Miyakogusa Predicted Gene
- Lj1g3v2432910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2432910.1 tr|B9IGN9|B9IGN9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_778006 PE=4
SV=1,45.99,1e-17,seg,NULL,CUFF.29032.1
(365 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7MTR3_SOYBN (tr|K7MTR3) Uncharacterized protein OS=Glycine max ... 79 3e-12
M5WJ15_PRUPE (tr|M5WJ15) Uncharacterized protein OS=Prunus persi... 67 1e-08
M4CLM3_BRARP (tr|M4CLM3) Uncharacterized protein OS=Brassica rap... 64 8e-08
G7KW31_MEDTR (tr|G7KW31) Class E vacuolar protein-sorting machin... 63 2e-07
D7LLJ5_ARALL (tr|D7LLJ5) Predicted protein OS=Arabidopsis lyrata... 63 2e-07
B9T6F7_RICCO (tr|B9T6F7) Protein transporter, putative OS=Ricinu... 62 2e-07
R0FUU3_9BRAS (tr|R0FUU3) Uncharacterized protein OS=Capsella rub... 61 6e-07
K7LGI6_SOYBN (tr|K7LGI6) Uncharacterized protein OS=Glycine max ... 60 1e-06
F6GXZ1_VITVI (tr|F6GXZ1) Putative uncharacterized protein OS=Vit... 60 1e-06
O80910_ARATH (tr|O80910) At2g38410 OS=Arabidopsis thaliana GN=AT... 59 3e-06
B9HD95_POPTR (tr|B9HD95) Predicted protein OS=Populus trichocarp... 57 8e-06
>K7MTR3_SOYBN (tr|K7MTR3) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 740
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 274 NYQNHLSSTNALSTPQANTP--YTSAVRGDPV-------ASSGQSNPPNATGQRPFVPSY 324
NYQNH +TN +S P ANT Y+SA PV + P +ATGQ+PFVPSY
Sbjct: 641 NYQNHSPATNMISAPPANTATSYSSAPGVRPVQHNNSFHSRGTGGTPASATGQKPFVPSY 700
Query: 325 RLFEDLNVFGNTDGRAKV 342
RLFEDLNVFGNTDGR K+
Sbjct: 701 RLFEDLNVFGNTDGRVKM 718
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 16/82 (19%)
Query: 22 TSKDQDIIDXXXXXXXXXXXXXQ--------------QTTYTPSASSQGMHQIPAPSGTG 67
T+KDQDIID QTTY PSASSQGMHQ PAPS
Sbjct: 400 TTKDQDIIDLLSITLSMSPSPQTSYAPPPQTSYAPPPQTTYAPSASSQGMHQTPAPS--R 457
Query: 68 TEGYSYAPQTYPGSLPFDSYVV 89
TEG+SYA QTYPG+L ++SYVV
Sbjct: 458 TEGFSYASQTYPGNLSYNSYVV 479
>M5WJ15_PRUPE (tr|M5WJ15) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa003104mg PE=4 SV=1
Length = 603
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 23/92 (25%)
Query: 274 NYQNHLSSTNALSTPQAN--TPYTSAVRGDPV---------------------ASSGQSN 310
N QNHLS+ N STP+AN T Y A P+ G +
Sbjct: 490 NNQNHLSANNMFSTPRANATTSYMPAQGARPLQHFNSFPARGINGSDNNGGFPVIPGPRS 549
Query: 311 PPNATGQRPFVPSYRLFEDLNVFGNTDGRAKV 342
P A GQ+PFVPSYRLFEDLNVFGN DG+ K+
Sbjct: 550 PAPAAGQKPFVPSYRLFEDLNVFGNADGKFKM 581
>M4CLM3_BRARP (tr|M4CLM3) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra005110 PE=4 SV=1
Length = 720
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 16/76 (21%)
Query: 280 SSTNALSTPQANTPY----TSAVR------------GDPVASSGQSNPPNATGQRPFVPS 323
+S NA TP+AN TSA R GDP A+S SNP + GQ+PFVPS
Sbjct: 620 TSANAYYTPRANATASYTETSAGRTLQQSNSFPARGGDPQATSAASNPGVSGGQKPFVPS 679
Query: 324 YRLFEDLNVFGNTDGR 339
YRLFEDL+VFG+T+G+
Sbjct: 680 YRLFEDLDVFGSTEGK 695
>G7KW31_MEDTR (tr|G7KW31) Class E vacuolar protein-sorting machinery protein HSE1
OS=Medicago truncatula GN=MTR_7g072310 PE=4 SV=1
Length = 731
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 11/76 (14%)
Query: 274 NYQNHLSSTNALSTPQANTPYTS-----AVR----GDPVASSGQSNPPNATGQRPFVPSY 324
NYQ+H S NA+ST Q NT S VR +S G +GQRPFVPSY
Sbjct: 637 NYQSH--SQNAISTSQGNTATASYPPALGVRPSQHNQSFSSPGVDPRGGNSGQRPFVPSY 694
Query: 325 RLFEDLNVFGNTDGRA 340
+LFEDLNVFGNTDGR
Sbjct: 695 KLFEDLNVFGNTDGRV 710
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 22 TSKDQDIIDXXXXXXXXXXXXXQQTTYTPS-ASSQG--MHQIPAPSGTGTEGYSYAPQTY 78
TSKDQDIID TTY PS ASSQG HQIP PS T E YSYAPQ Y
Sbjct: 402 TSKDQDIIDLLSITLSLTPSSPPTTTYAPSSASSQGGMHHQIPTPSST--ESYSYAPQAY 459
Query: 79 PGSLPFDSYVV 89
PG+ P++SYV
Sbjct: 460 PGNSPYNSYVA 470
>D7LLJ5_ARALL (tr|D7LLJ5) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_669685 PE=4 SV=1
Length = 671
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 300 GDPVASSGQSNPPNATGQRPFVPSYRLFEDLNVFGNTDGRAK 341
GDP A+S SNP + GQ+PFVPSYRLFEDL+VFG+ DG+ K
Sbjct: 603 GDPQATSTASNPGVSVGQKPFVPSYRLFEDLDVFGSADGKNK 644
>B9T6F7_RICCO (tr|B9T6F7) Protein transporter, putative OS=Ricinus communis
GN=RCOM_0665150 PE=4 SV=1
Length = 734
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 5/48 (10%)
Query: 297 AVRGDPVASSGQSN--PPNATGQRPFVPSYRLFEDLNVFGNTDGRAKV 342
A+ G+P ASSG N PP GQ+PF+PSYRLFEDLNV GN DGR K+
Sbjct: 669 AMNGNPWASSGPRNTTPP---GQKPFIPSYRLFEDLNVLGNADGRFKM 713
>R0FUU3_9BRAS (tr|R0FUU3) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022769mg PE=4 SV=1
Length = 689
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 280 SSTNALSTPQANTPYTSAVRGDPVASSGQSNPPNATGQRPFVPSYRLFEDLNVFGNTDGR 339
S+ + S Q+N+ T A GDP A+ SNP +TGQ+PFVPSYRLFEDL+VFG+ DG+
Sbjct: 602 SALSGRSLQQSNSFPTRA--GDPQANLTSSNPGVSTGQKPFVPSYRLFEDLDVFGSADGK 659
>K7LGI6_SOYBN (tr|K7LGI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 506
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 311 PPNATGQRPFVPSYRLFEDLNVFGNTDGRAKV 342
P +ATGQ+ FVPSYRLFEDLNVFGNTD R K+
Sbjct: 453 PASATGQKLFVPSYRLFEDLNVFGNTDARVKM 484
>F6GXZ1_VITVI (tr|F6GXZ1) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_08s0058g00880 PE=4 SV=1
Length = 625
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 307 GQSNPPNATGQRPFVPSYRLFEDLNVFGNTDGRAKV 342
G NP A+G +PF+PSYRLFEDLNV GNTDGR K+
Sbjct: 569 GPRNPVPASGNKPFIPSYRLFEDLNVLGNTDGRLKM 604
>O80910_ARATH (tr|O80910) At2g38410 OS=Arabidopsis thaliana GN=AT2G38410 PE=2
SV=1
Length = 671
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 300 GDPVASSGQSNPPNATGQRPFVPSYRLFEDLNVFGNTDGR 339
GDP A+S SN + GQ+PFVPSYRLFEDL+VFG+ DG+
Sbjct: 602 GDPQATSTASNSGVSVGQKPFVPSYRLFEDLDVFGSADGK 641
>B9HD95_POPTR (tr|B9HD95) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_867133 PE=4 SV=1
Length = 635
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 26/94 (27%)
Query: 274 NYQNHLSSTNAL-STPQAN-----TPYTSA------------------VRGDPVASSGQS 309
N QNH+S+TN + S+P+AN TP +A + GDP SS S
Sbjct: 534 NNQNHMSATNNMFSSPRANKTASYTPVQAARPVQQFNSFPTKAGNGSTMNGDPWMSS-TS 592
Query: 310 NPPNATGQR-PFVPSYRLFEDLNVFGNTDGRAKV 342
P A GQ+ FVP YRLFEDLNV GN DGR K+
Sbjct: 593 RIPAAPGQKQSFVPPYRLFEDLNVLGNADGRYKM 626