Miyakogusa Predicted Gene

Lj1g3v2185240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2185240.1 tr|B9GQS6|B9GQS6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_550861 PE=4
SV=1,45.56,1e-16,seg,NULL,CUFF.28704.1
         (248 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1JT24_SOYBN (tr|I1JT24) Uncharacterized protein OS=Glycine max ...    72   2e-10
F6H1M4_VITVI (tr|F6H1M4) Putative uncharacterized protein OS=Vit...    63   8e-08

>I1JT24_SOYBN (tr|I1JT24) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 214

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 14/112 (12%)

Query: 129 NGTKNTSLTAKKSKPTKREEANKRSSAAQSLISASENRWGPDPKDLPKHLPVVLTSKEEP 188
           N +++ SLT KKSKPTKREEA KRS      ++ S+NRWGPDPKDLPK   VVL      
Sbjct: 109 NRSRDMSLTPKKSKPTKREEAKKRS------VTQSDNRWGPDPKDLPK---VVLGMGNNH 159

Query: 189 VDMFLGSSGFNXXXXXXXXXXXXXXXXXXXXXCNAEASAAGSVVDDDGATNN 240
            D+  G+  FN                     CNAE +A G    DDGATNN
Sbjct: 160 HDVVSGAV-FN-LAPPPSSLPLPKFSLRSKLGCNAETAAGGV---DDGATNN 206


>F6H1M4_VITVI (tr|F6H1M4) Putative uncharacterized protein OS=Vitis vinifera
           GN=VIT_18s0001g14640 PE=4 SV=1
          Length = 221

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 15/124 (12%)

Query: 132 KNTSLTAKKSKPT----KREEANKRSSAAQSLISASENRWGPDPKDLPKH-LPVVLTSKE 186
           ++ SLT KKSKP+    K+E++   + +  S+++AS NR GPDPKDLPK  +  +LTS  
Sbjct: 104 RDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRILTSGN 163

Query: 187 ---EPVDMFLGSSGFNXXXXXXXXXXXXXXXXXXXXXCNAEASAAGSVVDDDGATNNLRR 243
              E +D F GS                         CNAEA+       D GATNNLRR
Sbjct: 164 IVIEDLDKFSGS--VFTLSPPPSSLPLPKFSLRPKLSCNAEAAGI-----DAGATNNLRR 216

Query: 244 LLRL 247
           LLRL
Sbjct: 217 LLRL 220