Miyakogusa Predicted Gene

Lj1g3v2626080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2626080.1 Non Chatacterized Hit- tr|I3SZH1|I3SZH1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.15,0.000000000000003,FBOX,F-box domain, cyclin-like;
F-box,F-box domain, cyclin-like; seg,NULL; no description,NULL;
F-bo,NODE_67840_length_169_cov_15.147929.path1.1
         (53 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SZH1_LOTJA (tr|I3SZH1) Uncharacterized protein OS=Lotus japoni...    85   9e-15

>I3SZH1_LOTJA (tr|I3SZH1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 160

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 47/54 (87%), Gaps = 1/54 (1%)

Query: 1  MTMQXXXXXX-STAENPSLSSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 53
          MTMQ       STAENPSLSSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV
Sbjct: 1  MTMQRRRRRRRSTAENPSLSSVLLPDELIEAILVRLPVSSLLRFKSVCKSWLSV 54