ L F
Sbjct: 1074 ELGLTFSAVHDSFWTHAGDIDKMNRVLRDAFVRMHSDDIVGRLAAEFN 1121
>G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_86464 PE=3 SV=1
Length = 1416
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/779 (36%), Positives = 420/779 (53%), Gaps = 94/779 (12%)
Query: 7 VKSLAMGATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVI 66
+ SLAMG + L I KF E + + K+ + +
Sbjct: 458 LSSLAMGGAHKGSTIASLITHIAKFAEEDIRVQKAEALISKHNLRKAKSKQH---NPRSV 514
Query: 67 DLMKKQKIAAVRGIMKDQN------DTKPWGPVMRTKVGSRLVELLMQTAYI-----QPP 115
K +A M D N D + W +RTKVG+ L+ L+ TA I P
Sbjct: 515 LRFKNSTASAGSSDMADSNNVAVEMDDEAWTTTIRTKVGAALLSALLDTAKITLVREDPV 574
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS-AKNMVIPYMP 174
+ ++ + +PAF H + + G+K G I + +++ L R + + ++P
Sbjct: 575 TKTLITQN---QPAFSHVMQL------RKGKKIGTIIPNKAVVELLVREPVPDFLARHLP 625
Query: 175 MLVPPVNWTGYDKGGHLFLPSYVMR-THGVKQQREAVKRA-PKKQLEPVFEALDTLGHTK 232
M+ PP W ++KG +L + V+R +G ++QR + A + ++ VF+ LD LG T
Sbjct: 626 MVTPPDPWVSFEKGAYLETKTPVLRLKNGEREQRLYTEAAIARGDMDQVFKGLDVLGKTG 685
Query: 233 WRVNKKVLSVVDRIWASGGRLADLVDRDDV-PLPEEPDTDDEAQIXXXXXXXXXXXXENR 291
W++N V V+ +W SG ++A++ D + LP EP + ++ + R
Sbjct: 686 WKINSPVFKVMLDVWNSGKKVANIPPLDPIFDLPPEPASTEDPTVKRAWLKEIKVIENER 745
Query: 292 E-RYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFA 350
+SQRC + +L +AR +D+ FY+PHNVDFRGRAYP+ P+LNH+G+D RG++ FA
Sbjct: 746 SGLHSQRCFMNFQLEIARAYRDQ-TFYFPHNVDFRGRAYPIPPYLNHMGADHVRGLMLFA 804
Query: 351 DGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLN 410
G+PLG+SG +WLK+HLAN+Y G DK SL+ R F + ++++I DS PL G +WWL
Sbjct: 805 KGKPLGESGLRWLKVHLANVY--GFDKASLQERQDFADENIENIRDSVINPLNGNQWWLQ 862
Query: 411 AEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 470
AEDP+QCLA C L AL P ++SH+P+HQDG+CNGLQHYAALG D GA VNLV
Sbjct: 863 AEDPWQCLATCFELAAALELEDPTQYVSHLPIHQDGTCNGLQHYAALGGDTWGAQQVNLV 922
Query: 471 AGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGV 530
G++PADVYS +A V+ + D KD F A+H + + RK+VKQTVMT+VYGV
Sbjct: 923 PGDRPADVYSAVAKLVIKGIEDDLAKDNE-FAKAMHGK-----ITRKVVKQTVMTNVYGV 976
Query: 531 TYIGAREQIKRRLKERDVFSDDTKLFG--ASCYAAKVT---LTALEEMFQGARSIMNWLG 585
TY+GA++Q+ ++++ + + T G A+ A+ VT A+ MF+GA I NWLG
Sbjct: 977 TYVGAKKQVLKQIEA--AYPNITAESGIEAALLASYVTQHIFRAMSTMFKGAHDIQNWLG 1034
Query: 586 ECAKVIA-------------SENQP----------------------------------- 597
E + SE P
Sbjct: 1035 EIGGRVCRALTPEQLDEFERSERSPHGDGTASGENITLAGNPRKSSAHKNDEILNNFQST 1094
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
+ WTTPL +PVVQPYRK G + T +Q ++T+ +D V ++Q AFPPNF+HSLD
Sbjct: 1095 IIWTTPLRMPVVQPYRKHGTKTVSTCMQDLVMTIPERSDPVNRRKQLQAFPPNFIHSLDA 1154
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHM+++A+ C + GL FA VHDS+WTHA DVD MN +LR F+ ++ ++ L FQ
Sbjct: 1155 SHMILSALHCDELGLTFAAVHDSFWTHASDVDSMNAVLRDAFIRIHSEDVIGRLAAEFQ 1213
>F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2508 / ATCC MYA-4615 / P0657)
GN=NEUTE1DRAFT_121093 PE=3 SV=1
Length = 1416
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/779 (36%), Positives = 420/779 (53%), Gaps = 94/779 (12%)
Query: 7 VKSLAMGATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVI 66
+ SLAMG + L I KF E + + K+ + +
Sbjct: 458 LSSLAMGGAHKGSTIASLITHIAKFAEEDIRVQKAEALISKHNLRKAKSKQH---NPRSV 514
Query: 67 DLMKKQKIAAVRGIMKDQN------DTKPWGPVMRTKVGSRLVELLMQTAYI-----QPP 115
K +A M D N D + W +RTKVG+ L+ L+ TA I P
Sbjct: 515 LRFKNSTASAGSSDMADSNNVAVEMDDEAWTTTIRTKVGAALLSALLDTAKITLVREDPV 574
Query: 116 SDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRS-AKNMVIPYMP 174
+ ++ + +PAF H + + G+K G I + +++ L R + + ++P
Sbjct: 575 TKTLITQN---QPAFSHVMQL------RKGKKIGTIIPNKAVVELLVREPVPDFLARHLP 625
Query: 175 MLVPPVNWTGYDKGGHLFLPSYVMR-THGVKQQREAVKRA-PKKQLEPVFEALDTLGHTK 232
M+ PP W ++KG +L + V+R +G ++QR + A + ++ VF+ LD LG T
Sbjct: 626 MVTPPDPWVSFEKGAYLETKTPVLRLKNGEREQRLYTEAAIARGDMDQVFKGLDVLGKTG 685
Query: 233 WRVNKKVLSVVDRIWASGGRLADLVDRDDV-PLPEEPDTDDEAQIXXXXXXXXXXXXENR 291
W++N V V+ +W SG ++A++ D + LP EP + ++ + R
Sbjct: 686 WKINSPVFKVMLDVWNSGKKVANIPPLDPIFDLPPEPASTEDPTVKRAWLKEIKVIENER 745
Query: 292 E-RYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFA 350
+SQRC + +L +AR +D+ FY+PHNVDFRGRAYP+ P+LNH+G+D RG++ FA
Sbjct: 746 SGLHSQRCFMNFQLEIARAYRDQ-TFYFPHNVDFRGRAYPIPPYLNHMGADHVRGLMLFA 804
Query: 351 DGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLN 410
G+PLG+SG +WLK+HLAN+Y G DK SL+ R F + ++++I DS PL G +WWL
Sbjct: 805 KGKPLGESGLRWLKVHLANVY--GFDKASLQERQDFADENIENIRDSVINPLNGNQWWLQ 862
Query: 411 AEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 470
AEDP+QCLA C L AL P ++SH+P+HQDG+CNGLQHYAALG D GA VNLV
Sbjct: 863 AEDPWQCLATCFELAAALELEDPTQYVSHLPIHQDGTCNGLQHYAALGGDTWGAQQVNLV 922
Query: 471 AGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGV 530
G++PADVYS +A V+ + D KD F A+H + + RK+VKQTVMT+VYGV
Sbjct: 923 PGDRPADVYSAVAKLVIKGIEDDLAKDNE-FAKAMHGK-----ITRKVVKQTVMTNVYGV 976
Query: 531 TYIGAREQIKRRLKERDVFSDDTKLFG--ASCYAAKVT---LTALEEMFQGARSIMNWLG 585
TY+GA++Q+ ++++ + + T G A+ A+ VT A+ MF+GA I NWLG
Sbjct: 977 TYVGAKKQVLKQIEA--AYPNITAESGIEAALLASYVTQHIFRAMSTMFKGAHDIQNWLG 1034
Query: 586 ECAKVIA-------------SENQP----------------------------------- 597
E + SE P
Sbjct: 1035 EIGGRVCRALTPEQLDEFERSERSPHGDGTASGENITLAGNPRKSSAHKNDEILNNFQST 1094
Query: 598 VRWTTPLGLPVVQPYRKLGRHIIKTSLQ--MLTLQRETDKVMVKRQRTAFPPNFVHSLDG 655
+ WTTPL +PVVQPYRK G + T +Q ++T+ +D V ++Q AFPPNF+HSLD
Sbjct: 1095 IIWTTPLRMPVVQPYRKHGTKTVSTCMQDLVMTIPERSDPVNRRKQLQAFPPNFIHSLDA 1154
Query: 656 SHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
SHM+++A+ C + GL FA VHDS+WTHA DVD MN +LR F+ ++ ++ L FQ
Sbjct: 1155 SHMILSALHCDELGLTFAAVHDSFWTHASDVDSMNAVLRDAFIRIHSEDVIGRLAAEFQ 1213
>C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL
Y-229) GN=ZYRO0F02882g PE=3 SV=1
Length = 1311
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/666 (40%), Positives = 378/666 (56%), Gaps = 56/666 (8%)
Query: 81 MKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQ-----PPSDQIVDGSPDIRPAFVHSFR 135
MK + + W R K+GS L+ +L+ + ++ P + Q V G PAF H ++
Sbjct: 545 MKIEENKIMWPQAARAKIGSILISMLIHVSKVEVEGVDPVTKQKVYGEA---PAFAHGYQ 601
Query: 136 TVTKEAKKTGRKFGIIECDPLILKGLD--RSAKNMVIPYMPMLVPPVNWTGYDKGGHLFL 193
G K G+++ ++ L+ R ++ +PMLV P W + GG+ +
Sbjct: 602 Y------HNGSKLGVLKIHRSLVHQLNGERLVASVQPQLLPMLVKPRPWKNWKSGGYYYT 655
Query: 194 PSYVMRTHGVKQQREAVKR-APKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
S ++R+ +Q +K + + V++ L+ LG T W VN+ + V+ ++W SG
Sbjct: 656 QSTLIRSKDSPEQIAYLKAVSDATAINTVYDGLNVLGETPWTVNRPLFEVMSKVWNSGKP 715
Query: 253 LADLVDRDDV-----PLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVA 307
D+ + P P E D + NR S RCD KL +A
Sbjct: 716 FLDIPGVQEKLTLLPPPPREADPSVHREWKLKNKELANRFSSNR---STRCDSNYKLEIA 772
Query: 308 RKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHL 367
R E+ FY+PHN+DFRGRAYP+ PH NHLG+D+ RG+L F +G+ LG G +WLK+HL
Sbjct: 773 RAFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLLFWNGKRLGPQGLKWLKVHL 831
Query: 368 ANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEA 427
+NL+ G DK SL RV F + H+DDI SA PL+ WW+ AE P+Q LA C+ L +A
Sbjct: 832 SNLF--GFDKASLLERVQFADEHIDDIKQSAQDPLKEDAWWMKAEKPWQALATCMELNDA 889
Query: 428 LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 487
++ +PE FISH PVHQDG+CNGLQHYAALG D GA VNLV ++P DVY+ +A V+
Sbjct: 890 MKLDNPEDFISHQPVHQDGTCNGLQHYAALGGDIDGATQVNLVPNDRPQDVYAHVAKLVI 949
Query: 488 DIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERD 547
+ A K + A L +++ RK+VKQTVMT+VYGVTY+GA QI ++L +
Sbjct: 950 ARLEIAAAKGDEV------AMILKDKITRKVVKQTVMTNVYGVTYVGATFQIDKQLS--N 1001
Query: 548 VFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASE------------- 594
+F D S Y K A+ E+FQGA I +WLGECAK I+
Sbjct: 1002 IFEDRKYSLELSKYLTKHVFGAVRELFQGAHLIQDWLGECAKRISKSIRLDVDEKSFKNG 1061
Query: 595 NQP-----VRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRE--TDKVMVKRQRTAFPP 647
N+P V WTTPLGLP+VQPYR+ + + T+LQ + + + V +RQ+ FPP
Sbjct: 1062 NKPDFMTSVIWTTPLGLPIVQPYRETSKKQVTTNLQTVFISDPFGVNPVNARRQKAGFPP 1121
Query: 648 NFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILE 707
NF+HSLD SHM+++A C + GL FA VHDSYWTHACDVD+MN LR +F+ L+E ++E
Sbjct: 1122 NFIHSLDASHMLLSAAECGRNGLDFASVHDSYWTHACDVDNMNVFLREQFIRLHEVDLIE 1181
Query: 708 NLLEGF 713
L + F
Sbjct: 1182 RLKDEF 1187
>F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus tropicalis
GN=polrmt PE=3 SV=1
Length = 1225
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/640 (41%), Positives = 381/640 (59%), Gaps = 45/640 (7%)
Query: 90 WGPVMRTKVGSRLVELLMQTAYIQPPSDQIVD-GSPDIRPAFVH--SFRTVTKEAKKTGR 146
W + ++G+ LV+L++Q I+ P+D + P + P H SFR+ +
Sbjct: 558 WPNSLLVQLGTHLVDLMVQE--IKVPNDLLSSRDDPKLIPVLYHMYSFRST--------K 607
Query: 147 KFGIIECDPLILKGLDRSAKNMVIPY----MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
+ G+I+ P I + A + + MPML PPV W G +L P+ +MR
Sbjct: 608 QIGLIKPHP-IFSQIQSDAGESCLTFESSVMPMLCPPVPWLSPRFGAYLLSPAKLMRCME 666
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
G Q + ++++P QL PV ++L+ LG WR+N+ +L ++ I+ G ++ D
Sbjct: 667 GAVQHQLLLEKSPPGQLYPVLDSLNQLGMCAWRINQPILDIIVSIFNEKGN-----EKLD 721
Query: 262 VP--------LPEEPDTD-DEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
+P LPE+P D + ++ E +S R D KL++A ++D
Sbjct: 722 IPPPLSEAPKLPEQPHGDLNSRDKMMHQRELARCRKKSSEMHSLRMDALYKLSIASHLRD 781
Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
+ F++PHN+DFRGR YP P+ NHLGSDV R +L FA+GRPLG G +WLK HL NL
Sbjct: 782 K-IFWFPHNMDFRGRTYPCPPYFNHLGSDVTRALLLFAEGRPLGPKGLEWLKTHLINL-T 839
Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
G + SL+ R + +S +DDI DSAD PL+G+RWW+ A++P+Q LA C+ + A RS
Sbjct: 840 GLKKRNSLQERKEYADSVMDDILDSADNPLKGKRWWMEADEPWQALACCMEIANASRSPD 899
Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
P +ISH PVHQDGSCNGLQHYAALGRD++GA +VNL+ + P DVYSG+A +V + +
Sbjct: 900 PTKYISHFPVHQDGSCNGLQHYAALGRDEIGAKSVNLMPCDIPQDVYSGVAQQVEEFRKR 959
Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
DAQ+ I A+ L + RK+VKQTVMT VYGVT G R QI++RL+E D F +
Sbjct: 960 DAQRGVKI------AQILDGFIGRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELDNFPKE 1013
Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
++ AS Y + ++L+EMF G R I WL E A++I+ V W TPLGLP++QPY
Sbjct: 1014 Y-VWEASHYLVQQVFSSLKEMFSGTREIQLWLTESARMISKSGNTVEWQTPLGLPIIQPY 1072
Query: 613 RKLGRHIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAG 669
+ + +++LQ++ LQ D + +Q+ AFPPNF+HSLD +HMM+TA+ C G
Sbjct: 1073 HRTKPVLFQSNLQVVNLQSSHDVNERPDTMKQKNAFPPNFIHSLDSTHMMLTALHCYSHG 1132
Query: 670 LAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
L F VHD +WTH VD MN++ R +FV L+ PIL+NL
Sbjct: 1133 LTFVSVHDCFWTHPDTVDVMNKVCREQFVALHSQPILQNL 1172
>Q59E91_HUMAN (tr|Q59E91) DNA-directed RNA polymerase (Fragment) OS=Homo sapiens
PE=2 SV=1
Length = 1072
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/637 (42%), Positives = 377/637 (59%), Gaps = 33/637 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW ++ ++G L E+L+Q + P S S + P H SFR V
Sbjct: 407 QPWPLPVQMELGKLLAEMLVQATQM-PCSLDKPHRSSRLVPVLYHVYSFRNV-------- 457
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
++ GI++ P ++ L+++A+ + +PML PP+ WT G L P+ +MRT
Sbjct: 458 QQIGILKPHPAYVQLLEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVE 517
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q +E ++ P L +AL LG+ WRVN +VL +V +++ + G +L
Sbjct: 518 GATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPP 577
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P + A+ RE +S R + +L++A+ ++D F
Sbjct: 578 SEAPQPPEAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDR-VF 636
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSDV R +LEFA GRPLG G WLKIHL NL G
Sbjct: 637 WLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 695
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ L R++F E +DDI DSAD+PL GR+WW+ AE+P+Q LA C+ + A+R+S P +
Sbjct: 696 REPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDPAAY 755
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL + P DVYSG+AA+V R DAQ+
Sbjct: 756 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQR 815
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 816 GMRV------AQVLEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VW 868
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I+ V W TPLG+PV+QPYR
Sbjct: 869 EASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDS 928
Query: 617 R-HIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ I +Q +T D K ++Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 929 KVKQIGGGIQSITYTHNGDISRKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 988
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD YWTHA DV MN++ R +FV L+ PIL++L
Sbjct: 989 VSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDL 1025
>Q4G0F4_HUMAN (tr|Q4G0F4) DNA-directed RNA polymerase OS=Homo sapiens GN=POLRMT
PE=2 SV=1
Length = 1230
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/637 (42%), Positives = 377/637 (59%), Gaps = 33/637 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW ++ ++G L E+L+Q + P S S + P H SFR V
Sbjct: 565 QPWPLPVQMELGKLLAEMLVQATQM-PCSLDKPHHSSRLVPVLYHVYSFRNV-------- 615
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
++ GI++ P ++ L+++A+ + +PML PP+ WT G L P+ +MRT
Sbjct: 616 QQIGILKPHPAYVQLLEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVE 675
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q +E ++ P L +AL LG+ WRVN +VL +V +++ + G +L
Sbjct: 676 GATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPP 735
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P + A+ RE +S R + +L++A+ ++D F
Sbjct: 736 SEAPQPPEAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDR-VF 794
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSDV R +LEFA GRPLG G WLKIHL NL G
Sbjct: 795 WLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 853
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ L R++F E +DDI DSAD+PL GR+WW+ AE+P+Q LA C+ + A+R+S P +
Sbjct: 854 REPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDPAAY 913
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL + P DVYSG+AA+V R DAQ+
Sbjct: 914 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQR 973
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 974 GMRV------AQVLEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VW 1026
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I+ V W TPLG+PV+QPYR
Sbjct: 1027 EASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDS 1086
Query: 617 R-HIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ I +Q +T D K ++Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1087 KVKQIGGGIQSITYTHNGDISRKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 1146
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD YWTHA DV MN++ R +FV L+ PIL++L
Sbjct: 1147 VSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDL 1183
>B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassiosira pseudonana
GN=rpoT PE=3 SV=1
Length = 1217
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/682 (39%), Positives = 390/682 (57%), Gaps = 71/682 (10%)
Query: 86 DTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTG 145
D W PV++ K+G+ L+ LL++ + SP+ PAF +S KKTG
Sbjct: 524 DFAEWDPVLKVKLGAALIRLLLEHTSFS----KRRGSSPE--PAFFYS-------RKKTG 570
Query: 146 R-KF-GIIECDPLILK-----GLDRSAKNMVIPYM------PMLVPPVNWTGYDKGGHLF 192
KF G + P +LK L + + YM PM+VPP +W D GG+
Sbjct: 571 EMKFNGFVTIHPELLKIAMKEELSHDSSFISPRYMQNTRCQPMVVPPKDWKAVDDGGYET 630
Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
+ + MRT K Q++A++ A L VFE L+ LG W++N+ VL + W G
Sbjct: 631 IKTEFMRTRHCKTQKDAIRHA---DLTQVFEGLNVLGRIPWKINQNVLDAACKCWDDGIA 687
Query: 253 LADLVDRDD---VPLPEEPD-------TDDEAQIXXXXXXXXXXXXENRERYSQ------ 296
L D+ +D+ PLP D DDE ++ R+ Q
Sbjct: 688 LGDIPSQDNHQVPPLPTPLDYRDFNLLDDDEKKVQVDAFRIYKDAITKHFRFKQKNMDLH 747
Query: 297 --RCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRP 354
RC LKL A+K +D E ++P+NVDFRGRAYP+ PHL+ +GSD+CR +L FA +P
Sbjct: 748 SLRCSAMLKLNQAKKFRDFEEIFFPYNVDFRGRAYPVPPHLSIVGSDLCRALLMFAHPKP 807
Query: 355 LGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDP 414
LG +G WLK+HLANL G +K+S +GR F + +++ I + D P G WW+ +DP
Sbjct: 808 LGPNGLYWLKVHLANL--AGANKMSFDGRAQFADDNMESIRAAVDNPFGGNDWWMGFDDP 865
Query: 415 FQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 474
FQ LA C + +A+ S P ++ +PVH DGSCNGLQHYAALGRDK+G AVNL ++
Sbjct: 866 FQGLATCHEIVKAIDSGDPANYMCSLPVHMDGSCNGLQHYAALGRDKVGGKAVNLCIADE 925
Query: 475 PADVYSGIAARVLDIMRSDAQK--------------DPAIFPDALHARTLVNQVDRKLVK 520
P DVY G+ V+ + DAQ+ + + AR + +DR +VK
Sbjct: 926 PQDVYIGVMHEVIRRVAEDAQEMLPFDETKADLTKAEKELMKKIKSARLVNGLIDRGVVK 985
Query: 521 QTVMTSVYGVTYIGAREQIKRRLKER------DVFSDDTKLFGASCYAAKVTLTALEEMF 574
+TVMTSVYGVTYIGAR QI +++E+ D+ + ++ A Y A +T+ + ++F
Sbjct: 986 RTVMTSVYGVTYIGARNQISEKIEEKLEDKGYDIDEMEAEINMACGYLASLTMEVMGQLF 1045
Query: 575 QGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETD 634
GAR MNWL CA++IA + QPV + +P+G+PVVQPYR+ + T LQ + L ++D
Sbjct: 1046 TGARQTMNWLTACARLIAQQGQPVAFVSPVGVPVVQPYRQKRPFTVVTLLQNVVLSNDSD 1105
Query: 635 KVMVKRQR--TAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRI 692
+ + RQR +AFPPN+VHSLD SHM++TA+ ++ GL F+ VHDSYWTH CDV++MN I
Sbjct: 1106 VLPLHRQRQVSAFPPNYVHSLDSSHMLLTAIEMQKRGLHFSAVHDSYWTHPCDVEEMNDI 1165
Query: 693 LRGKFVELYETPILENLLEGFQ 714
LR F++LY P+LE+L + ++
Sbjct: 1166 LRECFIDLYSQPLLEDLKDSWE 1187
>I2CX83_MACMU (tr|I2CX83) DNA-directed RNA polymerase OS=Macaca mulatta GN=POLRMT
PE=2 SV=1
Length = 1228
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/637 (41%), Positives = 377/637 (59%), Gaps = 33/637 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW ++ ++G +L E+L+Q + P S GS + P H SFR V
Sbjct: 558 QPWPLPVQMELGKQLAEMLVQATRM-PSSLDNRHGSSRLVPVLYHVYSFRNV-------- 608
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
++ GI++ P ++ L+ +A+ + +PML PP+ WT G L P+ +MRT
Sbjct: 609 QQIGILKPHPAYVQLLETAAEPTLTFEAVDVPMLCPPLPWTSPHTGAFLLSPTKLMRTVE 668
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q +E ++ P L +AL LG+ WRVN +VL +V +++ + G +L
Sbjct: 669 GATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPKLGVPAPA 728
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P + A+ RE +S R + +L++A+ ++ F
Sbjct: 729 SEAPQPAEAHVPQSAAPARKAELRRELARCQKVAREMHSLRAEALYRLSLAQHLRGR-VF 787
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSDV R +LEFA GRPLG G WLKIHL NL G
Sbjct: 788 WLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNL-TGFKK 846
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ L R++F E +DDI DSAD+P+ GR+WW+ AE+P+Q LA C+ + A+R S P +
Sbjct: 847 REPLRKRLAFAEEVMDDILDSADQPMTGRKWWMGAEEPWQTLACCMEVANAVRCSDPAAY 906
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL + P DVYSG+AA+V R DAQ+
Sbjct: 907 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQR 966
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 967 GTRV------AQMLEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELTDFPQEF-VW 1019
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I+ V W TPLG+P++QPYR
Sbjct: 1020 EASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMGSVVEWVTPLGIPIIQPYRLEH 1079
Query: 617 R-HIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ ++ +Q +T D K ++Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1080 KVKQVRGGIQSITYIHNGDISQKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 1139
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD YWTHA DV MN++ R +FV L+ PILE+L
Sbjct: 1140 VSVHDCYWTHAADVAVMNQVCREQFVRLHSEPILEDL 1176
>K6ZBI1_PANTR (tr|K6ZBI1) DNA-directed RNA polymerase OS=Pan troglodytes GN=POLRMT
PE=2 SV=1
Length = 1230
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/637 (42%), Positives = 377/637 (59%), Gaps = 33/637 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW ++ ++G L E+L+Q + P S S + P H SFR V
Sbjct: 565 QPWPLPVQMELGKLLAEMLVQATQM-PCSLDKPHRSSRLVPVLYHVYSFRNV-------- 615
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
++ GI++ P ++ L+++A+ + +PML PP+ WT G L P+ +MRT
Sbjct: 616 QQIGILKPHPAYVQLLEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVE 675
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q +E ++ P L +AL LG+ WRVN +VL +V +++ + G +L
Sbjct: 676 GATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPP 735
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P + A+ RE +S R + +L++A+ ++D F
Sbjct: 736 SEAPQPPEAHLPHSAAPARKAELRREVVHCQKVAREMHSLRAEALYRLSLAQHLRDR-VF 794
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSDV R +LEFA GRPLG G WLKIHL NL G
Sbjct: 795 WLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 853
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ L R++F E +DDI DSAD+PL GR+WW+ AE+P+Q LA C+ + A+R+S P +
Sbjct: 854 REPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDPAAY 913
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL + P DVYSG+AA+V R DAQ+
Sbjct: 914 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQR 973
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 974 GMRV------AQVLEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VW 1026
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I+ V W TPLG+PV+QPYR
Sbjct: 1027 EASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDS 1086
Query: 617 R-HIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ I +Q +T D K ++Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1087 KVKQIGGGIQSITYTHNGDISRKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 1146
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD YWTHA DV MN++ R +FV L+ PIL++L
Sbjct: 1147 VSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDL 1183
>K7EKS3_HUMAN (tr|K7EKS3) DNA-directed RNA polymerase OS=Homo sapiens GN=POLRMT
PE=3 SV=1
Length = 1245
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/637 (42%), Positives = 377/637 (59%), Gaps = 33/637 (5%)
Query: 88 KPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVH--SFRTVTKEAKKTG 145
+PW ++ ++G L E+L+Q + P S S + P H SFR V
Sbjct: 580 QPWPLPVQMELGKLLAEMLVQATQM-PCSLDKPHRSSRLVPVLYHVYSFRNV-------- 630
Query: 146 RKFGIIECDPLILKGLDRSAKNMVIPY---MPMLVPPVNWTGYDKGGHLFLPSYVMRT-H 201
++ GI++ P ++ L+++A+ + +PML PP+ WT G L P+ +MRT
Sbjct: 631 QQIGILKPHPAYVQLLEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVE 690
Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGG--RLADLVDR 259
G Q +E ++ P L +AL LG+ WRVN +VL +V +++ + G +L
Sbjct: 691 GATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPP 750
Query: 260 DDVPLPEE---PDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAF 316
+ P P E P + A+ RE +S R + +L++A+ ++D F
Sbjct: 751 SEAPQPPEAHLPHSAAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDR-VF 809
Query: 317 YYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVD 376
+ PHN+DFRGR YP PH NHLGSDV R +LEFA GRPLG G WLKIHL NL G
Sbjct: 810 WLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNL-TGLKK 868
Query: 377 KLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETF 436
+ L R++F E +DDI DSAD+PL GR+WW+ AE+P+Q LA C+ + A+R+S P +
Sbjct: 869 REPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDPAAY 928
Query: 437 ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQK 496
+SH+PVHQDGSCNGLQHYAALGRD +GAA+VNL + P DVYSG+AA+V R DAQ+
Sbjct: 929 VSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQR 988
Query: 497 DPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLF 556
+ A+ L + RK+VKQTVMT VYGVT G R QI++RL+E F + ++
Sbjct: 989 GMRV------AQVLEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEF-VW 1041
Query: 557 GASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLG 616
AS Y + +L+EMF G R+I +WL E A++I+ V W TPLG+PV+QPYR
Sbjct: 1042 EASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDS 1101
Query: 617 R-HIIKTSLQMLTLQRETD---KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
+ I +Q +T D K ++Q+ FPPNF+HSLD SHMM+TA+ C + GL F
Sbjct: 1102 KVKQIGGGIQSITYTHNGDISRKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTF 1161
Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
VHD YWTHA DV MN++ R +FV L+ PIL++L
Sbjct: 1162 VSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDL 1198
>C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
GN=HCBG_05044 PE=3 SV=1
Length = 1397
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/693 (39%), Positives = 389/693 (56%), Gaps = 62/693 (8%)
Query: 70 KKQKIAAVRGIMKDQNDTKP--WGPVMRTKVGSRLVELLMQTAYIQPPS-DQIVDGSPDI 126
+K ++ R I + + +P W PV++ K+G+ L +L+ TA + P+ D +
Sbjct: 524 RKAQVQWRRIIARFEQSQRPVDWSPVVQAKIGACLASMLLSTATVPVPTKDPKTNHQKQT 583
Query: 127 RPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSA-KNMVIPYMPMLVPPVNWTGY 185
A +FR V + + G + G + + I++ L R ++ ++PM+ PP WT
Sbjct: 584 DQA---AFRRVYQLER--GFRVGYVHANDYIVEKLRREPLGELLAKHLPMVCPPRPWTSA 638
Query: 186 DKGGHLFLPSYVMRTH--GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVV 243
GG L PS VMR + Q A + L+ VF L LG T W++N+ VL+V+
Sbjct: 639 RGGGFLEYPSTVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVM 698
Query: 244 DRIWASGGRLADLVDRD-DVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIEL 302
W SG +A+L + ++ PE+PDTDD + +SQRC
Sbjct: 699 LEAWNSGEEIANLAPENPNIIEPEKPDTDDRDILKDYYRAKMHATNARTGYHSQRCFQNF 758
Query: 303 KLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQW 362
+L +AR ++E FY PHN+DFRGRAYPM P+ N +G+D CRG+L F+ GR LG SG +W
Sbjct: 759 QLEIARAYRNE-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRW 817
Query: 363 LKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCI 422
LKIHLAN++ G DK S + R F H++DI DSA L+G+RWWL+A DPFQCLA CI
Sbjct: 818 LKIHLANVF--GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACI 875
Query: 423 TLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 482
LT A+ P F+SH+PVHQDGSCNGLQHYAALG D +GA VNL ++P+D+Y+G+
Sbjct: 876 ELTNAMALEDPTKFVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGV 935
Query: 483 AARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 542
A V ++ DA K A+ L +++ RK+VKQTVMT+VYGVT++GA Q++++
Sbjct: 936 AEHVKQSIQKDAAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQ 989
Query: 543 LKERDVFSDDTKLFG-ASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQP---- 597
L + + + G + Y A+ AL MF GA I WLG+CA I+ P
Sbjct: 990 LVDHYPDLLHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCANRISQSLSPEQIE 1049
Query: 598 ----------------------------------VRWTTPLGLPVVQPYRKLGRHIIKTS 623
V WTTPL LPV QPYR + +
Sbjct: 1050 ALSDERNLKVVGRFQGAKKLAKNIKDPKSHFKSTVVWTTPLKLPVAQPYRDAACVKVFSD 1109
Query: 624 LQMLTLQ--RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWT 681
LQ L+++ + +D V ++Q AFPPNFVHSLD +HM ++AV C + GL+F+ VHDS+WT
Sbjct: 1110 LQQLSIRNPQASDVVNKRKQLQAFPPNFVHSLDATHMFLSAVKCDELGLSFSAVHDSFWT 1169
Query: 682 HACDVDDMNRILRGKFVELYETPILENLLEGFQ 714
HA DVD MNR+LR FV ++ I++ L F+
Sbjct: 1170 HAADVDTMNRVLRDAFVRMHSEDIIQRLASEFK 1202