Miyakogusa Predicted Gene
- Lj1g3v1815490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1815490.1 tr|G7J9U6|G7J9U6_MEDTR DNA-directed RNA
polymerase OS=Medicago truncatula GN=MTR_3g105990 PE=3 SV=1,69.31,0,no
description,NULL; beta and beta-prime subunits of DNA dependent
RNA-polymerase,NULL; seg,NULL;
RN,NODE_40924_length_1753_cov_101.549911.path1.1
(593 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7KIE2_SOYBN (tr|K7KIE2) DNA-directed RNA polymerase OS=Glycine ... 891 0.0
I1K8M4_SOYBN (tr|I1K8M4) DNA-directed RNA polymerase OS=Glycine ... 887 0.0
G7J9U6_MEDTR (tr|G7J9U6) DNA-directed RNA polymerase OS=Medicago... 867 0.0
M5XMB4_PRUPE (tr|M5XMB4) Uncharacterized protein OS=Prunus persi... 756 0.0
B9RNV9_RICCO (tr|B9RNV9) DNA-directed RNA polymerase OS=Ricinus ... 738 0.0
B9IL57_POPTR (tr|B9IL57) DNA-directed RNA polymerase OS=Populus ... 733 0.0
M1D1M7_SOLTU (tr|M1D1M7) DNA-directed RNA polymerase OS=Solanum ... 694 0.0
K4BJV1_SOLLC (tr|K4BJV1) DNA-directed RNA polymerase OS=Solanum ... 693 0.0
Q17U53_SOLBU (tr|Q17U53) DNA-directed RNA polymerase, putative O... 691 0.0
K4CMW1_SOLLC (tr|K4CMW1) DNA-directed RNA polymerase OS=Solanum ... 689 0.0
Q1L6V6_SOLLC (tr|Q1L6V6) DNA-directed RNA polymerase (Fragment) ... 689 0.0
F6H335_VITVI (tr|F6H335) DNA-directed RNA polymerase OS=Vitis vi... 687 0.0
D7L7Z5_ARALL (tr|D7L7Z5) DNA-directed RNA polymerase OS=Arabidop... 666 0.0
M4E0I2_BRARP (tr|M4E0I2) DNA-directed RNA polymerase OS=Brassica... 659 0.0
R0GBC5_9BRAS (tr|R0GBC5) Uncharacterized protein OS=Capsella rub... 652 0.0
M0TR54_MUSAM (tr|M0TR54) DNA-directed RNA polymerase OS=Musa acu... 595 e-167
I1IKY3_BRADI (tr|I1IKY3) DNA-directed RNA polymerase OS=Brachypo... 588 e-165
M7ZF38_TRIUA (tr|M7ZF38) DNA-directed RNA polymerase D subunit 2... 586 e-164
I1HCX0_BRADI (tr|I1HCX0) DNA-directed RNA polymerase OS=Brachypo... 586 e-164
K3Y4R3_SETIT (tr|K3Y4R3) DNA-directed RNA polymerase OS=Setaria ... 585 e-164
J3M1V4_ORYBR (tr|J3M1V4) DNA-directed RNA polymerase OS=Oryza br... 585 e-164
B8AV78_ORYSI (tr|B8AV78) DNA-directed RNA polymerase OS=Oryza sa... 583 e-164
B9FCT0_ORYSJ (tr|B9FCT0) DNA-directed RNA polymerase OS=Oryza sa... 583 e-164
Q0J9N2_ORYSJ (tr|Q0J9N2) DNA-directed RNA polymerase (Fragment) ... 583 e-164
Q7F9D6_ORYSJ (tr|Q7F9D6) DNA-directed RNA polymerase OS=Oryza sa... 583 e-164
K7TP19_MAIZE (tr|K7TP19) DNA-directed RNA polymerase OS=Zea mays... 577 e-162
C5Y8Y9_SORBI (tr|C5Y8Y9) DNA-directed RNA polymerase OS=Sorghum ... 574 e-161
C5WRS0_SORBI (tr|C5WRS0) DNA-directed RNA polymerase OS=Sorghum ... 573 e-161
M8BTF6_AEGTA (tr|M8BTF6) DNA-directed RNA polymerase II subunit ... 570 e-160
D2WKI1_MAIZE (tr|D2WKI1) DNA-directed RNA polymerase OS=Zea mays... 570 e-160
Q7XTQ7_ORYSJ (tr|Q7XTQ7) DNA-directed RNA polymerase OS=Oryza sa... 569 e-159
D2WKH8_MAIZE (tr|D2WKH8) DNA-directed RNA polymerase OS=Zea mays... 569 e-159
Q259Y6_ORYSA (tr|Q259Y6) DNA-directed RNA polymerase OS=Oryza sa... 568 e-159
I1J2F6_BRADI (tr|I1J2F6) DNA-directed RNA polymerase OS=Brachypo... 568 e-159
D2WKI0_MAIZE (tr|D2WKI0) DNA-directed RNA polymerase OS=Zea mays... 566 e-159
Q07DU9_MAIZE (tr|Q07DU9) DNA-directed RNA polymerase (Fragment) ... 560 e-157
I1I174_BRADI (tr|I1I174) DNA-directed RNA polymerase OS=Brachypo... 558 e-156
Q1L6W5_RHOMC (tr|Q1L6W5) DNA-directed RNA polymerase (Fragment) ... 556 e-155
M7Z8U6_TRIUA (tr|M7Z8U6) DNA-directed RNA polymerase D subunit 2... 542 e-151
M1D1M8_SOLTU (tr|M1D1M8) DNA-directed RNA polymerase OS=Solanum ... 540 e-151
R7W6E3_AEGTA (tr|R7W6E3) DNA-directed RNA polymerase II subunit ... 536 e-149
K3YFW0_SETIT (tr|K3YFW0) DNA-directed RNA polymerase OS=Setaria ... 528 e-147
C5YHJ3_SORBI (tr|C5YHJ3) DNA-directed RNA polymerase OS=Sorghum ... 527 e-147
K7TLH8_MAIZE (tr|K7TLH8) DNA-directed RNA polymerase OS=Zea mays... 523 e-146
A3BQ32_ORYSJ (tr|A3BQ32) DNA-directed RNA polymerase OS=Oryza sa... 514 e-143
J3MQS1_ORYBR (tr|J3MQS1) DNA-directed RNA polymerase OS=Oryza br... 510 e-142
Q6YYK5_ORYSJ (tr|Q6YYK5) DNA-directed RNA polymerase OS=Oryza sa... 478 e-132
A2YRP1_ORYSI (tr|A2YRP1) DNA-directed RNA polymerase OS=Oryza sa... 446 e-122
D7L3H4_ARALL (tr|D7L3H4) Putative uncharacterized protein OS=Ara... 340 7e-91
M0VYL2_HORVD (tr|M0VYL2) DNA-directed RNA polymerase OS=Hordeum ... 331 6e-88
Q1L6W3_ANTMA (tr|Q1L6W3) DNA-directed RNA polymerase (Fragment) ... 300 8e-79
A9TK27_PHYPA (tr|A9TK27) DNA-directed RNA polymerase OS=Physcomi... 240 1e-60
C8VK81_EMENI (tr|C8VK81) DNA-directed RNA polymerase OS=Emericel... 222 4e-55
A9CSV4_ENTBH (tr|A9CSV4) DNA-directed RNA polymerase OS=Enterocy... 221 7e-55
R9PNZ8_9BASI (tr|R9PNZ8) Uncharacterized protein OS=Pseudozyma h... 221 8e-55
I2FV89_USTH4 (tr|I2FV89) DNA-directed RNA polymerase OS=Ustilago... 220 1e-54
M9MEX9_9BASI (tr|M9MEX9) RNA polymerase II, second largest subun... 218 7e-54
B3L0J5_PLAKH (tr|B3L0J5) DNA-directed RNA polymerase OS=Plasmodi... 216 2e-53
E6ZNL3_SPORE (tr|E6ZNL3) DNA-directed RNA polymerase OS=Sporisor... 216 2e-53
Q0CWW4_ASPTN (tr|Q0CWW4) DNA-directed RNA polymerase OS=Aspergil... 213 1e-52
H0EN05_GLAL7 (tr|H0EN05) DNA-directed RNA polymerase OS=Glarea l... 213 2e-52
Q4WAN4_ASPFU (tr|Q4WAN4) DNA-directed RNA polymerase OS=Neosarto... 213 2e-52
B0YC08_ASPFC (tr|B0YC08) DNA-directed RNA polymerase OS=Neosarto... 213 2e-52
A5KBW7_PLAVS (tr|A5KBW7) DNA-directed RNA polymerase OS=Plasmodi... 212 4e-52
A1D971_NEOFI (tr|A1D971) DNA-directed RNA polymerase OS=Neosarto... 211 6e-52
G3XUX0_ASPNA (tr|G3XUX0) DNA-directed RNA polymerase OS=Aspergil... 211 9e-52
A2QYC2_ASPNC (tr|A2QYC2) DNA-directed RNA polymerase OS=Aspergil... 211 9e-52
A7E6G0_SCLS1 (tr|A7E6G0) DNA-directed RNA polymerase OS=Scleroti... 211 1e-51
G7XW42_ASPKW (tr|G7XW42) DNA-directed RNA polymerase OS=Aspergil... 210 1e-51
A1CG49_ASPCL (tr|A1CG49) DNA-directed RNA polymerase OS=Aspergil... 209 2e-51
M5BX33_9HOMO (tr|M5BX33) DNA-directed RNA polymerase II subunit ... 209 2e-51
A8PVJ8_MALGO (tr|A8PVJ8) DNA-directed RNA polymerase OS=Malassez... 209 2e-51
C5JQR0_AJEDS (tr|C5JQR0) DNA-directed RNA polymerase OS=Ajellomy... 209 3e-51
F2TTJ0_AJEDA (tr|F2TTJ0) DNA-directed RNA polymerase OS=Ajellomy... 209 3e-51
C5GBN2_AJEDR (tr|C5GBN2) DNA-directed RNA polymerase OS=Ajellomy... 209 3e-51
Q2U279_ASPOR (tr|Q2U279) DNA-directed RNA polymerase OS=Aspergil... 208 4e-51
I8IG63_ASPO3 (tr|I8IG63) DNA-directed RNA polymerase OS=Aspergil... 208 4e-51
B8NK59_ASPFN (tr|B8NK59) DNA-directed RNA polymerase OS=Aspergil... 208 4e-51
C4V8X8_NOSCE (tr|C4V8X8) DNA-directed RNA polymerase OS=Nosema c... 208 4e-51
N1JAL0_ERYGR (tr|N1JAL0) DNA-directed RNA polymerase II complex ... 208 5e-51
A6R483_AJECN (tr|A6R483) DNA-directed RNA polymerase OS=Ajellomy... 208 5e-51
M5E5X9_MALSM (tr|M5E5X9) Genomic scaffold, msy_sf_4 OS=Malassezi... 207 7e-51
I7AGE0_ENCRO (tr|I7AGE0) DNA-directed RNA polymerase OS=Encephal... 207 7e-51
K0KEY7_WICCF (tr|K0KEY7) DNA-directed RNA polymerase OS=Wickerha... 207 8e-51
K6UQ70_9APIC (tr|K6UQ70) DNA-directed RNA polymerase OS=Plasmodi... 207 1e-50
F0UK28_AJEC8 (tr|F0UK28) DNA-directed RNA polymerase OS=Ajellomy... 206 2e-50
O96236_PLAF7 (tr|O96236) DNA-directed RNA polymerase OS=Plasmodi... 206 2e-50
Q1HDJ9_9PLEO (tr|Q1HDJ9) DNA-directed RNA polymerase OS=Phaeosph... 206 2e-50
K1XWJ2_MARBU (tr|K1XWJ2) DNA-directed RNA polymerase OS=Marssoni... 206 2e-50
C0NB61_AJECG (tr|C0NB61) DNA-directed RNA polymerase OS=Ajellomy... 206 3e-50
F2QTX9_PICP7 (tr|F2QTX9) DNA-directed RNA polymerase OS=Komagata... 206 3e-50
C4QZQ7_PICPG (tr|C4QZQ7) DNA-directed RNA polymerase OS=Komagata... 206 3e-50
E0S9G2_ENCIT (tr|E0S9G2) DNA-directed RNA polymerase OS=Encephal... 206 3e-50
N4X6L4_COCHE (tr|N4X6L4) Uncharacterized protein OS=Bipolaris ma... 205 3e-50
M2SRF8_COCSA (tr|M2SRF8) DNA-directed RNA polymerase OS=Bipolari... 205 4e-50
M7UPJ1_BOTFU (tr|M7UPJ1) Putative dna-directed rna polymerase ii... 205 4e-50
G2XV39_BOTF4 (tr|G2XV39) DNA-directed RNA polymerase OS=Botryoti... 205 4e-50
Q1WMR3_COPDI (tr|Q1WMR3) DNA-directed RNA polymerase OS=Coprinel... 205 5e-50
Q1HDK3_9PLEO (tr|Q1HDK3) DNA-directed RNA polymerase OS=Phaeosph... 205 5e-50
M2UG86_COCHE (tr|M2UG86) DNA-directed RNA polymerase OS=Bipolari... 205 5e-50
E5A1Z6_LEPMJ (tr|E5A1Z6) DNA-directed RNA polymerase OS=Leptosph... 205 5e-50
Q1HDK1_9PLEO (tr|Q1HDK1) DNA-directed RNA polymerase OS=Phaeosph... 205 5e-50
I6UEV5_ENCHA (tr|I6UEV5) DNA-directed RNA polymerase OS=Encephal... 205 6e-50
R0J2Z8_SETTU (tr|R0J2Z8) Uncharacterized protein OS=Setosphaeria... 204 6e-50
Q2VA54_PHAND (tr|Q2VA54) DNA-directed RNA polymerase OS=Phaeosph... 204 6e-50
Q1HDI5_9PLEO (tr|Q1HDI5) DNA-directed RNA polymerase OS=Phaeosph... 204 6e-50
Q1HDI7_9PLEO (tr|Q1HDI7) DNA-directed RNA polymerase OS=Phaeosph... 204 6e-50
B6QUV1_PENMQ (tr|B6QUV1) DNA-directed RNA polymerase OS=Penicill... 204 9e-50
Q1HDJ8_PHAND (tr|Q1HDJ8) DNA-directed RNA polymerase OS=Phaeosph... 204 1e-49
Q1HDK2_9PLEO (tr|Q1HDK2) DNA-directed RNA polymerase OS=Phaeosph... 204 1e-49
M1KMC5_ENCCN (tr|M1KMC5) DNA-directed RNA polymerase OS=Encephal... 204 1e-49
B6HM08_PENCW (tr|B6HM08) DNA-directed RNA polymerase OS=Penicill... 203 1e-49
Q6QN96_COCHE (tr|Q6QN96) DNA-directed RNA polymerase OS=Cochliob... 203 2e-49
H0H179_9SACH (tr|H0H179) DNA-directed RNA polymerase OS=Saccharo... 202 2e-49
E3RQK0_PYRTT (tr|E3RQK0) DNA-directed RNA polymerase OS=Pyrenoph... 202 2e-49
Q7RQI2_PLAYO (tr|Q7RQI2) DNA-directed RNA polymerase OS=Plasmodi... 202 2e-49
G4TVM8_PIRID (tr|G4TVM8) DNA-directed RNA polymerase OS=Piriform... 202 3e-49
N1P384_YEASX (tr|N1P384) Rpb2p OS=Saccharomyces cerevisiae CEN.P... 202 3e-49
G2WN23_YEASK (tr|G2WN23) DNA-directed RNA polymerase OS=Saccharo... 202 3e-49
C8ZGQ9_YEAS8 (tr|C8ZGQ9) DNA-directed RNA polymerase OS=Saccharo... 202 3e-49
C7GN73_YEAS2 (tr|C7GN73) DNA-directed RNA polymerase OS=Saccharo... 202 3e-49
A6ZNZ5_YEAS7 (tr|A6ZNZ5) DNA-directed RNA polymerase OS=Saccharo... 202 3e-49
G0W7M5_NAUDC (tr|G0W7M5) DNA-directed RNA polymerase OS=Naumovoz... 202 3e-49
J8LI22_SACAR (tr|J8LI22) DNA-directed RNA polymerase OS=Saccharo... 202 3e-49
M2WUB3_GALSU (tr|M2WUB3) DNA-directed RNA polymerase OS=Galdieri... 202 4e-49
B2W4R0_PYRTR (tr|B2W4R0) DNA-directed RNA polymerase OS=Pyrenoph... 202 5e-49
B8MU25_TALSN (tr|B8MU25) DNA-directed RNA polymerase OS=Talaromy... 201 5e-49
G8ZM49_TORDC (tr|G8ZM49) DNA-directed RNA polymerase OS=Torulasp... 201 5e-49
H2AVJ8_KAZAF (tr|H2AVJ8) DNA-directed RNA polymerase OS=Kazachst... 201 6e-49
J7JG84_9LECA (tr|J7JG84) DNA-directed RNA polymerase OS=Peltiger... 201 7e-49
A5DVP4_LODEL (tr|A5DVP4) DNA-directed RNA polymerase OS=Lodderom... 201 7e-49
M7XE78_RHOTO (tr|M7XE78) DNA-directed RNA polymerase II subunit ... 201 7e-49
K9GQI6_PEND2 (tr|K9GQI6) DNA-directed RNA polymerase OS=Penicill... 201 8e-49
K9FQU8_PEND1 (tr|K9FQU8) DNA-directed RNA polymerase OS=Penicill... 201 8e-49
G0VJ71_NAUCC (tr|G0VJ71) DNA-directed RNA polymerase OS=Naumovoz... 201 8e-49
C5DLS0_LACTC (tr|C5DLS0) DNA-directed RNA polymerase OS=Lachance... 201 8e-49
K9HUT9_AGABB (tr|K9HUT9) DNA-directed RNA polymerase OS=Agaricus... 201 9e-49
J7JNY3_9LECA (tr|J7JNY3) DNA-directed RNA polymerase OS=Peltiger... 201 9e-49
Q9UVA1_CANAX (tr|Q9UVA1) DNA-directed RNA polymerase (Fragment) ... 200 1e-48
D2WKH9_MAIZE (tr|D2WKH9) Mutant required to maintain repression ... 200 1e-48
C5PAW2_COCP7 (tr|C5PAW2) DNA-directed RNA polymerase OS=Coccidio... 200 1e-48
Q5A8Y5_CANAL (tr|Q5A8Y5) DNA-directed RNA polymerase OS=Candida ... 200 1e-48
C4YFA4_CANAW (tr|C4YFA4) DNA-directed RNA polymerase OS=Candida ... 200 1e-48
L8G9U0_GEOD2 (tr|L8G9U0) DNA-directed RNA polymerase OS=Geomyces... 200 1e-48
B9W6V2_CANDC (tr|B9W6V2) DNA-directed RNA polymerase OS=Candida ... 200 1e-48
K5Y7D9_AGABU (tr|K5Y7D9) DNA-directed RNA polymerase OS=Agaricus... 200 1e-48
E9DJ48_COCPS (tr|E9DJ48) DNA-directed RNA polymerase OS=Coccidio... 200 1e-48
J3K4V5_COCIM (tr|J3K4V5) DNA-directed RNA polymerase OS=Coccidio... 200 1e-48
Q4Y5W4_PLACH (tr|Q4Y5W4) DNA-directed RNA polymerase II second l... 200 1e-48
I1CJ91_RHIO9 (tr|I1CJ91) DNA-directed RNA polymerase OS=Rhizopus... 200 2e-48
A8N2R8_COPC7 (tr|A8N2R8) DNA-directed RNA polymerase OS=Coprinop... 200 2e-48
C1H7W3_PARBA (tr|C1H7W3) DNA-directed RNA polymerase OS=Paracocc... 200 2e-48
I1CGX0_RHIO9 (tr|I1CGX0) DNA-directed RNA polymerase OS=Rhizopus... 199 2e-48
C1GAQ4_PARBD (tr|C1GAQ4) DNA-directed RNA polymerase OS=Paracocc... 199 2e-48
C0S0L5_PARBP (tr|C0S0L5) DNA-directed RNA polymerase OS=Paracocc... 199 2e-48
H8X225_CANO9 (tr|H8X225) DNA-directed RNA polymerase OS=Candida ... 199 2e-48
R9AC13_WALIC (tr|R9AC13) DNA-directed RNA polymerase II subunit ... 199 2e-48
E4V307_ARTGP (tr|E4V307) DNA-directed RNA polymerase OS=Arthrode... 199 2e-48
G8BY61_TETPH (tr|G8BY61) DNA-directed RNA polymerase OS=Tetrapis... 199 3e-48
A3GFG5_PICST (tr|A3GFG5) DNA-directed RNA polymerase OS=Scheffer... 199 3e-48
G8B5W9_CANPC (tr|G8B5W9) DNA-directed RNA polymerase OS=Candida ... 199 3e-48
M5FUN5_DACSP (tr|M5FUN5) DNA-dependent RNA polymerase II second ... 199 3e-48
J4CE27_THEOR (tr|J4CE27) DNA-directed RNA polymerase OS=Theileri... 199 3e-48
G8JU71_ERECY (tr|G8JU71) DNA-directed RNA polymerase OS=Eremothe... 199 3e-48
A7ATA0_BABBO (tr|A7ATA0) DNA-directed RNA polymerase OS=Babesia ... 199 3e-48
M9MZA2_ASHGS (tr|M9MZA2) FAFR404Cp OS=Ashbya gossypii FDAG1 GN=F... 199 4e-48
M7SLG7_9PEZI (tr|M7SLG7) Putative dna-directed rna polymerase ii... 198 4e-48
F4RF42_MELLP (tr|F4RF42) DNA-directed RNA polymerase OS=Melampso... 198 5e-48
I4YEC5_WALSC (tr|I4YEC5) DNA-directed RNA polymerase OS=Wallemia... 198 5e-48
F2S646_TRIT1 (tr|F2S646) DNA-directed RNA polymerase OS=Trichoph... 198 5e-48
F2STE4_TRIRC (tr|F2STE4) DNA-directed RNA polymerase OS=Trichoph... 197 7e-48
J7RV95_KAZNA (tr|J7RV95) DNA-directed RNA polymerase OS=Kazachst... 197 7e-48
I2GV93_TETBL (tr|I2GV93) DNA-directed RNA polymerase OS=Tetrapis... 197 7e-48
G3ADV4_SPAPN (tr|G3ADV4) DNA-directed RNA polymerase OS=Spathasp... 197 7e-48
G2X5X0_VERDV (tr|G2X5X0) DNA-directed RNA polymerase OS=Verticil... 197 7e-48
J9EEU9_9SPIT (tr|J9EEU9) DNA-directed RNA polymerase OS=Oxytrich... 197 7e-48
C5FJF0_ARTOC (tr|C5FJF0) DNA-directed RNA polymerase OS=Arthrode... 197 8e-48
D4CZ65_TRIVH (tr|D4CZ65) DNA-directed RNA polymerase OS=Trichoph... 197 8e-48
C9SGY6_VERA1 (tr|C9SGY6) DNA-directed RNA polymerase OS=Verticil... 197 9e-48
J4IBC9_FIBRA (tr|J4IBC9) DNA-directed RNA polymerase OS=Fibropor... 197 1e-47
D4APE8_ARTBC (tr|D4APE8) DNA-directed RNA polymerase OS=Arthrode... 197 1e-47
F2Q3J3_TRIEC (tr|F2Q3J3) DNA-directed RNA polymerase OS=Trichoph... 197 1e-47
F8PFZ4_SERL3 (tr|F8PFZ4) DNA-directed RNA polymerase OS=Serpula ... 197 1e-47
F8NF62_SERL9 (tr|F8NF62) DNA-directed RNA polymerase OS=Serpula ... 197 1e-47
G1XR81_ARTOA (tr|G1XR81) DNA-directed RNA polymerase OS=Arthrobo... 196 2e-47
C4JKI6_UNCRE (tr|C4JKI6) DNA-directed RNA polymerase II 138 kDa ... 196 3e-47
N4V473_COLOR (tr|N4V473) DNA-directed RNA polymerase ii subunit ... 196 3e-47
G4V0S0_NEUT9 (tr|G4V0S0) DNA-directed RNA polymerase OS=Neurospo... 196 3e-47
F8MVQ3_NEUT8 (tr|F8MVQ3) DNA-directed RNA polymerase OS=Neurospo... 196 3e-47
G8YRX4_PICSO (tr|G8YRX4) DNA-directed RNA polymerase OS=Pichia s... 196 3e-47
G8YQG2_PICSO (tr|G8YQG2) DNA-directed RNA polymerase OS=Pichia s... 195 3e-47
E3QBS9_COLGM (tr|E3QBS9) DNA-directed RNA polymerase OS=Colletot... 195 3e-47
Q872W7_NEUCS (tr|Q872W7) DNA-directed RNA polymerase OS=Neurospo... 195 4e-47
M3HH49_CANMA (tr|M3HH49) DNA-directed RNA polymerase (Fragment) ... 195 4e-47
H1VSW6_COLHI (tr|H1VSW6) DNA-directed RNA polymerase OS=Colletot... 195 4e-47
A7TTM7_VANPO (tr|A7TTM7) DNA-directed RNA polymerase OS=Vanderwa... 195 5e-47
B9RZ91_RICCO (tr|B9RZ91) DNA-directed RNA polymerase OS=Ricinus ... 195 6e-47
G3AW40_CANTC (tr|G3AW40) DNA-directed RNA polymerase OS=Candida ... 194 6e-47
L0B045_BABEQ (tr|L0B045) DNA-directed RNA polymerase OS=Babesia ... 194 6e-47
R4XK42_9ASCO (tr|R4XK42) Uncharacterized protein OS=Taphrina def... 194 7e-47
Q4N2K9_THEPA (tr|Q4N2K9) DNA-directed RNA polymerase OS=Theileri... 194 7e-47
B5RV50_DEBHA (tr|B5RV50) DNA-directed RNA polymerase OS=Debaryom... 194 7e-47
Q6CWA5_KLULA (tr|Q6CWA5) DNA-directed RNA polymerase OS=Kluyvero... 194 8e-47
Q1L5Y8_ANTMA (tr|Q1L5Y8) DNA-directed RNA polymerase OS=Antirrhi... 194 8e-47
Q1L5B5_RHOMC (tr|Q1L5B5) DNA-directed RNA polymerase OS=Rhododen... 194 8e-47
L1JND3_GUITH (tr|L1JND3) DNA-directed RNA polymerase OS=Guillard... 194 9e-47
H8ZDJ7_NEMS1 (tr|H8ZDJ7) DNA-directed RNA polymerase OS=Nematoci... 194 1e-46
C1E1U0_MICSR (tr|C1E1U0) DNA-directed RNA polymerase OS=Micromon... 194 1e-46
M7NUD7_9ASCO (tr|M7NUD7) Uncharacterized protein OS=Pneumocystis... 194 1e-46
Q1L5Y9_PETHY (tr|Q1L5Y9) DNA-directed RNA polymerase OS=Petunia ... 193 1e-46
K7XFL4_9EURO (tr|K7XFL4) DNA-directed RNA polymerase (Fragment) ... 193 1e-46
E9GHI4_DAPPU (tr|E9GHI4) DNA-directed RNA polymerase OS=Daphnia ... 193 2e-46
L2GHB3_COLGN (tr|L2GHB3) DNA-directed RNA polymerase OS=Colletot... 193 2e-46
M2QXP9_CERSU (tr|M2QXP9) DNA-directed RNA polymerase OS=Ceripori... 193 2e-46
G7I5Y3_MEDTR (tr|G7I5Y3) DNA-directed RNA polymerase OS=Medicago... 193 2e-46
M1CWR0_SOLTU (tr|M1CWR0) DNA-directed RNA polymerase OS=Solanum ... 192 2e-46
N1RYS8_FUSOX (tr|N1RYS8) DNA-directed RNA polymerase II subunit ... 192 2e-46
I0YKM0_9CHLO (tr|I0YKM0) DNA-directed RNA polymerase OS=Coccomyx... 192 3e-46
D8PSD2_SCHCM (tr|D8PSD2) DNA-directed RNA polymerase OS=Schizoph... 192 3e-46
N4UH38_FUSOX (tr|N4UH38) DNA-directed RNA polymerase II subunit ... 192 3e-46
A5C1N0_VITVI (tr|A5C1N0) DNA-directed RNA polymerase OS=Vitis vi... 192 3e-46
F0ZFN5_DICPU (tr|F0ZFN5) DNA-directed RNA polymerase OS=Dictyost... 192 3e-46
B6K5Q5_SCHJY (tr|B6K5Q5) DNA-directed RNA polymerase OS=Schizosa... 192 3e-46
F9F4K1_FUSOF (tr|F9F4K1) DNA-directed RNA polymerase OS=Fusarium... 192 3e-46
E9RHI6_9INSE (tr|E9RHI6) DNA-directed RNA polymerase OS=Pedetont... 192 4e-46
M5X2K1_PRUPE (tr|M5X2K1) Uncharacterized protein OS=Prunus persi... 192 4e-46
G9FIK7_LENED (tr|G9FIK7) DNA-directed RNA polymerase OS=Lentinul... 192 4e-46
R0H1I6_9BRAS (tr|R0H1I6) Uncharacterized protein OS=Capsella rub... 192 4e-46
J9N627_FUSO4 (tr|J9N627) DNA-directed RNA polymerase OS=Fusarium... 192 4e-46
M1VVJ0_CLAPU (tr|M1VVJ0) DNA-directed RNA polymerase OS=Clavicep... 192 5e-46
K4A4Z6_SETIT (tr|K4A4Z6) DNA-directed RNA polymerase OS=Setaria ... 191 7e-46
C7ZA30_NECH7 (tr|C7ZA30) DNA-directed RNA polymerase OS=Nectria ... 191 7e-46
Q6CAD6_YARLI (tr|Q6CAD6) DNA-directed RNA polymerase OS=Yarrowia... 191 8e-46
I1L1L2_SOYBN (tr|I1L1L2) DNA-directed RNA polymerase OS=Glycine ... 191 8e-46
I3ESM3_NEMP1 (tr|I3ESM3) DNA-directed RNA polymerase OS=Nematoci... 190 1e-45
I3EHD3_NEMP3 (tr|I3EHD3) DNA-directed RNA polymerase OS=Nematoci... 190 1e-45
I1MHA4_SOYBN (tr|I1MHA4) DNA-directed RNA polymerase OS=Glycine ... 190 1e-45
I7IFS2_BABMI (tr|I7IFS2) DNA-directed RNA polymerase OS=Babesia ... 190 1e-45
K7THS3_NEOAO (tr|K7THS3) DNA-directed RNA polymerase OS=Neotypho... 190 1e-45
L7JX25_TRAHO (tr|L7JX25) DNA-directed RNA polymerase (Fragment) ... 190 2e-45
F0XDY2_GROCL (tr|F0XDY2) DNA-directed RNA polymerase OS=Grosmann... 190 2e-45
I1GQ05_BRADI (tr|I1GQ05) DNA-directed RNA polymerase OS=Brachypo... 190 2e-45
B9H2V2_POPTR (tr|B9H2V2) Predicted protein (Fragment) OS=Populus... 189 2e-45
L7IUN9_MAGOR (tr|L7IUN9) DNA-directed RNA polymerase OS=Magnapor... 189 2e-45
L7HUN2_MAGOR (tr|L7HUN2) DNA-directed RNA polymerase OS=Magnapor... 189 2e-45
G4MR84_MAGO7 (tr|G4MR84) DNA-directed RNA polymerase OS=Magnapor... 189 2e-45
C4PBI7_9HYPO (tr|C4PBI7) DNA-directed RNA polymerase OS=Epichloe... 189 2e-45
L2GKH9_VITCO (tr|L2GKH9) DNA-directed RNA polymerase II subunit ... 189 2e-45
D7MEQ0_ARALL (tr|D7MEQ0) DNA-directed RNA polymerase OS=Arabidop... 189 2e-45
G9MQ39_HYPVG (tr|G9MQ39) DNA-directed RNA polymerase OS=Hypocrea... 189 2e-45
J3LR54_ORYBR (tr|J3LR54) DNA-directed RNA polymerase OS=Oryza br... 189 3e-45
K2RU19_MACPH (tr|K2RU19) DNA-directed RNA polymerase OS=Macropho... 189 3e-45
Q10G20_ORYSJ (tr|Q10G20) DNA-directed RNA polymerase OS=Oryza sa... 189 3e-45
I1PDW7_ORYGL (tr|I1PDW7) DNA-directed RNA polymerase OS=Oryza gl... 189 3e-45
A2XK42_ORYSI (tr|A2XK42) DNA-directed RNA polymerase OS=Oryza sa... 189 3e-45
Q1L5Z1_SOLLC (tr|Q1L5Z1) DNA-directed RNA polymerase OS=Solanum ... 189 3e-45
B0WKE9_CULQU (tr|B0WKE9) DNA-directed RNA polymerase OS=Culex qu... 189 3e-45
B9FA12_ORYSJ (tr|B9FA12) DNA-directed RNA polymerase OS=Oryza sa... 189 3e-45
C5DW43_ZYGRC (tr|C5DW43) DNA-directed RNA polymerase OS=Zygosacc... 189 3e-45
M4DAP0_BRARP (tr|M4DAP0) DNA-directed RNA polymerase OS=Brassica... 189 3e-45
G9NY90_HYPAI (tr|G9NY90) DNA-directed RNA polymerase OS=Hypocrea... 189 3e-45
F0VH35_NEOCL (tr|F0VH35) DNA-directed RNA polymerase OS=Neospora... 189 3e-45
J9E9C4_AEDAE (tr|J9E9C4) DNA-directed RNA polymerase OS=Aedes ae... 189 3e-45
E3WSY6_ANODA (tr|E3WSY6) DNA-directed RNA polymerase OS=Anophele... 189 3e-45
J3P8A5_GAGT3 (tr|J3P8A5) DNA-directed RNA polymerase OS=Gaeumann... 189 3e-45
J9VNC7_CRYNH (tr|J9VNC7) DNA-directed RNA polymerase OS=Cryptoco... 189 4e-45
E9RHL5_9NEOP (tr|E9RHL5) DNA-directed RNA polymerase OS=Metyloph... 189 4e-45
Q6RYH8_CRYNE (tr|Q6RYH8) DNA-directed RNA polymerase (Fragment) ... 189 4e-45
K7UAS6_BALOB (tr|K7UAS6) DNA-directed RNA polymerase OS=Balansia... 188 4e-45
Q55U25_CRYNB (tr|Q55U25) DNA-directed RNA polymerase OS=Cryptoco... 188 5e-45
Q5CY45_CRYPI (tr|Q5CY45) DNA-directed RNA polymerase OS=Cryptosp... 188 6e-45
M4FRT3_MAGP6 (tr|M4FRT3) DNA-directed RNA polymerase OS=Magnapor... 188 6e-45
B9PL56_TOXGO (tr|B9PL56) DNA-directed RNA polymerase OS=Toxoplas... 188 6e-45
E9RHI7_9INSE (tr|E9RHI7) DNA-directed RNA polymerase (Fragment) ... 187 7e-45
Q4U9X1_THEAN (tr|Q4U9X1) DNA-directed RNA polymerase OS=Theileri... 187 8e-45
G7EAJ7_MIXOS (tr|G7EAJ7) DNA-directed RNA polymerase OS=Mixia os... 187 1e-44
B7QNH8_IXOSC (tr|B7QNH8) DNA-directed RNA polymerase OS=Ixodes s... 187 1e-44
G0RMK6_HYPJQ (tr|G0RMK6) DNA-directed RNA polymerase OS=Hypocrea... 187 1e-44
Q1L5B4_RHOMC (tr|Q1L5B4) DNA-directed RNA polymerase OS=Rhododen... 187 1e-44
L2GTS6_VAVCU (tr|L2GTS6) DNA-directed RNA polymerase OS=Vavraia ... 187 1e-44
Q1L5Z2_PETHY (tr|Q1L5Z2) DNA-directed RNA polymerase OS=Petunia ... 187 1e-44
H6C0S4_EXODN (tr|H6C0S4) DNA-directed RNA polymerase OS=Exophial... 187 1e-44
E9RHJ8_KARBI (tr|E9RHJ8) DNA-directed RNA polymerase OS=Karoopha... 186 2e-44
G0MEL6_CAEBE (tr|G0MEL6) DNA-directed RNA polymerase OS=Caenorha... 186 2e-44
D8RLN5_SELML (tr|D8RLN5) DNA-directed RNA polymerase OS=Selagine... 186 2e-44
C5MEG3_CANTT (tr|C5MEG3) DNA-directed RNA polymerase OS=Candida ... 186 2e-44
D8RN68_SELML (tr|D8RN68) DNA-directed RNA polymerase OS=Selagine... 186 2e-44
K3W3I0_FUSPC (tr|K3W3I0) DNA-directed RNA polymerase OS=Fusarium... 186 2e-44
Q5CN11_CRYHO (tr|Q5CN11) DNA-directed RNA polymerase (EC 2.7.7.6... 186 2e-44
G2QVH8_THITE (tr|G2QVH8) DNA-directed RNA polymerase OS=Thielavi... 186 2e-44
I1F4T1_AMPQE (tr|I1F4T1) DNA-directed RNA polymerase OS=Amphimed... 186 3e-44
A9SJE5_PHYPA (tr|A9SJE5) DNA-directed RNA polymerase OS=Physcomi... 186 3e-44
Q7QAK7_ANOGA (tr|Q7QAK7) DNA-directed RNA polymerase OS=Anophele... 186 3e-44
E9RHK2_9NEOP (tr|E9RHK2) DNA-directed RNA polymerase OS=Oyamia l... 186 3e-44
R8BGT8_9PEZI (tr|R8BGT8) Putative dna-directed rna polymerase ii... 185 4e-44
I1RG11_GIBZE (tr|I1RG11) DNA-directed RNA polymerase OS=Gibberel... 185 4e-44
J9D814_EDHAE (tr|J9D814) Uncharacterized protein (Fragment) OS=E... 185 4e-44
B6AET6_CRYMR (tr|B6AET6) DNA-directed RNA polymerase OS=Cryptosp... 185 4e-44
E9RHL1_9HEMI (tr|E9RHL1) DNA-directed RNA polymerase OS=Cryptoty... 185 4e-44
C1ML14_MICPC (tr|C1ML14) DNA-directed RNA polymerase OS=Micromon... 185 4e-44
M0RXD4_MUSAM (tr|M0RXD4) DNA-directed RNA polymerase OS=Musa acu... 185 5e-44
E9RHM0_9NEOP (tr|E9RHM0) DNA-directed RNA polymerase OS=Chrysope... 185 6e-44
E9RHM5_9NEOP (tr|E9RHM5) DNA-directed RNA polymerase OS=Stenopsy... 185 6e-44
R1GFK0_9PEZI (tr|R1GFK0) Putative rna polymerase ii second large... 184 6e-44
G1QFC2_MYOLU (tr|G1QFC2) DNA-directed RNA polymerase OS=Myotis l... 184 7e-44
F4Q0U4_DICFS (tr|F4Q0U4) DNA-directed RNA polymerase OS=Dictyost... 184 7e-44
K7HCA4_CAEJA (tr|K7HCA4) Uncharacterized protein OS=Caenorhabdit... 184 8e-44
G2QG82_THIHA (tr|G2QG82) DNA-directed RNA polymerase OS=Thielavi... 184 8e-44
K7HCA1_CAEJA (tr|K7HCA1) DNA-directed RNA polymerase OS=Caenorha... 184 8e-44
Q1L5Z4_NICSY (tr|Q1L5Z4) DNA-directed RNA polymerase OS=Nicotian... 184 9e-44
E9RHM7_CTEFE (tr|E9RHM7) DNA-directed RNA polymerase OS=Ctenocep... 184 9e-44
J4KKN4_BEAB2 (tr|J4KKN4) DNA-directed RNA polymerase OS=Beauveri... 184 9e-44
E9RHK6_TENAI (tr|E9RHK6) DNA-directed RNA polymerase OS=Tenodera... 184 9e-44
E9RHM2_9DYTI (tr|E9RHM2) DNA-directed RNA polymerase OS=Eretes s... 184 1e-43
E9RHK0_9ORTH (tr|E9RHK0) DNA-directed RNA polymerase OS=Euconoce... 184 1e-43
M3AZS4_9PEZI (tr|M3AZS4) DNA-directed RNA polymerase OS=Pseudoce... 184 1e-43
E9RHK1_9ORTH (tr|E9RHK1) DNA-directed RNA polymerase OS=Teleogry... 184 1e-43
E1G0C9_LOALO (tr|E1G0C9) DNA-directed RNA polymerase OS=Loa loa ... 184 1e-43
C1LF25_SCHJA (tr|C1LF25) DNA-directed RNA polymerase OS=Schistos... 183 1e-43
E9RHI9_9INSE (tr|E9RHI9) DNA-directed RNA polymerase OS=Thermobi... 183 1e-43
A7SHD8_NEMVE (tr|A7SHD8) DNA-directed RNA polymerase OS=Nematost... 183 2e-43
E9RHJ0_9INSE (tr|E9RHJ0) DNA-directed RNA polymerase OS=Isolepis... 183 2e-43
E9RHL0_9NEOP (tr|E9RHL0) DNA-directed RNA polymerase (Fragment) ... 182 2e-43
F1KR73_ASCSU (tr|F1KR73) DNA-directed RNA polymerase OS=Ascaris ... 182 2e-43
K7F4X4_PELSI (tr|K7F4X4) Uncharacterized protein OS=Pelodiscus s... 182 2e-43
E9RHK3_9NEOP (tr|E9RHK3) DNA-directed RNA polymerase OS=Euborell... 182 3e-43
L5JW67_PTEAL (tr|L5JW67) DNA-directed RNA polymerase OS=Pteropus... 182 3e-43
E9RHM6_9NEOP (tr|E9RHM6) DNA-directed RNA polymerase OS=Panorpa ... 182 3e-43
K1V1A7_TRIAC (tr|K1V1A7) DNA-directed RNA polymerase OS=Trichosp... 182 3e-43
H0YXL1_TAEGU (tr|H0YXL1) DNA-directed RNA polymerase OS=Taeniopy... 182 3e-43
F1NCB0_CHICK (tr|F1NCB0) DNA-directed RNA polymerase OS=Gallus g... 182 4e-43
E9RHK9_9NEOP (tr|E9RHK9) DNA-directed RNA polymerase (Fragment) ... 182 4e-43
M3CKY8_9PEZI (tr|M3CKY8) DNA-directed RNA polymerase OS=Mycospha... 182 4e-43
I3ITZ5_ORENI (tr|I3ITZ5) DNA-directed RNA polymerase OS=Oreochro... 182 4e-43
J3S0Q3_CROAD (tr|J3S0Q3) DNA-directed RNA polymerase OS=Crotalus... 182 4e-43
H2N223_ORYLA (tr|H2N223) DNA-directed RNA polymerase OS=Oryzias ... 182 5e-43
D8TN12_VOLCA (tr|D8TN12) DNA-directed RNA polymerase OS=Volvox c... 182 5e-43
E9RHJ7_9NEOP (tr|E9RHJ7) DNA-directed RNA polymerase OS=Galloisi... 181 5e-43
K7X287_9EURO (tr|K7X287) DNA-directed RNA polymerase (Fragment) ... 181 5e-43
F7FJ20_ORNAN (tr|F7FJ20) Uncharacterized protein OS=Ornithorhync... 181 5e-43
E9RHJ5_9NEOP (tr|E9RHJ5) DNA-directed RNA polymerase (Fragment) ... 181 6e-43
B4N9I3_DROWI (tr|B4N9I3) DNA-directed RNA polymerase OS=Drosophi... 181 6e-43
E9RHL8_9NEOP (tr|E9RHL8) DNA-directed RNA polymerase OS=Protoher... 181 6e-43
Q1L5X1_CHLRE (tr|Q1L5X1) DNA-directed RNA polymerase OS=Chlamydo... 181 6e-43
G7MT90_MACMU (tr|G7MT90) DNA-directed RNA polymerase OS=Macaca m... 181 6e-43
G1PVB8_MYOLU (tr|G1PVB8) DNA-directed RNA polymerase OS=Myotis l... 181 6e-43
Q298X6_DROPS (tr|Q298X6) DNA-directed RNA polymerase OS=Drosophi... 181 6e-43
B4G4U0_DROPE (tr|B4G4U0) DNA-directed RNA polymerase OS=Drosophi... 181 6e-43
B3S2W9_TRIAD (tr|B3S2W9) DNA-directed RNA polymerase OS=Trichopl... 181 6e-43
C5LU72_PERM5 (tr|C5LU72) DNA-directed RNA polymerase OS=Perkinsu... 181 7e-43
C9J2Y9_HUMAN (tr|C9J2Y9) DNA-directed RNA polymerase OS=Homo sap... 181 7e-43
I3LGP4_PIG (tr|I3LGP4) DNA-directed RNA polymerase OS=Sus scrofa... 181 7e-43
L7MJS3_9ACAR (tr|L7MJS3) DNA-directed RNA polymerase (Fragment) ... 181 7e-43
G1RCE0_NOMLE (tr|G1RCE0) DNA-directed RNA polymerase OS=Nomascus... 181 7e-43
D2H8J2_AILME (tr|D2H8J2) DNA-directed RNA polymerase (Fragment) ... 181 7e-43
M3Y010_MUSPF (tr|M3Y010) DNA-directed RNA polymerase OS=Mustela ... 181 7e-43
M3W165_FELCA (tr|M3W165) DNA-directed RNA polymerase OS=Felis ca... 181 7e-43
E2RNN5_CANFA (tr|E2RNN5) DNA-directed RNA polymerase OS=Canis fa... 181 7e-43
A5PJW8_BOVIN (tr|A5PJW8) DNA-directed RNA polymerase OS=Bos taur... 181 7e-43
B3P0M0_DROER (tr|B3P0M0) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
K7E2Q4_MONDO (tr|K7E2Q4) DNA-directed RNA polymerase OS=Monodelp... 181 7e-43
B4K015_DROGR (tr|B4K015) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
G3WU38_SARHA (tr|G3WU38) DNA-directed RNA polymerase OS=Sarcophi... 181 7e-43
H0VMR7_CAVPO (tr|H0VMR7) DNA-directed RNA polymerase OS=Cavia po... 181 7e-43
G3V8Y5_RAT (tr|G3V8Y5) DNA-directed RNA polymerase OS=Rattus nor... 181 7e-43
H2QPI8_PANTR (tr|H2QPI8) DNA-directed RNA polymerase OS=Pan trog... 181 7e-43
H2PDB9_PONAB (tr|H2PDB9) DNA-directed RNA polymerase OS=Pongo ab... 181 7e-43
H0XEF9_OTOGA (tr|H0XEF9) DNA-directed RNA polymerase OS=Otolemur... 181 7e-43
G7P5R6_MACFA (tr|G7P5R6) DNA-directed RNA polymerase OS=Macaca f... 181 7e-43
F6QI47_MACMU (tr|F6QI47) DNA-directed RNA polymerase OS=Macaca m... 181 7e-43
F6PQF5_CALJA (tr|F6PQF5) DNA-directed RNA polymerase OS=Callithr... 181 7e-43
B3LYR3_DROAN (tr|B3LYR3) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
B4M040_DROVI (tr|B4M040) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
B4HF52_DROSE (tr|B4HF52) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
B4PTC0_DROYA (tr|B4PTC0) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
B4KDW5_DROMO (tr|B4KDW5) DNA-directed RNA polymerase OS=Drosophi... 181 7e-43
L8IER4_BOSMU (tr|L8IER4) DNA-directed RNA polymerase OS=Bos grun... 181 7e-43
G1TBH1_RABIT (tr|G1TBH1) DNA-directed RNA polymerase OS=Oryctola... 181 7e-43
E9RHK4_9NEOP (tr|E9RHK4) DNA-directed RNA polymerase OS=Forficul... 181 8e-43
B4R0H5_DROSI (tr|B4R0H5) DNA-directed RNA polymerase OS=Drosophi... 181 8e-43
D6WZU5_TRICA (tr|D6WZU5) DNA-directed RNA polymerase OS=Triboliu... 181 8e-43
G1LPS1_AILME (tr|G1LPS1) DNA-directed RNA polymerase (Fragment) ... 181 8e-43
R7VDQ3_9ANNE (tr|R7VDQ3) Uncharacterized protein OS=Capitella te... 181 8e-43
Q6DRH1_DANRE (tr|Q6DRH1) RNA polymerase II subunit B (Fragment) ... 181 9e-43
C5WR62_SORBI (tr|C5WR62) DNA-directed RNA polymerase OS=Sorghum ... 181 9e-43
M4ALN2_XIPMA (tr|M4ALN2) DNA-directed RNA polymerase OS=Xiphopho... 181 9e-43
Q1L5Z3_ANTMA (tr|Q1L5Z3) DNA-directed RNA polymerase OS=Antirrhi... 181 9e-43
Q6PA46_XENLA (tr|Q6PA46) MGC68569 protein OS=Xenopus laevis GN=p... 181 9e-43
C0HA74_SALSA (tr|C0HA74) DNA-directed RNA polymerase OS=Salmo sa... 181 9e-43
H3CH30_TETNG (tr|H3CH30) DNA-directed RNA polymerase (Fragment) ... 181 1e-42
G7YSR1_CLOSI (tr|G7YSR1) DNA-directed RNA polymerase OS=Clonorch... 181 1e-42
A0DEB3_PARTE (tr|A0DEB3) DNA-directed RNA polymerase OS=Parameci... 181 1e-42
E9RHL6_9HYME (tr|E9RHL6) DNA-directed RNA polymerase OS=Neocoloc... 180 1e-42
E9RHK5_9NEOP (tr|E9RHK5) DNA-directed RNA polymerase OS=Zorotypu... 180 1e-42
G1Q9D0_MYOLU (tr|G1Q9D0) DNA-directed RNA polymerase OS=Myotis l... 180 1e-42
F1QXY8_DANRE (tr|F1QXY8) DNA-directed RNA polymerase OS=Danio re... 180 1e-42
Q4T1Y4_TETNG (tr|Q4T1Y4) DNA-directed RNA polymerase (Fragment) ... 180 1e-42
G3JN95_CORMM (tr|G3JN95) DNA-directed RNA polymerase OS=Cordycep... 180 1e-42
E9RHM3_9COLE (tr|E9RHM3) DNA-directed RNA polymerase OS=Lucidina... 180 1e-42
F9X8C0_MYCGM (tr|F9X8C0) DNA-directed RNA polymerase OS=Mycospha... 180 1e-42
Q27826_EUPOC (tr|Q27826) DNA-directed RNA polymerase OS=Euplotes... 180 2e-42
A8Q7K3_BRUMA (tr|A8Q7K3) DNA-directed RNA polymerase OS=Brugia m... 180 2e-42
G4VSK5_SCHMA (tr|G4VSK5) DNA-directed RNA polymerase OS=Schistos... 180 2e-42
H9G640_ANOCA (tr|H9G640) DNA-directed RNA polymerase OS=Anolis c... 180 2e-42
B2ADP9_PODAN (tr|B2ADP9) DNA-directed RNA polymerase OS=Podospor... 180 2e-42
E9RHI8_9INSE (tr|E9RHI8) DNA-directed RNA polymerase OS=Nipponat... 180 2e-42
G3PV24_GASAC (tr|G3PV24) DNA-directed RNA polymerase (Fragment) ... 179 2e-42
E9RHJ6_9NEOP (tr|E9RHJ6) DNA-directed RNA polymerase (Fragment) ... 179 2e-42
E9RHL7_VESAN (tr|E9RHL7) DNA-directed RNA polymerase OS=Vespa an... 179 2e-42
H3A0Y3_LATCH (tr|H3A0Y3) DNA-directed RNA polymerase OS=Latimeri... 179 2e-42
G3PV19_GASAC (tr|G3PV19) DNA-directed RNA polymerase OS=Gasteros... 179 2e-42
F7D1D0_MONDO (tr|F7D1D0) DNA-directed RNA polymerase (Fragment) ... 179 2e-42
Q5ZMN9_CHICK (tr|Q5ZMN9) DNA-directed RNA polymerase OS=Gallus g... 179 2e-42
E9RHL9_9NEOP (tr|E9RHL9) DNA-directed RNA polymerase OS=Inocelli... 179 3e-42
A8XS50_CAEBR (tr|A8XS50) DNA-directed RNA polymerase OS=Caenorha... 179 3e-42
E9RHJ3_9INSE (tr|E9RHJ3) DNA-directed RNA polymerase OS=Ephemera... 179 3e-42
F6ZLV2_HORSE (tr|F6ZLV2) DNA-directed RNA polymerase OS=Equus ca... 179 3e-42
R0KNH7_ANAPL (tr|R0KNH7) DNA-directed RNA polymerase II subunit ... 179 3e-42
E9RHL4_9HEMI (tr|E9RHL4) DNA-directed RNA polymerase OS=Uroleuco... 178 5e-42
J6EWH7_TRIAS (tr|J6EWH7) DNA-directed RNA polymerase OS=Trichosp... 178 5e-42
J9K837_ACYPI (tr|J9K837) DNA-directed RNA polymerase OS=Acyrthos... 178 5e-42
E3MCL2_CAERE (tr|E3MCL2) DNA-directed RNA polymerase OS=Caenorha... 178 5e-42
E9RHJ4_9INSE (tr|E9RHJ4) DNA-directed RNA polymerase (Fragment) ... 178 5e-42
K9IUP5_DESRO (tr|K9IUP5) DNA-directed RNA polymerase (Fragment) ... 178 6e-42
K4MSF5_9EUKA (tr|K4MSF5) RPB2 OS=Amoeboaphelidium protococcarum ... 178 6e-42
E9RHM1_9NEOP (tr|E9RHM1) DNA-directed RNA polymerase OS=Stichotr... 178 6e-42
M2NI14_9PEZI (tr|M2NI14) DNA-directed RNA polymerase OS=Baudoini... 178 6e-42
N1PU55_MYCPJ (tr|N1PU55) Uncharacterized protein OS=Dothistroma ... 178 7e-42
K7WME9_9EURO (tr|K7WME9) DNA-directed RNA polymerase (Fragment) ... 177 7e-42
E2A9Y4_CAMFO (tr|E2A9Y4) DNA-directed RNA polymerase OS=Camponot... 177 8e-42
M1V7I5_CYAME (tr|M1V7I5) DNA-directed RNA polymerase OS=Cyanidio... 177 1e-41
F0WJN8_9STRA (tr|F0WJN8) DNA-directed RNA polymerase OS=Albugo l... 177 1e-41
Q23G41_TETTS (tr|Q23G41) DNA-directed RNA polymerase OS=Tetrahym... 177 1e-41
B4DHJ3_HUMAN (tr|B4DHJ3) DNA-directed RNA polymerase OS=Homo sap... 177 2e-41
H9I968_ATTCE (tr|H9I968) DNA-directed RNA polymerase OS=Atta cep... 176 2e-41
F4WT97_ACREC (tr|F4WT97) DNA-directed RNA polymerase OS=Acromyrm... 176 2e-41
L8WU33_9HOMO (tr|L8WU33) DNA-directed RNA polymerase OS=Rhizocto... 176 2e-41
B4FHF6_MAIZE (tr|B4FHF6) Putative DNA-directed RNA polymerase su... 176 2e-41
K7WHX9_9EURO (tr|K7WHX9) DNA-directed RNA polymerase (Fragment) ... 176 2e-41
G1N8R7_MELGA (tr|G1N8R7) DNA-directed RNA polymerase OS=Meleagri... 176 2e-41
K7WPP4_9EURO (tr|K7WPP4) DNA-directed RNA polymerase (Fragment) ... 176 2e-41
R7Z672_9EURO (tr|R7Z672) DNA-directed RNA polymerase II subunit ... 176 2e-41
E5SNY3_TRISP (tr|E5SNY3) DNA-directed RNA polymerase OS=Trichine... 176 2e-41
D5G674_TUBMM (tr|D5G674) Whole genome shotgun sequence assembly,... 175 4e-41
B8C598_THAPS (tr|B8C598) DNA-directed RNA polymerase OS=Thalassi... 175 6e-41
K3XBN8_PYTUL (tr|K3XBN8) DNA-directed RNA polymerase OS=Pythium ... 174 6e-41
F6QHD9_XENTR (tr|F6QHD9) Uncharacterized protein OS=Xenopus trop... 174 6e-41
E4WYS3_OIKDI (tr|E4WYS3) DNA-directed RNA polymerase OS=Oikopleu... 174 7e-41
M4BF07_HYAAE (tr|M4BF07) DNA-directed RNA polymerase OS=Hyaloper... 174 9e-41
B7FVG3_PHATC (tr|B7FVG3) DNA-directed RNA polymerase OS=Phaeodac... 174 1e-40
A2E7H8_TRIVA (tr|A2E7H8) DNA-directed RNA polymerase OS=Trichomo... 174 1e-40
H2Y4I6_CIOSA (tr|H2Y4I6) DNA-directed RNA polymerase (Fragment) ... 174 1e-40
J9HP49_9SPIT (tr|J9HP49) DNA-directed RNA polymerase OS=Oxytrich... 174 1e-40
E7R605_PICAD (tr|E7R605) DNA-directed RNA polymerase OS=Pichia a... 173 1e-40
F6QR00_CIOIN (tr|F6QR00) DNA-directed RNA polymerase OS=Ciona in... 173 2e-40
D0NLW9_PHYIT (tr|D0NLW9) DNA-directed RNA polymerase OS=Phytopht... 173 2e-40
Q1L5A7_SPIOL (tr|Q1L5A7) RNA polymerase II second largest subuni... 172 2e-40
G4ZDX4_PHYSP (tr|G4ZDX4) DNA-directed RNA polymerase OS=Phytopht... 172 3e-40
C3Y5U9_BRAFL (tr|C3Y5U9) DNA-directed RNA polymerase OS=Branchio... 172 3e-40
F2U1S2_SALS5 (tr|F2U1S2) DNA-directed RNA polymerase OS=Salpingo... 172 4e-40
H2Y4I5_CIOSA (tr|H2Y4I5) DNA-directed RNA polymerase (Fragment) ... 172 4e-40
G0S9E0_CHATD (tr|G0S9E0) DNA-directed RNA polymerase OS=Chaetomi... 172 4e-40
H2Y4I7_CIOSA (tr|H2Y4I7) DNA-directed RNA polymerase (Fragment) ... 171 8e-40
F7WAM6_SORMK (tr|F7WAM6) DNA-directed RNA polymerase OS=Sordaria... 170 1e-39
D9Q2P2_ACIS3 (tr|D9Q2P2) DNA-directed RNA polymerase OS=Acidilob... 170 2e-39
H3GA07_PHYRM (tr|H3GA07) DNA-directed RNA polymerase OS=Phytopht... 170 2e-39
Q9UV93_TRIRU (tr|Q9UV93) DNA-directed RNA polymerase (Fragment) ... 169 3e-39
A1RWW6_THEPD (tr|A1RWW6) DNA-directed RNA polymerase OS=Thermofi... 168 6e-39
K0RD88_THAOC (tr|K0RD88) DNA-directed RNA polymerase OS=Thalassi... 167 9e-39
E9CJ84_CAPO3 (tr|E9CJ84) DNA-directed RNA polymerase OS=Capsaspo... 166 3e-38
B0EG45_ENTDS (tr|B0EG45) DNA-directed RNA polymerase OS=Entamoeb... 165 4e-38
K2HIY3_ENTNP (tr|K2HIY3) DNA-directed RNA polymerase OS=Entamoeb... 165 5e-38
G4T5Z4_PIRID (tr|G4T5Z4) DNA-directed RNA polymerase OS=Piriform... 165 5e-38
F9CUN4_9ARCH (tr|F9CUN4) DNA-directed RNA polymerase OS=Candidat... 165 6e-38
N9TG63_ENTHI (tr|N9TG63) DNA-directed RNA polymerase II subunit ... 164 8e-38
M7VTL8_ENTHI (tr|M7VTL8) DNA-directed RNA polymerase II subunit ... 164 8e-38
M3UPA5_ENTHI (tr|M3UPA5) DNA-directed RNA polymerase OS=Entamoeb... 164 8e-38
M2S5B4_ENTHI (tr|M2S5B4) DNA-directed RNA polymerase OS=Entamoeb... 164 8e-38
C4LUK7_ENTHI (tr|C4LUK7) DNA-directed RNA polymerase OS=Entamoeb... 164 8e-38
F3KKS9_9ARCH (tr|F3KKS9) DNA-directed RNA polymerase OS=Candidat... 164 8e-38
M4DWL7_BRARP (tr|M4DWL7) DNA-directed RNA polymerase OS=Brassica... 164 9e-38
K0B419_9ARCH (tr|K0B419) DNA-directed RNA polymerase OS=Candidat... 164 9e-38
Q6QM23_GIBMO (tr|Q6QM23) DNA-directed RNA polymerase (Fragment) ... 164 1e-37
E1QR99_VULDI (tr|E1QR99) DNA-directed RNA polymerase OS=Vulcanis... 163 2e-37
I1FS94_AMPQE (tr|I1FS94) DNA-directed RNA polymerase OS=Amphimed... 163 2e-37
F0QWN8_VULM7 (tr|F0QWN8) DNA-directed RNA polymerase OS=Vulcanis... 162 3e-37
Q1L5A8_9MAGN (tr|Q1L5A8) RNA polymerase II second largest subuni... 162 4e-37
B9IDF9_POPTR (tr|B9IDF9) DNA-directed RNA polymerase (Fragment) ... 162 5e-37
D3RWS0_FERPA (tr|D3RWS0) RNA polymerase beta subunit OS=Ferroglo... 162 5e-37
Q1L5Z0_NICSY (tr|Q1L5Z0) DNA-directed RNA polymerase (Fragment) ... 162 5e-37
A9RJY4_PHYPA (tr|A9RJY4) DNA-directed RNA polymerase OS=Physcomi... 162 5e-37
Q1L6C4_9MAGN (tr|Q1L6C4) DNA-directed RNA polymerase (Fragment) ... 161 6e-37
M5FVM7_DACSP (tr|M5FVM7) Subunit of DNA dependent RNA-polymerase... 161 6e-37
K0BCP6_9ARCH (tr|K0BCP6) DNA-directed RNA polymerase OS=Candidat... 161 6e-37
D7FHZ3_ECTSI (tr|D7FHZ3) DNA-directed RNA polymerase OS=Ectocarp... 161 8e-37
F2Y186_9PHYC (tr|F2Y186) DNA-directed RNA polymerase OS=Organic ... 161 8e-37
Q1L5Z6_9MAGN (tr|Q1L5Z6) DNA-directed RNA polymerase (Fragment) ... 161 9e-37
Q1L5Z7_9MAGN (tr|Q1L5Z7) DNA-directed RNA polymerase (Fragment) ... 161 9e-37
A2BN33_HYPBU (tr|A2BN33) DNA-directed RNA polymerase OS=Hyperthe... 161 9e-37
B7R288_9EURY (tr|B7R288) DNA-directed RNA polymerase OS=Thermoco... 160 1e-36
>K7KIE2_SOYBN (tr|K7KIE2) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1205
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/594 (70%), Positives = 485/594 (81%), Gaps = 4/594 (0%)
Query: 1 MGHIGSSKDGIGINLXXXXXXXXXXXXXXXXXXXXXXSS-SNAEILKELGEDMVKHFCTK 59
MGH+GSSKDG + L +N+EIL+ELGEDMVK++C K
Sbjct: 1 MGHVGSSKDGTKVGLSAAAMDIDDDDDDDDDDLGDVDLDPTNSEILEELGEDMVKYWCKK 60
Query: 60 ASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVK 119
AS +FFDE+GL+SHQINS+N F+A GLQ FD+FGDL VTP +DPSKKG+NEHF+YA+VK
Sbjct: 61 ASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFDPSKKGENEHFRYASVK 120
Query: 120 FGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKT 179
FGKV LD+P FWGG NAQEFKMLPRHAR+QRMTYA+K+K+ V+VQV+ P KVRSDKFKT
Sbjct: 121 FGKVKLDKPMFWGGEGNAQEFKMLPRHARIQRMTYASKVKIQVKVQVYVPKKVRSDKFKT 180
Query: 180 GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFV 239
GKE++ GRLPVMV SDLCWMK+AEK D +FDHGGYF++KGAEK F+
Sbjct: 181 GKEEFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAEKDDDEFDHGGYFIVKGAEKTFI 240
Query: 240 AQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEV 299
AQEQL+LK+LWV N+P W I YKS KRNR+++KLVGNS+ EE+ NG+ L+VYFL VEV
Sbjct: 241 AQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRSEEVENGDMCLTVYFLSVEV 300
Query: 300 PVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEE 359
PVW+LFF+LGVSSDKEI+DLI GN+D +IQNI F S+RDADEKC FR+ +NA+ Y+E+
Sbjct: 301 PVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEKCGAFRRVRNAVQYLEK 360
Query: 360 HVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 419
VK +Q+PPSESM+ECL +Y+FPG SGLNRKARFLAYMVK LLLAYTGRRKCDNRDDFRN
Sbjct: 361 CVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRN 420
Query: 420 KRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 479
KR KVH AHARKRM+KALQRDL GDRDVRPIEHYLDASIITNGLQRAFS
Sbjct: 421 KRLELASELLDRELKVHVAHARKRMAKALQRDLYGDRDVRPIEHYLDASIITNGLQRAFS 480
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TGAW+HPYKR+ER SGVVAN+GRTNPLQTMAELRR RQQVQYTGKVGDARYPHPSHWGKV
Sbjct: 481 TGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKV 540
Query: 540 CFLSTPDGENCGLVKNLSVTGLVS---TNISESIFPQLLDCGMEELVDDTTTFL 590
CFL+TPDGENCGLVKNLSVTGLVS T+++ESI +L+DCGM+ELVDDT+T L
Sbjct: 541 CFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKLVDCGMQELVDDTSTHL 594
>I1K8M4_SOYBN (tr|I1K8M4) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=2
Length = 1205
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/596 (69%), Positives = 482/596 (80%), Gaps = 5/596 (0%)
Query: 1 MGHIGSSKDGIGINLXXXXXXXXXXXXXXXXXXXXXXSSSNAEILKELGEDMVKHFCTKA 60
MGH+GSSKDG +NAEIL+ELGED+VK++C KA
Sbjct: 1 MGHVGSSKDGT--EAGPSAAAMGIDDDEDIDLGDVDLDPTNAEILEELGEDIVKYWCKKA 58
Query: 61 SRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKF 120
S +FF+E+GL+SHQINS+N FI GLQ F++FGDL VTP +DPSKKG+NEHF+YA+VKF
Sbjct: 59 SMLFFNEYGLISHQINSFNHFIHTGLQKTFESFGDLVVTPGFDPSKKGENEHFRYASVKF 118
Query: 121 GKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTG 180
G V LD+P FWGG NAQEFKMLPRHAR+QRMTYA+K+K+ V+VQV+ P KVRSDKFKTG
Sbjct: 119 GNVKLDKPMFWGGEGNAQEFKMLPRHARIQRMTYASKVKIQVKVQVYVPKKVRSDKFKTG 178
Query: 181 KEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFVA 240
K ++ GRLPVMV SDLCWMKEAEK D +FDHGGYF++KGAEK F+A
Sbjct: 179 KAEFLDREVMKEDEREIIIGRLPVMVKSDLCWMKEAEKEDDEFDHGGYFIVKGAEKTFIA 238
Query: 241 QEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVP 300
QEQL+LK+LWV N+P W I YKS KRNR+++KLVGNS+ EE+ NG+ L+VYFL VEVP
Sbjct: 239 QEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRGEEVENGDMSLAVYFLSVEVP 298
Query: 301 VWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH 360
VW+LFF+LGVSSDKEI+DLI GN+D +IQNI F S+RDADEKC FR+G++A+ Y+E+
Sbjct: 299 VWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEKCGAFRRGRHAVQYLEKC 358
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
VK +Q+PPSESM+ECL +Y+FPG SGLNRKARFLAYMVK LLLAYTGRRKCDNRDDFRNK
Sbjct: 359 VKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNK 418
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R KVH AHARKRM+KALQRDL GDRDVRPIEHYLDASIITNGLQRAFST
Sbjct: 419 RLELASELLDRELKVHIAHARKRMAKALQRDLYGDRDVRPIEHYLDASIITNGLQRAFST 478
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
GAW+HPYKR+ER SGVVAN+GRTNPLQTMAELRR RQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 479 GAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVC 538
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTN---ISESIFPQLLDCGMEELVDDTTTFLSKK 593
FLSTPDGENCGLVKNL+VTGLVST+ +SE I P+LLDCGMEELVDDT+T L K
Sbjct: 539 FLSTPDGENCGLVKNLAVTGLVSTDVSAVSEYILPKLLDCGMEELVDDTSTHLGNK 594
>G7J9U6_MEDTR (tr|G7J9U6) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_3g105990 PE=3 SV=1
Length = 1237
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/642 (65%), Positives = 480/642 (74%), Gaps = 61/642 (9%)
Query: 1 MGHIGSSKDGIGINLXXXXXXXXXXXXXXXXXXXXXXSSSNAEILKELGEDMVKHFCTKA 60
M HIGSSKD N SNAEIL ELG+DMVK+FC KA
Sbjct: 1 MEHIGSSKDANNTNYTEMDIDLDDDE-----------DQSNAEILNELGDDMVKYFCKKA 49
Query: 61 SRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKF 120
S MFFD++GL+SHQINSYNQFI +GLQ+AFD+FGDL VTP +DPSKKG +EH++YATVKF
Sbjct: 50 SVMFFDQYGLISHQINSYNQFINSGLQSAFDSFGDLTVTPGFDPSKKGADEHYRYATVKF 109
Query: 121 GKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTG 180
GKVTL+RPKFW G NAQE KMLPRHARLQRMTYA+KMKV V +QV+ KVRSDKFKTG
Sbjct: 110 GKVTLERPKFWCGEGNAQELKMLPRHARLQRMTYASKMKVDVHIQVYVMKKVRSDKFKTG 169
Query: 181 KEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEK---- 236
KE+Y GRLPVMV SDLCWM EAEKGDC+FDHGGYFLIKGAEK
Sbjct: 170 KEEYIDKDIKWEDTREITIGRLPVMVKSDLCWMSEAEKGDCEFDHGGYFLIKGAEKLWRL 229
Query: 237 ---------------------------------------------AFVAQEQLFLKKLWV 251
F+AQEQ+FLK+LWV
Sbjct: 230 LVADFDIADVVNGGQYCRFFRHKCATKWSKLQKFGSPPQYAIENTIFIAQEQIFLKRLWV 289
Query: 252 SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVS 311
SN P WA+ +KS KRNR+++KLV S E I NGEK+L+VYFL VE+PVWILFF+LGV+
Sbjct: 290 SNIPYWAVAFKSQMKRNRMVVKLVEGST-EGITNGEKLLTVYFLSVEIPVWILFFALGVT 348
Query: 312 SDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSES 371
SDKEI+DLIDYG + +I+NI F SIR+AD+KC FR+GKNAL ++EE VKG+Q+PP+ES
Sbjct: 349 SDKEIVDLIDYGEANGRIENILFASIREADDKCEAFRRGKNALLFLEERVKGVQFPPAES 408
Query: 372 MEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
++EC N+Y+FP GL RKAR+LAYMVK LLLAYTGRRK DNRDDFRNKR
Sbjct: 409 IDECFNMYVFPNVKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLER 468
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
KVHFAHARKRM KALQRDL G+R+VR IEHYLDASIITNGLQRAFSTGAWTHP+KR+E
Sbjct: 469 EIKVHFAHARKRMGKALQRDLYGEREVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRME 528
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
R SGVVA LGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG
Sbjct: 529 RISGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 588
Query: 552 LVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFLSKK 593
LVKNL+VTG+VST+++ESI PQL DCGMEELVDDTTT L KK
Sbjct: 589 LVKNLAVTGVVSTDVTESILPQLSDCGMEELVDDTTTVLGKK 630
>M5XMB4_PRUPE (tr|M5XMB4) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000410mg PE=4 SV=1
Length = 1200
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/553 (64%), Positives = 427/553 (77%), Gaps = 5/553 (0%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
+ +LGE +K FC +A+ FF+E+GL+SHQINSYN FI G+Q FD+FG++ V P YDP
Sbjct: 43 IHDLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDP 102
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEV 164
SKKG++E ++YA+VKFGKVTL P FWGG+ + +E+KMLPRHARLQ M+YA+KMKV + V
Sbjct: 103 SKKGESE-WRYASVKFGKVTLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITV 161
Query: 165 QVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFD 224
+V+T V SDKFKTGK Y G +PVMV SDLCWMK+ EKGDCDFD
Sbjct: 162 EVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFD 221
Query: 225 HGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
HGGYF+IKGAEK F+AQEQ LK+L ++N + Y+S KR+RLI++LVG SK E I
Sbjct: 222 HGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIE 281
Query: 285 NGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKC 344
EKVL+VYF+ E+PVWI FF+LGVSSD+E+++LIDY +ED I NI F SIRDAD+
Sbjct: 282 GVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLN 341
Query: 345 ----SGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
GFR+GKNAL Y++E ++ +PP ESMEEC++LYLFP GL +KARFL YMVKS
Sbjct: 342 DKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKS 401
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LL AY GRRKCDNRDDFRNKR K H HAR+RM+KALQRDL GDR VRP
Sbjct: 402 LLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRP 461
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
IEHYLDASI+TNG+ RAFSTGAW HP+KR+ER SGVVA +GR NPLQTM ++R+TRQQVQ
Sbjct: 462 IEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQ 521
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGME 580
YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL+ TGLVSTN+ ES+ PQLL CGME
Sbjct: 522 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGME 581
Query: 581 ELVDDTTTFLSKK 593
+LVDDT T L K
Sbjct: 582 KLVDDTFTSLRGK 594
>B9RNV9_RICCO (tr|B9RNV9) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0920920 PE=3 SV=1
Length = 1203
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/549 (64%), Positives = 423/549 (77%), Gaps = 5/549 (0%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
L ++GE +K FC KA+ +FF+E+GL+SHQINSYN FI G+Q AFD+FG+L V P YDP
Sbjct: 51 LTDIGEAKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDP 110
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEV 164
SKKG+NE ++YA+VKFGKV L++P FW GA E KMLPRHARLQ MTY++KMKV V V
Sbjct: 111 SKKGENE-WRYASVKFGKVALEKPTFWSGA---DEHKMLPRHARLQNMTYSSKMKVNVSV 166
Query: 165 QVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFD 224
+V+T VRSDKFKTGK+ Y G LPVMV SDLCWMK AEKGDCDFD
Sbjct: 167 EVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFD 226
Query: 225 HGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
HGGYFLIKGAEK F+AQEQ+ LK+LW+SN W + YKS KRNRLI++LVG S E++
Sbjct: 227 HGGYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVK 286
Query: 285 NGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKC 344
+K L+VYFL E+P+WILFF+LGV+SDKE+IDLI YG+ D +I NIFF SI DADEK
Sbjct: 287 AEKKCLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKT 346
Query: 345 SGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLA 404
GFR+GK AL Y+ ++G ++PP E+ E+ LYLFP L +KARFL YMVK LL A
Sbjct: 347 EGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQA 405
Query: 405 YTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHY 464
Y G+RKC+N D FRNKRF KVH AHAR+RM+KALQ+DL GDRDVRPIEHY
Sbjct: 406 YNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHY 465
Query: 465 LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGK 524
LDASI+TNGL RAFSTGAW+HPYKR+ER SGVVANLGR NPLQTM +LR+TR VQYTGK
Sbjct: 466 LDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGK 525
Query: 525 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVD 584
VGDAR+PHPSHWG+VCFLSTPDGENCGLVKNL+ TGLVS NI E + +L+ GME++ +
Sbjct: 526 VGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPE 585
Query: 585 DTTTFLSKK 593
D+ + L +K
Sbjct: 586 DSHSDLDEK 594
>B9IL57_POPTR (tr|B9IL57) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_737361 PE=3 SV=1
Length = 1160
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/549 (63%), Positives = 415/549 (75%), Gaps = 1/549 (0%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
L ELG++ ++ FC KA+ +FFDE+GL+SHQINSYN FI +GLQ FD+FG++ V P YD
Sbjct: 15 LNELGKETLQSFCKKAASLFFDEYGLISHQINSYNSFINSGLQRVFDSFGEVAVEPGYDS 74
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEV 164
SK+ D E ++ A+V+FGKVTLDRP FWGG ++ E M PRHARLQ MTY+A+MK+ V V
Sbjct: 75 SKQKDGE-WRRASVRFGKVTLDRPSFWGGTSSDAEHNMFPRHARLQNMTYSARMKIHVNV 133
Query: 165 QVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFD 224
QV+T RSDKFKTG + GR+PVMV SDLCW+ EKGDCDFD
Sbjct: 134 QVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCDFD 193
Query: 225 HGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
HGGYFLIKGAEK F+AQEQ+ +K+LW+SN+ W + YKS KRNRLI++LV SK E I
Sbjct: 194 HGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIK 253
Query: 285 NGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKC 344
+K L VYFL E+P+WILFF+LGV SDKE+IDLIDY + D I NIFF SI DADEKC
Sbjct: 254 GEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKC 313
Query: 345 SGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLA 404
FR+ AL Y+++ +K ++PP ES+E+ ++ YLFP + KARFL YMVK LL A
Sbjct: 314 EHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEA 373
Query: 405 YTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHY 464
YTG RKCDNRD FRNKRF KVH +HA +RM+KALQRDL GDRDV PIEHY
Sbjct: 374 YTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHY 433
Query: 465 LDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGK 524
LDASI+TNGL RAFSTGAW HP+K +ER SGVV NLGR NPLQTM +LR+TRQQV YTGK
Sbjct: 434 LDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGK 493
Query: 525 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVD 584
VGDARYPHPSHWG+VCFLSTPDGENCGLVKNL+VTG+VSTNISES+ +L D GME+LVD
Sbjct: 494 VGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDSGMEKLVD 553
Query: 585 DTTTFLSKK 593
DT T L K
Sbjct: 554 DTYTKLDGK 562
>M1D1M7_SOLTU (tr|M1D1M7) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400030880 PE=3 SV=1
Length = 1254
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/554 (60%), Positives = 405/554 (73%), Gaps = 9/554 (1%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
+KELG +++FC KAS FF+++G++SHQI+SYN FI G+Q FD+ G+++V P YDP
Sbjct: 66 IKELGGGFLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDP 125
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGG----AANAQEF-KMLPRHARLQRMTYAAKMK 159
SKKG+ E +K+A+VKFGKVTLDRPKFW G A N +E+ + PRHARLQ MTY+A+
Sbjct: 126 SKKGEGE-WKHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLDLWPRHARLQNMTYSAR-- 182
Query: 160 VTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKG 219
+ VE VFT VRSDKFKTG E + GR+PVMV S+LCWM A++
Sbjct: 183 IIVETHVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRP 242
Query: 220 DCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSK 279
DCDFDHGGYF++KGAEK F+AQEQ+ LK+LWVSN W + Y+S KRNR+ LKL K
Sbjct: 243 DCDFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLK 302
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
E I K LSVYFL E+P+W+LFF+LGVSSD+EI+DLID +DT I NI SI D
Sbjct: 303 HEHIKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHD 361
Query: 340 ADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVK 399
AD+ C FRKGK AL Y++ +K ++PP ES+EEC+ YLFP SGL +KARFL YMVK
Sbjct: 362 ADKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVK 421
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LLL+Y GRRK DNRDDFRNKR + H HA +RM KALQRDL GDR V+
Sbjct: 422 CLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQ 481
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
P+EHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA L RTNPLQ A+LR+TRQQV
Sbjct: 482 PLEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQV 541
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGM 579
YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL+ GLVST + + + L CGM
Sbjct: 542 TYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGM 601
Query: 580 EELVDDTTTFLSKK 593
++LVDD+ T L K
Sbjct: 602 QKLVDDSATSLHGK 615
>K4BJV1_SOLLC (tr|K4BJV1) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc03g110880.2 PE=3 SV=1
Length = 1211
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/560 (58%), Positives = 405/560 (72%), Gaps = 7/560 (1%)
Query: 39 SSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV 98
S + ++KELGE +K+FC KAS FF+++GL+SHQINSYN FI G+Q FD+ G+++V
Sbjct: 46 SHDMVLIKELGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHV 105
Query: 99 TPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGA-----ANAQEFKMLPRHARLQRMT 153
P YDPSK+GD + +K+A+VKFGKVTL+RPKFW G + +LPRHARLQ MT
Sbjct: 106 EPGYDPSKRGDGD-WKHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMT 164
Query: 154 YAAKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM 213
Y+A++ V VQV+T VRSDKFKTG + + GR+PVMV S+LCWM
Sbjct: 165 YSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWM 224
Query: 214 KEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILK 273
+K DC+FDHGGYF++KGAEK F+AQEQL LK+LWVSN P W +GY+ KR R+ +K
Sbjct: 225 NGVDKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIK 284
Query: 274 LVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIF 333
L K E I GEK LSVY L E+P+W+LFF+LGVSSD+E+++LID EDT I NI
Sbjct: 285 LTETLKLEHIKGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNIL 343
Query: 334 FGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARF 393
SI +AD+ C FRKGK AL Y++ +K ++PP ES+EEC+N YLFP SG +KARF
Sbjct: 344 VASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARF 403
Query: 394 LAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLN 453
L YMVK LL ++ GRRK DNRDDFRNKR + H HA +RM KA+QRDL
Sbjct: 404 LGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLY 463
Query: 454 GDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELR 513
GDR V+PIEHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA L RTNPLQ A++R
Sbjct: 464 GDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMR 523
Query: 514 RTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQ 573
++RQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNL+ GLVST I +
Sbjct: 524 KSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLET 583
Query: 574 LLDCGMEELVDDTTTFLSKK 593
L CGM++LVDD +T L K
Sbjct: 584 LFRCGMQKLVDDCSTSLHGK 603
>Q17U53_SOLBU (tr|Q17U53) DNA-directed RNA polymerase, putative OS=Solanum
bulbocastanum GN=SBB1_14t00022 PE=3 SV=1
Length = 1018
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/555 (60%), Positives = 405/555 (72%), Gaps = 9/555 (1%)
Query: 44 ILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYD 103
+ KELG +++FC KAS FF+++G++SHQI+SYN FI G+Q FD+ G+++V P YD
Sbjct: 59 MAKELGGGFLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYD 118
Query: 104 PSKKGDNEHFKYATVKFGKVTLDRPKFWGG----AANAQEF-KMLPRHARLQRMTYAAKM 158
PSKKG+ + +K+A+VKFGKVTLDRPKFW G A N +E+ + PRHARLQ MTY+A+
Sbjct: 119 PSKKGEGD-WKHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLNLWPRHARLQNMTYSAR- 176
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
+ VE VFT VRSDKFKTG E + GR+PVMV S+LCWM A++
Sbjct: 177 -IIVETHVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADR 235
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
DC+FDHGGYF++KGAEK F+AQEQ+ LK+LWVSN W + Y+S KRNR+ LKL
Sbjct: 236 PDCEFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETL 295
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
K E I K LSVYF E+P+W+LFF+LGVSSD+E++DLID +DT I NI SI
Sbjct: 296 KHEHIKGEAKALSVYFFA-EMPIWVLFFALGVSSDREVVDLIDVDIKDTNIINILVASIH 354
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
DAD+ C FRKGK AL Y++ VK ++PP ES+EEC+ YLFP SGL +KARFL YMV
Sbjct: 355 DADKNCEDFRKGKKALAYVDRLVKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMV 414
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LLL+Y GRRK DNRDDFRNKR +VH HA +RM KALQRDL GDR V
Sbjct: 415 KCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQV 474
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+PIEHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA L RTNPLQ A+LR+TRQQ
Sbjct: 475 QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQ 534
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL+ GLVST + + + L CG
Sbjct: 535 VTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCG 594
Query: 579 MEELVDDTTTFLSKK 593
M++LVDD+ T L K
Sbjct: 595 MQKLVDDSATSLHGK 609
>K4CMW1_SOLLC (tr|K4CMW1) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc08g075940.2 PE=3 SV=1
Length = 1213
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/554 (60%), Positives = 403/554 (72%), Gaps = 7/554 (1%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
+KELG +++FC KAS FF+++GL+SHQI+SYN FI G+Q FD+ G+++V P YDP
Sbjct: 50 IKELGGGFLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDP 109
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGG----AANAQEF-KMLPRHARLQRMTYAAKMK 159
SKKG+ E +K+A+VKFG V LDRPKFW G A N +E+ M PRHARLQ MTY+A++
Sbjct: 110 SKKGEGE-WKHASVKFGNVILDRPKFWAGEKYSAYNGEEYLNMWPRHARLQNMTYSARII 168
Query: 160 VTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKG 219
V VQVFT VRSDKFKTG E + GR+PVMV S+LCWM A++
Sbjct: 169 VETHVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRL 228
Query: 220 DCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSK 279
DC+FDHGGYF++KGAEK F+AQEQ+ LK+LWVSN W + Y+S KRNR+ LKL K
Sbjct: 229 DCEFDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLK 288
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
E+I K LSVYFL E+P+W+LFF+LGVSSD+E++DLID +D +I NI SI D
Sbjct: 289 HEQIKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHD 347
Query: 340 ADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVK 399
AD+ C FRKGK AL Y++ +K ++PP ES+EEC+ YLFP SGL +KARFL YMVK
Sbjct: 348 ADKNCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVK 407
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LLL+Y GRRK DNRDDFRNKR +VH HA +RM KALQRDL GDR V
Sbjct: 408 CLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVH 467
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
PIEHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA L RTNPLQ A+LR+TRQQV
Sbjct: 468 PIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQV 527
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGM 579
YTGKVGDARYP+PSHWGKVCFLSTPDGENCGLVKNL+ GLVST + + L CGM
Sbjct: 528 TYTGKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGM 587
Query: 580 EELVDDTTTFLSKK 593
++LVDD T L K
Sbjct: 588 QKLVDDCATSLHGK 601
>Q1L6V6_SOLLC (tr|Q1L6V6) DNA-directed RNA polymerase (Fragment) OS=Solanum
lycopersicum GN=RPD2 PE=2 SV=1
Length = 1123
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/560 (58%), Positives = 403/560 (71%), Gaps = 7/560 (1%)
Query: 39 SSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV 98
S + ++KELGE +K+FC KAS FF+++G +SHQINSYN FI G+Q FD+ G+++V
Sbjct: 46 SHDMVLIKELGESFLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHV 105
Query: 99 TPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGG-----AANAQEFKMLPRHARLQRMT 153
P YDPSK+GD + +K+A+VKFGKVTL+RPKFW G + +LPRHARLQ MT
Sbjct: 106 EPGYDPSKRGDGD-WKHASVKFGKVTLERPKFWAGEKFSVGGGKEYLDLLPRHARLQNMT 164
Query: 154 YAAKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM 213
Y+A++ V VQV+T VRSDKFKTG + + GR+PVMV S+LCWM
Sbjct: 165 YSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWM 224
Query: 214 KEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILK 273
+K DC+FDHGGYF+ KGAEK F+AQEQL LK+LWVSN P W +GY+ KR R+ +K
Sbjct: 225 NGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIK 284
Query: 274 LVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIF 333
L K E I GEK LSVY L E+P+W+LFF+LGVSSD+E+++LID EDT I NI
Sbjct: 285 LTETLKLEHIKGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNIL 343
Query: 334 FGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARF 393
SI +AD+ C FRKGK AL Y++ +K ++PP ES+EEC+N YLFP SG +KARF
Sbjct: 344 VASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARF 403
Query: 394 LAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLN 453
L YMVK LL ++ GRRK DNRDDFRNKR + H HA +RM KA+QRDL
Sbjct: 404 LGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLY 463
Query: 454 GDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELR 513
GDR V+PIEHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA L RTNPLQ A++R
Sbjct: 464 GDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMR 523
Query: 514 RTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQ 573
++RQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNL+ GLVST I +
Sbjct: 524 KSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLET 583
Query: 574 LLDCGMEELVDDTTTFLSKK 593
L CGM++LVDD +T L K
Sbjct: 584 LFRCGMQKLVDDCSTSLHGK 603
>F6H335_VITVI (tr|F6H335) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_04s0008g06580 PE=3 SV=1
Length = 1198
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/555 (58%), Positives = 416/555 (74%), Gaps = 8/555 (1%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
+ +L ++ +K FC K + FF+E+GL+ HQINS+N FI G+Q FD+FG++ V P YDP
Sbjct: 38 IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 97
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQE-FKMLPRHARLQRMTYAAKMKVTVE 163
SK+G+ + ++YA+V+FGKVTL+RP+ W G ++ +E LPRHARLQ MTY+++MK V
Sbjct: 98 SKRGEGD-WRYASVRFGKVTLERPRVWAGESDGKESLNFLPRHARLQNMTYSSRMKAQVH 156
Query: 164 VQVFTPHKVRSDKFKTGKED-YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCD 222
QV+T VRSDK+KTGK++ Y GR+PVMV S+LCWM E+GDC+
Sbjct: 157 FQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCE 216
Query: 223 FDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEE 282
+DHGGYFLIKGAEK F+AQEQ+ LK+LWVS+ P W + Y+ + KR R+ +KL K E
Sbjct: 217 YDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDEN 275
Query: 283 INNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI----R 338
GEKVL+VYF E+P+WILFF+LG SSDKE++DLID+ +D I NI SI R
Sbjct: 276 NRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADR 335
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
+A++K FR+ NA+ ++++ VK ++PP ES++EC++ YLFP SG+ +KARFL YMV
Sbjct: 336 EAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMV 395
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL AYTGRRKCDNRDDFRNKR +VH HA +RM KA+QR+L GDRD+
Sbjct: 396 KCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDL 455
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
RPIE+YLDASIITNGL RAFSTG W+HP+KR+ER SGVVA L RTNPLQ A++R+TRQQ
Sbjct: 456 RPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQ 515
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL++TGLVST + + + +L DCG
Sbjct: 516 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCG 575
Query: 579 MEELVDDTTTFLSKK 593
ME+LVDDT+T LS K
Sbjct: 576 MEKLVDDTSTKLSGK 590
>D7L7Z5_ARALL (tr|D7L7Z5) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_898162 PE=3 SV=1
Length = 1169
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/554 (56%), Positives = 407/554 (73%), Gaps = 10/554 (1%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
L ELGE ++ FC KA+ FF+E GL+SHQ+NSYN FI GL+ F++FG++ V PS+D
Sbjct: 19 LSELGETFLQSFCKKAATSFFEEFGLISHQLNSYNFFIEHGLRNVFESFGEMLVEPSFDV 78
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEV 164
KK D + ++YATVKFG+VT ++P F+ ++ +E + LP HARLQ MTY+A++KV V+V
Sbjct: 79 IKKKDGD-WRYATVKFGEVTFEKPTFF---SDDKELEFLPWHARLQNMTYSARIKVNVQV 134
Query: 165 QVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE-----AEKG 219
+VF V+SDKFKTG+++Y G +PVMV S LC E +KG
Sbjct: 135 EVFKKTVVKSDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVKSVLCKTSEKGKENCKKG 194
Query: 220 DCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSK 279
DC FD GGYF+IKGAEK F+AQEQ+ K+LW+SN+P W + ++S KRNR I++L N K
Sbjct: 195 DCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-WTVSFRSETKRNRFIVRLSENEK 253
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
++ EKVL+VYFL E+PVW+LFF+LGVSSDKE +DLI + D I N SI +
Sbjct: 254 ADDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGVDASITNSLIASIHE 313
Query: 340 ADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVK 399
AD C FR G NAL Y+E +K ++PP+ES+++CL LYLFPG GL +KARFL YMVK
Sbjct: 314 ADAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCLRLYLFPGLQGLKKKARFLGYMVK 373
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LL AY G+RKC+NRD FRNKR +VH AHAR++M++A+Q+ L+G+ +++
Sbjct: 374 CLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKQLSGEGELK 433
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
PIEHYLDAS+ITNGL RAFSTGAW+HP++++ER SGVVANLGR NPLQ++ +LRRTRQQV
Sbjct: 434 PIEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGVVANLGRANPLQSLIDLRRTRQQV 493
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGM 579
YTGKVGDARYPHPSHWG+VCFLSTPDGENCGLVKN+S+ GLVST + ES+ L CGM
Sbjct: 494 LYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQVLESVVEMLYACGM 553
Query: 580 EELVDDTTTFLSKK 593
EEL+DDT+T L K
Sbjct: 554 EELMDDTSTPLCGK 567
>M4E0I2_BRARP (tr|M4E0I2) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra022279 PE=3 SV=1
Length = 1169
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/556 (58%), Positives = 410/556 (73%), Gaps = 12/556 (2%)
Query: 45 LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDP 104
L++LG+ ++ FC KA+ FFDE+GLVSHQ+NSYN FI GLQ+ F++ G++ V PS+DP
Sbjct: 17 LRDLGDPFLQSFCKKAATSFFDEYGLVSHQLNSYNFFIEHGLQSVFESSGEMLVEPSFDP 76
Query: 105 SKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEV 164
+K D+E ++YATVKFG+V++D+P + ++ +E LP HARLQ MTY+A+MKV V+V
Sbjct: 77 TKNKDHE-WRYATVKFGEVSVDKPTLY---SDDKELVFLPWHARLQNMTYSARMKVNVDV 132
Query: 165 QVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA-------E 217
+VF V+ DKFKTG+++Y GR+PVMV S LC E
Sbjct: 133 EVFVKKVVKRDKFKTGQDEYVEKQILSKKTQDIPIGRIPVMVKSVLCNTTEKGKHVESYR 192
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGN 277
KG+C FD GGYF+IKGAEK F+AQEQ+ K+LW+SN+P W + Y+S KRNR I++L N
Sbjct: 193 KGECAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-WTVSYRSETKRNRFIVRLSEN 251
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
K E+ EKVL+VYFL E+PVW+LFF+LGV+SDKE +DLI + D I N SI
Sbjct: 252 QKAEDFKRKEKVLTVYFLSTEIPVWVLFFALGVASDKEAVDLIAFDGGDASITNSVVASI 311
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
++AD C FR G+NAL Y+E+ +KG ++PP ES++ECL+LYLFPG L +KARFL YM
Sbjct: 312 QEADSVCEDFRHGRNALAYVEQQIKGTKFPPGESVDECLSLYLFPGLKSLKQKARFLGYM 371
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
VK L AY G+RKC+NRD+FRNKR +VH AHAR+ M+KA+QR L GD D
Sbjct: 372 VKCLFSAYAGKRKCENRDNFRNKRIELAGELLERELRVHLAHARRTMTKAMQRHLTGDGD 431
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++PIEHYLDASIITNGL RAFSTGAW HP++++ER SGVVANLGR NPLQ++ +LRRTRQ
Sbjct: 432 LKPIEHYLDASIITNGLSRAFSTGAWCHPFRKMERVSGVVANLGRANPLQSLIDLRRTRQ 491
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDC 577
QV YTGKVGDARYPHPSHWG+VCFLSTPDGENCGLVKNLS+ GLVST I E + +L D
Sbjct: 492 QVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLSLLGLVSTQIMEPVVEKLFDS 551
Query: 578 GMEELVDDTTTFLSKK 593
GMEELVDDT+T LS K
Sbjct: 552 GMEELVDDTSTPLSGK 567
>R0GBC5_9BRAS (tr|R0GBC5) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10016327mg PE=4 SV=1
Length = 1161
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/552 (56%), Positives = 401/552 (72%), Gaps = 18/552 (3%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
+LG++ ++ FC KA+ FFD++GL+SHQ+NSYN FI GLQ FD+FG++ V PS+DP+K
Sbjct: 21 DLGQNFLQSFCKKAATSFFDKYGLISHQLNSYNFFIEHGLQNVFDSFGEMLVEPSFDPTK 80
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
K +N +KYA+VKFG+VTL++PKF+ ++ +E + LP HARLQ MTY+A++KV V V+V
Sbjct: 81 KKEN-GWKYASVKFGQVTLEKPKFF---SDDKELEFLPWHARLQNMTYSARIKVNVHVEV 136
Query: 167 FTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE-----AEKGDC 221
FT V+SDKFKTG+++Y G +PVMV S LC E +KGDC
Sbjct: 137 FTKTVVKSDKFKTGQDEYVEKKDLDVKKQDILIGSIPVMVKSILCKTSEKGKENCKKGDC 196
Query: 222 DFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFE 281
FD GGYF+IKGAEK F+AQEQ+ K+LW+SN+P + I++L N K E
Sbjct: 197 AFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPI---------HHGQFIVRLAENQKLE 247
Query: 282 EINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDAD 341
E EKVL+VYFL E+PVW+LFF+LGVSSDKE +DLI + +D I N SI +AD
Sbjct: 248 EYRRREKVLTVYFLSTEIPVWVLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEAD 307
Query: 342 EKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSL 401
GFR G NAL ++E+ +K ++PP+ES+++ L LYLFPG L +KARFL YMVK L
Sbjct: 308 AVKEGFRHGNNALAFVEKQIKDTKFPPAESVDDILRLYLFPGLQSLKKKARFLGYMVKCL 367
Query: 402 LLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPI 461
L AY G+RKC+NRD FRNKR +VH AHAR+ M+KA+Q+ L G+ ++PI
Sbjct: 368 LSAYAGKRKCENRDSFRNKRMELAGELLEREIRVHLAHARRNMTKAMQKHLAGEGVLKPI 427
Query: 462 EHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQY 521
EHYLDASIITNGL RAFSTG W+HP++++ER SGVVANLGR NPLQT+ +LRRTRQQV Y
Sbjct: 428 EHYLDASIITNGLNRAFSTGQWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLY 487
Query: 522 TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEE 581
TGKVGDARYPHPSHWG+VCFLSTPDGENCGLVKN+S+ GLVST I E + + LDCGMEE
Sbjct: 488 TGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQILEPVMEKFLDCGMEE 547
Query: 582 LVDDTTTFLSKK 593
L+DDT+T L K
Sbjct: 548 LMDDTSTPLCGK 559
>M0TR54_MUSAM (tr|M0TR54) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1111
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/542 (53%), Positives = 374/542 (69%), Gaps = 6/542 (1%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +A+R FF E GL++HQI+SYN F+ G+Q FD GD+ V P YDPSKKGD
Sbjct: 52 LEKFCKEAARAFFKEWGLINHQISSYNDFVEHGIQDLFDTLGDVVVEPGYDPSKKGDGA- 110
Query: 113 FKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+++A++ FGKV L++P+FW + +E K+LPRHARLQ MTY+++MKV V VQV+
Sbjct: 111 WRHASITFGKVRLEKPEFWPEKNDIEEGSLKLLPRHARLQNMTYSSQMKVKVRVQVYVQE 170
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
K SDK K G Y GRLPVMV S+LCW+ K DC FD GGYFL
Sbjct: 171 K--SDKAKIGNSSYIQKRVQNDDEGEITIGRLPVMVQSNLCWLSALGKSDCLFDSGGYFL 228
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVL 290
IKG EK F+ QEQ L +LWV + P + Y S KR R+ +KLV K E + G KV+
Sbjct: 229 IKGMEKTFIGQEQRCLTRLWVIDKPVATVSYLSEIKRKRIYVKLVEAPKAEGFHGG-KVI 287
Query: 291 SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKG 350
SVYFL +P+WI+FF+LG SSDKE++++ID + D + NI +I+DADE+ GFR
Sbjct: 288 SVYFLYATMPIWIMFFALGASSDKEVLEMIDLKDCDAGMINIILATIKDADEQFEGFRSL 347
Query: 351 KNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRK 410
A ++ +K ++PPSES +E + YLFP G KA FL YMVK LLL+ G+RK
Sbjct: 348 DKAREHVNALIKNAKFPPSESFDEYVAKYLFPNIIGHRTKAHFLGYMVKCLLLSSFGKRK 407
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
CDN+DDFRNKR + H HA KRM +A+QRDL+GDRD++PIE YLDASII
Sbjct: 408 CDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVRAMQRDLSGDRDLQPIERYLDASII 467
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL RAFSTGAWTHPYK+ ER SG+VA L RTNPLQ M+++R+TRQQV Y GK GDARY
Sbjct: 468 TNGLNRAFSTGAWTHPYKKTERLSGIVATLRRTNPLQMMSDMRKTRQQVAYAGKAGDARY 527
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFL 590
P+PS+WGK+CFLSTPDGENCGLVKNL+VT +VS+ I E I +L+ CGME+L + + + L
Sbjct: 528 PNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKIMEPILDKLIACGMEKLDEISLSSL 587
Query: 591 SK 592
S+
Sbjct: 588 SQ 589
>I1IKY3_BRADI (tr|I1IKY3) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI4G15740 PE=3 SV=1
Length = 1213
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/547 (51%), Positives = 380/547 (69%), Gaps = 6/547 (1%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
SS +I ++ ++ FC +ASR FF+E GL+SHQINSYN+FI+ GLQ FD+ G++
Sbjct: 51 SSMGEQIPADMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVT 110
Query: 98 VTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYA 155
V P YDPSKKG +++A +KFGKV L+ P FW G + E K+ PRHARLQ MTY+
Sbjct: 111 VEPGYDPSKKGPG-GWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYS 169
Query: 156 AKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
+KM+V V +QV++ K SDK KTG + + GRLPVMV SDLCW+ +
Sbjct: 170 SKMEVEVNIQVYSMEK--SDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHK 227
Query: 216 AEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLV 275
+ DC FD GGYFLIKG EK F+AQEQ L ++WV++ P W + Y S KR R+ +KL+
Sbjct: 228 LGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLI 287
Query: 276 GNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
++ ++N G K++S+ FL +P+W+LFF+LGVSSDKE+ D+ID + D + N +
Sbjct: 288 DSTTNNDLN-GAKIISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIYA 346
Query: 336 SIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLA 395
+IR++DE C GFR+ A Y+++ VK ++PP+E + + YLFPG SG K+ FL
Sbjct: 347 TIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKSFFLG 406
Query: 396 YMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGD 455
YMVK LL+A+TG+RKCDN+DDFRNKR + H HA + M KA+QRDLN D
Sbjct: 407 YMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSD 466
Query: 456 RDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRT 515
RD++ YLDASIITNG+ RAF+TG+W+HPY R ER SG+VA L RTNPLQ M++LR++
Sbjct: 467 RDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKS 526
Query: 516 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL 575
RQQV Y GKVGDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + +
Sbjct: 527 RQQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFV 586
Query: 576 DCGMEEL 582
CGM +L
Sbjct: 587 SCGMNKL 593
>M7ZF38_TRIUA (tr|M7ZF38) DNA-directed RNA polymerase D subunit 2a OS=Triticum
urartu GN=TRIUR3_33930 PE=4 SV=1
Length = 1269
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 380/547 (69%), Gaps = 6/547 (1%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
S S+AE+ ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++
Sbjct: 73 SESHAEVPIDMSLGSLEKFCKEASRSFFDEFGLISHQINSYNEFVSHGLQELFDSLGEVT 132
Query: 98 VTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYA 155
V PSYD SKKG +K+A ++FG+V L++P FW G + E K+ PRHARLQ MTY+
Sbjct: 133 VEPSYDLSKKGPG-GWKHAVIRFGRVKLEKPVFWSGRDDVDEESLKLKPRHARLQNMTYS 191
Query: 156 AKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
+KM+V V +Q+++ K SDK KT K+ + GRLPVMV S+LCW++E
Sbjct: 192 SKMEVEVHIQIYSMEK--SDKSKTEKDPFGHKRVLMDETHVVNIGRLPVMVNSNLCWLRE 249
Query: 216 AEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLV 275
+ DC +D GGYFLI+G EK F+AQEQ L ++W+++ P W + Y S KR R+ +KL+
Sbjct: 250 LRESDCLYDSGGYFLIRGMEKIFIAQEQRCLTRIWIADRPVWTVSYLSEIKRRRIYVKLI 309
Query: 276 GNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
++K + + G K++S+ FL +P+W++FF+LGVSSDKE D+ID G+ D + N
Sbjct: 310 DSTKNNDFS-GSKIISISFLYANMPIWLMFFALGVSSDKEAFDMIDMGDCDASVINAISA 368
Query: 336 SIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLA 395
+I ++DE C GFRK A +++ VK ++PP ES ++ + YLFPG G KA FL
Sbjct: 369 TISESDELCEGFRKSDKARQCVDDLVKSSKFPPGESFDDYIAKYLFPGIKGNRNKALFLG 428
Query: 396 YMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGD 455
YMVK LL+A+TG+R+CDN+DDFRNKR + H HA + M KA+QRDLN D
Sbjct: 429 YMVKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSD 488
Query: 456 RDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRT 515
RD+ YLDASIITNG+ RAF+TG+W HPYKR ER SG+VA L RTNPLQ M++LR++
Sbjct: 489 RDLEFPTRYLDASIITNGINRAFATGSWCHPYKRNERCSGIVATLRRTNPLQMMSDLRKS 548
Query: 516 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL 575
RQQV Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ +++ + + +
Sbjct: 549 RQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVAQPLIDRFV 608
Query: 576 DCGMEEL 582
CGM +L
Sbjct: 609 SCGMNKL 615
>I1HCX0_BRADI (tr|I1HCX0) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI2G05777 PE=3 SV=1
Length = 1213
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/547 (51%), Positives = 378/547 (69%), Gaps = 6/547 (1%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
SS +I ++ ++ FC +ASR FF+E GL+SHQINSYN+F++ GLQ FD+ G++
Sbjct: 51 SSMGEQIPADMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFVSHGLQELFDSLGEVT 110
Query: 98 VTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYA 155
V P YDPSKKG +++A +KFGKV L+ P FW G E K+ PRHARLQ MTY+
Sbjct: 111 VEPGYDPSKKGPG-GWRHAIIKFGKVKLEEPVFWSGKIGIDEESLKLKPRHARLQNMTYS 169
Query: 156 AKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
+KM+V V +QV++ K SDK KTG + + GRLPVMV SDLCW+ +
Sbjct: 170 SKMEVEVNIQVYSMEK--SDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHK 227
Query: 216 AEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLV 275
+ DC FD GGYFLIKG EK F+AQEQ L ++WV++ P W + Y S KR R+ +KL+
Sbjct: 228 LGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADRPCWNVSYLSEMKRRRVYIKLI 287
Query: 276 GNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
++ ++N G K++S+ FL +P+W+LFF+LGVSSDKE+ D+ID + D + N
Sbjct: 288 DSTTNNDLN-GAKIISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAISA 346
Query: 336 SIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLA 395
+IR++DE C GFR+ A Y+++ VK ++PP+E + + YLFPG SG KA FL
Sbjct: 347 TIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKAFFLG 406
Query: 396 YMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGD 455
YMVK LL+A+TG+RKCDN+DDFRNKR + H HA + M KA+QRDLN D
Sbjct: 407 YMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSD 466
Query: 456 RDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRT 515
RD++ YLDASIITNG+ RAF+TG+W+HPY R ER SG+VA L RTNPLQ M++LR++
Sbjct: 467 RDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKS 526
Query: 516 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL 575
RQQV Y GKVGDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + +
Sbjct: 527 RQQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFV 586
Query: 576 DCGMEEL 582
CGM +L
Sbjct: 587 SCGMNKL 593
>K3Y4R3_SETIT (tr|K3Y4R3) DNA-directed RNA polymerase OS=Setaria italica
GN=Si009201m.g PE=3 SV=1
Length = 1234
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/544 (50%), Positives = 382/544 (70%), Gaps = 9/544 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SN I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ GD+ V
Sbjct: 82 SNVPI--DMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQKLFDSLGDVIVE 139
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK PRHARLQ MTYA+++
Sbjct: 140 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWSGKDEVDIDFK--PRHARLQNMTYASRI 196
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
KV V ++V++ K SDK KTG +D+ GRLPVMV S+LC + ++
Sbjct: 197 KVEVTIKVYSLEK--SDKSKTGNDDFVQKRDFMNETHWIYIGRLPVMVKSNLCLLHNLKE 254
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
DC FD GGYFL+KG EK F+AQEQ L +LW+S+ P W + + S KR R+ +KLV ++
Sbjct: 255 SDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPCWTVSFMSEIKRRRIYIKLVEST 314
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
K ++ + G K++S+ FL +P+W++FF+LG+SSDKE+ D+ID + D + N +I+
Sbjct: 315 KSDDFS-GSKIISISFLYATMPIWLMFFALGISSDKEVFDVIDMQDGDASVINTISATIK 373
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++DE C GFRK A Y++E VK ++PP+ES ++ ++ +LFP SG KA FL YMV
Sbjct: 374 ESDELCEGFRKSDKARQYVDELVKNSRFPPAESFDDYVDRFLFPDISGHRNKALFLGYMV 433
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + H A +RM KA+QRDLN DR++
Sbjct: 434 KCLLMAFTGKRKCDNKDDFRNKRLDLAGELLARELRAHIRLAERRMVKAIQRDLNSDREL 493
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E YLDASI+TNGL RAFSTG+W HPYK+ ER SG+VA L RTNPLQ +++LR+TRQ+
Sbjct: 494 QDLERYLDASIVTNGLNRAFSTGSWCHPYKKTERCSGIVATLRRTNPLQMISDLRKTRQR 553
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 554 VAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVEQPLIESFISCG 613
Query: 579 MEEL 582
M +L
Sbjct: 614 MSKL 617
>J3M1V4_ORYBR (tr|J3M1V4) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB04G33790 PE=3 SV=1
Length = 1254
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/556 (49%), Positives = 384/556 (69%), Gaps = 9/556 (1%)
Query: 39 SSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV 98
+S+A+I ++ ++ FC +ASR FFDE GL+SHQINSYN F+A GLQ FD+ G++ V
Sbjct: 73 NSHAQIPIDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELFDSLGEVTV 132
Query: 99 TPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAA 156
PSYDPS +G +++A +KFG+V L+ P FW G + + K+ PRHARLQ MTY++
Sbjct: 133 EPSYDPSNRGPG-GWRHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARLQNMTYSS 191
Query: 157 KMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA 216
KMKV V +QV++ K SDK KTG + + GRLPVMVMS+LCW+ +
Sbjct: 192 KMKVEVHIQVYSMEK--SDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLCWLHKL 249
Query: 217 EKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVG 276
++ DC FD GGYFLIKG EK F+AQEQ L ++WV P W + + S +R R+ +KL+
Sbjct: 250 KESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIYIKLID 309
Query: 277 NSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS 336
++K N K++S+ FL +P+W++FF+LG++SDK++ D+ID + D + N +
Sbjct: 310 STK----NEDRKIISISFLYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISAT 365
Query: 337 IRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAY 396
I+++DE C GFRK A Y++E +K ++PP E ++ + YLFPG SG KA FL Y
Sbjct: 366 IKESDELCEGFRKSDRARQYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLGY 425
Query: 397 MVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDR 456
MVK LL+A+TG+RKCDN+DDFRNKR + H HA + M KALQRDLN DR
Sbjct: 426 MVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSDR 485
Query: 457 DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTR 516
+++ ++ YLDASIITNGL RAFSTG+W HPYK+ ER +G+VA L RTNPLQ +++LR+TR
Sbjct: 486 ELQELDRYLDASIITNGLNRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKTR 545
Query: 517 QQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
Q+V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ +++ + + +
Sbjct: 546 QRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFIS 605
Query: 577 CGMEELVDDTTTFLSK 592
CGM +L + T + K
Sbjct: 606 CGMNKLHEIPTEEVPK 621
>B8AV78_ORYSI (tr|B8AV78) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_17620 PE=3 SV=1
Length = 1177
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/545 (50%), Positives = 379/545 (69%), Gaps = 6/545 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 70 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 129
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 130 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 188
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 189 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 246
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGN 277
+ DC FD GGYFLIKG EK F+AQEQ L ++WV + P W + + S +R R+ +KL+ +
Sbjct: 247 ESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDS 306
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ E+ + G K++S+ FL +P+W++FF+LG+SSDK+I D+I+ + D + N +I
Sbjct: 307 ANNEDASGG-KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATI 365
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+++DE C GFRK A Y++E +K ++PP+E ++ + YLFP SG KA FL YM
Sbjct: 366 KESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYM 425
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
VK LL+A+TG+RKCDN+DDFRNKR + H HA + M KALQRDLN +R+
Sbjct: 426 VKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERE 485
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ +HYLDASIITNGL RAFSTG+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ
Sbjct: 486 LQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQ 545
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDC 577
+V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT VS+ ++ + + + C
Sbjct: 546 RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISC 605
Query: 578 GMEEL 582
GM +L
Sbjct: 606 GMNKL 610
>B9FCT0_ORYSJ (tr|B9FCT0) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_16357 PE=3 SV=1
Length = 1185
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/545 (50%), Positives = 379/545 (69%), Gaps = 6/545 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 70 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 129
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 130 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 188
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 189 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 246
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGN 277
+ DC FD GGYFLIKG EK F+AQEQ L ++WV + P W + + S +R R+ +KL+ +
Sbjct: 247 ESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDS 306
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ E+ + G K++S+ FL +P+W++FF+LG+SSDK+I D+I+ + D + N +I
Sbjct: 307 ANNEDASGG-KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATI 365
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+++DE C GFRK A Y++E +K ++PP+E ++ + YLFP SG KA FL YM
Sbjct: 366 KESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYM 425
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
VK LL+A+TG+RKCDN+DDFRNKR + H HA + M KALQRDLN +R+
Sbjct: 426 VKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERE 485
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ +HYLDASIITNGL RAFSTG+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ
Sbjct: 486 LQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQ 545
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDC 577
+V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT VS+ ++ + + + C
Sbjct: 546 RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISC 605
Query: 578 GMEEL 582
GM +L
Sbjct: 606 GMNKL 610
>Q0J9N2_ORYSJ (tr|Q0J9N2) DNA-directed RNA polymerase (Fragment) OS=Oryza sativa
subsp. japonica GN=Os04g0641000 PE=2 SV=1
Length = 1270
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/545 (50%), Positives = 379/545 (69%), Gaps = 6/545 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 88 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 147
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 148 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 206
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 207 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 264
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGN 277
+ DC FD GGYFLIKG EK F+AQEQ L ++WV + P W + + S +R R+ +KL+ +
Sbjct: 265 ESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDS 324
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ E+ + G K++S+ FL +P+W++FF+LG+SSDK+I D+I+ + D + N +I
Sbjct: 325 ANNEDASGG-KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATI 383
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+++DE C GFRK A Y++E +K ++PP+E ++ + YLFP SG KA FL YM
Sbjct: 384 KESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYM 443
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
VK LL+A+TG+RKCDN+DDFRNKR + H HA + M KALQRDLN +R+
Sbjct: 444 VKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERE 503
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ +HYLDASIITNGL RAFSTG+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ
Sbjct: 504 LQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQ 563
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDC 577
+V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT VS+ ++ + + + C
Sbjct: 564 RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISC 623
Query: 578 GMEEL 582
GM +L
Sbjct: 624 GMNKL 628
>Q7F9D6_ORYSJ (tr|Q7F9D6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0063C18.1 PE=2 SV=1
Length = 1316
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/545 (50%), Positives = 379/545 (69%), Gaps = 6/545 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 134 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 193
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 194 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 252
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 253 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 310
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGN 277
+ DC FD GGYFLIKG EK F+AQEQ L ++WV + P W + + S +R R+ +KL+ +
Sbjct: 311 ESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDS 370
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ E+ + G K++S+ FL +P+W++FF+LG+SSDK+I D+I+ + D + N +I
Sbjct: 371 ANNEDASGG-KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATI 429
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+++DE C GFRK A Y++E +K ++PP+E ++ + YLFP SG KA FL YM
Sbjct: 430 KESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYM 489
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
VK LL+A+TG+RKCDN+DDFRNKR + H HA + M KALQRDLN +R+
Sbjct: 490 VKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERE 549
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ +HYLDASIITNGL RAFSTG+W HPYKR ER +G+VA L RTNPLQ +++LR+TRQ
Sbjct: 550 LQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQ 609
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDC 577
+V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT VS+ ++ + + + C
Sbjct: 610 RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISC 669
Query: 578 GMEEL 582
GM +L
Sbjct: 670 GMNKL 674
>K7TP19_MAIZE (tr|K7TP19) DNA-directed RNA polymerase OS=Zea mays
GN=ZEAMMB73_190739 PE=3 SV=1
Length = 2163
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/541 (50%), Positives = 375/541 (69%), Gaps = 7/541 (1%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V P YDPSKKG
Sbjct: 1021 LEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGS- 1079
Query: 113 FKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHK 171
+K+A +KFG+V L++P FW G +FK P HARLQ MTYA++++V V +QV++ K
Sbjct: 1080 WKHAIIKFGRVKLEKPVFWTGKDEVSVDFK--PWHARLQNMTYASRLRVEVTIQVYSLEK 1137
Query: 172 VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLI 231
SDK KTG + + G LPVMV S+LC + ++ +C FD GGYFL+
Sbjct: 1138 --SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFDAGGYFLV 1195
Query: 232 KGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLS 291
KG EK F+AQE L++LW+S+ P W I + S KR R+ +KLV +++ E+ + G K++S
Sbjct: 1196 KGMEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRRRIYIKLVESTRSEDFS-GSKIIS 1254
Query: 292 VYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGK 351
+ FL +PVW+LFF+LG+SSDKE D+ID + D + N +I+++DE C GFRK
Sbjct: 1255 ISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELCGGFRKSD 1314
Query: 352 NALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKC 411
A Y++E VK ++PP ES ++ + +LFPG SG KA FL YMVK LL+A+TG+RKC
Sbjct: 1315 KARQYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYMVKCLLMAFTGKRKC 1374
Query: 412 DNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIIT 471
DN+DDFRNKR + H A +RM KA+QRDLN DR+++ +E Y+DASI+T
Sbjct: 1375 DNKDDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRELQDLERYIDASIVT 1434
Query: 472 NGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYP 531
NGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+V Y GK GDARYP
Sbjct: 1435 NGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYP 1494
Query: 532 HPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFLS 591
+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CGM +L D T +
Sbjct: 1495 NPSYWGKLCFMSTPDGENCGLVKNLAVTSIVSSKVVQPLIESFISCGMNKLNDIPTEHIQ 1554
Query: 592 K 592
+
Sbjct: 1555 R 1555
>C5Y8Y9_SORBI (tr|C5Y8Y9) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb06g030300 PE=3 SV=1
Length = 1239
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 380/554 (68%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 86 SNAPI--DMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 143
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 144 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 200
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
KV V +QV++ K SDK KTG E + G LPVMV S+LC + ++
Sbjct: 201 KVEVTIQVYSLEK--SDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKE 258
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQEQ LK+LWVS+ P W I + KR R+ +KLV ++
Sbjct: 259 SECLFDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRRIYIKLVEST 318
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + G KV+S+ FL +PVW+LFF+LG+SSDKE D+ID + D + N +I+
Sbjct: 319 RSEDFS-GSKVISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIK 377
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++DE C GFRK A Y++E VK ++PP+ES ++ + +LFP +G KA FL YMV
Sbjct: 378 ESDELCKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYMV 437
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + +RM KA+QRDLN DR++
Sbjct: 438 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDREL 497
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 498 QDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 557
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CFLSTPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 558 VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQPLIESFISCG 617
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 618 MSKLNDIPTEHIQR 631
>C5WRS0_SORBI (tr|C5WRS0) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb01g042100 PE=3 SV=1
Length = 1228
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/554 (50%), Positives = 379/554 (68%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I +L + ++ FC +ASR FFDE GL+SHQINSYN F++ GLQ FD+ G++ V
Sbjct: 75 SNAPI--DLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSLGEVIVE 132
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 133 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 189
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + ++
Sbjct: 190 IVEVNIQVYSLEK--SDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLCLLHSLKE 247
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQE LK+LW+ + P W I + S KR R+ +KLV ++
Sbjct: 248 SECLFDAGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIYIKLVEST 307
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + G K++S+ FL +PVW+LFF+LG+SSDKE D+ID + D + N +I+
Sbjct: 308 RSEDFS-GSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIK 366
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++DE C GFRK A Y++E VK ++PP+ES ++ + +LFP SG KA FL YMV
Sbjct: 367 ESDELCEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMV 426
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + H A KRM KA+QRDLN DR++
Sbjct: 427 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDREL 486
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 487 QDLERYIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 546
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 547 VAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCG 606
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 607 MSKLNDIPTEHIQR 620
>M8BTF6_AEGTA (tr|M8BTF6) DNA-directed RNA polymerase II subunit RPB2 OS=Aegilops
tauschii GN=F775_01648 PE=4 SV=1
Length = 1324
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/583 (47%), Positives = 382/583 (65%), Gaps = 40/583 (6%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
S S+AE+ ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++
Sbjct: 73 SESHAEVPIDMSLGSLEKFCKEASRSFFDEFGLISHQINSYNEFVSHGLQELFDSLGEVT 132
Query: 98 VTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYA 155
V PSYD SKKG +K+A ++FG+V L++P FW G + E K+ PRHARLQ MTY+
Sbjct: 133 VEPSYDLSKKGPG-GWKHAVIRFGRVKLEKPVFWSGRDDVDEESLKLKPRHARLQNMTYS 191
Query: 156 AKMKVTVEVQVFTP---HKV---------------------------------RSDKFKT 179
+KM+V V +Q +P H++ +SDK KT
Sbjct: 192 SKMEVEVHIQQNSPLTEHEMEQSRNKWLLDVPRLAQQSATYVVVDITHIYSMEKSDKSKT 251
Query: 180 GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFV 239
K+ + GRLPVMV S+LCW++E + DC +D GGYFLI+G EK F+
Sbjct: 252 EKDPFGHKRVLMDETHVVNIGRLPVMVNSNLCWLRELRESDCLYDSGGYFLIRGMEKIFI 311
Query: 240 AQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEV 299
AQEQ L ++W+++ P W + Y S KR R+ +KL+ ++K + + G K++S+ FL +
Sbjct: 312 AQEQRCLTRIWIADRPVWTVSYLSEIKRRRIYVKLIDSTKNNDFS-GSKIISISFLYANL 370
Query: 300 PVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEE 359
P+W++FF+LGVSSDKE D+ID G+ D + N +I ++DE C GFRK A +++
Sbjct: 371 PIWLMFFALGVSSDKEAFDMIDMGDCDASVINAISATISESDELCEGFRKSDKARQCVDD 430
Query: 360 HVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 419
VK ++PP ES ++ + YLFPG G KA FL YMVK LL+A+TG+R+CDN+DDFRN
Sbjct: 431 KVKSSKFPPGESFDDYIAKYLFPGIKGNRNKALFLGYMVKCLLMAFTGKRRCDNKDDFRN 490
Query: 420 KRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 479
KR + H HA + M KA+QRDLN DRD+ YLDASIITNG+ RAF+
Sbjct: 491 KRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLEFPMRYLDASIITNGINRAFA 550
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG+W HPY+R ER SG+VA L RTNPLQ M++LR++RQQV Y GK GDARYP+PS+WGK+
Sbjct: 551 TGSWCHPYRRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNPSYWGKM 610
Query: 540 CFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
CF+STPDGENCGLVKNL+VT +VS+ +++ + + + CGM +L
Sbjct: 611 CFMSTPDGENCGLVKNLAVTAIVSSRVAQPLIDRFVSCGMNKL 653
>D2WKI1_MAIZE (tr|D2WKI1) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 1094
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 379/554 (68%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 76 SNAPI--DMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 133
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 134 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 190
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + +
Sbjct: 191 IVEVTIQVYSLEK--SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNE 248
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQEQ L++LW+S+ P W I + S KR R+ +KLV ++
Sbjct: 249 SECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVEST 308
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + K++++ FL +PVW+LFF+LG+SSDKE+ D+ID + D + N +I+
Sbjct: 309 RSEDFSES-KIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIK 367
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++D+ C FRK A Y++E VK ++PP+ES ++ + +LFP SG KA FL YMV
Sbjct: 368 ESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMV 427
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + A KRM KA+QRDLN DR++
Sbjct: 428 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDREL 487
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 488 QDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 547
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 548 VAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCG 607
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 608 MSKLNDIPTEHIQR 621
>Q7XTQ7_ORYSJ (tr|Q7XTQ7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBb0079B02.6 PE=3 SV=2
Length = 1343
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/572 (47%), Positives = 379/572 (66%), Gaps = 33/572 (5%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 134 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 193
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 194 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 252
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 253 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 310
Query: 218 KGDCDFDHGGYFLIKGAEK---------------------------AFVAQEQLFLKKLW 250
+ DC FD GGYFLIKG EK F+AQEQ L ++W
Sbjct: 311 ESDCQFDSGGYFLIKGMEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIW 370
Query: 251 VSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGV 310
V + P W + + S +R R+ +KL+ ++ E+ + G K++S+ FL +P+W++FF+LG+
Sbjct: 371 VEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGG-KIISISFLYANMPIWLMFFALGI 429
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSE 370
SSDK+I D+I+ + D + N +I+++DE C GFRK A Y++E +K ++PP+E
Sbjct: 430 SSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAE 489
Query: 371 SMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXX 430
++ + YLFP SG KA FL YMVK LL+A+TG+RKCDN+DDFRNKR
Sbjct: 490 PFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLG 549
Query: 431 XXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRL 490
+ H HA + M KALQRDLN +R+++ +HYLDASIITNGL RAFSTG+W HPYKR
Sbjct: 550 RELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRN 609
Query: 491 ERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 550
ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+CF+STPDGENC
Sbjct: 610 ERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENC 669
Query: 551 GLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
GLVKNL+VT VS+ ++ + + + CGM +L
Sbjct: 670 GLVKNLAVTATVSSRVAPPLIDRFISCGMNKL 701
>D2WKH8_MAIZE (tr|D2WKH8) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 1229
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 379/554 (68%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 76 SNAPI--DMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 133
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 134 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 190
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + +
Sbjct: 191 IVEVTIQVYSLEK--SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNE 248
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQEQ L++LW+S+ P W I + S KR R+ +KLV ++
Sbjct: 249 SECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVEST 308
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + K++++ FL +PVW+LFF+LG+SSDKE+ D+ID + D + N +I+
Sbjct: 309 RSEDFSES-KIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIK 367
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++D+ C FRK A Y++E VK ++PP+ES ++ + +LFP SG KA FL YMV
Sbjct: 368 ESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMV 427
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + A KRM KA+QRDLN DR++
Sbjct: 428 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDREL 487
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 488 QDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 547
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 548 VAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCG 607
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 608 MSKLNDIPTEHIQR 621
>Q259Y6_ORYSA (tr|Q259Y6) DNA-directed RNA polymerase OS=Oryza sativa
GN=B0414F07.4 PE=3 SV=1
Length = 1343
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/572 (47%), Positives = 379/572 (66%), Gaps = 33/572 (5%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
S A+I ++ ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 134 SYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVE 193
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAK 157
PSYDPS +G +++A +KFG+V L+ P FW G + Q K+ PRHARLQ MTY++K
Sbjct: 194 PSYDPSNRGPG-GWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSK 252
Query: 158 MKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
MKV V QV++ K SDK KTG + + GRLPVMVMS+LCW+ + +
Sbjct: 253 MKVEVHFQVYSMEK--SDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLK 310
Query: 218 KGDCDFDHGGYFLIKGAEK---------------------------AFVAQEQLFLKKLW 250
+ DC FD GGYFLIKG EK F+AQEQ L ++W
Sbjct: 311 ESDCQFDSGGYFLIKGMEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIW 370
Query: 251 VSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGV 310
V + P W + + S +R R+ +KL+ ++ E+ + G K++S+ FL +P+W++FF+LG+
Sbjct: 371 VEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGG-KIISISFLYANMPIWLMFFALGI 429
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSE 370
SSDK+I D+I+ + D + N +I+++DE C GFRK A Y++E +K ++PP+E
Sbjct: 430 SSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAE 489
Query: 371 SMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXX 430
++ + YLFP SG KA FL YMVK LL+A+TG+RKCDN+DDFRNKR
Sbjct: 490 PFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLG 549
Query: 431 XXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRL 490
+ H HA + M KALQRDLN +R+++ +HYLDASIITNGL RAFSTG+W HPYKR
Sbjct: 550 RELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRN 609
Query: 491 ERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 550
ER +G+VA L RTNPLQ +++LR+TRQ+V Y GK GDARYP+PS+WGK+CF+STPDGENC
Sbjct: 610 ERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENC 669
Query: 551 GLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
GLVKNL+VT VS+ ++ + + + CGM +L
Sbjct: 670 GLVKNLAVTATVSSRVAPPLIDRFISCGMNKL 701
>I1J2F6_BRADI (tr|I1J2F6) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI5G23540 PE=3 SV=1
Length = 1236
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/548 (49%), Positives = 371/548 (67%), Gaps = 7/548 (1%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
S S+ E ++ ++ FC +ASR FFDE GL+SHQINSYN FI+ GLQ FD+ G++
Sbjct: 73 SESHEEFPIDMSLTSLEKFCKEASRSFFDEIGLISHQINSYNDFISHGLQELFDSLGEVT 132
Query: 98 VTPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAAN---AQEFKMLPRHARLQRMTY 154
V PSYDPSKKG +++A +KFGKV L P FW + K+ PRHARLQ MTY
Sbjct: 133 VEPSYDPSKKGPG-GWRHAIIKFGKVKLQEPVFWSDKCEDKYEEALKLKPRHARLQNMTY 191
Query: 155 AAKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMK 214
++KM+V + +QV++ K SDK KT + + GRLPVMV S+LCW+
Sbjct: 192 SSKMEVEMNIQVYSMEK--SDKAKTENDHFGHKRDIINETHWVSVGRLPVMVNSNLCWLH 249
Query: 215 EAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKL 274
+ + DC FD GGYFLIKG EK F+AQEQ L ++WV + P W + Y S KR R +KL
Sbjct: 250 KLGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVDDRPCWTVSYMSEIKRKRTYVKL 309
Query: 275 VGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFF 334
+ ++K + + K++S+ FL +PVW++FF+LG+SSDKE+ D+ID+ + D + N+
Sbjct: 310 IDSTKSNDFSES-KIISISFLYANMPVWLMFFALGISSDKEVFDIIDFKDSDASVINMIS 368
Query: 335 GSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFL 394
+I +++E C GFRK A Y+++ VK ++PP+ES ++ + +LFPG SG KA FL
Sbjct: 369 ATISESNELCEGFRKSDKARQYVDDLVKSSKFPPAESFDDYVARFLFPGISGNRNKAFFL 428
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YMVK LL+A+TG+ KCDNRD FRNKR + H HA + M KA+QRDLN
Sbjct: 429 GYMVKYLLMAFTGKLKCDNRDAFRNKRLELPGELLGRELRAHLRHAERLMVKAMQRDLNS 488
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
DRD++ YLD +IITNG+ RAF+TG+W HPYKR ER SGVVA L RTNPLQ M++LR+
Sbjct: 489 DRDLQFPLGYLDPTIITNGINRAFATGSWCHPYKRNERCSGVVATLRRTNPLQMMSDLRK 548
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
+RQQV Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + +
Sbjct: 549 SRQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRF 608
Query: 575 LDCGMEEL 582
+ CGM +L
Sbjct: 609 VSCGMNKL 616
>D2WKI0_MAIZE (tr|D2WKI0) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 1229
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/554 (49%), Positives = 378/554 (68%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 76 SNAPI--DMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 133
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 134 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 190
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + +
Sbjct: 191 IVEVTIQVYSLEK--SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNE 248
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQEQ L++LW+S+ P W I + S KR R+ +KLV ++
Sbjct: 249 SECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVEST 308
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + K++++ FL +PVW+LFF+LG+SSDKE+ D+ID + D + N +I+
Sbjct: 309 RSEDFSES-KIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIK 367
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++D+ C FRK A Y++E VK ++PP+ES ++ + +LFP SG KA FL YMV
Sbjct: 368 ESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMV 427
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + A KRM KA+QRDLN DR++
Sbjct: 428 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDREL 487
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 488 QDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 547
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+W K+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 548 VAYAGKAGDARYPNPSYWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCG 607
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 608 MSKLNDIPTEHIQR 621
>Q07DU9_MAIZE (tr|Q07DU9) DNA-directed RNA polymerase (Fragment) OS=Zea mays
GN=RPD2 PE=2 SV=1
Length = 1170
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/554 (49%), Positives = 375/554 (67%), Gaps = 9/554 (1%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + + FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 17 SNAPI--DMSVESLGKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 74
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 75 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 131
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + +
Sbjct: 132 IVEVTIQVYSLEK--SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNE 189
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNS 278
+C FD GGYFL+KG EK F+AQEQ L++LW+S+ P W I + S KR R+ +KLV ++
Sbjct: 190 SECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVEST 249
Query: 279 KFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIR 338
+ E+ + K++++ FL +PVW+ F+LG+SSDKE+ D+I + D + N +I+
Sbjct: 250 RSEDFSES-KIITISFLYATMPVWLXXFALGISSDKEVFDMIXMQDCDASVINTISATIK 308
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMV 398
++D+ C FRK A Y++E VK ++PP+ES ++ + +LFP SG KA FL YMV
Sbjct: 309 ESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMV 368
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
K LL+A+TG+RKCDN+DDFRNKR + A KRM KA+QRDLN DR++
Sbjct: 369 KCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDREL 428
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ +E Y+DASI+TNGL RAFSTG+W HPYKR ER SG+VA L RTNPLQ M++LR+TRQ+
Sbjct: 429 QDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQR 488
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCG 578
V Y GK GDARYP+PS+WGK+CF+STPDGENCGLVKNL+VT +VS+ + + + + CG
Sbjct: 489 VAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCG 548
Query: 579 MEELVDDTTTFLSK 592
M +L D T + +
Sbjct: 549 MSKLNDIPTEHIQR 562
>I1I174_BRADI (tr|I1I174) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI3G15852 PE=3 SV=1
Length = 1242
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/533 (50%), Positives = 363/533 (68%), Gaps = 9/533 (1%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +A+R FF E GLVSHQINSYN FI+ GLQ D+ G++ V P YDPSKK +
Sbjct: 93 LEKFCKEAARSFFSETGLVSHQINSYNDFISHGLQELIDSVGEITVEPDYDPSKKAEAGA 152
Query: 113 FKYATVKFGKVTLDRPKFWGGAANAQE--FKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+++AT+KFG+V + P FW E K+ P+HARLQ MTY++KM V + VQV++
Sbjct: 153 WRHATIKFGRVKFEEPVFWVEDTELDEHTLKLKPKHARLQNMTYSSKMFVEMTVQVYS-- 210
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
++SDK K GK Y GRLPVMV S+LCW+ + +K DC FD+GGYFL
Sbjct: 211 LMQSDKSKIGKNPYIQKRDILNETKWVSIGRLPVMVKSNLCWLHKLQKTDCQFDYGGYFL 270
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVL 290
IKG EKAFVA+EQ L ++W+ + P W Y S NKR R+ +KLV + EE + K++
Sbjct: 271 IKGMEKAFVAEEQRCLSRIWIKDHPSWDASYMSQNKRERIYVKLV---QSEESHGLRKLV 327
Query: 291 SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKG 350
++FLG +P+WI+FF+LGVSSDKE D+ID + D + NI +I+++DE+C GFR+G
Sbjct: 328 RLFFLGATMPIWIMFFALGVSSDKEAFDMIDIQDCDASLVNIISATIKESDEQCEGFRRG 387
Query: 351 KNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNR-KARFLAYMVKSLLLAYTGRR 409
A Y++E +K ++PP +S + + Y+FPG NR KA FL YMVK LL+AY+G R
Sbjct: 388 GRARQYVDEFIKKTKFPPEQSFDGYVGRYMFPGDVSDNRSKAFFLGYMVKCLLMAYSGHR 447
Query: 410 KCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASI 469
KCD+R +FRNKR VH HA++RM K +QR L+GD D++ ++HY+D SI
Sbjct: 448 KCDDRANFRNKRLDLACQLLRRELWVHLRHAQRRMVKIMQRHLSGDGDLQVLDHYVDTSI 507
Query: 470 ITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDAR 529
+TNGL RAFSTG+W HPYK ER SG+V NL RTNPLQ M++LR+TRQ Y G GDAR
Sbjct: 508 VTNGLNRAFSTGSWCHPYK-YERCSGIVGNLRRTNPLQMMSDLRKTRQLSAYFGNAGDAR 566
Query: 530 YPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
YP+PS+WGK+CFLSTPDGE CG VKNL+VT +VS+ + + + + CGM++L
Sbjct: 567 YPNPSYWGKLCFLSTPDGEKCGFVKNLAVTAVVSSVMRKPLMDLFVSCGMKKL 619
>Q1L6W5_RHOMC (tr|Q1L6W5) DNA-directed RNA polymerase (Fragment) OS=Rhododendron
macrophyllum GN=RPD2 PE=2 SV=1
Length = 1019
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 309/394 (78%), Gaps = 1/394 (0%)
Query: 200 GRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAI 259
GR+PVM+ SDLCWM EK DCDFDHGGYFLIKGAEK F+AQEQ+ LK+LWVSN+P W +
Sbjct: 18 GRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQEQICLKRLWVSNSPSWTV 77
Query: 260 GYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDL 319
Y+ ++KR R+ +KL K E I GEKVLSVYF VE P+WILFF+LG SSDKE+++L
Sbjct: 78 AYRDVSKRKRVYIKL-EPPKREHIRGGEKVLSVYFSAVEFPIWILFFALGASSDKEVVNL 136
Query: 320 IDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY 379
ID ED++I N+ SI DADE C GFR+G+NA++ + + ++ ++PP ES+E L+ Y
Sbjct: 137 IDCDGEDSRIVNVLIASIYDADENCKGFRRGRNAINDIMKKIENCKFPPQESIEAFLSNY 196
Query: 380 LFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAH 439
LFP SG +KARFL YMVK LL AYTGRRK DNRDDFRNKR +VH H
Sbjct: 197 LFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGELLERELRVHVKH 256
Query: 440 ARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVAN 499
A +RM KA+QRDL G+R + IEHYLDASIITNGL RAFSTGAW+HPYK++ER SGVVA
Sbjct: 257 AERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKMERISGVVAT 316
Query: 500 LGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVT 559
L RTNPLQT+A++R+TRQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNL++T
Sbjct: 317 LRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAIT 376
Query: 560 GLVSTNISESIFPQLLDCGMEELVDDTTTFLSKK 593
GLVSTNI E +LLD GME+LVDDT+T LS K
Sbjct: 377 GLVSTNIEEHFLDKLLDSGMEKLVDDTSTLLSGK 410
>M7Z8U6_TRIUA (tr|M7Z8U6) DNA-directed RNA polymerase D subunit 2a OS=Triticum
urartu GN=TRIUR3_32519 PE=4 SV=1
Length = 1225
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/550 (48%), Positives = 370/550 (67%), Gaps = 15/550 (2%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
S +A++ + + ++ FC +A+R FF E GLVSHQINSYN FI+ GLQ D+ G++
Sbjct: 75 SDPSAQVPIDFNIESLEKFCKEAARSFFTEKGLVSHQINSYNDFISHGLQELVDSLGEIT 134
Query: 98 VTPSYDPSKK-GDNEHFKYATVKFGKVTLDRPKFWGGAA--NAQEFKMLPRHARLQRMTY 154
V P YDPSK GD +++ATVKFG+V L++P FW + + Q+ ++ P HARLQ MTY
Sbjct: 135 VDPDYDPSKSVGD---WRHATVKFGRVELEKPTFWADNSELDEQKLRLKPVHARLQNMTY 191
Query: 155 AAKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXX-XXXGRLPVMVMSDLCWM 213
++KM V + VQV++ ++ SDK KTGK+ Y GRLPVMV S LCW+
Sbjct: 192 SSKMNVEMTVQVYSLNQ--SDKSKTGKDPYIQKKLILSPETKWVTIGRLPVMVKSSLCWL 249
Query: 214 KEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILK 273
E ++ +C FD+GGYFLIKG EKAF+A+E L ++WV+N+P W Y S +R ++ +K
Sbjct: 250 YELQETECQFDYGGYFLIKGTEKAFIAEEGRCLSRIWVTNSPSWDASYLSQIRREKIYVK 309
Query: 274 LVGNSKFEEINNG-EKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNI 332
LV + + N+G KV+++ FLG +P+WI+FF+LGVS+DKE D+ID + D + NI
Sbjct: 310 LVPSKE----NDGFHKVINLSFLGATMPIWIMFFALGVSTDKEAFDMIDIQDCDASLVNI 365
Query: 333 FFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKAR 392
+IR + E+C GFR G A Y++E+++ ++PP ES + + YLFP S KA
Sbjct: 366 LSATIRQSHEQCEGFRGGGRARQYVDEYIRKTKFPPEESFDGYVGRYLFPEVSDNRCKAL 425
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
FL YM+K LL+AY GRRKCDN+DDFRNKR H HA +RM K +Q+ L
Sbjct: 426 FLGYMIKCLLMAYCGRRKCDNKDDFRNKRLDLACQLLRRELWGHLRHAARRMVKVMQKHL 485
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
+GD D++ ++HY+DASIITNGL RAFSTG+W HPYK R SG+VA L RTNPLQ M+++
Sbjct: 486 SGDGDLQVLDHYVDASIITNGLNRAFSTGSWCHPYK-YGRCSGIVATLRRTNPLQMMSDM 544
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFP 572
R+TRQ Y G GDARYP+PS+WGK+CF+STPDGE CG VKNL+ + +VS+ + E +
Sbjct: 545 RKTRQLSAYWGSAGDARYPNPSYWGKLCFMSTPDGEKCGFVKNLAASAVVSSVMREPLID 604
Query: 573 QLLDCGMEEL 582
+ CGM++L
Sbjct: 605 LFVSCGMKKL 614
>M1D1M8_SOLTU (tr|M1D1M8) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400030880 PE=3 SV=1
Length = 1014
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/394 (64%), Positives = 297/394 (75%), Gaps = 1/394 (0%)
Query: 200 GRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAI 259
GR+PVMV S+LCWM A++ DCDFDHGGYF++KGAEK F+AQEQ+ LK+LWVSN W +
Sbjct: 10 GRIPVMVNSELCWMSGADRPDCDFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMV 69
Query: 260 GYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDL 319
Y+S KRNR+ LKL K E I K LSVYFL E+P+W+LFF+LGVSSD+EI+DL
Sbjct: 70 AYRSGEKRNRVYLKLTETLKHEHIKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDL 128
Query: 320 IDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY 379
ID +DT I NI SI DAD+ C FRKGK AL Y++ +K ++PP ES+EEC+ Y
Sbjct: 129 IDVDIKDTNIINILVASIHDADKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEY 188
Query: 380 LFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAH 439
LFP SGL +KARFL YMVK LLL+Y GRRK DNRDDFRNKR + H H
Sbjct: 189 LFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKH 248
Query: 440 ARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVAN 499
A +RM KALQRDL GDR V+P+EHYLDASIITNGL RAFSTG W HPYKR+ER SGVVA
Sbjct: 249 AERRMVKALQRDLCGDRQVQPLEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVAT 308
Query: 500 LGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVT 559
L RTNPLQ A+LR+TRQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL+
Sbjct: 309 LRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASM 368
Query: 560 GLVSTNISESIFPQLLDCGMEELVDDTTTFLSKK 593
GLVST + + + L CGM++LVDD+ T L K
Sbjct: 369 GLVSTTVLKPLLETLFRCGMQKLVDDSATSLHGK 402
>R7W6E3_AEGTA (tr|R7W6E3) DNA-directed RNA polymerase II subunit RPB2 OS=Aegilops
tauschii GN=F775_00990 PE=4 SV=1
Length = 1835
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/550 (48%), Positives = 368/550 (66%), Gaps = 15/550 (2%)
Query: 38 SSSNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLN 97
S +A++ + + ++ FC +A+R FF E GL+SHQINSYN FI+ GLQ D+ G++
Sbjct: 732 SDPSAQVPIDFNIESLEKFCKEAARSFFTEKGLISHQINSYNDFISHGLQELVDSLGEIT 791
Query: 98 VTPSYDPSKK-GDNEHFKYATVKFGKVTLDRPKFWGGAA--NAQEFKMLPRHARLQRMTY 154
V P YDPSK GD +++ATVKFG+V L++P FW + + Q+ ++ P HARLQ MTY
Sbjct: 792 VEPDYDPSKSVGD---WRHATVKFGRVELEKPTFWADNSELDEQKLRLKPVHARLQNMTY 848
Query: 155 AAKMKVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXX-XXXGRLPVMVMSDLCWM 213
++KM V + VQV++ ++ SDK KTGK+ Y GRLPVMV S LCW+
Sbjct: 849 SSKMNVEMTVQVYSLNQ--SDKSKTGKDPYIQKKLILSPETKWVTIGRLPVMVKSSLCWL 906
Query: 214 KEAEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILK 273
E ++ +C FD+GGYFLIKG EKAF+A+E L ++WV+N+P W Y S +R ++ +K
Sbjct: 907 YEHQETECQFDYGGYFLIKGTEKAFIAEEGRCLSRIWVTNSPSWDASYLSQIRREKIYVK 966
Query: 274 LVGNSKFEEINNG-EKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNI 332
LV + + N+G KV+S+ FLG +P+WI+FF+LGVSSDKE D+ID + D + NI
Sbjct: 967 LVPSKE----NDGFHKVISLSFLGATMPIWIMFFALGVSSDKEAFDMIDIQDCDASLVNI 1022
Query: 333 FFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKAR 392
+IR + E+C GFR G A Y++E+++ ++PP ES + + YLFP S KA
Sbjct: 1023 LSATIRQSHEQCEGFRGGGRARQYVDEYIRKTKFPPEESFDGYVGRYLFPEVSDNRCKAL 1082
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
FL YM+K LL+AY GRRKCDN+DDFRNKR H HA + M K +Q+ L
Sbjct: 1083 FLGYMMKCLLMAYCGRRKCDNKDDFRNKRLDLACQLLRRELWGHLRHAARHMVKVMQKHL 1142
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
+GD D++ ++ Y+DASIITNGL RAFSTG+W HPYK R SG+VA L RTNPLQ M+++
Sbjct: 1143 SGDGDLQVLDQYVDASIITNGLNRAFSTGSWCHPYK-YGRCSGIVATLRRTNPLQMMSDM 1201
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFP 572
R+TRQ Y G GDARYP+PS+WGK+CF+STPDGE CG VKNL+ + +VS+ + + +
Sbjct: 1202 RKTRQLSAYWGSAGDARYPNPSYWGKLCFMSTPDGEKCGFVKNLAASAVVSSVMRKPLID 1261
Query: 573 QLLDCGMEEL 582
+ CGM++L
Sbjct: 1262 LFVSCGMKKL 1271
>K3YFW0_SETIT (tr|K3YFW0) DNA-directed RNA polymerase OS=Setaria italica
GN=Si013128m.g PE=3 SV=1
Length = 1257
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/537 (47%), Positives = 356/537 (66%), Gaps = 12/537 (2%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +ASR FF E GLVSHQINSYN F++ GLQ D+FG++ V P YDPS K N+
Sbjct: 111 LEKFCNEASRSFFSETGLVSHQINSYNDFVSHGLQDLLDSFGEVTVEPDYDPSNKPSNKD 170
Query: 113 --FKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
+K+AT+KFGKV L+ P F Q+ K+ PRHA LQ+MTY+++M V + VQV+T
Sbjct: 171 GAWKHATIKFGKVKLEEPVFRVENSDLEVQDLKLKPRHALLQKMTYSSRMNVEITVQVYT 230
Query: 169 PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGY 228
K+ DK KTG + G LPVMV S+LCW+ + ++ +C FD GGY
Sbjct: 231 VDKI--DKAKTGNAMHVSRRDIMKETKQVSIGMLPVMVKSNLCWLHKLQESECQFDSGGY 288
Query: 229 FLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEK 288
FLIKG EK F+A+EQ L ++W+S+ P Y S+ KR ++ +KLV + + N K
Sbjct: 289 FLIKGTEKVFIAEEQRCLSRIWISDRPSLDASYLSVIKREKIHVKLVQSKR----NENRK 344
Query: 289 VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFR 348
V+++ FLG +P+W++FF+LGVSSDKE D+ID + D + NI +++++ ++C GFR
Sbjct: 345 VINISFLGAVMPIWVVFFALGVSSDKEAFDMIDIQDCDASLLNIISSTVKESHDECEGFR 404
Query: 349 KGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGR 408
A Y+++ ++ ++PP ES +E ++ Y+FP G KA FL YMVK LL+AY+G
Sbjct: 405 APGRARQYVDKLIRKTKFPPEESFDEYVSKYMFPDVKGTRSKAIFLGYMVKCLLMAYSGN 464
Query: 409 RKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDAS 468
RKCDN+DDFRNKR +H ++RM K +QRDL+ D +++ + Y+DAS
Sbjct: 465 RKCDNKDDFRNKRLDLACQLLRRELWLHINSIQRRMVKLMQRDLSSDGNLQDLRRYVDAS 524
Query: 469 IITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDA 528
I+TNGL RAFSTG+W HPYK ER SGVVA L R NPLQ M++LR+TRQ Y+G GDA
Sbjct: 525 IVTNGLNRAFSTGSWRHPYKS-ERCSGVVATLRRANPLQMMSDLRKTRQWFAYSGTTGDA 583
Query: 529 RYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESI-FPQLLDCGMEELVD 584
RYP+PS+WGK+CFLSTPDGE CG VKNL+VT +VS+ + + + + CGM++L D
Sbjct: 584 RYPNPSYWGKLCFLSTPDGEKCGFVKNLAVTAMVSSAVKKQVCIDTFVSCGMKKLDD 640
>C5YHJ3_SORBI (tr|C5YHJ3) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb07g004600 PE=3 SV=1
Length = 1251
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/543 (48%), Positives = 359/543 (66%), Gaps = 11/543 (2%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +ASR FF GLVSHQINSYNQF++ GLQ FD+ G++ V P YDPS K
Sbjct: 107 LEKFCREASRSFFSATGLVSHQINSYNQFVSHGLQDLFDSLGEITVEPDYDPSNKSGA-- 164
Query: 113 FKYATVKFGKVTLDRPKFWGGAAN--AQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+K+AT+KFG+V L P F + Q+ K PRHARLQRMTYA++M V + QV+
Sbjct: 165 WKHATIKFGRVELSEPVFMVDNLDLEQQDLKFKPRHARLQRMTYASRMNVEMTAQVYILD 224
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
K SDK KTGK+ + G LPVMV S+LCW+ + ++ DC FD GGYFL
Sbjct: 225 K--SDKAKTGKDTHVHRREIMTETKQVSMGLLPVMVKSNLCWLHKLQESDCQFDFGGYFL 282
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVL 290
IKG EK F+A+EQ FL ++W+++ P W Y S KR ++ +KLV + + N KV+
Sbjct: 283 IKGTEKVFIAEEQRFLSRIWITDYPSWDASYLSQIKREKINIKLVPSKR----NESCKVI 338
Query: 291 SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKG 350
++YF+G +P+W++FF+LGVSSDKE D+ID + D I NI +I+++ E+ GFR
Sbjct: 339 TIYFMGTIIPIWVVFFALGVSSDKEAFDMIDILDCDASIVNIISSTIKESHEEFEGFRAP 398
Query: 351 KNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRK 410
A Y+++ ++ ++PP ES +E + Y+FP +G+ KA FL YMVK LL+AY+G RK
Sbjct: 399 GRACQYVDKLIRKSKFPPKESFDEYVCRYMFPSVNGVRSKALFLGYMVKCLLMAYSGNRK 458
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
CDN+DDFRNKR H A RM K +QRDL+ D +++ + Y+DASII
Sbjct: 459 CDNKDDFRNKRLGLACQLLRRELWTHIKRAEWRMVKLMQRDLSNDGNLQDLRRYVDASII 518
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL RAFSTG+W HPY + R SGVVA L RTNPLQ M++LR+TRQ V Y+G VGDARY
Sbjct: 519 TNGLNRAFSTGSWRHPYLK-ARCSGVVATLRRTNPLQMMSDLRKTRQWVAYSGAVGDARY 577
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFL 590
P+PS WGK+CFLSTPDGE CG VKNL+VT +VS+ + + + + CGM++L D + +
Sbjct: 578 PNPSFWGKLCFLSTPDGEKCGFVKNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDI 637
Query: 591 SKK 593
S K
Sbjct: 638 SGK 640
>K7TLH8_MAIZE (tr|K7TLH8) DNA-directed RNA polymerase OS=Zea mays
GN=ZEAMMB73_942455 PE=3 SV=1
Length = 1259
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/543 (48%), Positives = 358/543 (65%), Gaps = 11/543 (2%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ FC +A+R FF E GLVSHQINSY+ F++ GLQ FD+ G++ V P YDPS K +
Sbjct: 112 LEKFCKEAARSFFSETGLVSHQINSYDHFVSHGLQELFDSLGEITVEPDYDPSNK--HGA 169
Query: 113 FKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+K+ATVKFG+V LD P F Q+ K PRHARLQ+MTYA++M V + VQV+
Sbjct: 170 WKHATVKFGRVKLDEPVFMLENSDLEEQDLKFKPRHARLQKMTYASRMNVEMTVQVYIFD 229
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
SDK KTGK+ + G LPVMV S+LCW+ +++KGDC FD GGYFL
Sbjct: 230 T--SDKAKTGKDTHVHKREIMTETKQINIGLLPVMVKSNLCWLHKSQKGDCPFDFGGYFL 287
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVL 290
IKG EK F+A+EQ FL ++WV++ P W Y S +R ++ +KLV + N KV+
Sbjct: 288 IKGTEKVFIAEEQRFLSRIWVTDHPSWDASYLSQIRREKINIKLVPSKS----NESCKVI 343
Query: 291 SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKG 350
++ F+G +P+W+ FF+LGVSSDKE D+ID + D I NI +I+++ E+ GFR
Sbjct: 344 NICFMGTIMPIWVAFFALGVSSDKEAFDMIDILDCDADIVNIISLTIKESHEEFEGFRTP 403
Query: 351 KNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRK 410
A Y++E ++ ++PP ES +E + Y+FPG +G KA FL YMVK LL+AY+G RK
Sbjct: 404 GRARQYVDELIRKSKFPPKESFDEYVCRYMFPGVNGFRSKALFLGYMVKCLLMAYSGNRK 463
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
CDN+DD RNKR H A +RM K +QRDL+ D +++ + Y+DASII
Sbjct: 464 CDNKDDLRNKRLDLSCQLLRRELWTHIKRAERRMVKLMQRDLSNDGNLQDLRRYVDASII 523
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL RAFSTG+W HPYK+ ER SGVVA L RTNPLQ M+++R+TRQ Y G GDARY
Sbjct: 524 TNGLNRAFSTGSWRHPYKK-ERCSGVVATLRRTNPLQMMSDVRKTRQWFAYAGTAGDARY 582
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFL 590
P+PS+WGK+CFLSTPD E CG VKNL+VT +VS+ + + + + CGM++L D + +
Sbjct: 583 PNPSYWGKLCFLSTPDAEKCGFVKNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDI 642
Query: 591 SKK 593
S K
Sbjct: 643 SGK 645
>A3BQ32_ORYSJ (tr|A3BQ32) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_26208 PE=2 SV=1
Length = 1257
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/534 (47%), Positives = 352/534 (65%), Gaps = 26/534 (4%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ C +ASR FF E LVSHQINSYN F++ GLQ FD+ ++ V P YDPSKK
Sbjct: 123 LEKLCKEASRSFFRETRLVSHQINSYNDFVSHGLQKMFDSLDEVTVEPDYDPSKKVGP-- 180
Query: 113 FKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+++AT+KFG+V L+ P FW + + K+ P+HARLQ+MTY++KMKV + VQV++ H
Sbjct: 181 WRHATIKFGRVELEEPVFWVDNCDLDVETLKLKPKHARLQKMTYSSKMKVEMTVQVYSLH 240
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
K SDK KTG++ Y G+LPVM + +C++D GGYFL
Sbjct: 241 K--SDKAKTGEDPYIQRKDIMKETKWVTIGKLPVM------------ESECEYDFGGYFL 286
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGY-KSLNKRNRLILKLVGNSKFEEINNG-EK 288
IKG EK FVA+EQ L ++W++++P W Y +S +R ++ +K V + N+G K
Sbjct: 287 IKGMEKVFVAEEQRCLSRIWINDSPTWEACYQRSQIRREKISIKPV------QSNDGFRK 340
Query: 289 VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFR 348
V+++YFLG +P+WI+FF+LGVSSDKE D+ID D + NI +I ++ E+C GF+
Sbjct: 341 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQCEGFQ 400
Query: 349 KGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGR 408
+ A Y+++ ++ ++PP S +E + ++FP SG KA FL YMV+ LLLA +G
Sbjct: 401 REGRASEYIDKLIRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGN 460
Query: 409 RKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDAS 468
RK DNRDDFRNKR VH HA+KRM K +QR L+GD D++P+E Y+ AS
Sbjct: 461 RKSDNRDDFRNKRLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHAS 520
Query: 469 IITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDA 528
I+TNGL RAFSTG+W HP+ + ER SG+VA L RTNPLQ M+++R+TRQ V Y GK GDA
Sbjct: 521 IVTNGLNRAFSTGSWCHPFNKRERCSGIVATLRRTNPLQMMSDMRKTRQWVAYAGKAGDA 580
Query: 529 RYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
RYP+PS+WGK+CFLSTPDGE CG VKNL++T +VS E L+ CGM++L
Sbjct: 581 RYPNPSYWGKLCFLSTPDGEKCGFVKNLAITAIVSCLAREPSVDALVSCGMKKL 634
>J3MQS1_ORYBR (tr|J3MQS1) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB08G14500 PE=3 SV=1
Length = 1069
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/543 (46%), Positives = 349/543 (64%), Gaps = 33/543 (6%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ C +ASR FF E LVSHQINSYN F++ GLQ F + ++ V P YDPSKK
Sbjct: 92 LEKLCKEASRSFFRETRLVSHQINSYNDFVSHGLQKMFVSLEEVTVDPDYDPSKKAGP-- 149
Query: 113 FKYATVKFGKVTLDRPKFWGGAAN--AQEFKMLPRHARLQRMTYAAKMKVTVEVQV--FT 168
+++AT+KFG+V L+ P FW + Q K+ P+HARLQ+MTY++KMKV + VQV T
Sbjct: 150 WRHATIKFGRVELEEPVFWSDNTDLDEQTLKLKPKHARLQKMTYSSKMKVEMTVQVAPLT 209
Query: 169 PHKV-------RSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDC 221
P + +SDK KTG + + GRLPVM + +C
Sbjct: 210 PLVLWSVYSLDKSDKAKTGDDPFIQRKDIMKETKWVTIGRLPVM------------ESEC 257
Query: 222 DFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGY-KSLNKRNRLILKLVGNSKF 280
++D GGYFLIKG EK F+A+EQ L ++W+++ P W Y +S +R ++ +KLV
Sbjct: 258 EYDFGGYFLIKGMEKVFIAEEQKVLSRIWINDRPIWEACYQRSQIQREKISVKLV----- 312
Query: 281 EEINNG-EKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
+ N+G KV+++YFL +P+WI+F +LG+SSDKE D+ID + NI +I +
Sbjct: 313 -QSNDGFRKVINLYFLSATIPIWIMFSALGISSDKEAFDIIDIPECYASVANIISSTITE 371
Query: 340 ADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVK 399
+ EKC GF G A Y+++ ++ ++PP S +E + Y+FP SG KA FL Y+V+
Sbjct: 372 SYEKCEGFHGGDRASQYIDKLIRNTKFPPKGSFDEYIGRYMFPDVSGNRSKALFLGYLVR 431
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LL+AY+G RKCDNRDDFRNKR H HA++RM K +QR LNG ++
Sbjct: 432 CLLMAYSGNRKCDNRDDFRNKRLDLPCELLQRELWGHVMHAKRRMVKVMQRHLNGGDALQ 491
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
P+E Y+DASI+TNGL RAFSTG+W HPY + ER SG+VA L RTNPLQ M++LR+TRQ V
Sbjct: 492 PLERYVDASIVTNGLNRAFSTGSWRHPYNKSERCSGIVATLRRTNPLQMMSDLRKTRQWV 551
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGM 579
Y GK GDARYP+PS+WGK+CFLSTPDGE CG VKNL+VT +VS ++ E + L+ CGM
Sbjct: 552 AYAGKAGDARYPNPSYWGKICFLSTPDGEKCGFVKNLAVTAIVSCSVREPLVDMLVSCGM 611
Query: 580 EEL 582
++L
Sbjct: 612 KKL 614
>Q6YYK5_ORYSJ (tr|Q6YYK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OJ1590_E05.24 PE=3 SV=1
Length = 1136
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/532 (45%), Positives = 333/532 (62%), Gaps = 52/532 (9%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ C +ASR FF E LVSHQINSYN F++ GLQ FD+ ++ V P YDPSKK
Sbjct: 32 LEKLCKEASRSFFRETRLVSHQINSYNDFVSHGLQKMFDSLDEVTVEPDYDPSKKVGP-- 89
Query: 113 FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKV 172
+++AT+KFG+V L V++ HK
Sbjct: 90 WRHATIKFGRVEL----------------------------------------VYSLHK- 108
Query: 173 RSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIK 232
SDK KTG++ Y G+LPVMV S+LCW+ + ++ +C++D GGYFLIK
Sbjct: 109 -SDKAKTGEDPYIQRKDIMKETKWVTIGKLPVMVKSNLCWLHKLQESECEYDFGGYFLIK 167
Query: 233 GAEKAFVAQEQLFLKKLWVSNTPDWAIGY-KSLNKRNRLILKLVGNSKFEEINNG-EKVL 290
G EK FVA+EQ L ++W++++P W Y +S +R ++ +K V + N+G KV+
Sbjct: 168 GMEKVFVAEEQRCLSRIWINDSPTWEACYQRSQIRREKISIKPV------QSNDGFRKVI 221
Query: 291 SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKG 350
++YFLG +P+WI+FF+LGVSSDKE D+ID D + NI +I ++ E+C GF++
Sbjct: 222 NLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQCEGFQRE 281
Query: 351 KNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRK 410
A Y+++ ++ ++PP S +E + ++FP SG KA FL YMV+ LLLA +G RK
Sbjct: 282 GRASEYIDKLIRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGNRK 341
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
DNRDDFRNKR VH HA+KRM K +QR L+GD D++P+E Y+ ASI+
Sbjct: 342 SDNRDDFRNKRLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHASIV 401
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL RAFSTG+W HP+ + ER SG+VA L RTNPLQ M+++R+TRQ V Y GK GDARY
Sbjct: 402 TNGLNRAFSTGSWCHPFNKRERCSGIVATLRRTNPLQMMSDMRKTRQWVAYAGKAGDARY 461
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
P+PS+WGK+CFLSTPDGE CG VKNL++T +VS E L+ CGM++L
Sbjct: 462 PNPSYWGKLCFLSTPDGEKCGFVKNLAITAIVSCLAREPSVDALVSCGMKKL 513
>A2YRP1_ORYSI (tr|A2YRP1) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_27986 PE=3 SV=1
Length = 1347
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/509 (44%), Positives = 321/509 (63%), Gaps = 37/509 (7%)
Query: 53 VKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH 112
++ C +ASR FF E LVSHQINSYN F++ GLQ FD+ ++ V P YDPSKK
Sbjct: 218 LEKLCKEASRSFFRETRLVSHQINSYNDFVSHGLQKMFDSLDEVTVEPDYDPSKKVGP-- 275
Query: 113 FKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+++AT+KFG+V L+ P FW + + K+ P+HARLQ+MTY++KMKV + VQV++ H
Sbjct: 276 WRHATIKFGRVELEEPVFWVDNCDLDVETLKLKPKHARLQKMTYSSKMKVEMTVQVYSLH 335
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFL 230
K SDK KTG++ Y G+LPVM + +C++D GGYFL
Sbjct: 336 K--SDKAKTGEDPYIQRKHIMKETKWVTIGKLPVM------------ESECEYDFGGYFL 381
Query: 231 IKGAEKAFVAQEQLFLKKLWVSNTPDWAIGY-KSLNKRNRLILKLVGNSKFEEINNG-EK 288
IKG EK FVA+EQ L ++W++++P W Y +S +R + +K V + N+G K
Sbjct: 382 IKGMEKVFVAEEQRCLSRIWINDSPTWEACYQRSQIRRENISIKPV------QSNDGFRK 435
Query: 289 VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFR 348
V+++YFLG +P+WI+FF+LGVSSDKE D+ID D + NI +I ++ E+C GF+
Sbjct: 436 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQCEGFQ 495
Query: 349 KGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGR 408
+ A Y+++ ++ ++PP S +E + ++FP SG KA FL YMV+ LLLA +G
Sbjct: 496 REGRASEYIDKLIRNTKFPPKGSFDEYIGRHMFPDVSGNRSKALFLGYMVRCLLLASSGN 555
Query: 409 RKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDAS 468
RK DNRDDFRNKR VH HA+KRM K +QR L+GD D++P+E Y+ AS
Sbjct: 556 RKSDNRDDFRNKRLDLACELLQRELWVHIMHAQKRMVKVMQRHLSGDGDLQPLECYVHAS 615
Query: 469 IITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDA 528
I+TNGL RAFSTG+W HP+ + ER SG++A L RTNPLQ M+++R+TRQ V Y GK GDA
Sbjct: 616 IVTNGLNRAFSTGSWCHPFNKRERCSGIIATLRRTNPLQMMSDMRKTRQWVAYAGKAGDA 675
Query: 529 RYPHPSHWGKVCFLSTPDGE---NCGLVK 554
RYP C P + +CG+ K
Sbjct: 676 RYP--------CLAREPSVDALVSCGMKK 696
>D7L3H4_ARALL (tr|D7L3H4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_898915 PE=3 SV=1
Length = 505
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 170/329 (51%), Positives = 227/329 (68%), Gaps = 11/329 (3%)
Query: 40 SNAEI-LKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV 98
+ AEI L ELGE ++ FC KA+ FFD++GL+SHQ+NSYN FI GLQ F++FGD+ V
Sbjct: 13 ATAEINLSELGESFLQSFCKKAATSFFDKYGLISHQLNSYNFFIQHGLQDVFESFGDMLV 72
Query: 99 TPSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM 158
PS+D KK DN+ ++YATVKFGKVT+++P F+ ++ +E + LP HARLQ MTY+A++
Sbjct: 73 EPSFDVIKKKDND-WRYATVKFGKVTVEKPTFF---SDDKELEFLPWHARLQNMTYSARI 128
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE--- 215
KV V+V+VF V+SDKFKTG+++Y G +PVMV S LC E
Sbjct: 129 KVNVQVEVFIKTVVKSDKFKTGQDEYVEKKILEVKKQDILIGSIPVMVKSVLCKTSEKGK 188
Query: 216 --AEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILK 273
KGDC FD GGYF+IKGAEK F+AQEQ+ K+LW+SN+P W + ++S NKRNR I++
Sbjct: 189 ENCRKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-WTVSFRSENKRNRFIVR 247
Query: 274 LVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIF 333
L N K E+ EKVL+VYFL E+PVW+LFF+LGVSSDKE ++LI + +D I N
Sbjct: 248 LSENEKSEDYKKREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMNLIAFDGDDASITNSL 307
Query: 334 FGSIRDADEKCSGFRKGKNALHYMEEHVK 362
SI +AD C FR G NAL Y+E+ +K
Sbjct: 308 IASIHEADAVCEAFRCGNNALSYVEQQIK 336
>M0VYL2_HORVD (tr|M0VYL2) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 901
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 151/289 (52%), Positives = 203/289 (70%), Gaps = 1/289 (0%)
Query: 294 FLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNA 353
FLG +P+WI+FF+LGVSSDKE D+ID + D + NI +IR +DE+C GFR G A
Sbjct: 3 FLGATMPIWIMFFALGVSSDKEAFDMIDIQDCDASLLNILSATIRQSDEQCEGFRGGGRA 62
Query: 354 LHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDN 413
Y++E+++ + PP ES + + YLFPG S KA FL YM+K LL+AY GRRKCDN
Sbjct: 63 RQYVDEYIRKTKLPPKESFDGYVGKYLFPGVSDNRCKALFLGYMMKCLLMAYCGRRKCDN 122
Query: 414 RDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNG 473
+DDFRNKR VH HA +RM+ +QR L+GD D++ ++HY+DAS+ITNG
Sbjct: 123 KDDFRNKRLDLACQLLRRELWVHLVHATRRMAMVMQRHLSGDGDLQVLDHYVDASVITNG 182
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L RAFSTG+W HP+K R SG+VA L RTNPLQ M+++R+TRQ Y G GDARYP+P
Sbjct: 183 LNRAFSTGSWCHPHK-YGRCSGIVATLRRTNPLQMMSDMRKTRQLSAYWGSAGDARYPNP 241
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEEL 582
S+WGK+CF+STPDGE CG VKNL+ + +VS+ + + + + CGM++L
Sbjct: 242 SYWGKLCFMSTPDGEKCGFVKNLAASAVVSSVMRKPLIDLFVSCGMKKL 290
>Q1L6W3_ANTMA (tr|Q1L6W3) DNA-directed RNA polymerase (Fragment) OS=Antirrhinum
majus GN=RPD2 PE=2 SV=1
Length = 821
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 164/207 (79%), Gaps = 2/207 (0%)
Query: 389 RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKAL 448
+KAR L YMVK LL AY GRRK DNRDDFRNKR +VH HA +RM+KA+
Sbjct: 7 QKARLLGYMVKCLLEAYRGRRKVDNRDDFRNKRLELAGELLERELRVHIKHAERRMTKAM 66
Query: 449 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 508
QRDL DR+++ I+ YLDASIITNGL RAFSTGAW+HPYKR+ER SGVVA L RTNPLQT
Sbjct: 67 QRDLYRDREIQSIDSYLDASIITNGLSRAFSTGAWSHPYKRMERISGVVATLRRTNPLQT 126
Query: 509 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-- 566
MA++R+TRQQV YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNL+ GLVSTN+
Sbjct: 127 MADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTNVLE 186
Query: 567 SESIFPQLLDCGMEELVDDTTTFLSKK 593
ES+ Q CGME+LVDDT++ L K
Sbjct: 187 QESLLRQFHVCGMEKLVDDTSSVLEGK 213
>A9TK27_PHYPA (tr|A9TK27) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_146741 PE=3 SV=1
Length = 1238
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 272/571 (47%), Gaps = 54/571 (9%)
Query: 58 TKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYAT 117
+ +++ F LV H + S+N+F+ GL A F+ G + P + K+A
Sbjct: 77 SAVAKIIFKGRSLVEHHLRSFNEFMEYGLPAMFEEAGSFDCIPDHSVLVDSGIGVRKWAR 136
Query: 118 VKFGKVTLDRPKFWGGAANAQEF-KMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+ +G+V + +P +E +LP ARL+ ++Y+A + V + ++V + + +K
Sbjct: 137 IVYGEVAVGKPYTTFTREGVKEVVDLLPHEARLRNLSYSAHLYVNMTLEV----RSQGNK 192
Query: 177 FKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMK------EAEKGDCDFDHGGYFL 230
ED G++PVMV S C + KG C FD GG+F+
Sbjct: 193 KTQNPEDMIETKTDTICV-----GKVPVMVNSSFCHLHGLSEKDSVAKGHCSFDDGGFFI 247
Query: 231 IKGAEKAFVAQEQLFLKKLWVS---NTPDWAIGYKSL------NKRNR--LILKLVGNSK 279
IKG+EK +AQE+ + ++VS T W Y N+ NR +KL K
Sbjct: 248 IKGSEKVLIAQEEKAHQSIYVSYLKRTDTWIATYSPTWRGFNSNQMNRGKTFVKLRMRKK 307
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
E ++ V L VP+ ILF +LG SSDKE ++ I Y + D++ ++ SI D
Sbjct: 308 ------AELLVGVPGLTEPVPLVILFRALGTSSDKEFLESICYDSTDSRFHDLLLSSIWD 361
Query: 340 ADEKCSGFRK------GKNALHYMEEHVKGIQY-----------PPSESMEECLNLYLFP 382
AD F+ G +A+ + + + +++ P E+ + +
Sbjct: 362 ADLILEEFQSRISYPAGASAIKSVRDQILSVRFLGTKLRNSRHVPSVEAGKTIIGQLFVH 421
Query: 383 GSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARK 442
G RKA L YMV L + GRR D++D F+NKR + AH +
Sbjct: 422 TEGGYTRKAMLLGYMVNQLCSTFLGRRLEDDKDHFKNKRLDLTGQLLSHQFRKAMAHLER 481
Query: 443 RMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGR 502
+ + L L RD+ P++ Y+ +I+T +Q AF+ G W ++SGVVA L R
Sbjct: 482 DVKRRLHPYLVKGRDLAPLKTYVTEAIVTKQMQSAFTLGNWN--TNEGLKSSGVVAVLKR 539
Query: 503 TNPLQTMAELRRTRQQVQYTGKVGD-ARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
NP+ T++ LR+ R + K D AR+P+ S+WG++C T DG CGL+K+L++T +
Sbjct: 540 MNPMATLSHLRQFRLNLPPPMKPTDPARHPNYSYWGRICPTQTSDGAECGLIKSLALTCV 599
Query: 562 VSTNI-SESIFPQLLDCGMEELVDDTTTFLS 591
VS++ E + L DCGM L + T +S
Sbjct: 600 VSSDTPEEPVLHVLSDCGMHSLEEITPLTIS 630
>C8VK81_EMENI (tr|C8VK81) DNA-directed RNA polymerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=ANIA_09120 PE=3 SV=1
Length = 1252
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 266/579 (45%), Gaps = 44/579 (7%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ LQ + G + + +
Sbjct: 11 EYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTLQELVEEQGQVTLDQTI 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ + D + +KFG V L RP G A MLP ARL+ MTYA+ + +
Sbjct: 71 PPSEDEVDPVVVRRYELKFGTVMLSRPMAMEGDGAAT--IMLPHEARLRNMTYASPLYLG 128
Query: 162 VEVQVFTPHKVR---SDKFKTGKEDYXXXXX-----------XXXXXXXXXXGRLPVMVM 207
++ ++ + D G ED G++P+M+
Sbjct: 129 IKKKIMEGRERMVGDRDDDDMGNEDRKATGTYLQWEEMALPPDQAKEETVHIGKMPIMLK 188
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S C +++ + +C +D GGYF+I G+EK +AQE Q+F KK S T
Sbjct: 189 SKYCLLRDLGEQALYDWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPSPT 247
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLG 309
P A ++ K +RL+ LKL G + G + S ++ ++P+ I+F +LG
Sbjct: 248 PYVAEIRSAVEKGSRLLSQLSLKLFGKGDSAKGGFGPTIRSTLPYIKADIPIVIVFRALG 307
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGI 364
V SD++I++ I Y DT + + I + E F + + H + +
Sbjct: 308 VVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHERRV 367
Query: 365 QYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXX 424
+Y E M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDL 426
Query: 425 XXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWT 484
+V F + + + +QR + DR++ + L AS +T GL+ A +TG W
Sbjct: 427 AGPLLANLFRVLFTRVTRDLQRYVQRCVESDREIY-LNVGLKASTVTQGLRYALATGNWG 485
Query: 485 HPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLST 544
K +GV L R T++ LRRT + GK+ R H +HWG VC T
Sbjct: 486 EQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAET 545
Query: 545 PDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
P+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 PEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 584
>A9CSV4_ENTBH (tr|A9CSV4) DNA-directed RNA polymerase OS=Enterocytozoon bieneusi
(strain H348) GN=EBI_25876 PE=3 SV=1
Length = 1138
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 254/536 (47%), Gaps = 44/536 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FFD+ GLV Q++S+NQF+ +Q D N S N + + FG++
Sbjct: 28 FFDQKGLVRQQLDSFNQFVKIKMQEIIDE----NSIISVKSIPTAGNSIEREIKLYFGQI 83
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
++ P + K+LP ARL+ +TY M + V+ + + + + D KT +
Sbjct: 84 SILGPPI-NTEIDGTSSKILPNEARLRDLTYWVNMFIDVK-KAYYENGIEVDVSKTIRVP 141
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKA 237
+ G LPVMV S+LC +KE G+C +D GGYF+I G EK
Sbjct: 142 F---------------GSLPVMVKSELCALKELNDKDNIRLGECPYDQGGYFIITGGEKV 186
Query: 238 FVAQEQLF--LKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV-LSVYF 294
VAQE++ + ++ + P + + + KL + + N + S+
Sbjct: 187 IVAQERIATNMVHIFKKSQPAPYTYFAEIRSVAEIGSKLPSIFSLKVVKNLRVIRASINL 246
Query: 295 LGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNAL 354
+ ++PV I+F +LG +SDKEI+ I Y N D ++ S+ +A S + +AL
Sbjct: 247 VKQDIPVLIIFRALGFNSDKEILSYIQYDN-DKELNEYLLNSLEEA----SCIQDQLSAL 301
Query: 355 HYMEEHVKGIQYPPSESME---ECLNLYLFP--GSSGL--NRKARFLAYMVKSLLLAYTG 407
++ + I P S+ ++ + L P G +KA FL YM+ +LL TG
Sbjct: 302 DFIGKRSAPIGSPKSKRIDFAKQILIKEFLPHIGQQEFCETKKAYFLGYMINKILLVITG 361
Query: 408 RRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDA 467
+R D+RD + KR KV F +K LQ+ + +R+ + L +
Sbjct: 362 KRDVDDRDHYGKKRMDLSGPLLANLFKVLFKKLLTETTKYLQKCVENNREFN-LTIGLKS 420
Query: 468 SIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGD 527
SIIT G + A +TG W H K + +GV L R N L T++ LRR ++ GK+
Sbjct: 421 SIITQGFKYALATGNWGHQEKAMSTRAGVAQVLSRYNFLSTLSHLRRVNTPIEKEGKLAA 480
Query: 528 ARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGMEEL 582
R H +HWG +C + TP+G CGLVKNLS+ +S S + ++L + G+E L
Sbjct: 481 PRQLHNTHWGMICPIETPEGHACGLVKNLSLMAYISVGKSSNQIIEILEELGVERL 536
>R9PNZ8_9BASI (tr|R9PNZ8) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_007418 PE=4 SV=1
Length = 1241
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 271/574 (47%), Gaps = 58/574 (10%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E++ + C R FF+E GLV HQ++S+N+F++ +Q + L + S S
Sbjct: 47 EYSEEITQEDCWDVIRAFFEEKGLVRHQLDSFNEFMSNTIQELVEEVRSLTLEQSDQHSG 106
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
+++ +Y ++FG++ L++P ++ ++ P+ AR + +TY+A + V V +V
Sbjct: 107 HAEDKTRRYE-IEFGQIYLNKPTM--TESDGSSAQLFPQEARFRNLTYSASLFVDVTQKV 163
Query: 167 FTPHKVRSDKF-------KTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK- 218
+ D + GK D G++P+M+ SD CW+K +
Sbjct: 164 LVQSEDEVDLNGDPAWIPEYGKTDVEEQQIFI--------GKVPIMLKSDFCWLKGLDDE 215
Query: 219 -----GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKR 267
+C +D GGYF+I G+EK +AQE++ ++V S P + + ++ K
Sbjct: 216 MSYSLNECPYDAGGYFVINGSEKVLIAQERMAANHVYVFSKAPPAPVTFLAEIRSAVEKG 275
Query: 268 NRLI----LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYG 323
+ I +KL +K + NN + ++ ++ ++P+ I+F +LG+ D+E++ I Y
Sbjct: 276 GKTISTMQVKLFSRNKEKTANNTIRA-TLPYIRNDIPIVIVFRALGIVPDREVLQHICYD 334
Query: 324 NEDTQ--------IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEEC 375
DT I+ F RD G R L + V +E
Sbjct: 335 FNDTPMLEMLKPCIEEAFVIQDRDVALDFIGRRGTTTGLSRAKRTVYA---------QEI 385
Query: 376 LNLYLFP---GSSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
L + P S G N +KA F YM+ LLLA RR+ D+RD F KR
Sbjct: 386 LQKEMLPHISTSEGSNTKKAYFFGYMIHRLLLAALDRREIDDRDHFGKKRIDLGGPLMAN 445
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
++ F + + + LQ+ + R+ I+ + +S ITNGL+ + +TG W K ++
Sbjct: 446 LFRMLFRKVTRDVYRHLQKCVEEHREFH-IQAAVKSSTITNGLRYSLATGNWGDQKKAMQ 504
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CG
Sbjct: 505 AKAGVSQVLNRFGFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACG 564
Query: 552 LVKNLSVTGLVSTNI-SESIFPQLLDCGMEELVD 584
LVKNLS+ V+ S I L + G++ LVD
Sbjct: 565 LVKNLSLMATVTVGTPSAPIVEFLEEFGLDSLVD 598
>I2FV89_USTH4 (tr|I2FV89) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_06419 PE=3 SV=1
Length = 1241
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 271/574 (47%), Gaps = 58/574 (10%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E++ + C R FF+E GLV HQ++S+N+F++ +Q + L + S S
Sbjct: 47 EYSEEITQEDCWDVIRAFFEEKGLVRHQLDSFNEFMSNTIQELVEEVRSLTLEQSDQHSG 106
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
+++ +Y ++FG++ L++P ++ ++ P+ AR + +TY+A + V V +V
Sbjct: 107 HAEDKTRRYE-IEFGQIYLNKPTMT--ESDGSSAQLFPQEARFRNLTYSASLFVDVTQKV 163
Query: 167 FTPHKVRSDKF-------KTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK- 218
+ D + GK D G++P+M+ SD CW+K +
Sbjct: 164 LVQSEDEVDLNGDPAWIPEYGKTDVEEEQIFI--------GKVPIMLKSDFCWLKGLDDE 215
Query: 219 -----GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKR 267
+C +D GGYF+I G+EK +AQE++ ++V S P + + ++ K
Sbjct: 216 MSYSLNECPYDAGGYFVINGSEKVLIAQERMAANHVYVFSKAPPAPVTFLAEIRSAVEKG 275
Query: 268 NRLI----LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYG 323
+ I +KL +K + NN + ++ ++ ++P+ I+F +LG+ D+E++ I Y
Sbjct: 276 GKTISTMQVKLFSRNKEKTANNTIRA-TLPYIRNDIPIVIVFRALGIVPDREVLQHICYD 334
Query: 324 NEDTQ--------IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEEC 375
DT I+ F RD G R L + V +E
Sbjct: 335 FNDTPMLEMLKPCIEEAFVIQDRDVALDFIGRRGTTTGLSRAKRTVYA---------QEI 385
Query: 376 LNLYLFP---GSSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
L + P S G N +KA F YM+ LLLA RR+ D+RD F KR
Sbjct: 386 LQKEMLPHISTSEGSNTKKAYFFGYMIHRLLLAALDRREIDDRDHFGKKRIDLGGPLMAN 445
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
++ F + + + LQ+ + R+ I+ + +S ITNGL+ + +TG W K ++
Sbjct: 446 LFRMLFRKVTRDVYRHLQKCVEEHREFH-IQAAVKSSTITNGLRYSLATGNWGDQKKAMQ 504
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CG
Sbjct: 505 AKAGVSQVLNRFAFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACG 564
Query: 552 LVKNLSVTGLVSTNI-SESIFPQLLDCGMEELVD 584
LVKNLS+ V+ S I L + G++ LVD
Sbjct: 565 LVKNLSLMATVTVGTPSAPIVEFLEEFGLDSLVD 598
>M9MEX9_9BASI (tr|M9MEX9) RNA polymerase II, second largest subunit OS=Pseudozyma
antarctica T-34 GN=PANT_18d00013 PE=4 SV=1
Length = 1240
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 270/571 (47%), Gaps = 58/571 (10%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E++ + C R FF+E GLV HQ++S+N+F++ +Q + L + S S +
Sbjct: 49 EEITQEDCWDVIRAFFEEKGLVRHQLDSFNEFMSNTIQELVEEVRSLTLEQSDQHSGHAE 108
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
++ +Y ++FG++ L++P ++ ++ P+ AR + +TY+A + V V +V
Sbjct: 109 DKTRRYE-IEFGQIYLNKPTMT--ESDGSSAQLFPQEARYRNLTYSASLFVDVTQKVLVQ 165
Query: 170 HKVRSD-------KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK---- 218
+ D + GK D G++P+M+ SD CW+K +
Sbjct: 166 SEDELDLNGDAAWVPEHGKTDVDEQQIFI--------GKVPIMLKSDFCWLKGLDDEMSY 217
Query: 219 --GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRL 270
+C +D GGYF+I G+EK +AQE++ ++V S P + + ++ K +
Sbjct: 218 SLNECPYDAGGYFVINGSEKVLIAQERMAANHVYVFSKAPPAPVTFLAEIRSAVEKGGKT 277
Query: 271 I----LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNED 326
I +KL +K + NN + ++ ++ ++P+ I+F +LG+ D+E++ I Y D
Sbjct: 278 ISTMQVKLFSRNKEKTANNTIRA-TLPYIRNDIPIVIVFRALGIVPDREVLQHICYDFND 336
Query: 327 TQ--------IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNL 378
T I+ F RD G R L + V +E L
Sbjct: 337 TPMLEMLKPCIEEAFVIQDRDVALDFIGRRGTTTGLSRAKRTVYA---------QEILQK 387
Query: 379 YLFP---GSSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXK 434
+ P S G N +KA F YM+ LLLA RR+ D+RD F KR +
Sbjct: 388 EMLPHVSTSEGSNTKKAYFFGYMIHRLLLAALDRREIDDRDHFGKKRIDLGGPLMANLFR 447
Query: 435 VHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTS 494
+ F + + + LQ+ + R+ I+ + +S ITNGL+ + +TG W K ++ +
Sbjct: 448 MLFRKVTRDVYRHLQKCVEEHREFH-IQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKA 506
Query: 495 GVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK 554
GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVK
Sbjct: 507 GVSQVLNRFAFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVK 566
Query: 555 NLSVTGLVSTNI-SESIFPQLLDCGMEELVD 584
NLS+ V+ S I L + G++ LVD
Sbjct: 567 NLSLMATVTVGTPSAPIVEFLEEFGLDSLVD 597
>B3L0J5_PLAKH (tr|B3L0J5) DNA-directed RNA polymerase OS=Plasmodium knowlesi
(strain H) GN=PKH_040430 PE=3 SV=1
Length = 1371
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 254/557 (45%), Gaps = 44/557 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF HGLV+ QI SYN FI +Q D L + P +GD + +KFG++
Sbjct: 84 FFGSHGLVNQQIESYNDFIEYRMQEIIDEHPALEIRPQAQYRSEGDEQKNVMYALKFGQL 143
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+LDRP + N + P+ ARL+ +TY++ + + +E + + + K
Sbjct: 144 SLDRPFY--DERNLTNKNLWPQEARLRNLTYSSAIYIDIEQSTYVVDESSGSQILKDKFI 201
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
Y GR+P+M+ S CW K A+ G+C FD GGYF++ G EK
Sbjct: 202 YERINL----------GRIPLMLKSMFCWTKGLPESEIADMGECAFDQGGYFIVNGGEKV 251
Query: 238 FVAQEQLFLKKLWV--SNTPD---WAIGYKSLNKRNR------LILKLVGNSKFEEI-NN 285
VAQE++ ++V P W +S +R++ + +K S+ +
Sbjct: 252 LVAQERMAHNFIYVFKKKQPSKFGWVAEIRSQMERSQATSAFSVKMKTKTGSRGSSVRTG 311
Query: 286 GEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCS 345
G+ V ++ ++ E+ V ILF +LG +SD++I+ I Y D + N ++R+ E+C
Sbjct: 312 GQLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDFNDKMMIN----TLRETLEECI 367
Query: 346 GFRKGKNALHYM--------EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+ L ++ K I Y +E L ++ G ++K+ F+ YM
Sbjct: 368 DYPTQDICLDFIGKRGPTVGASREKRILYAKELLRKEVLP-HMGTGPGVESKKSYFIGYM 426
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
+ LLLA GR K D+RD F KR +F K + + LQR ++ ++
Sbjct: 427 INRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFSTYFRKMAKDVKRVLQRQIDNNKP 486
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
S IT G+Q +TG W +GV L R ++ LRR
Sbjct: 487 FDVAGAVRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSSCLSHLRRLNT 546
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-ESIFPQLLD 576
+ GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S +IF LL+
Sbjct: 547 PLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTSTNNIFEFLLE 606
Query: 577 CGMEELVDDTTTFLSKK 593
G+E L + + +K
Sbjct: 607 WGLESLDEVPPQLMKEK 623
>E6ZNL3_SPORE (tr|E6ZNL3) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr15171 PE=3 SV=1
Length = 1242
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 265/564 (46%), Gaps = 58/564 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C R FF+E GLV HQ++S+N+F++ +Q + L + S S +++ +Y
Sbjct: 58 CWDVIRAFFEEKGLVRHQLDSFNEFMSNTIQELVEEVRSLTLEQSDQHSGHAEDKTRRYE 117
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSD- 175
++FG++ L++P ++ ++ P+ AR + +TY+A + V V +V D
Sbjct: 118 -IEFGQIYLNKPTMT--ESDGSSAQLFPQEARFRNLTYSASLFVDVTQKVLVQSHDEVDL 174
Query: 176 ------KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDCDF 223
+ GK D G++P+M+ SD CW+K + +C +
Sbjct: 175 NGDPAWVPEHGKTDVEEQQIFI--------GKVPIMLKSDFCWLKGLDDEMSYSLNECPY 226
Query: 224 DHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI----LK 273
D GGYF+I G+EK +AQE++ ++V S P + + ++ K + I +K
Sbjct: 227 DAGGYFVINGSEKVLIAQERMAANHVYVFSKAPPAPVTFLAEIRSAVEKGGKTISTMQVK 286
Query: 274 LVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQ----- 328
L +K + NN + ++ ++ ++P+ I+F +LG+ D+E++ I Y DT
Sbjct: 287 LFSRNKEKTANNTIRA-TLPYIRNDIPIVIVFRALGIVPDREVLQHICYDFNDTPMLEML 345
Query: 329 ---IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFP--- 382
I+ F RD G R L + V +E L + P
Sbjct: 346 KPCIEEAFVIQDRDVALDFIGRRGTTTGLSRAKRTVYA---------QEILQKEMLPHIS 396
Query: 383 GSSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHAR 441
S G N +KA F YM+ LLLA RR+ D+RD F KR ++ F
Sbjct: 397 TSEGSNTKKAYFFGYMIHRLLLAALDRREIDDRDHFGKKRIDLGGPLMANLFRMLFRKVT 456
Query: 442 KRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 501
+ + + LQ+ + R+ I+ + +S ITNGL+ + +TG W K ++ +GV L
Sbjct: 457 RDVYRHLQKCVEEHREFH-IQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLN 515
Query: 502 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 516 RFAFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAT 575
Query: 562 VSTNI-SESIFPQLLDCGMEELVD 584
V+ S I L + G++ LVD
Sbjct: 576 VTVGTPSAPIVEFLEEFGLDSLVD 599
>Q0CWW4_ASPTN (tr|Q0CWW4) DNA-directed RNA polymerase OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=ATEG_01820 PE=3 SV=1
Length = 1256
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 268/585 (45%), Gaps = 54/585 (9%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E E+ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDEMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
P++ + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPNEDEVDPIVLRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 V----------------EVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVM 205
+ E ++ P + R + + + G++P+M
Sbjct: 129 ITKRIMEGRERLVADRNEEEMGEPVEDRKSQGTYLQWEQKELPPDQAKEETVFIGKMPIM 188
Query: 206 VMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVS 252
+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 189 LKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPS 247
Query: 253 NTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFS 307
TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F +
Sbjct: 248 PTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFRA 307
Query: 308 LGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVK 362
LGV SD++I++ I Y DT + + I + E F + + H +
Sbjct: 308 LGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHER 367
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++Y E M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRL 426
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAF 478
+V F + + + +QR + +R++ YL+ AS +T GL+ A
Sbjct: 427 DLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREI-----YLNIGIKASTLTGGLKYAL 481
Query: 479 STGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGK 538
+TG W K +GV L R T++ LRRT + GK+ R H +HWG
Sbjct: 482 ATGNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL 541
Query: 539 VCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 542 VCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 586
>H0EN05_GLAL7 (tr|H0EN05) DNA-directed RNA polymerase OS=Glarea lozoyensis
(strain ATCC 74030 / MF5533) GN=M7I_4004 PE=3 SV=1
Length = 1263
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 267/579 (46%), Gaps = 64/579 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F++ +Q + L + + PS + +
Sbjct: 25 CWAVISSFFESKGLVSQQLDSFDEFVSTTMQELVEENSQLTLDQNNPPSSDDNPIALRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAA----KMKVTVEVQVFTPHKV 172
+KFG V L RP G + MLP+ ARL+ +TY++ +M V V V P +
Sbjct: 85 EIKFGTVLLSRPAMTEG--DGTTAVMLPQEARLRNLTYSSPLYLEMTKKVSVAVERPVSL 142
Query: 173 ------------RSDKFKT--------GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCW 212
R+ +F T ++ G+LP+M+ S C
Sbjct: 143 NEMDEEQLAEHHRTGEFPTRLLWEDEDSGQEITAAGDKQDKIDRVYIGKLPIMLKSKYCI 202
Query: 213 MKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAI 259
+K+ ++ +C +D GGYF+I G+EK +AQE Q+F KK S TP A
Sbjct: 203 LKDLDEDELYGWNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKPLPSPTPYIAE 261
Query: 260 GYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDK 314
+L K +RLI +KL + G+ + S ++ ++P+ ++F +LGV SD+
Sbjct: 262 IRSALEKGSRLISSMTIKLFAKGDGQRGGFGQTIKSTLPYVKSDIPIAVVFRALGVVSDE 321
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEE--HVKGI 364
+I++ I Y DTQ+ + I +A D + + G R N L + H + I
Sbjct: 322 DILNHICYDRSDTQMLEMLKPCIEEAFVIQDREVALDFIGKRGNSNTLTRDKRVRHARDI 381
Query: 365 QYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXX 424
M++ L ++ RKA FL YMV +L GRR+CD+RD F KR
Sbjct: 382 -------MQKELLPHISQKEGSETRKAFFLGYMVHKMLQCALGRRECDDRDHFGKKRLDL 434
Query: 425 XXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWT 484
+ F + K LQR + +R+ + + ++ +TNGL+ + +TG W
Sbjct: 435 AGPLLAKLFRNLFKRLTGDVYKYLQRCVENNREFN-LTLGVKSTTLTNGLKYSLATGNWG 493
Query: 485 HPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLST 544
K + T+GV L R T++ LRRT + GK+ R H +HWG VC T
Sbjct: 494 DQKKAAQSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAET 553
Query: 545 PDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
P+G+ CGLVKNL++ V+ S+ I ++ ME L
Sbjct: 554 PEGQACGLVKNLALMCYVTVGTPSDPIIEFMIQRNMEVL 592
>Q4WAN4_ASPFU (tr|Q4WAN4) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_7G01920 PE=3 SV=1
Length = 1255
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 266/585 (45%), Gaps = 53/585 (9%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E E+ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSKKGDNEH-FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ D+ + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPSEDEDDPVVLRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVF--------------------TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGR 201
+ ++ K R + +++ G+
Sbjct: 129 ITKRIMEGRERLIADRDEDDAAPDADEDRKARGTYLQWEQKELPPDQAKEETVFI---GK 185
Query: 202 LPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKK 248
+P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 MPIMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KK 244
Query: 249 LWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWI 303
S TP A ++ K +RL+ LKL + G + S ++ ++P+ +
Sbjct: 245 APPSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVV 304
Query: 304 LFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYME 358
+F +LGV SD++I++ I Y DT + + I + E F + +
Sbjct: 305 VFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSM 364
Query: 359 EHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFR 418
H + ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 365 NHERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFG 423
Query: 419 NKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAF 478
KR +V F + + + +QR + +R++ + + AS +T GL+ A
Sbjct: 424 KKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYAL 482
Query: 479 STGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGK 538
+TG W K +GV L R T++ LRRT + GK+ R H +HWG
Sbjct: 483 ATGNWGEQKKAASSKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL 542
Query: 539 VCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 543 VCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 587
>B0YC08_ASPFC (tr|B0YC08) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_088490
PE=3 SV=1
Length = 1255
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 266/585 (45%), Gaps = 53/585 (9%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E E+ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSKKGDNEH-FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ D+ + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPSEDEDDPVVLRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVF--------------------TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGR 201
+ ++ K R + +++ G+
Sbjct: 129 ITKRIMEGRERLIADRDEDDAAPDADEDRKARGTYLQWEQKELPPDQAKEETVFI---GK 185
Query: 202 LPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKK 248
+P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 MPIMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KK 244
Query: 249 LWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWI 303
S TP A ++ K +RL+ LKL + G + S ++ ++P+ +
Sbjct: 245 APPSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVV 304
Query: 304 LFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYME 358
+F +LGV SD++I++ I Y DT + + I + E F + +
Sbjct: 305 VFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSM 364
Query: 359 EHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFR 418
H + ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 365 NHERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFG 423
Query: 419 NKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAF 478
KR +V F + + + +QR + +R++ + + AS +T GL+ A
Sbjct: 424 KKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYAL 482
Query: 479 STGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGK 538
+TG W K +GV L R T++ LRRT + GK+ R H +HWG
Sbjct: 483 ATGNWGEQKKAASSKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL 542
Query: 539 VCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 543 VCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 587
>A5KBW7_PLAVS (tr|A5KBW7) DNA-directed RNA polymerase OS=Plasmodium vivax (strain
Salvador I) GN=PVX_002755 PE=3 SV=1
Length = 1339
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 256/560 (45%), Gaps = 48/560 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYD-PSKKGDNEHFKYATVKFGK 122
FF HGLV+ QI SYN FI +Q D + + P S + DN++ YA +KFG+
Sbjct: 43 FFGSHGLVNQQIESYNDFIEYRMQEIIDEHPQIEIRPQPQYRSDRDDNKNVMYA-LKFGQ 101
Query: 123 VTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKE 182
++LDRP + N + P+ ARL+ +TY++ + + +E + + S + + KE
Sbjct: 102 LSLDRPFY--DERNLTNKNLWPQEARLRNLTYSSAIYIDIEQSTYVVDE--STRSQILKE 157
Query: 183 DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEK 236
+ GR+P+M+ S CW K A+ G+C FD GGYF++ G EK
Sbjct: 158 KFIYERINL--------GRIPLMLKSMFCWTKGLPESEIADMGECAFDQGGYFIVNGGEK 209
Query: 237 AFVAQEQLFLKKLWV--SNTPD---WAIGYKSLNKRNRLILKLVGNSKFEE--------- 282
VAQE++ ++V P W +S +R++ K +
Sbjct: 210 VLVAQERMAHNFIYVFKKKQPSKFGWVAEIRSQMERSQATSAFSVKMKTKTGSRGSGGSA 269
Query: 283 INNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADE 342
G+ V ++ ++ E+ V ILF +LG +SD++I+ I Y D + N ++R+ E
Sbjct: 270 RTGGQLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDFNDKMMIN----TLRETLE 325
Query: 343 KCSGFRK--------GKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFL 394
+C + GK K I Y +E L ++ G ++K+ F+
Sbjct: 326 ECIDYPTQDICLDFIGKRGPTVGASREKRILYAKELLRKEVLP-HMGTGPGVESKKSYFI 384
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YM+ LLLA GR K D+RD F KR +F K + + LQR ++
Sbjct: 385 GYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFSTYFRKMAKDVKRVLQRQIDN 444
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
++ S IT G+Q +TG W +GV L R ++ LRR
Sbjct: 445 NKPFDVAGAVRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSSCLSHLRR 504
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-ESIFPQ 573
+ GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S +IF
Sbjct: 505 LNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTSTNNIFEF 564
Query: 574 LLDCGMEELVDDTTTFLSKK 593
LL+ G+E L + + +K
Sbjct: 565 LLEWGLESLDEVPPQLMKEK 584
>A1D971_NEOFI (tr|A1D971) DNA-directed RNA polymerase OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=NFIA_114650 PE=3 SV=1
Length = 1255
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 258/568 (45%), Gaps = 47/568 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH-FKY 115
C FFD GLVS Q++S+++FI++ +Q + G + + + PS D+ +
Sbjct: 25 CWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTLPPSDDEDDPVVLRR 84
Query: 116 ATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV------FTP 169
+KFG V L RP G + MLP+ ARL+ +TYA+ + + + ++
Sbjct: 85 YELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLGITKRIMEGRERLIA 142
Query: 170 HKVRSDKFKTGKEDYXXX-----------XXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
+ D ED G++P+M+ S C +K+ +
Sbjct: 143 DRDEDDVAPDADEDRKARGTYLQWEQKELPADQAKEETVFIGKMPIMLKSKYCILKDLSE 202
Query: 219 ------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLN 265
+C +D GGYF+I G+EK +AQE Q+F KK S TP A ++
Sbjct: 203 QALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPSPTPYVAEIRSAVE 261
Query: 266 KRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIIDLI 320
K +RL+ LKL + G + S ++ ++P+ ++F +LGV SD++I++ I
Sbjct: 262 KGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFRALGVVSDEDILNHI 321
Query: 321 DYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEEC 375
Y DT + + I + E F + + H + ++Y E M++
Sbjct: 322 CYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHERRVRYA-REIMQKE 380
Query: 376 LNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKV 435
L ++ RKA FL YMV LL GRR D+RD F KR +V
Sbjct: 381 LLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLANLFRV 440
Query: 436 HFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSG 495
F + + + +QR + +R++ + + AS +T GL+ A +TG W K +G
Sbjct: 441 LFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGNWGEQKKAASSKAG 499
Query: 496 VVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKN 555
V L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKN
Sbjct: 500 VSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKN 559
Query: 556 LSVTGLVSTNI-SESIFPQLLDCGMEEL 582
L++ ++ SE I ++ ME L
Sbjct: 560 LALMCYITVGTPSEPIIDFMIQRNMEVL 587
>G3XUX0_ASPNA (tr|G3XUX0) DNA-directed RNA polymerase OS=Aspergillus niger
(strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 /
NCTC 3858a / NRRL 328 / USDA 3528.7) GN=ASPNIDRAFT_54460
PE=3 SV=1
Length = 1256
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 263/581 (45%), Gaps = 46/581 (7%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPSEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVFTPHKV-----RSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVM 205
V ++ + D ED G++P+M
Sbjct: 129 VTKKIMEGRERLVADRDDDDMAESTEDKKAHGTYLQWEQKELPADQAKEETVFIGKMPIM 188
Query: 206 VMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVS 252
+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 189 LKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPS 247
Query: 253 NTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFS 307
TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F +
Sbjct: 248 PTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFRA 307
Query: 308 LGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVK 362
LGV SD++I++ I Y DT + + I + E F + + H +
Sbjct: 308 LGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHER 367
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++Y E M++ ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RVRYA-REIMQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRL 426
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+V F + + + +QR + +R++ + + AS +T GL+ A +TG
Sbjct: 427 DLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGN 485
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 WGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 545
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 ETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 586
>A2QYC2_ASPNC (tr|A2QYC2) DNA-directed RNA polymerase OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=An12g00720 PE=3 SV=1
Length = 1256
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 263/581 (45%), Gaps = 46/581 (7%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPSEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVFTPHKV-----RSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVM 205
V ++ + D ED G++P+M
Sbjct: 129 VTKKIMEGRERLVADRDDDDMAESTEDKKAHGTYLQWEQKELPADQAKEETVFIGKMPIM 188
Query: 206 VMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVS 252
+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 189 LKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPS 247
Query: 253 NTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFS 307
TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F +
Sbjct: 248 PTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFRA 307
Query: 308 LGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVK 362
LGV SD++I++ I Y DT + + I + E F + + H +
Sbjct: 308 LGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHER 367
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++Y E M++ ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RVRYA-REIMQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRL 426
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+V F + + + +QR + +R++ + + AS +T GL+ A +TG
Sbjct: 427 DLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGN 485
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 WGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 545
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 ETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 586
>A7E6G0_SCLS1 (tr|A7E6G0) DNA-directed RNA polymerase OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_00885 PE=3
SV=1
Length = 1267
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 262/569 (46%), Gaps = 47/569 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD GLVS QI+S+++F+ +Q + L + + PS + +
Sbjct: 25 CWTVISSFFDAKGLVSQQIDSFDEFVQTTMQELVEENSQLTLDQNNPPSSNDNPIALRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRS 174
+KFG + L RP G + Q MLP+ ARL+ +TY++ + ++T QV V
Sbjct: 85 EIKFGTIMLSRPAMTEGDGSTQ--VMLPQEARLRNLTYSSPLYIEMTKSTQVAVERPVPL 142
Query: 175 DKFKTGKE---------------DYXXX----XXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
++ +E +Y G+LP+M+ S+ C++K
Sbjct: 143 NELDDEQEADLANGGEHPTRLVWEYEDGDPDGAKGGPAPERVYVGKLPMMLKSEYCFLKN 202
Query: 216 AEKGD------CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTP-DWAIGY-----KS 263
++ D C +D GGYF+I G+EK +AQE+ + V P + A+ Y +
Sbjct: 203 CDEDDLYGWNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPANQAVSYLAEIRSA 262
Query: 264 LNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIID 318
L K +RLI +KL G+ V S ++ ++P+ I+F +LGV SD++I++
Sbjct: 263 LEKGSRLISSLQIKLYDKGDSGRGGFGKTVKSTLPYIKQDIPIAIVFRALGVVSDEDILN 322
Query: 319 LIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEE 374
I Y DTQ+ + I +A D + + GK K I+Y + M++
Sbjct: 323 HICYDRNDTQMLEMLKPCIEEAFVIQDREVALDFIGKRGNGTSLTRDKRIKYA-RDIMQK 381
Query: 375 CLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXK 434
L ++ RKA FL YMV LL GRR+ D+RD F KR +
Sbjct: 382 ELLPHISQKEGSETRKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFR 441
Query: 435 VHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTS 494
F + + LQR + +R+ + + ++ ITNGL+ + +TG W K T+
Sbjct: 442 NLFRRLTTDVYRYLQRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTA 500
Query: 495 GVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK 554
GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVK
Sbjct: 501 GVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVK 560
Query: 555 NLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
NL++ V+ S+ I ++ ME L
Sbjct: 561 NLALMCYVTVGTPSDPIVEFMIQRNMEVL 589
>G7XW42_ASPKW (tr|G7XW42) DNA-directed RNA polymerase OS=Aspergillus kawachii
(strain NBRC 4308) GN=AKAW_09265 PE=3 SV=1
Length = 1256
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 263/581 (45%), Gaps = 46/581 (7%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EYYDDMDEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS+ + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPSEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVFTPHKV-----RSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVM 205
V ++ + D ED G++P+M
Sbjct: 129 VTKKIMEGRERLVADRDEDDMGESNEDRKAHGTYLQWEQKELPADQAKEETVFIGKMPIM 188
Query: 206 VMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVS 252
+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 189 LKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPPS 247
Query: 253 NTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFS 307
TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F +
Sbjct: 248 PTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFRA 307
Query: 308 LGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVK 362
LGV SD++I++ I Y DT + + I + E F + + H +
Sbjct: 308 LGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHER 367
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++Y E M++ ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RVRYA-REIMQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRL 426
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+V F + + + +QR + +R++ + + AS +T GL+ A +TG
Sbjct: 427 DLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGN 485
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 WGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 545
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 ETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 586
>A1CG49_ASPCL (tr|A1CG49) DNA-directed RNA polymerase OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=ACLA_065630 PE=3 SV=1
Length = 1257
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 267/586 (45%), Gaps = 55/586 (9%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++F+++ +Q + G + + +
Sbjct: 11 EFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFVSSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
P+ + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPADDEVDPVVLRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVFTPHK------------VRSDKFKTGKEDY-----XXXXXXXXXXXXXXXGRLPV 204
+ ++ + +D+ + + Y G++P+
Sbjct: 129 ITKRIMEGRERLIADREDDETVPDADEDRKARGTYLQWEQKELPADQAKEETVFIGKMPI 188
Query: 205 MVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWV 251
M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 189 MLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAPP 247
Query: 252 SNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFF 306
S TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F
Sbjct: 248 SPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVFR 307
Query: 307 SLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHV 361
+LGV SD++I++ I Y DT + + I + E F + + H
Sbjct: 308 ALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNHE 367
Query: 362 KGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 421
+ ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 368 RRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKR 426
Query: 422 FXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRA 477
+V F + + + +QR + +R++ YL+ AS +T GL+ A
Sbjct: 427 LDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREI-----YLNIGIKASTLTGGLKYA 481
Query: 478 FSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWG 537
+TG W K +GV L R T++ LRRT + GK+ R H +HWG
Sbjct: 482 LATGNWGEQKKAASSKAGVSQVLSRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWG 541
Query: 538 KVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 542 LVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 587
>M5BX33_9HOMO (tr|M5BX33) DNA-directed RNA polymerase II subunit B OS=Rhizoctonia
solani AG-1 IB GN=RPB140 PE=4 SV=1
Length = 1213
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 269/563 (47%), Gaps = 55/563 (9%)
Query: 51 DMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDN 110
++ + C FFDE GLV Q++S+++F+ +Q D DL + S D +N
Sbjct: 31 EITQEDCWTIITSFFDEKGLVRQQLDSFDEFVQNTMQELVDESADLILDQS-DQHTGAEN 89
Query: 111 EHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
+ K ++FG++ L RP A+ + P+ ARL+ +TY+A + V + +V +
Sbjct: 90 DATKRYEIRFGQIYLSRPTI--TEADGSVVPVFPQEARLRNLTYSAPLYVDMTKRVLHGY 147
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFD 224
+ + + + E G++P+M+ S C +K E D C D
Sbjct: 148 EDENGETQFRPEG----NGLEERADKVWIGKVPIMLRSGFCILKGLEPKDLYDLNECPLD 203
Query: 225 HGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEI 283
GGYF+I G+EK +AQE++ ++V + I + S + +
Sbjct: 204 QGGYFIINGSEKVLIAQERMAGNHVYVFAKAQPSPISFLSEIR--------------SAV 249
Query: 284 NNGEKVL------SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
G+K L S+ ++ ++P+W++F +LGV+SD++I++ I Y +DT + + I
Sbjct: 250 EKGDKTLGNVIRASLPYIKNDIPIWVVFRALGVTSDRDILEHICYDRDDTSMLEMLKPCI 309
Query: 338 RDADEKCSGF--RKGKNALHYMEEH--------VKGIQYPPSESMEECL-NLYLFPGSSG 386
DE GF ++ NAL ++ K ++Y +E L ++ + GS
Sbjct: 310 ---DE---GFVIQERINALDFIGSRGTTTGLNKEKRLRYAQEILQKEMLPHISMAEGSE- 362
Query: 387 LNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSK 446
+KA F YM+ LLLA RR+ D+RD F KR ++ F K + +
Sbjct: 363 -TKKAFFFGYMIHRLLLAALDRRELDDRDHFGKKRLDLAGPLLASLFRMLFRKLTKDVYR 421
Query: 447 ALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPL 506
LQ+ + +R+ + + + A+ ITNGL+ + +TG W K + +GV L R
Sbjct: 422 YLQKCVESNREFQ-LRLAVKANTITNGLKYSLATGNWGDQKKSMSAKAGVSQVLNRYTFA 480
Query: 507 QTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-N 565
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S +
Sbjct: 481 STLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMSCISVGS 540
Query: 566 ISESIFPQLLDCGMEELVDDTTT 588
+S + L + G+E L ++ T
Sbjct: 541 LSGPVIEFLEEWGLESLEENVAT 563
>A8PVJ8_MALGO (tr|A8PVJ8) DNA-directed RNA polymerase OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=MGL_0889 PE=3 SV=1
Length = 1197
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 272/566 (48%), Gaps = 47/566 (8%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E++ + C + FF+E GLV QI+S+N+F++ +Q + L + S + + +
Sbjct: 8 EEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESKSLTLEQSDQHTGQAE 67
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
++ +Y ++FG++ +++P+ A+ + P+ AR + +TY+A + V V +V
Sbjct: 68 DKTRRYE-IEFGQIYMNKPQ--QTEADGSTAPLFPQEARQRNLTYSAGLHVDVSQKVLV- 123
Query: 170 HKVRSDKFKTGKEDY--XXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE-AEKG-----DC 221
K D+ + G++P+M+ S CW+ + ++G +C
Sbjct: 124 -KGEEDELDENGDQLWIPDPTQEEIVDEKVYLGKVPIMLHSHFCWLTDLPDEGKYSLNEC 182
Query: 222 DFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY----KSLNKR-----NRLI 271
FD GGYF+I G+EK +AQE++ ++V S P I + +S +R + +
Sbjct: 183 PFDSGGYFIINGSEKVLIAQERMAANHVYVFSKAPPSPITFLAEIRSAVERGGKTISTMQ 242
Query: 272 LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQN 331
+KL ++ + +NN K ++ ++ ++P+ I+F +LGV D++++ I Y DTQ+
Sbjct: 243 VKLFSRNREKSLNNTIKA-TLPYIRNDIPIVIVFRALGVVPDRDVLQHICYDFNDTQMLE 301
Query: 332 IFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG---S 384
+ I +A D + + G+ K Y +E L + P S
Sbjct: 302 MLKPCIEEAFVIQDREVALDFIGRRGTTTGLSRFKRTAY-----AQEILQKEMLPHISMS 356
Query: 385 SGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
G N +KA F YMV LLLA RR+ D+RD F KR ++ F +
Sbjct: 357 EGSNTKKAYFFGYMVHRLLLAALDRREIDDRDHFGKKRLDLAGPLLSGLFRMLFRKVTRD 416
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASI----ITNGLQRAFSTGAWTHPYKRLERTSGVVAN 499
+ + LQR + R E +L A++ ITNGL+ + +TG W K ++ +GV
Sbjct: 417 IYRHLQRCVEDQR-----EFHLQAAVRHATITNGLRYSLATGNWGDQKKAMQSKAGVSQV 471
Query: 500 LGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVT 559
L R T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 472 LNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLM 531
Query: 560 GLVSTNI-SESIFPQLLDCGMEELVD 584
+S S I L + G+ L+D
Sbjct: 532 SNISVGTPSAPIVEFLEEFGLTSLID 557
>C5JQR0_AJEDS (tr|C5JQR0) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain SLH14081) GN=BDBG_04692 PE=3 SV=1
Length = 1258
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 263/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+ +
Sbjct: 18 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSEDEI 77
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 78 DPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 135
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED+ GR+P+M+ S
Sbjct: 136 GRERLIAERDDAEQGEEDHDEERRSRGTYLHWEPKPLNEDEPEEENVFIGRMPIMLKSKY 195
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 196 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 254
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 255 AEIRSAIEKGSRILSQLSIKLFGKGDASKGGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 314
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 315 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 374
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 375 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 433
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS ++ GL+ A +TG W
Sbjct: 434 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNW 488
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 548
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 549 TPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>F2TTJ0_AJEDA (tr|F2TTJ0) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ATCC 18188 / CBS 674.68) GN=BDDG_09498 PE=3 SV=1
Length = 1258
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 263/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+ +
Sbjct: 18 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSEDEI 77
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 78 DPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 135
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED+ GR+P+M+ S
Sbjct: 136 GRERLIAERDDAEQGEEDHDEERRSRGTYLHWEPKPLNEDEPEEENVFIGRMPIMLKSKY 195
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 196 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 254
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 255 AEIRSAIEKGSRILSQLSIKLFGKGDASKGGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 314
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 315 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 374
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 375 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 433
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS ++ GL+ A +TG W
Sbjct: 434 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNW 488
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 548
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 549 TPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>C5GBN2_AJEDR (tr|C5GBN2) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=BDCG_01765 PE=3 SV=1
Length = 1258
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 263/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+ +
Sbjct: 18 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSEDEI 77
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 78 DPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 135
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED+ GR+P+M+ S
Sbjct: 136 GRERLIAERDDAEQGEEDHDEERRSRGTYLHWEPKPLNEDEPEEENVFIGRMPIMLKSKY 195
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 196 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 254
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 255 AEIRSAIEKGSRILSQLSIKLFGKGDASKGGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 314
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 315 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 374
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 375 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 433
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS ++ GL+ A +TG W
Sbjct: 434 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNW 488
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 548
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 549 TPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>Q2U279_ASPOR (tr|Q2U279) DNA-directed RNA polymerase OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=AO090038000568 PE=3 SV=1
Length = 1254
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 265/583 (45%), Gaps = 51/583 (8%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
P + + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPDEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVF------------------TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLP 203
+ ++ K R + +++ G++P
Sbjct: 129 ITKRIMEGRERSVADRDDEEIEEDEDRKARGTYLQWEQKELPADQAKEETVFI---GKVP 185
Query: 204 VMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLW 250
+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 IMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAP 244
Query: 251 VSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILF 305
S TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F
Sbjct: 245 PSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVF 304
Query: 306 FSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEH 360
+LGV SD++I++ I Y DT + + I + E F + + H
Sbjct: 305 RALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNH 364
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
+ ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F K
Sbjct: 365 ERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKK 423
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R +V F + + + +QR + +R++ + + AS +T GL+ A +T
Sbjct: 424 RLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALAT 482
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 483 GNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 542
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ V+ SE I ++ ME L
Sbjct: 543 PAETPEGQACGLVKNLALMCYVTVGTPSEPIIDFMIQRNMEVL 585
>I8IG63_ASPO3 (tr|I8IG63) DNA-directed RNA polymerase OS=Aspergillus oryzae
(strain 3.042) GN=Ao3042_06477 PE=3 SV=1
Length = 1254
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 265/583 (45%), Gaps = 51/583 (8%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
P + + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPDEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVF------------------TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLP 203
+ ++ K R + +++ G++P
Sbjct: 129 ITKRIMEGRERSVADRDDEEIEEDEDRKARGTYLQWEQKELPADQAKEETVFI---GKVP 185
Query: 204 VMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLW 250
+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 IMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAP 244
Query: 251 VSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILF 305
S TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F
Sbjct: 245 PSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVF 304
Query: 306 FSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEH 360
+LGV SD++I++ I Y DT + + I + E F + + H
Sbjct: 305 RALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNH 364
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
+ ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F K
Sbjct: 365 ERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKK 423
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R +V F + + + +QR + +R++ + + AS +T GL+ A +T
Sbjct: 424 RLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALAT 482
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 483 GNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 542
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ V+ SE I ++ ME L
Sbjct: 543 PAETPEGQACGLVKNLALMCYVTVGTPSEPIIDFMIQRNMEVL 585
>B8NK59_ASPFN (tr|B8NK59) DNA-directed RNA polymerase OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=AFLA_071080 PE=3 SV=1
Length = 1254
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 265/583 (45%), Gaps = 51/583 (8%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
E ++ E + C FFD GLVS Q++S+++FI++ +Q + G + + +
Sbjct: 11 EFYDDMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTLDQTL 70
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
P + + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 71 PPDEDEVDPVVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLG 128
Query: 162 VEVQVF------------------TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLP 203
+ ++ K R + +++ G++P
Sbjct: 129 ITKRIMEGRERSVADRDDEEIEEDEDRKARGTYLQWEQKELPADQAKEETVFI---GKVP 185
Query: 204 VMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLW 250
+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 IMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQVF-KKAP 244
Query: 251 VSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILF 305
S TP A ++ K +RL+ LKL + G + S ++ ++P+ ++F
Sbjct: 245 PSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDIPIVVVF 304
Query: 306 FSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEH 360
+LGV SD++I++ I Y DT + + I + E F + + H
Sbjct: 305 RALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSSMNH 364
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
+ ++Y E M++ L ++ RKA FL YMV LL GRR D+RD F K
Sbjct: 365 ERRVRYA-REIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKK 423
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R +V F + + + +QR + +R++ + + AS +T GL+ A +T
Sbjct: 424 RLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALAT 482
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 483 GNWGEQKKAASAKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 542
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ V+ SE I ++ ME L
Sbjct: 543 PAETPEGQACGLVKNLALMCYVTVGTPSEPIIDFMIQRNMEVL 585
>C4V8X8_NOSCE (tr|C4V8X8) DNA-directed RNA polymerase OS=Nosema ceranae (strain
BRL01) GN=NCER_100983 PE=3 SV=1
Length = 1143
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 254/547 (46%), Gaps = 66/547 (12%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF++ GLV QI+S++QF+ +Q D + V + NE K T+KFG++
Sbjct: 17 FFEQKGLVGQQIDSFDQFVKTKMQEVIDESPLITVQSTLS----AGNETRKKITLKFGQI 72
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P + A+ + P ARL+ +TY +++ + + V++ + ++G D
Sbjct: 73 YVSKPPSYT-EADGTTITLTPNEARLRDITYLSQLYIDI---------VKTTESESGVVD 122
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCW---MKEAEK---GDCDFDHGGYFLIKGAEKA 237
G LPVMV S C + E E G+C++D GGYF+I G+EK
Sbjct: 123 -------QHRYSRIPFGSLPVMVKSSYCSTYKLSEEELIKIGECEYDVGGYFIINGSEKV 175
Query: 238 FVAQEQLFLKKLWVSNTPDWA----------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
+AQE++ ++V A + K + + LKL N +
Sbjct: 176 IIAQERMASNTIYVFKKSQPASYSHYAEIRSVPEKGAKNPSAVSLKLCRNPNVIRV---- 231
Query: 288 KVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGF 347
S+ + E+P++I++ +LG SDKEI D I N+D F ++++ + +
Sbjct: 232 ---SIPYAKQEIPLFIIYRALGFLSDKEITDHIITTNDDE-----MFDLLKESILESAVV 283
Query: 348 RKGKNALHYMEEHVKGIQYPPSESMEECLNLY-------LFP--GSSGL--NRKARFLAY 396
+ AL Y+ + P S E+ +N L P G+ +KA FL Y
Sbjct: 284 QDQNVALDYIGKRAA----PVGSSREKRINFAKDLLAKELLPHIGTQEFCETKKAYFLGY 339
Query: 397 MVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDR 456
MV+ LLL GR++ D+RD + KR + + +K +Q+ + G R
Sbjct: 340 MVQKLLLVALGRKREDDRDHYGKKRMDLAGPLLASLFRSLYKKLCSETAKHMQKCIEGGR 399
Query: 457 DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTR 516
D I L AS I G + A +TG W ++ +GV L R N + T++ LRR
Sbjct: 400 DFN-IALGLKASTIAQGFRYAIATGNWGDQAHAMQSKAGVAQVLNRYNFVSTLSHLRRVN 458
Query: 517 QQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLL 575
++ GK+ R H +HWG +C TP+G+ CGLVKNLS+ +S + SE I L
Sbjct: 459 TPIEKEGKLAKPRQLHNTHWGMICPAETPEGQACGLVKNLSLMAYISVGSSSEPIVEFLE 518
Query: 576 DCGMEEL 582
+CG+E L
Sbjct: 519 ECGLESL 525
>N1JAL0_ERYGR (tr|N1JAL0) DNA-directed RNA polymerase II complex subunit
OS=Blumeria graminis f. sp. hordei DH14
GN=BGHDH14_bgh01524 PE=4 SV=1
Length = 1262
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 167/574 (29%), Positives = 268/574 (46%), Gaps = 56/574 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F++ +Q + L + + PS + +
Sbjct: 25 CWLVISAFFESKGLVSQQLDSFDEFVSTTMQELVEESSLLTLDQNNPPSSDDNPIALRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVEVQVFTPH 170
+KFG V L RP G + Q MLP+ ARL+ +TY++ + KV+V V+ P
Sbjct: 85 EIKFGTVLLSRPAMTEGDGSTQ--VMLPQEARLRNLTYSSPLYLEMTKKVSVAVERPVPL 142
Query: 171 KVRSDKF-----KTGK-------EDY----XXXXXXXXXXXXXXXGRLPVMVMSDLCWMK 214
D+ +TG+ ED G+LP+M+ S C +K
Sbjct: 143 NELDDEQHEEMQRTGEHPTRLIWEDEDGYDLEGEKSQKAPDRVFIGKLPIMLKSKYCILK 202
Query: 215 EAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGY 261
+ ++ +C +D GGYF+I G+EK +AQE Q+F KK S TP A
Sbjct: 203 DLDEDELYAWNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKPPPSPTPYIAEIR 261
Query: 262 KSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEI 316
+L K +RLI +KL + G+ + S ++ ++P+ ++F + GV SD++I
Sbjct: 262 SALEKGSRLISSMTIKLFAKGDGQRGGFGQTIKSTLPYVRTDIPIAVVFRAFGVVSDEDI 321
Query: 317 IDLIDYGNEDTQIQNIFFGSIRDA----DEKCS---GFRKGKNALHYMEEHVKGIQYPPS 369
++ I Y DTQ+ + I +A D + + ++G + E VK +
Sbjct: 322 LNHICYDRTDTQMLEMLKPCIEEAFVIQDREVALDYIGKRGSSTNLTRERRVKNAR---- 377
Query: 370 ESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXX 429
E M++ L ++ RKA FL YMV +L GRR+ D+RD F KR
Sbjct: 378 EIMQKELLPHISQKEGSETRKAFFLGYMVHKMLQCALGRRETDDRDHFGKKRLDLAGPLL 437
Query: 430 XXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKR 489
+ F + K LQR + +R+ + + ++ +TNGL+ + +TG W K
Sbjct: 438 AKLFRNLFKRLTGDVYKYLQRCVENNREFN-LALGVKSTTLTNGLKYSLATGNWGDQKKA 496
Query: 490 LERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 549
T+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+
Sbjct: 497 ASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQA 556
Query: 550 CGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
CGLVKNL++ V+ S+ I ++ ME L
Sbjct: 557 CGLVKNLALMCYVTVGTPSDPIIEFMIQRNMEVL 590
>A6R483_AJECN (tr|A6R483) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_04441 PE=3 SV=1
Length = 1743
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 262/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P++ K
Sbjct: 503 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPAEDKI 562
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 563 DPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 620
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED GR+P+M+ S
Sbjct: 621 GRERLIAERDDAEQGEEDNDEERRSRGTYLHWEPKALNEDEPEEENVFIGRMPIMLKSKY 680
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 681 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 739
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 740 AEIRSAVEKGSRILSQLSIKLFGKGDTSKSGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 799
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 800 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 859
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 860 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 918
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS ++ GL+ A +TG W
Sbjct: 919 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNW 973
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 974 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 1033
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 1034 TPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 1073
>M5E5X9_MALSM (tr|M5E5X9) Genomic scaffold, msy_sf_4 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_0831 PE=4 SV=1
Length = 1197
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 269/571 (47%), Gaps = 57/571 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E++ + C + FF+E GLV QI+S+N+F++ +Q + L + S + +
Sbjct: 8 EEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESRSLTLEQSDQHTGHAE 67
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
++ +Y ++FG++ +++P+ A+ + P+ AR + +TY+A + V V +V
Sbjct: 68 DKSRRYE-IEFGQIYMNKPQ--QTEADGSTAPLFPQEARQRNLTYSAGLHVDVSQKVLV- 123
Query: 170 HKVRSDKFKTGKED-------YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK---- 218
K + G+ D G++P+M+ S CW+ +
Sbjct: 124 ------KGEEGELDENGDQLWVPDPSREEIVDEKVYLGKVPIMLHSHFCWLTDLPDDGKY 177
Query: 219 --GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY----KSLNKR---- 267
+C FD GGYF+I G+EK +AQE++ ++V S P I + +S +R
Sbjct: 178 SLNECPFDSGGYFIINGSEKVLIAQERMAANHVYVFSKAPPSPITFLAEIRSAVERGGKT 237
Query: 268 -NRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNED 326
+ + +KL ++ + +NN K ++ ++ ++P+ I+F +LGV D+E++ I Y D
Sbjct: 238 ISTMQVKLFSRNREKSLNNTIKA-TLPYIRNDIPIVIVFRALGVVPDREVLQHICYDFND 296
Query: 327 TQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFP 382
TQ+ + I +A D + + G+ K Y +E L + P
Sbjct: 297 TQMLEMLKPCIEEAFVIQDREVALDFIGRRGTTTGLSRFKRTTY-----AQEILQKEMLP 351
Query: 383 G---SSGLN-RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFA 438
S G N +KA F YMV LLLA RR+ D+RD F KR ++ F
Sbjct: 352 HISMSEGSNTKKAYFFGYMVHRLLLAALDRREIDDRDHFGKKRLDLAGPLLSGLFRMLFR 411
Query: 439 HARKRMSKALQRDLNGDRDVRPIEHYLDASI----ITNGLQRAFSTGAWTHPYKRLERTS 494
+ + + LQR + + E +L A++ ITNGL+ + +TG W K ++ +
Sbjct: 412 KVTRDIYRHLQRCVEDQK-----EFHLQAAVRHATITNGLRYSLATGNWGDQKKAMQSKA 466
Query: 495 GVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK 554
GV L R T++ LRR + GK+ R H +HWG VC TP+G+ CGLVK
Sbjct: 467 GVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVK 526
Query: 555 NLSVTGLVSTNI-SESIFPQLLDCGMEELVD 584
NLS+ +S S I L + G+ LVD
Sbjct: 527 NLSLMSNISVGTPSAPIVEFLEEFGLNSLVD 557
>I7AGE0_ENCRO (tr|I7AGE0) DNA-directed RNA polymerase OS=Encephalitozoon romaleae
(strain SJ-2008) GN=EROM_100120 PE=3 SV=1
Length = 1141
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 260/552 (47%), Gaps = 58/552 (10%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF++ GLV Q++S++QF+ +Q + N + E K TV+FG++
Sbjct: 17 FFEQKGLVRQQLDSFDQFVRTKMQEVINE----NPAIIVQSAPTAGTEIQKRITVRFGQI 72
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P + ++ + + P AR++ +TYA+ + + V + + V DK K +
Sbjct: 73 YVSKPPIYT-ESDGRTITVFPNEARIRDLTYASPLFIDVIKETVSELGV-VDKHKYSRVP 130
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
+ G LPVM+ S C + + G+C +D GGYF++ G+EK
Sbjct: 131 F---------------GSLPVMLRSSYCVLHGLGDKDLIDLGECPYDQGGYFIVNGSEKV 175
Query: 238 FVAQEQLFLKKLWVSNTPDWA----------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
VAQE++ ++V A + KS + L +KL + G
Sbjct: 176 IVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSP-------GA 228
Query: 288 KVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGF 347
+S+ + ++P+++L+ +LG SDKEIID I Y ++D F ++++ E+ +
Sbjct: 229 IRVSLPLVKQDIPLFVLYRALGFLSDKEIIDHILYEDDDE-----MFELLKESIEEGTVV 283
Query: 348 RKGKNALHYMEEHVKGIQYPPSESMEECLNLY---LFP--GSSGL--NRKARFLAYMVKS 400
+ AL Y+ + + P + + +L + P G+ +KA F+ Y+V+
Sbjct: 284 QDQNVALDYIGKRSAPVGTPQEKRITIARDLLAKEVLPHIGTQEFCETKKAYFIGYIVQR 343
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + KR + F ++ +Q+ + R+
Sbjct: 344 LLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFN- 402
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
I L ASIIT G + A +TG W K ++ +GV L R N + T++ LRR ++
Sbjct: 403 IALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIE 462
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGM 579
GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S S + L +CG+
Sbjct: 463 KEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGV 522
Query: 580 EELVDDTTTFLS 591
E L + +T LS
Sbjct: 523 ESLEEISTLQLS 534
>K0KEY7_WICCF (tr|K0KEY7) DNA-directed RNA polymerase OS=Wickerhamomyces ciferrii
(strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC
0793 / NRRL Y-1031) GN=BN7_3254 PE=3 SV=1
Length = 1241
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 168/560 (30%), Positives = 261/560 (46%), Gaps = 36/560 (6%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
ED+ C FF E GLVS Q++S+++FI +Q L + + D
Sbjct: 37 EDITSEDCWTVISSFFREKGLVSQQLDSFDEFINTSIQELVWEDSTLILEQPAQHITEDD 96
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
N + KY +KFGK+ L RP Q+ M P+ ARL+ +TYAA + V ++ +
Sbjct: 97 NINRKYE-IKFGKIFLSRPTMTESDGTTQQ--MFPQEARLRNLTYAAPLFVEMDKITYET 153
Query: 170 HKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDCDF 223
+D E GR+P+M+ S C +++ E+ +C +
Sbjct: 154 IDGTNDWTVIKDEVEDELDDDGNDNKKVYIGRVPIMLKSKYCLLRDLEEEEMYSLKECPY 213
Query: 224 DHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----L 272
D GGYF+I G+EK +AQE Q+F KK S A +L K +RLI +
Sbjct: 214 DMGGYFVINGSEKVLIAQERSAANIVQVF-KKSAPSPVSHVAEIRSALEKGSRLISSMQI 272
Query: 273 KLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQN 331
KL G ++ +G + ++ ++ ++P+ I+F +LG+ D +I++ I Y D Q+
Sbjct: 273 KLYGR---DDKGSGRTIKATLPYIKQDIPIVIVFRALGIVPDGDILEHICYDQNDWQMFE 329
Query: 332 IFFGS------IRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSS 385
+ I+D + + NAL E K IQY +E L ++
Sbjct: 330 MLKPCVEEGFVIQDREVALDFIGRRGNALGIRRE--KRIQYAKDILQKEFLP-HITQQEG 386
Query: 386 GLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMS 445
+RKA FL YMV LLL R+ D+RD F KR ++ F + +
Sbjct: 387 FESRKAFFLGYMVNRLLLCALERKPQDDRDHFGKKRLDLAGPLLANLFRILFKKLTRDIY 446
Query: 446 KALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNP 505
+ +QR + D D ++ + A+ IT+GL+ + +TG W K + +GV L R
Sbjct: 447 RYMQRSVETDTDFN-LKLAVKATTITSGLKYSLATGNWGEQKKAMSSRAGVSQVLNRYTY 505
Query: 506 LQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTN 565
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 506 SSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVG 565
Query: 566 I-SESIFPQLLDCGMEELVD 584
S+ I L + GME L D
Sbjct: 566 SGSDPIIYFLEEWGMEPLED 585
>K6UQ70_9APIC (tr|K6UQ70) DNA-directed RNA polymerase OS=Plasmodium cynomolgi
strain B GN=PCYB_041460 PE=3 SV=1
Length = 1335
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 255/563 (45%), Gaps = 51/563 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYD-PSKKGDNEHFKYATVKFGK 122
FF HGLV+ QI SYN FI +Q D + + P S + DN++ Y+ +KFG+
Sbjct: 43 FFGSHGLVNQQIESYNDFIEYRMQEIIDEHPHIEIRPQPQYRSDRDDNKNVMYS-LKFGQ 101
Query: 123 VTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKE 182
++LDRP + N + P+ ARL+ +TY++ + + +E + + ++ K
Sbjct: 102 LSLDRPFY--DERNLTNKNLWPQEARLRNLTYSSAIYIDIEQSTYVVEEGSKNQILKEKF 159
Query: 183 DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEK 236
Y GR+P+M+ S CW K A+ G+C FD GGYF++ G EK
Sbjct: 160 VYERINL----------GRIPLMLKSMFCWTKGLPESEIADMGECAFDQGGYFIVNGGEK 209
Query: 237 AFVAQEQL-------FLKKL-----WVSNTPDW-----AIGYKSLNKRNRLILKLVGNSK 279
VAQE++ F KK WV+ A S+ + + + G
Sbjct: 210 VLVAQERMAHNFIYVFKKKQPSKFGWVAEIRSQMERSQATSAFSVKMKTKTGSRGSGGGG 269
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
G+ V ++ ++ E+ V ILF +LG +SD++I+ I Y D + N ++R+
Sbjct: 270 SSARTGGQLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDFNDKMMIN----TLRE 325
Query: 340 ADEKCSGFRKGKNALHYM--------EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKA 391
E+C + L ++ K I Y +E L ++ G ++K+
Sbjct: 326 TLEECIDYPTQDICLDFIGKRGPTVGASREKRILYAKELLRKEVLP-HMGTGPGVESKKS 384
Query: 392 RFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRD 451
F+ YM+ LLLA GR K D+RD F KR +F K + + LQR
Sbjct: 385 YFIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFSTYFRKMAKDVKRVLQRQ 444
Query: 452 LNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAE 511
++ ++ S IT G+Q +TG W +GV L R ++
Sbjct: 445 IDNNKPFDVAGAVRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSSCLSH 504
Query: 512 LRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-ESI 570
LRR + GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S +I
Sbjct: 505 LRRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTSTNNI 564
Query: 571 FPQLLDCGMEELVDDTTTFLSKK 593
F LL+ G+E L + + +K
Sbjct: 565 FEFLLEWGLESLDEVPPQLMKEK 587
>F0UK28_AJEC8 (tr|F0UK28) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H88) GN=HCEG_05083 PE=3 SV=1
Length = 1307
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 263/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P++ +
Sbjct: 120 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPAEDEI 179
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 180 DPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 237
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED GR+P+M+ S
Sbjct: 238 GRERLIAERDDAEQGEEDNDEERRSRGTYLHWEPKALNEDEPEEENVFIGRMPIMLKSKY 297
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 298 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 356
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 357 AEIRSAVEKGSRILSQLSIKLFGKGDTSKGGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 416
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 417 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 476
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 477 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 535
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS +++GL+ A +TG W
Sbjct: 536 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSSGLKYALATGNW 590
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 591 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 650
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 651 TPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 690
>O96236_PLAF7 (tr|O96236) DNA-directed RNA polymerase OS=Plasmodium falciparum
(isolate 3D7) GN=PFB0715w PE=3 SV=3
Length = 1340
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 255/551 (46%), Gaps = 53/551 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD---NEHFKYATVKF 120
FF HGLV+ QI SYN FI +Q D + + P P + D N++ Y+ +KF
Sbjct: 43 FFGSHGLVNQQIESYNDFIEYRMQEIIDEHPKIEIRPQ--PQYRTDRDENDNIIYS-LKF 99
Query: 121 GKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTG 180
G+++LDRP + N + P+ ARL+ +TY++ + + +E + +V
Sbjct: 100 GQLSLDRPFY--DEKNLSNKNLWPQEARLRNLTYSSAIYIDIEQSTYIIDEVTKKPVLKE 157
Query: 181 KEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGA 234
K Y GR+P+M+ S CW K A+ G+C +D GGYF++ G
Sbjct: 158 KFIYERINL----------GRIPLMLKSMFCWTKGLPENEIADMGECSYDQGGYFIVNGG 207
Query: 235 EKAFVAQEQLFLKKLWV--SNTPD---WAIGYKSLNKRNRLI----LKL---VGNSKF-E 281
EK VAQE++ ++V P W +S +R++ +K+ G S++
Sbjct: 208 EKVLVAQERMANNFIYVFKKKQPSKFGWVAEIRSQMERSQATSGFSVKMKTRSGGSQYGS 267
Query: 282 EINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDAD 341
+ G+ V ++ ++ E+ V ILF +LG +SD++I+ I Y D + ++R+
Sbjct: 268 NKSGGQLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDFND----KLMINALRETL 323
Query: 342 EKCSGFRKGKNALHYM--------EEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKAR 392
E+C + L ++ K I Y +E L ++ PG ++K+
Sbjct: 324 EECIEYPTQDVCLDFIGKRGPTVGASREKRILYAKELLRKEVLPHMGTHPGVE--SKKSY 381
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
F+ YM+ LLLA GR K D+RD F KR +F K + + LQR +
Sbjct: 382 FIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFSTYFRKMAKDVRRVLQRQI 441
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
+ ++ S IT G+Q +TG W +GV L R ++ L
Sbjct: 442 DNNKPFDVAGAIRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSSCLSHL 501
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-ESIF 571
RR + GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S +I+
Sbjct: 502 RRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTSTNNIY 561
Query: 572 PQLLDCGMEEL 582
L + G+E L
Sbjct: 562 EFLTEWGLESL 572
>Q1HDJ9_9PLEO (tr|Q1HDJ9) DNA-directed RNA polymerase OS=Phaeosphaeria avenaria
f. sp. tritici GN=RPB2 PE=3 SV=1
Length = 1262
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/565 (29%), Positives = 248/565 (43%), Gaps = 63/565 (11%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSK 106
G ++ C FFD GLVS Q++SY++F +Q G L YDP +
Sbjct: 17 GGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDE 76
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
D + +KFG+V L RP G + + P ARL+ +TY+ M + ++
Sbjct: 77 DSDPIIKRRYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRI 134
Query: 167 FTPHKVR------------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMS 208
+ + + K +ED G+LPVM+ S
Sbjct: 135 MVAKETQVVVEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRS 190
Query: 209 DLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+LC ++ +C +D GGYF+I G+EK +AQE Q+F KK N P
Sbjct: 191 ELCHLRNQSDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKKQ--GNVP 248
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY------FLGVEVPVWILF 305
A ++ K RLI +K NS G++ + ++ EVP+ I+F
Sbjct: 249 WTAEIRSAVEKGTRLISSFNIKWADNS-LGGPGQGKRAPGPFAYAMLPYIKTEVPMAIVF 307
Query: 306 FSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKG 363
+LG+ SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ + +G
Sbjct: 308 RALGIVSDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGANQG 363
Query: 364 IQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRN 419
+ + + + P S RKA F YM+ LL GRR D+RD F
Sbjct: 364 TRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGK 423
Query: 420 KRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFS 479
KR ++ F K + K LQR + D ++ + ASIITNGL+ + +
Sbjct: 424 KRLDLAGPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYSLA 482
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K +GV L R T++ LRRT V GK+ R H SHWG V
Sbjct: 483 TGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLV 542
Query: 540 CFLSTPDGENCGLVKNLSVTGLVST 564
C TP+G+ CGLVKNLS+ VS
Sbjct: 543 CPAETPEGQACGLVKNLSLMCYVSV 567
>K1XWJ2_MARBU (tr|K1XWJ2) DNA-directed RNA polymerase OS=Marssonina brunnea f.
sp. multigermtubi (strain MB_m1) GN=MBM_04681 PE=3 SV=1
Length = 1266
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 265/576 (46%), Gaps = 60/576 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F++ +Q + L + + PS + +
Sbjct: 32 CWMVISSFFEAKGLVSQQVDSFDEFVSTTMQELVEENSQLTLDQNNPPSADENPIALRRY 91
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVEVQVFTPH 170
+KFG V L RP G Q MLP+ ARL+ +TY++ + V+V V+ P
Sbjct: 92 EIKFGTVLLSRPAMTEGDGTTQ--VMLPQEARLRNLTYSSPLYLEMTKNVSVAVERNVPL 149
Query: 171 KVRSDKFKT------------------GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCW 212
D+ + G+E G+LP+M+ S C
Sbjct: 150 NELDDEQEAEMAATGIHPTRLVWEDEDGRE--AGPDKIEPTPDRVFIGKLPIMLKSKYCI 207
Query: 213 MKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAI 259
+K+ ++ D C +D GGYF+I G+EK +AQE Q+F K L S TP A
Sbjct: 208 LKDLDEDDLYAWNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFQKSL-PSPTPYVAE 266
Query: 260 GYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDK 314
+L K +RLI +KL G+ + S ++ +VP+ ++F +LGV SD+
Sbjct: 267 IRSALEKGSRLISQMSIKLFSKGDGGRGGFGQTIKSTLPYIRADVPIAVVFRALGVVSDE 326
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYMEEHVKGIQYP 367
+I++ I Y DTQ+ + I +A E F ++G+N+ ++ VK +
Sbjct: 327 DILNHICYDRNDTQMLEMLKPCIEEAFVIQDREVALDFIGKRGQNSTLTRDKRVKYAR-- 384
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+ M++ L ++ RKA FL YMV +L GRR+ D+RD F KR
Sbjct: 385 --DIMQKELLPHISQSEGSETRKAFFLGYMVHKMLQCALGRRETDDRDHFGKKRLDLAGP 442
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPY 487
+ F + K L+ + +++ + + A+ +TNGL+ + +TG W
Sbjct: 443 LLAKLFRGLFRRLTSDVYKYLKLCVENNKEFN-LALGVKATTMTNGLKYSLATGNWGDQK 501
Query: 488 KRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 547
K T+GV L R T++ LRRT + GK+ R H +HWG VC TP+G
Sbjct: 502 KAASSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEG 561
Query: 548 ENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+ CGLVKNL++ V+ S+ I ++ ME L
Sbjct: 562 QACGLVKNLALMCYVTVGTPSDPIIEFMIQRNMEVL 597
>C0NB61_AJECG (tr|C0NB61) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
GN=HCBG_00357 PE=3 SV=1
Length = 1307
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 262/580 (45%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KG 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P++ +
Sbjct: 120 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPAEDEI 179
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT 168
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 180 DPVVLRRYELKFGTVMLARPSVTEG--DGATSIMLPQEARLRNLTYASPLYLGITKRVTE 237
Query: 169 PHK---VRSDKFKTGKEDYXXXXXX---------------XXXXXXXXXGRLPVMVMSDL 210
+ D + G+ED GR+P+M+ S
Sbjct: 238 GRERLIAERDDAEQGEEDNDEERRSRGTYLHWEPKALNEDEPEEENVFIGRMPIMLKSKY 297
Query: 211 CWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 298 CILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYV 356
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ +KL G + G + S ++ ++P+ ++F +LGV S
Sbjct: 357 AEIRSAVEKGSRILSQLSIKLFGKGDTSKGGFGPTIRSTLPYIKTDIPIVVVFRALGVVS 416
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H K ++Y
Sbjct: 417 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRVRYA 476
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 477 RDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 535
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAW 483
++ F K + K +QR + +R + YL+ AS ++ GL+ A +TG W
Sbjct: 536 LLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNW 590
Query: 484 THPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 543
K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 591 GEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAE 650
Query: 544 TPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 651 TPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 690
>F2QTX9_PICP7 (tr|F2QTX9) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL
Y-11430 / Wegner 21-1) GN=PP7435_Chr2-1181 PE=3 SV=1
Length = 1227
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 262/556 (47%), Gaps = 39/556 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+E GLVS Q++S+++F+ +Q L + + + DN + +Y
Sbjct: 17 CWTVISAFFEEKGLVSQQLDSFDEFMETSIQDLVWEEPRLILDQPAQHTNEKDNINKRYE 76
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
++FGK+ L RP A+ M P+ ARL+ +TY++ + + +E +FT +
Sbjct: 77 -IRFGKIYLSRPTM--TEADGTTHAMFPQEARLRNLTYSSPVYLDMEKSMFTSIDDEGNP 133
Query: 177 FKT--GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGY 228
T ++ + G++P+M+ S C ++ ++ D C +D GGY
Sbjct: 134 NATLDWQQVHEPIKDGVEEGNKVHIGKVPIMLRSKFCSLRTLDEVDLYKMKECPYDMGGY 193
Query: 229 FLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGN 277
F+I G+EK +AQE Q+F KK S A +L K +RLI +KL G
Sbjct: 194 FVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSALEKGSRLISTMQIKLYGR 252
Query: 278 SKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS 336
E+ G + ++ ++ ++P+ I+F +LGV D EI+ I Y D Q+ +
Sbjct: 253 ---EDKGTGRTIKATLPYVKQDIPIVIVFRALGVVPDGEILQHICYDENDWQMLEMLKPC 309
Query: 337 IRDA-----DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNR 389
I + E F R+G AL E K IQY +E L ++ R
Sbjct: 310 IEEGFVIQDKEVALDFIGRRGSAALGIRRE--KRIQYAKDILQKELLP-HITQEEGFETR 366
Query: 390 KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQ 449
K FL YMV LLL R+ D+RD F KR ++ F + + + +Q
Sbjct: 367 KTFFLGYMVNRLLLCALERKDQDDRDHFGKKRLDLAGPLLANLFRILFRKLTREIYRYMQ 426
Query: 450 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 509
R + DRD + + ++ IT+GL+ + +TG W K + +GV L R T+
Sbjct: 427 RCIETDRDFN-LNLAVKSTTITSGLKYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSSTL 485
Query: 510 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLS-VTGLVSTNISE 568
+ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS ++G+ + SE
Sbjct: 486 SHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLLSGISIGSPSE 545
Query: 569 SIFPQLLDCGMEELVD 584
I L + GME L D
Sbjct: 546 PIINFLEEWGMEPLED 561
>C4QZQ7_PICPG (tr|C4QZQ7) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr2-1_0125 PE=3 SV=1
Length = 1227
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 262/556 (47%), Gaps = 39/556 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+E GLVS Q++S+++F+ +Q L + + + DN + +Y
Sbjct: 17 CWTVISAFFEEKGLVSQQLDSFDEFMETSIQDLVWEEPRLILDQPAQHTNEKDNINKRYE 76
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
++FGK+ L RP A+ M P+ ARL+ +TY++ + + +E +FT +
Sbjct: 77 -IRFGKIYLSRPTM--TEADGTTHAMFPQEARLRNLTYSSPVYLDMEKSMFTSIDDEGNP 133
Query: 177 FKT--GKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGY 228
T ++ + G++P+M+ S C ++ ++ D C +D GGY
Sbjct: 134 NATLDWQQVHEPIKDGVEEGNKVHIGKVPIMLRSKFCSLRTLDEVDLYKMKECPYDMGGY 193
Query: 229 FLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGN 277
F+I G+EK +AQE Q+F KK S A +L K +RLI +KL G
Sbjct: 194 FVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSALEKGSRLISTMQIKLYGR 252
Query: 278 SKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS 336
E+ G + ++ ++ ++P+ I+F +LGV D EI+ I Y D Q+ +
Sbjct: 253 ---EDKGTGRTIKATLPYVKQDIPIVIVFRALGVVPDGEILQHICYDENDWQMLEMLKPC 309
Query: 337 IRDA-----DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNR 389
I + E F R+G AL E K IQY +E L ++ R
Sbjct: 310 IEEGFVIQDKEVALDFIGRRGSAALGIRRE--KRIQYAKDILQKELLP-HITQEEGFETR 366
Query: 390 KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQ 449
K FL YMV LLL R+ D+RD F KR ++ F + + + +Q
Sbjct: 367 KTFFLGYMVNRLLLCALERKDQDDRDHFGKKRLDLAGPLLANLFRILFRKLTREIYRYMQ 426
Query: 450 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 509
R + DRD + + ++ IT+GL+ + +TG W K + +GV L R T+
Sbjct: 427 RCIETDRDFN-LNLAVKSTTITSGLKYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSSTL 485
Query: 510 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLS-VTGLVSTNISE 568
+ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS ++G+ + SE
Sbjct: 486 SHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLLSGISIGSPSE 545
Query: 569 SIFPQLLDCGMEELVD 584
I L + GME L D
Sbjct: 546 PIINFLEEWGMEPLED 561
>E0S9G2_ENCIT (tr|E0S9G2) DNA-directed RNA polymerase OS=Encephalitozoon
intestinalis (strain ATCC 50506) GN=Eint_100190 PE=3
SV=1
Length = 1140
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 261/552 (47%), Gaps = 58/552 (10%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF++ GLV Q++S++QF+ +Q D + V + E K TV+FG++
Sbjct: 17 FFEQKGLVRQQLDSFDQFVKTKMQEVIDESPAIIV----QSAPTAGIETQKRITVRFGQI 72
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P + ++ + + P AR++ +TYA+ + + V + + V DK K +
Sbjct: 73 YVSKPPIYT-ESDGRTITVFPNEARIRDLTYASPLFIDVTKETISELGV-VDKHKYSRVP 130
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWM------KEAEKGDCDFDHGGYFLIKGAEKA 237
+ G LPVM+ S C + + G+C +D GGYF++ G+EK
Sbjct: 131 F---------------GSLPVMLRSSYCVLYGLSDKDLIDLGECPYDQGGYFIVNGSEKV 175
Query: 238 FVAQEQLFLKKLWVSNTPDWA----------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
VAQE++ ++V A + KS + L +KL + G
Sbjct: 176 IVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSP-------GV 228
Query: 288 KVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGF 347
+S+ + ++P+++L+ +LG SDKEIID I Y ++D F ++++ E+
Sbjct: 229 IRVSLPLVKQDIPLFVLYRALGFLSDKEIIDHILYEDDDE-----MFELLKESIEEGMVV 283
Query: 348 RKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFP--GSSGL--NRKARFLAYMVKS 400
+ AL Y+ + + P + + ++ L + P G+ +KA F+ Y+V+
Sbjct: 284 QDQNVALDYIGKRSAPVGTPQEKRIIIAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQR 343
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GR+ D+RD + KR + F ++ +Q+ + R+
Sbjct: 344 LLLVALGRKNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFN- 402
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
I L ASIIT G + A +TG W K ++ +GV L R N + T++ LRR ++
Sbjct: 403 IALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIE 462
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGM 579
GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S S + L +CG+
Sbjct: 463 KEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLVEFLEECGV 522
Query: 580 EELVDDTTTFLS 591
E L + +T L+
Sbjct: 523 ESLEEISTPQLN 534
>N4X6L4_COCHE (tr|N4X6L4) Uncharacterized protein OS=Bipolaris maydis ATCC 48331
GN=COCC4DRAFT_140984 PE=4 SV=1
Length = 1262
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 250/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P + + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYNPDEDDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + ++ P ARL+ +TY+ M +E ++ + R
Sbjct: 87 RYEIKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRIMVAREGRD 144
Query: 174 ----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 145 PEGDEDEDMEGGYTGGASQIRWERED---MPMDDGTAARVFIGKLPVMLRSELCHLRAQS 201
Query: 218 KGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS- 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 202 DADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSA 258
Query: 264 LNKRNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDK 314
+ K RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+
Sbjct: 259 VEKGTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDE 316
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESM 372
EI+ I Y DTQ+ + SI E+ S + + AL ++ + G + +
Sbjct: 317 EILSHIVYDRTDTQMLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTKDRRLKFA 372
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 373 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 432
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W K
Sbjct: 433 IANLFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKK 491
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 492 AASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 552 ACGLVKNLSLMCYVSV 567
>M2SRF8_COCSA (tr|M2SRF8) DNA-directed RNA polymerase OS=Bipolaris sorokiniana
ND90Pr GN=COCSADRAFT_252499 PE=3 SV=1
Length = 1262
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 250/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P + + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYNPDEDDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + ++ P ARL+ +TY+ M +E ++ + R
Sbjct: 87 RYEIKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRIMVAREGRD 144
Query: 174 ----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 145 PEGDEDEDMEGGYTGGASQIRWERED---MPMDDGTAARVFIGKLPVMLRSELCHLRAQS 201
Query: 218 KGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS- 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 202 DADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSA 258
Query: 264 LNKRNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDK 314
+ K RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+
Sbjct: 259 VEKGTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDE 316
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESM 372
EI+ I Y DTQ+ + SI E+ S + + AL ++ + G + +
Sbjct: 317 EILSHIVYDRTDTQMLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTRDRRLKFA 372
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 373 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 432
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W K
Sbjct: 433 IANLFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKK 491
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 492 AASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 552 ACGLVKNLSLMCYVSV 567
>M7UPJ1_BOTFU (tr|M7UPJ1) Putative dna-directed rna polymerase ii subunit rpb2
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_2490
PE=4 SV=1
Length = 1260
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 261/569 (45%), Gaps = 47/569 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F+ +Q + L + + PS + +
Sbjct: 25 CWTVISSFFEAKGLVSQQLDSFDEFVQTTMQELVEENSQLTLDQNNPPSSHDNPIALRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRS 174
+KFG + L RP G + Q MLP+ ARL+ +TY++ + ++T QV V
Sbjct: 85 EIKFGTIMLSRPAMTEGDGSTQ--VMLPQEARLRNLTYSSPLYIEMTKSTQVAVERPVPL 142
Query: 175 DKFKTGKE---------------DYX----XXXXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
++ +E +Y G+LP+M+ S+ C +K
Sbjct: 143 NELDDEQEAEMVNGGEHPTRLVWEYEDGDPEGPKGAPLPEQVYIGKLPMMLKSEFCILKG 202
Query: 216 AEK------GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTP-DWAIGY-----KS 263
++ +C +D GGYF+I G+EK +AQE+ + V P + A+ Y +
Sbjct: 203 LDEDELYGWNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPANSAVSYLAEIRSA 262
Query: 264 LNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIID 318
L K +RLI +KL G+ V S ++ ++P+ I+F +LGV SD++I++
Sbjct: 263 LEKGSRLISSLQIKLYDKGDSNRGGFGKTVKSTLPYIKADIPIAIVFRALGVVSDEDILN 322
Query: 319 LIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEE 374
I Y DTQ+ + I +A D + + GK K I+Y + M++
Sbjct: 323 HICYDRNDTQMLEMLKPCIEEAFVIQDREVALDFIGKRGNGTSLTRDKRIKYA-RDIMQK 381
Query: 375 CLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXK 434
L ++ RKA FL YMV LL GRR+ D+RD F KR +
Sbjct: 382 ELLPHISQKEGSETRKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFR 441
Query: 435 VHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTS 494
F + + LQR + +R+ + + ++ ITNGL+ + +TG W K T+
Sbjct: 442 NLFRRLTTDVYRYLQRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTA 500
Query: 495 GVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK 554
GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVK
Sbjct: 501 GVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVK 560
Query: 555 NLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
NL++ V+ S+ I ++ ME L
Sbjct: 561 NLALMCYVTVGTPSDPIVEFMIQRNMEVL 589
>G2XV39_BOTF4 (tr|G2XV39) DNA-directed RNA polymerase OS=Botryotinia fuckeliana
(strain T4) GN=BofuT4_P059390.1 PE=3 SV=1
Length = 1260
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 261/569 (45%), Gaps = 47/569 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F+ +Q + L + + PS + +
Sbjct: 25 CWTVISSFFEAKGLVSQQLDSFDEFVQTTMQELVEENSQLTLDQNNPPSSHDNPIALRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRS 174
+KFG + L RP G + Q MLP+ ARL+ +TY++ + ++T QV V
Sbjct: 85 EIKFGTIMLSRPAMTEGDGSTQ--VMLPQEARLRNLTYSSPLYIEMTKSTQVAVERPVPL 142
Query: 175 DKFKTGKE---------------DYX----XXXXXXXXXXXXXXGRLPVMVMSDLCWMKE 215
++ +E +Y G+LP+M+ S+ C +K
Sbjct: 143 NELDDEQEAEMVNGGEHPTRLVWEYEDGDPEGPKGAPLPEQVYIGKLPMMLKSEFCILKG 202
Query: 216 AEK------GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTP-DWAIGY-----KS 263
++ +C +D GGYF+I G+EK +AQE+ + V P + A+ Y +
Sbjct: 203 LDEDELYGWNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPANSAVSYLAEIRSA 262
Query: 264 LNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIID 318
L K +RLI +KL G+ V S ++ ++P+ I+F +LGV SD++I++
Sbjct: 263 LEKGSRLISSLQIKLYDKGDSNRGGFGKTVKSTLPYIKADIPIAIVFRALGVVSDEDILN 322
Query: 319 LIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEE 374
I Y DTQ+ + I +A D + + GK K I+Y + M++
Sbjct: 323 HICYDRNDTQMLEMLKPCIEEAFVIQDREVALDFIGKRGNGTSLTRDKRIKYA-RDIMQK 381
Query: 375 CLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXK 434
L ++ RKA FL YMV LL GRR+ D+RD F KR +
Sbjct: 382 ELLPHISQKEGSETRKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRLDLAGPLLAKLFR 441
Query: 435 VHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTS 494
F + + LQR + +R+ + + ++ ITNGL+ + +TG W K T+
Sbjct: 442 NLFRRLTTDVYRYLQRCVENNREFN-LTLGVKSTTITNGLKYSLATGNWGDQKKAASSTA 500
Query: 495 GVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK 554
GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVK
Sbjct: 501 GVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVK 560
Query: 555 NLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
NL++ V+ S+ I ++ ME L
Sbjct: 561 NLALMCYVTVGTPSDPIVEFMIQRNMEVL 589
>Q1WMR3_COPDI (tr|Q1WMR3) DNA-directed RNA polymerase OS=Coprinellus disseminatus
GN=RPB2 PE=3 SV=1
Length = 1241
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 150/559 (26%), Positives = 267/559 (47%), Gaps = 41/559 (7%)
Query: 51 DMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDN 110
++ + C FFD+ GLV Q++S+++F+ +Q D DL + D D
Sbjct: 46 EITQEDCWTVITSFFDQKGLVRQQLDSFDEFVQNTMQELVDENADL-ILDQADQHTGHDT 104
Query: 111 EHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT-- 168
+ + +KFG++ L RP A+ F + P+ ARL+ +TY++ + V ++ +V
Sbjct: 105 DMTRRYEIKFGQIYLSRPTV--TEADGSVFPLFPQEARLRNLTYSSPLYVEMKKRVLIGR 162
Query: 169 --PHKVRSD-KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKG 219
P V D +++T +ED G++P+M+ S C + + +
Sbjct: 163 EDPDGVPGDIQWETEQED-------TGEPEKIWIGKVPIMLRSSFCILHQLRDNELYDLN 215
Query: 220 DCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI-- 271
+C +D GGYF+I G+EK +AQE++ ++V + I + ++ K + I
Sbjct: 216 ECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQ 275
Query: 272 --LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+K+ ++ + N K ++ ++ V++P+W++F +LGV SD++I++ I Y +D Q+
Sbjct: 276 FQVKMFHRNQERSMGNVMKA-TIPYIKVDIPIWVVFRALGVISDRDILEHICYDMQDAQM 334
Query: 330 QNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGS 384
+ I D D + + G + I+Y +E L ++ + GS
Sbjct: 335 LEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHISMAEGS 394
Query: 385 SGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRM 444
++KA F YM+ LLLA RR+ D+RD F KR ++ F K +
Sbjct: 395 E--SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKLTKDV 452
Query: 445 SKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 504
+ LQ+ + ++ + + ITNGL+ + +TG W K + +GV L R
Sbjct: 453 YRYLQKCVETHKEFN-LTLAVKQQTITNGLKYSLATGNWGDQKKTMSSKAGVSQVLNRYT 511
Query: 505 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST 564
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S
Sbjct: 512 YASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISV 571
Query: 565 -NISESIFPQLLDCGMEEL 582
+ S + L + G+E L
Sbjct: 572 GSYSAPVIEFLEEWGLESL 590
>Q1HDK3_9PLEO (tr|Q1HDK3) DNA-directed RNA polymerase OS=Phaeosphaeria sp.
S-93-48 GN=RPB2 PE=3 SV=1
Length = 1262
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 246/558 (44%), Gaps = 65/558 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L YDP + D +
Sbjct: 25 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDEDSDPIIKR 84
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + + P ARL+ +TY+ M + ++ + +
Sbjct: 85 RYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRIMVAKETQV 142
Query: 174 -----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA 216
+ K +ED G+LPVM+ S+LC ++
Sbjct: 143 VAEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRSELCHLRNQ 198
Query: 217 EK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS 263
+C +D GGYF+I G+EK +AQE Q+F KK N P A +
Sbjct: 199 SDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKKQ--GNVPWTAEIRSA 256
Query: 264 LNKRNRLILKLVGNSKFEEIN-----NGEKVLSVY------FLGVEVPVWILFFSLGVSS 312
+ K RLI N K+ E + G++ + ++ EVP+ I+F +LG+ S
Sbjct: 257 VEKGTRLISSF--NIKWAENSLGGPGQGKRAPGPFAYAMLPYIKTEVPMAIVFRALGIVS 314
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSE 370
D+EI+ I Y DTQ+ + SI E+ + + + AL ++ + +G + +
Sbjct: 315 DEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGANQGTRDRRLK 370
Query: 371 SMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 371 FARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAG 430
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHP 486
++ F K + K LQR + D ++ + ASIITNGL+ + +TG W
Sbjct: 431 PLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGDQ 489
Query: 487 YKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 546
K +GV L R T++ LRRT V GK+ R H SHWG VC TP+
Sbjct: 490 KKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPE 549
Query: 547 GENCGLVKNLSVTGLVST 564
G+ CGLVKNLS+ VS
Sbjct: 550 GQACGLVKNLSLMCYVSV 567
>M2UG86_COCHE (tr|M2UG86) DNA-directed RNA polymerase OS=Bipolaris maydis C5
GN=COCHEDRAFT_72858 PE=3 SV=1
Length = 1208
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 250/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P + + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYNPDEDDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + ++ P ARL+ +TY+ M +E ++ + R
Sbjct: 87 RYEIKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRIMVAREGRD 144
Query: 174 ----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 145 PEGDEDEDMEGGYTGGASQIRWERED---MPMDDGTAARVFIGKLPVMLRSELCHLRAQS 201
Query: 218 KGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS- 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 202 DADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSA 258
Query: 264 LNKRNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDK 314
+ K RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+
Sbjct: 259 VEKGTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDE 316
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESM 372
EI+ I Y DTQ+ + SI E+ S + + AL ++ + G + +
Sbjct: 317 EILSHIVYDRTDTQMLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTKDRRLKFA 372
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 373 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 432
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W K
Sbjct: 433 IANLFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKK 491
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 492 AASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 552 ACGLVKNLSLMCYVSV 567
>E5A1Z6_LEPMJ (tr|E5A1Z6) DNA-directed RNA polymerase OS=Leptosphaeria maculans
(strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8)
GN=LEMA_P091220.1 PE=3 SV=1
Length = 1360
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 247/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L YDP++ + +
Sbjct: 124 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYDPNEDENPIIKR 183
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKV 172
+ FG+V L RP G + ++ P ARL+ +TY+ M ++ + V H
Sbjct: 184 RYEITFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADISNRIMVAREHNA 241
Query: 173 R----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA 216
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 242 MVEGEDDDLDGGYTAGGATQIRWERED---MPGEEEAAARVFIGKLPVMLRSELCHLRNQ 298
Query: 217 EKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 299 SDADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRS 355
Query: 264 -LNKRNRLILKLVGNSKFEEINNGEKV------LSVYFLGVEVPVWILFFSLGVSSDKEI 316
+ K RLI + G++V ++ ++ E+P+ I+F +LG+ SD+EI
Sbjct: 356 AVEKGTRLISSFTIKWAENSLAGGKRVPGPFAYATLPYVKSEIPMAIVFRALGIVSDEEI 415
Query: 317 IDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSES----M 372
+ I Y DTQ+ + SI E+ S + ++AL ++ +G Q +
Sbjct: 416 LSHIVYDRTDTQMLELLKPSI----EEGSVVQDRESALDFIAR--RGAQQATKDRRLKFA 469
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 470 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 529
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W K
Sbjct: 530 IANLFRILFLKLTKDVFKYLQRCVESNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKK 588
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 589 AASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 648
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 649 ACGLVKNLSLMCYVSV 664
>Q1HDK1_9PLEO (tr|Q1HDK1) DNA-directed RNA polymerase OS=Phaeosphaeria avenaria
f. sp. tritici GN=RPB2 PE=3 SV=1
Length = 1262
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 169/571 (29%), Positives = 249/571 (43%), Gaps = 75/571 (13%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSK 106
G ++ C FFD GLVS Q++SY++F +Q G L YDP +
Sbjct: 17 GGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDE 76
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM-------- 158
D + +KFG+V L RP G + + P ARL+ +TY+ M
Sbjct: 77 DSDPIIKRRYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRI 134
Query: 159 KVTVEVQVFT---------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLP 203
V E QV P +++ ++ +D G+LP
Sbjct: 135 MVAKETQVVAEGEDEDMEVTNTVGGPTQIKWEREDVPMDD---------EAARVFIGKLP 185
Query: 204 VMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLW 250
VM+ S+LC ++ +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 186 VMLRSELCHLRNQTDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK-- 243
Query: 251 VSNTPDWAIGYKS-LNKRNRLI----LKLVGNSKFEEINNGEKVLSVY------FLGVEV 299
W +S + K RLI +K NS G++ + ++ EV
Sbjct: 244 -QGPIPWTAEIRSAVEKGTRLISSFNIKWADNS-LANPGQGKRAPGPFAYAMLPYIKTEV 301
Query: 300 PVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEE 359
P+ I+F +LG+ SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ +
Sbjct: 302 PMAIVFRALGIVSDEEILSHIVYDRTDTQMLELLKPSI----EEGAVVQDRETALDFIAK 357
Query: 360 H--VKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDN 413
+G + + + + P S RKA F YM+ LL GRR D+
Sbjct: 358 RGANQGTRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDD 417
Query: 414 RDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNG 473
RD F KR ++ F K + K LQR + D ++ + ASIITNG
Sbjct: 418 RDHFGKKRLDLAGPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNG 476
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ + +TG W K +GV L R T++ LRRT V GK+ R H
Sbjct: 477 LKYSLATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHN 536
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVST 564
SHWG VC TP+G+ CGLVKNLS+ VS
Sbjct: 537 SHWGLVCPAETPEGQACGLVKNLSLMCYVSV 567
>I6UEV5_ENCHA (tr|I6UEV5) DNA-directed RNA polymerase OS=Encephalitozoon hellem
(strain ATCC 50504) GN=EHEL_100240 PE=3 SV=1
Length = 1141
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 254/543 (46%), Gaps = 58/543 (10%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF++ GLV Q++S++QF+ +Q D + V + E K TV+FG++
Sbjct: 17 FFEQKGLVRQQLDSFDQFVKTKMQEVIDESPAIIV----QSAPTAGTETQKRITVRFGQI 72
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P + ++ + + P AR + +TYA+ + + V + + V DK K +
Sbjct: 73 YVSKPPIYT-ESDGRTITVFPNEARTRDLTYASPLFIDVIKETVSELGV-VDKHKYSRVP 130
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
+ G LPVM+ S C + + G+C +D GGYF++ G+EK
Sbjct: 131 F---------------GSLPVMLRSSYCVLHGLGDKDLIDLGECPYDQGGYFIVNGSEKV 175
Query: 238 FVAQEQLFLKKLWVSNTPDWA----------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
VAQE++ ++V A + KS + L +KL + +
Sbjct: 176 IVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPVAIRV---- 231
Query: 288 KVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGF 347
S+ + +VP+++L+ +LG SDKEIID I Y ++D F ++++ E+
Sbjct: 232 ---SLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDDE-----MFELLKESIEEGMVV 283
Query: 348 RKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFP--GSSGL--NRKARFLAYMVKS 400
+ AL Y+ + + P + + ++ L + P G+ +KA F+ Y+V+
Sbjct: 284 QDQNVALDYIGKRTAPVGTPQEKRIMMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQR 343
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + KR + F ++ +Q+ + R+
Sbjct: 344 LLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFN- 402
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
I L ASIIT G + A +TG W K ++ +GV L R N + T++ LRR ++
Sbjct: 403 IALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIE 462
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGM 579
GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S S + L +CG+
Sbjct: 463 KEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGV 522
Query: 580 EEL 582
E L
Sbjct: 523 ESL 525
>R0J2Z8_SETTU (tr|R0J2Z8) Uncharacterized protein OS=Setosphaeria turcica Et28A
GN=SETTUDRAFT_113050 PE=4 SV=1
Length = 1262
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 249/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYNPDDDDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + ++ P ARL+ +TY+ M +E ++ + R
Sbjct: 87 RYEIKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRIMVAREGRD 144
Query: 174 ----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 145 PEGDEDEDMEGGYTGGASQIRWERED---MPMDDGAAARVFIGKLPVMLRSELCHLRAQS 201
Query: 218 KGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS- 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 202 DADLFSLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSA 258
Query: 264 LNKRNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDK 314
+ K RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+
Sbjct: 259 VEKGTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDE 316
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESM 372
EI+ I Y DTQ+ + SI E+ S + + AL ++ + G + +
Sbjct: 317 EILSHIVYDRTDTQMLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTKDRRLKFA 372
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 373 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 432
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W K
Sbjct: 433 IANLFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKK 491
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 492 AASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 552 ACGLVKNLSLMCYVSV 567
>Q2VA54_PHAND (tr|Q2VA54) DNA-directed RNA polymerase OS=Phaeosphaeria nodorum
GN=RPB2 PE=3 SV=1
Length = 1262
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 166/566 (29%), Positives = 247/566 (43%), Gaps = 65/566 (11%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSK 106
G ++ C FFD GLVS Q++SY++F +Q G L YDP +
Sbjct: 17 GGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDE 76
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
D + +KFG+V L RP G + + P ARL+ +TY+ M + ++
Sbjct: 77 DSDPIIKRRYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRI 134
Query: 167 FTPHKVR------------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMS 208
+ + + K +ED G+LPVM+ S
Sbjct: 135 MVAKETQVVVEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRS 190
Query: 209 DLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+LC ++ +C +D GGYF+I G+EK +AQE Q+F KK N P
Sbjct: 191 ELCHLRNQSDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKKQ--GNVP 248
Query: 256 DWAIGYKSLNKRNRLILKLVGNSKFEEINNGE-----------KVLSVYFLGVEVPVWIL 304
A ++ K RLI N K+ + + G + ++ EVP+ I+
Sbjct: 249 WTAEIRSAVEKGTRLISSF--NIKWADTSLGNPGQGKRAPGPFAYAMLPYIKQEVPMAIV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VK 362
F +LG+ SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ + +
Sbjct: 307 FRALGIVSDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGANQ 362
Query: 363 GIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFR 418
G + + + + P S RKA F YM+ LL GRR D+RD F
Sbjct: 363 GTRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFG 422
Query: 419 NKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAF 478
KR ++ F K + K LQR + D ++ + ASIITNGL+ +
Sbjct: 423 KKRLDLAGPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYSL 481
Query: 479 STGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGK 538
+TG W K +GV L R T++ LRRT V GK+ R H SHWG
Sbjct: 482 ATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGL 541
Query: 539 VCFLSTPDGENCGLVKNLSVTGLVST 564
VC TP+G+ CGLVKNLS+ VS
Sbjct: 542 VCPAETPEGQACGLVKNLSLMCYVSV 567
>Q1HDI5_9PLEO (tr|Q1HDI5) DNA-directed RNA polymerase OS=Phaeosphaeria avenaria
f. sp. avenaria GN=RPB2 PE=3 SV=1
Length = 1262
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 248/567 (43%), Gaps = 67/567 (11%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSK 106
G ++ C FFD GLVS Q++SY++F +Q G L YDP +
Sbjct: 17 GGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDE 76
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
D + +KFG+V L RP G + + P ARL+ +TY+ M + ++
Sbjct: 77 DSDPIIKRRYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRI 134
Query: 167 FTPHKVR------------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMS 208
+ + + K +ED G+LPVM+ S
Sbjct: 135 MVAKETQVVAEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRS 190
Query: 209 DLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+LC ++ +C +D GGYF+I G+EK +AQE Q+F KK +
Sbjct: 191 ELCHLRNQSDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGSV 247
Query: 256 DWAIGYKS-LNKRNRLILKLVGNSKFEEIN-----NGEKVLSVY------FLGVEVPVWI 303
W +S + K RLI N K+ E + G + + ++ EVP+ I
Sbjct: 248 PWTAEIRSAVEKGTRLISSF--NIKWSENSLGGPGQGRRAPGPFAYAMLPYIKTEVPMAI 305
Query: 304 LFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--V 361
+F +LG+ SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ +
Sbjct: 306 VFRALGIVSDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGAN 361
Query: 362 KGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+G + + + + P S RKA F YM+ LL GRR D+RD F
Sbjct: 362 QGTRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHF 421
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRA 477
KR ++ F K + K LQR + D ++ + ASIITNGL+ +
Sbjct: 422 GKKRLDLAGPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYS 480
Query: 478 FSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWG 537
+TG W K +GV L R T++ LRRT V GK+ R H SHWG
Sbjct: 481 LATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWG 540
Query: 538 KVCFLSTPDGENCGLVKNLSVTGLVST 564
VC TP+G+ CGLVKNLS+ VS
Sbjct: 541 LVCPAETPEGQACGLVKNLSLMCYVSV 567
>Q1HDI7_9PLEO (tr|Q1HDI7) DNA-directed RNA polymerase OS=Phaeosphaeria avenaria
f. sp. avenaria GN=RPB2 PE=3 SV=1
Length = 1262
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 248/567 (43%), Gaps = 67/567 (11%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSK 106
G ++ C FFD GLVS Q++SY++F +Q G L YDP +
Sbjct: 17 GGEITSEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDE 76
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
D + +KFG+V L RP G + + P ARL+ +TY+ M + ++
Sbjct: 77 DSDPIIKRRYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRI 134
Query: 167 FTPHKVR------------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMS 208
+ + + K +ED G+LPVM+ S
Sbjct: 135 MVAKETQVVAEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRS 190
Query: 209 DLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+LC ++ +C +D GGYF+I G+EK +AQE Q+F KK +
Sbjct: 191 ELCHLRNQSDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGSV 247
Query: 256 DWAIGYKS-LNKRNRLILKLVGNSKFEEIN-----NGEKVLSVY------FLGVEVPVWI 303
W +S + K RLI N K+ E + G + + ++ EVP+ I
Sbjct: 248 PWTAEIRSAVEKGTRLISSF--NIKWSENSLGGPGQGRRAPGPFAYAMLPYIKTEVPMAI 305
Query: 304 LFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--V 361
+F +LG+ SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ +
Sbjct: 306 VFRALGIVSDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGAN 361
Query: 362 KGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+G + + + + P S RKA F YM+ LL GRR D+RD F
Sbjct: 362 QGTRDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHF 421
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRA 477
KR ++ F K + K LQR + D ++ + ASIITNGL+ +
Sbjct: 422 GKKRLDLAGPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYS 480
Query: 478 FSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWG 537
+TG W K +GV L R T++ LRRT V GK+ R H SHWG
Sbjct: 481 LATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWG 540
Query: 538 KVCFLSTPDGENCGLVKNLSVTGLVST 564
VC TP+G+ CGLVKNLS+ VS
Sbjct: 541 LVCPAETPEGQACGLVKNLSLMCYVSV 567
>B6QUV1_PENMQ (tr|B6QUV1) DNA-directed RNA polymerase OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_010370 PE=3 SV=1
Length = 1254
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 263/565 (46%), Gaps = 44/565 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KGDNEHFKY 115
C +FD GLVS Q++S+++FI++ +Q + G + + + P++ + D +
Sbjct: 25 CWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTIDQTITPNEDEIDPVVIRR 84
Query: 116 ATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRS- 174
+K+G + L RP F N +LP AR + +TYA+ + + V+ ++ + ++
Sbjct: 85 YEIKYGTIMLARPSF--SEINGAATLLLPMEARHRNLTYASPLYLNVQRRLTEGRERKAV 142
Query: 175 DKFKTGKEDYXXX-------------XXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK--- 218
D+ G E+ GR+P+M+ S C +++ +
Sbjct: 143 DREGEGDENEEQKPGGTYLDWEEKPLVVSEEEAKGCYIGRIPIMLKSKYCLLRDLSEQSL 202
Query: 219 ---GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRN 268
+C +D GGYF+I G+EK +AQE Q+F KK S TP A ++ K +
Sbjct: 203 YNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYIAEIRSAVEKGS 261
Query: 269 RLI----LKLVGNSKFEEINNGEKVLS-VYFLGVEVPVWILFFSLGVSSDKEIIDLIDYG 323
R++ LKL + G + S + ++ ++P+ I+F +LGV SD++I++ I Y
Sbjct: 262 RILSQLSLKLFAKGDSSKGGFGPTIRSSLPYIKTDIPIVIVFRALGVVSDEDILNHICYD 321
Query: 324 NEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNL 378
DT + + I + E F + + H + ++Y E M++
Sbjct: 322 RNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSQTSMSHDRRVRYA-REIMQKEFLP 380
Query: 379 YLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFA 438
++ RKA FL YMV LL GRR D+RD F KR + F
Sbjct: 381 HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTLFT 440
Query: 439 HARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVA 498
+ +++ +QR + +R+V + L + +T GL+ A +TG W K + +GV
Sbjct: 441 RVTRDLTRYVQRCVETNREVV-LNVGLKPATLTGGLKYALATGNWGEQKKAMSSKAGVSQ 499
Query: 499 NLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSV 558
L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNL++
Sbjct: 500 VLSRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLAL 559
Query: 559 TGLVST-NISESIFPQLLDCGMEEL 582
++ + SE I ++ ME L
Sbjct: 560 MCSITVGSPSEPIVDFMIQRNMEVL 584
>Q1HDJ8_PHAND (tr|Q1HDJ8) DNA-directed RNA polymerase OS=Phaeosphaeria nodorum
GN=RPB2 PE=3 SV=1
Length = 1262
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 246/559 (44%), Gaps = 67/559 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L YDP + D +
Sbjct: 25 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDEDSDPIIKR 84
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + + P ARL+ +TY+ M + ++ + +
Sbjct: 85 RYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRIMVAKETQV 142
Query: 174 -----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA 216
+ K +ED G+LPVM+ S+LC ++
Sbjct: 143 VVEGEDEDMEVTTTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRSELCHLRNQ 198
Query: 217 EK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS 263
+C +D GGYF+I G+EK +AQE Q+F KK + W +S
Sbjct: 199 SDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGSVPWTAEIRS 255
Query: 264 -LNKRNRLILKLVGNSKFEEIN-----NGEKVLSVY------FLGVEVPVWILFFSLGVS 311
+ K RLI N K+ E + G++ + ++ EVP+ I+F +LG+
Sbjct: 256 AVEKGTRLISSF--NIKWSENSLGGSGQGKRAPGPFAYAMLPYIKTEVPMAIVFRALGIV 313
Query: 312 SDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPS 369
SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ + +G +
Sbjct: 314 SDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGANQGTRDRRL 369
Query: 370 ESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXX 425
+ + + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 370 KFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLA 429
Query: 426 XXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTH 485
++ F K + K LQR + D ++ + ASIITNGL+ + +TG W
Sbjct: 430 GPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGD 488
Query: 486 PYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTP 545
K +GV L R T++ LRRT V GK+ R H SHWG VC TP
Sbjct: 489 QKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETP 548
Query: 546 DGENCGLVKNLSVTGLVST 564
+G+ CGLVKNLS+ VS
Sbjct: 549 EGQACGLVKNLSLMCYVSV 567
>Q1HDK2_9PLEO (tr|Q1HDK2) DNA-directed RNA polymerase OS=Phaeosphaeria avenaria
f. sp. tritici GN=RPB2 PE=3 SV=1
Length = 1262
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 246/559 (44%), Gaps = 67/559 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L YDP + D +
Sbjct: 25 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGTVILEQNTPYDPDEDSDPIIKR 84
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + + P ARL+ +TY+ M + ++ + +
Sbjct: 85 RYEIKFGRVYLARPTHTEG--DGTTVALFPHEARLRNLTYSGAMLADISNRIMVAKETQV 142
Query: 174 -----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA 216
+ K +ED G+LPVM+ S+LC ++
Sbjct: 143 VAEGEDEDMEVTNTVGGPTQIKWEREDVPMDEESARVFI----GKLPVMLRSELCHLRNQ 198
Query: 217 EK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS 263
+C +D GGYF+I G+EK +AQE Q+F KK + W +S
Sbjct: 199 SDEALFAFNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGSVPWTAEIRS 255
Query: 264 -LNKRNRLILKLVGNSKFEEIN-----NGEKVLSVY------FLGVEVPVWILFFSLGVS 311
+ K RLI N K+ E + G++ + ++ EVP+ I+F +LG+
Sbjct: 256 AVEKGTRLISSF--NIKWSENSLGGSGQGKRAPGPFAYAMLPYIKTEVPMAIVFRALGIV 313
Query: 312 SDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPS 369
SD+EI+ I Y DTQ+ + SI E+ + + + AL ++ + +G +
Sbjct: 314 SDEEILSHIVYDRTDTQMLELLKPSI----EEGAVIQDRETALDFIAKRGANQGTRDRRL 369
Query: 370 ESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXX 425
+ + + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 370 KFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLA 429
Query: 426 XXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTH 485
++ F K + K LQR + D ++ + ASIITNGL+ + +TG W
Sbjct: 430 GPLVANLFRILFLKLTKDVFKYLQRCVESSTDFN-VQMAVKASIITNGLKYSLATGNWGD 488
Query: 486 PYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTP 545
K +GV L R T++ LRRT V GK+ R H SHWG VC TP
Sbjct: 489 QKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETP 548
Query: 546 DGENCGLVKNLSVTGLVST 564
+G+ CGLVKNLS+ VS
Sbjct: 549 EGQACGLVKNLSLMCYVSV 567
>M1KMC5_ENCCN (tr|M1KMC5) DNA-directed RNA polymerase OS=Encephalitozoon cuniculi
GN=ECU10_0250 PE=3 SV=1
Length = 1141
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 264/551 (47%), Gaps = 58/551 (10%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF++ GLV Q++S++QF+ +Q + + V + P+ + + K V+FG++
Sbjct: 17 FFEQKGLVRQQLDSFDQFVKTKMQEVINESPVIIVQSA--PTAGIETQ--KRIAVRFGQI 72
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P + ++ + + P AR++ +TYA+ + + V + + V DK K +
Sbjct: 73 YVSKPPVYT-ESDGRTITVFPNEARIRDLTYASPLFIDVTKETLSELGV-VDKHKYSRVP 130
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWM------KEAEKGDCDFDHGGYFLIKGAEKA 237
+ G LPVM+ S C + + G+C +D GGYF++ G+EK
Sbjct: 131 F---------------GSLPVMLRSSYCVLYGLGDKDLIDLGECPYDQGGYFIVNGSEKV 175
Query: 238 FVAQEQLFLKKLWVSNTPDWA----------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
VAQE++ ++V A + KS + L +KL + G
Sbjct: 176 IVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSP-------GV 228
Query: 288 KVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGF 347
+S+ + +VP+++L+ +LG SDKEIID I Y +++ F ++++ E+ +
Sbjct: 229 IRVSLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDEE-----MFELLKESIEEGTVV 283
Query: 348 RKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFP--GSSGL--NRKARFLAYMVKS 400
+ AL Y+ + I P + + ++ L + P G+ +KA F+ Y+V+
Sbjct: 284 QDQNVALDYIGKRSAPIGTPQEKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQR 343
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + KR + F ++ +Q+ + R+
Sbjct: 344 LLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGREFN- 402
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
I L ASIIT G + A +TG W K ++ +GV L R N + T++ LRR ++
Sbjct: 403 IALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIE 462
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGM 579
GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S S + L +CG+
Sbjct: 463 KEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGV 522
Query: 580 EELVDDTTTFL 590
E L + +T+ L
Sbjct: 523 ESLEEISTSQL 533
>B6HM08_PENCW (tr|B6HM08) DNA-directed RNA polymerase OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=Pc21g12680 PE=3 SV=1
Length = 1255
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 262/576 (45%), Gaps = 45/576 (7%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FFD GLVS Q++S+++FI++ +Q + G + + + PS+
Sbjct: 15 EADEGITSEDCWTVISSFFDSKGLVSQQLDSFDEFISSTMQELVEEQGQVVLDQTLPPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ + + +KFG V L RP G + MLP+ ARL+ +TYA+ + + V +
Sbjct: 75 DEIEPIVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLGVTKK 132
Query: 166 VFTPH----KVRSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVMVMSDL 210
+ K D G+ D G++P+M+ S
Sbjct: 133 IMEGREKIGKPTDDDDNEGESDPKTQGTYLEWETKQLPQEQMKEETVFIGKMPIMLKSKY 192
Query: 211 CWMKEAEKG------DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 193 CILKDLNESSLYAWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYI 251
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ LKL + G + S ++ ++P+ ++F +LGV S
Sbjct: 252 AEIRSAVEKGSRMLSSLTLKLFAKGDSAKGGFGPTIRSTLPYVKADIPIVVVFRALGVVS 311
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H + ++Y
Sbjct: 312 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSNLNHDRRVRYA 371
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+ M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 -RDIMQKELLPHISQNEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 430
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPY 487
+ F K + + +QR + +R++ + + AS +T GL+ A +TG W
Sbjct: 431 LLASLFRTLFTRVTKDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGNWGEQK 489
Query: 488 KRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 547
K +GV L R +++ LRRT + GK+ R H +HWG VC TP+G
Sbjct: 490 KAASAKAGVSQVLSRYTFASSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEG 549
Query: 548 ENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+ CGLVKNL++ ++ +E I ++ ME L
Sbjct: 550 QACGLVKNLALMCYITVGTPAEPIVDFMIQRNMEVL 585
>Q6QN96_COCHE (tr|Q6QN96) DNA-directed RNA polymerase OS=Cochliobolus
heterostrophus PE=3 SV=1
Length = 1208
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 249/556 (44%), Gaps = 63/556 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P + + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNTPYNPDEDDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR- 173
+KFG+V L RP G + ++ P ARL+ +TY+ M +E ++ + R
Sbjct: 87 RYEIKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRIMVAREGRD 144
Query: 174 ----------------SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE 217
+ + + +ED G+LPVM+ S+LC ++
Sbjct: 145 PEGDEDEDMEGGYTGGASQIRWERED---MPMDDGTAARVFIGKLPVMLRSELCHLRAQS 201
Query: 218 KGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS- 263
D C +D GGYF+I G+EK +AQE Q+F KK W +S
Sbjct: 202 DADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSA 258
Query: 264 LNKRNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDK 314
+ K RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+
Sbjct: 259 VEKGTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDE 316
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESM 372
EI+ I Y DTQ+ + SI E+ S + + AL ++ + G + +
Sbjct: 317 EILSHIVYDRTDTQMLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTKDRRLKFA 372
Query: 373 EECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+ + P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 373 RDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPL 432
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
++ F K + K LQR + ++D ++ + ASIITNGL+ + +TG W
Sbjct: 433 IANLFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASIITNGLKYSLATGNWGDQKX 491
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+
Sbjct: 492 AASAXAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQ 551
Query: 549 NCGLVKNLSVTGLVST 564
CGLVKNLS+ VS
Sbjct: 552 ACGLVKNLSLMCYVSV 567
>H0H179_9SACH (tr|H0H179) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
x Saccharomyces kudriavzevii VIN7 GN=VIN7_9991 PE=3 SV=1
Length = 1224
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAVDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLMAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>E3RQK0_PYRTT (tr|E3RQK0) DNA-directed RNA polymerase OS=Pyrenophora teres f.
teres (strain 0-1) GN=PTT_11005 PE=3 SV=1
Length = 1262
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 247/553 (44%), Gaps = 57/553 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P ++ + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNQPYNPDEEDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRS 174
+KFG+V L RP G + ++ P ARL+ +TY+ M +E +V + R
Sbjct: 87 RYEMKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRVMVAREGRD 144
Query: 175 DKFKTGKE--------------DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD 220
+ +E + G+LPVM+ S+LC ++ D
Sbjct: 145 PEADDDEEMEGGYTGGQNQIRWERENMSSDDGAAARVFIGKLPVMLRSELCHLRAQSDAD 204
Query: 221 ------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS-LNK 266
C +D GGYF+I G+EK +AQE Q+F KK W +S + K
Sbjct: 205 LFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSAVEK 261
Query: 267 RNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDKEII 317
RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+EI+
Sbjct: 262 GTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDEEIL 319
Query: 318 DLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESMEEC 375
I + DTQ + SI E+ S + + AL ++ + G + + +
Sbjct: 320 SHIVFDRNDTQTLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTRDRRLKFARDI 375
Query: 376 LNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
+ P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 376 MQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIAN 435
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
++ F K + K LQR + ++D ++ + AS ITNGL+ + +TG W K
Sbjct: 436 LFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASTITNGLKYSLATGNWGDQKKAAS 494
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+ CG
Sbjct: 495 AKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQACG 554
Query: 552 LVKNLSVTGLVST 564
LVKNLS+ VS
Sbjct: 555 LVKNLSLMCYVSV 567
>Q7RQI2_PLAYO (tr|Q7RQI2) DNA-directed RNA polymerase OS=Plasmodium yoelii yoelii
GN=PY01115 PE=3 SV=1
Length = 1312
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 252/556 (45%), Gaps = 61/556 (10%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV--TPSYDPSKKGDNEHFKYATVKFG 121
FF HGLV+ QI SYN FI +Q D ++ + P Y P K +N + Y+ +KFG
Sbjct: 45 FFGSHGLVNQQIESYNDFIEYRMQEIIDEHPNIEIKPQPQYRPDKD-ENNNIIYS-LKFG 102
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF-----TPHKVRSDK 176
+++LDRP F N + P+ ARL+ +TY++ + + +E + T ++ +K
Sbjct: 103 QLSLDRPFF--DEKNLINKNLWPQEARLRNLTYSSAIYIDIEQSTYIVDENTKKQILKEK 160
Query: 177 FKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFL 230
F GR+P+M+ S CW K ++ G+C D GGYF+
Sbjct: 161 F---------------VYERINLGRIPLMLKSMFCWTKGLPDNDISDMGECSLDQGGYFI 205
Query: 231 IKGAEKAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINN 285
+ G EK VAQE++ ++V S+ W +S ++++ K + +
Sbjct: 206 VNGGEKVLVAQERMANNFIYVFKKKHSSKFGWIAEIRSQMEKSQATSAFSVKMKTKSGSR 265
Query: 286 GEK----------VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
G V ++ ++ E+ V ILF +LG +SD++I+ I Y D + NI
Sbjct: 266 GSGGSGKSSGGLLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDLNDKMMINI--- 322
Query: 336 SIRDADEKCSGFRKGKNALHYM--------EEHVKGIQYPPSESMEECLNLYLFPGSSGL 387
+++ E+C + L Y+ K I Y +E L ++ G
Sbjct: 323 -LKETLEECIDYPTQDICLDYIGKRGPTVGASRDKRILYAKELLRKEVLP-HMGTGPGVE 380
Query: 388 NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKA 447
+RK+ F+ YM+ LLLA GR K D+RD F KR +F K + +
Sbjct: 381 SRKSYFIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFATYFRKMAKDVKRV 440
Query: 448 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 507
LQR ++ ++ S IT G+Q +TG W +GV L R
Sbjct: 441 LQRQIDNNKPFDVAGAIRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSS 500
Query: 508 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS 567
++ LRR + GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S
Sbjct: 501 CLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTS 560
Query: 568 -ESIFPQLLDCGMEEL 582
+I+ L + G+E L
Sbjct: 561 TNNIYEFLTEWGLESL 576
>G4TVM8_PIRID (tr|G4TVM8) DNA-directed RNA polymerase OS=Piriformospora indica
(strain DSM 11827) GN=PIIN_09355 PE=3 SV=1
Length = 1223
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 258/555 (46%), Gaps = 36/555 (6%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF++ GLV Q++S+N+FI +Q + GDLN+ ++ + +
Sbjct: 34 CWTVIAAFFEKRGLVRQQLDSFNEFINNTIQDIVEDSGDLNLE-QHEQHTGAETDKSTRH 92
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+KFG+V L RP + Q + P+ ARL+ +TY+A + VE+ +V +D+
Sbjct: 93 KIKFGQVYLTRPSV--TEKDGQVSPLFPQEARLRNLTYSATL--MVEIVEEKQEQVPNDE 148
Query: 177 FKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM---KEAEKGD---CDFDHGGYFL 230
G D+ ++P+M+ SD+C + + EK D C D GGYF+
Sbjct: 149 ---GGWDWERIPGSIPGFNRLPLAKIPIMLRSDICALYTIPDPEKYDLNECPDDPGGYFI 205
Query: 231 IKGAEKAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNKRNRLILKLVGNSKF----E 281
I G EK +AQE++ ++V + + +S+ +R +L F E
Sbjct: 206 ISGQEKVLIAQERMAGNHVYVFAKGQPSPISFLAEIRSVPERGGKLLSSFQVKLFHKGIE 265
Query: 282 EINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA- 340
+ + G SV ++ +VP+WILF ++GV +D++I++ I Y D Q+ + I +
Sbjct: 266 KQSGGAIRASVPYIKTDVPIWILFRAMGVLADRDILEHICYDGHDDQMLEMLKPCIDEGF 325
Query: 341 ----DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFL 394
E F R+G E ++ Q E +++ L ++ RKA F+
Sbjct: 326 VVQHREIALDFIGRRGNTPTISRERRIRYAQ----EIIQKELLPHISMEEGNEARKAYFV 381
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YM+ LLLA RR+ D+RD F KR ++ F K + + LQ+ +
Sbjct: 382 GYMIHRLLLAALDRREIDDRDHFGKKRLDLAGPLLSTLFRMLFRKVVKDVYRYLQKCVES 441
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
+ + + I+NGL+ + +TG W + +GV L R T++ LRR
Sbjct: 442 GKAFD-VGRAIKLGTISNGLKYSLATGNWGDQQNAMSSKAGVSQVLNRYTYASTLSHLRR 500
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
T + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S + +
Sbjct: 501 TNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMACISVGSYSAPVGEF 560
Query: 575 LD-CGMEELVDDTTT 588
LD GME L ++ +
Sbjct: 561 LDEWGMEALEENAQS 575
>N1P384_YEASX (tr|N1P384) Rpb2p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_2167 PE=4 SV=1
Length = 1224
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAIDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>G2WN23_YEASK (tr|G2WN23) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPB2 PE=3 SV=1
Length = 1224
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAIDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>C8ZGQ9_YEAS8 (tr|C8ZGQ9) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1O4_3653g PE=3 SV=1
Length = 1224
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAIDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>C7GN73_YEAS2 (tr|C7GN73) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPB2 PE=3 SV=1
Length = 1224
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAIDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>A6ZNZ5_YEAS7 (tr|A6ZNZ5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPB2 PE=3 SV=1
Length = 1224
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAIDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>G0W7M5_NAUDC (tr|G0W7M5) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0C01250 PE=3 SV=1
Length = 1227
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 38 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 96
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 97 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAVDVPGRELKY--EL 152
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 153 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSEKV 212
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ V
Sbjct: 213 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTVK 271
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 272 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 331
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 332 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 383
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 384 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRYMQRTVEEANDF 443
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 444 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 502
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 503 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 562
Query: 578 GMEELVD 584
GME L D
Sbjct: 563 GMEPLED 569
>J8LI22_SACAR (tr|J8LI22) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_3281 PE=3
SV=1
Length = 1224
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAVDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ EA + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>M2WUB3_GALSU (tr|M2WUB3) DNA-directed RNA polymerase OS=Galdieria sulphuraria
GN=Gasu_49590 PE=3 SV=1
Length = 1184
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 252/543 (46%), Gaps = 46/543 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT--PSYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++F+ +Q D+ DL +T P Y P ++ ++ +Y V FG
Sbjct: 18 YFEEKGLVRQQLDSFDEFVTNTMQEIVDSQPDLVLTAEPQYLPGQRSEDLDKRYV-VSFG 76
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
+++L +P F + + P ARL+ +TY++ + V V ++GK
Sbjct: 77 QLSLSKPTFTEDTGETR--PLYPNQARLRNLTYSSALYCDVTVTEV--------NLESGK 126
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
E+ GR+P+M+ S C + AE G+C +D GGYF+I G+E
Sbjct: 127 EE-----TSQHPPIRVFLGRIPIMLKSQFCHLYNLEPWDLAELGECPYDQGGYFVINGSE 181
Query: 236 KAFVAQEQLFLKKLWV---------SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNG 286
K +AQE++ ++V S + S N+ L+ + + I+
Sbjct: 182 KVIIAQERMTSNHVFVFKRSQPSKYSYVAECRSAPDSGNRPPSLLQVKLLRGGAKGISGQ 241
Query: 287 EKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DE 342
+S+ ++ ++PV I+F +LG +D+EI+ I Y +D ++ SI +A D
Sbjct: 242 YIRVSMPYIKQDIPVIIVFRALGFENDREIMSHICYNFQDEELMTFLMPSIEEAAVIQDH 301
Query: 343 KCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLL 402
+ GK K IQY E +++ ++ G +K FL Y++ LL
Sbjct: 302 LVALDYIGKRGNTIAVTKDKRIQYA-REVLQKEFLPHIGIGEGCELKKGYFLGYVINRLL 360
Query: 403 LAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIE 462
GRR+ D+RD + NKR + H K LQR+L+ + + ++
Sbjct: 361 STALGRREVDDRDHYGNKRLDLAGPLLGEMFRHHLRRVLKETRSILQRNLDTGKGLN-LQ 419
Query: 463 HYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYT 522
+ + ITNGL+ A +TG W + +GV L R T++ LRR +
Sbjct: 420 GAVKSRTITNGLKNALATGNW------IRGRTGVSQVLNRLTYASTLSHLRRLNSPIGRE 473
Query: 523 GKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEE 581
GK+ R H +HWG +C TP+G+ CGL KNL++ +S S + L + ME
Sbjct: 474 GKLAKPRQLHNTHWGMICPAETPEGQACGLTKNLALMAYISVGTPSAPVIEFLEEWSMEN 533
Query: 582 LVD 584
L++
Sbjct: 534 LLE 536
>B2W4R0_PYRTR (tr|B2W4R0) DNA-directed RNA polymerase OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_04610 PE=3
SV=1
Length = 1208
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 163/553 (29%), Positives = 246/553 (44%), Gaps = 57/553 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGD--LNVTPSYDPSKKGDNEHFK 114
C FFD GLVS Q++SY++F +Q G L Y+P ++ + +
Sbjct: 27 CWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVKENGSVILEQNQPYNPDEEDNPIIKR 86
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRS 174
+KFG+V L RP G + ++ P ARL+ +TY+ M +E +V + R
Sbjct: 87 RYEMKFGRVYLARPTHTEG--DGTTVQLYPHEARLRNLTYSGAMLADIENRVMVAREGRD 144
Query: 175 DKFKTGKE--------------DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD 220
+E + G+LPVM+ S+LC ++ D
Sbjct: 145 PDADDDEEMEGGYTGGQNQIRWERENMSSDDGAAARVFIGKLPVMLRSELCHLRAQSDAD 204
Query: 221 ------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKS-LNK 266
C +D GGYF+I G+EK +AQE Q+F KK W +S + K
Sbjct: 205 LFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQVFRKK---QGPIPWIAEIRSAVEK 261
Query: 267 RNRLILKLVGNSKFEE---INNGEKV------LSVYFLGVEVPVWILFFSLGVSSDKEII 317
RLI N K+ E G+++ ++ ++ +VP+ I+F +LG+ SD+EI+
Sbjct: 262 GTRLISSF--NIKWAENSLAGPGKRIPGPFAYATLPYIKADVPMAIVFRALGIVSDEEIL 319
Query: 318 DLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH--VKGIQYPPSESMEEC 375
I + DTQ + SI E+ S + + AL ++ + G + + +
Sbjct: 320 SHIVFDRNDTQTLELLKPSI----EEGSVVQDRETALDFIAKRGANSGTRDRRLKFARDI 375
Query: 376 LNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
+ P S RKA F YM+ LL GRR D+RD F KR
Sbjct: 376 MQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHFGKKRLDLAGPLIAN 435
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
++ F K + K LQR + ++D ++ + AS ITNGL+ + +TG W K
Sbjct: 436 LFRILFLKLTKDVYKYLQRCVENNQDFN-VQMAVKASTITNGLKYSLATGNWGDQKKAAS 494
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
+GV L R T++ LRRT V GK+ R H SHWG VC TP+G+ CG
Sbjct: 495 AKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQACG 554
Query: 552 LVKNLSVTGLVST 564
LVKNLS+ VS
Sbjct: 555 LVKNLSLMCYVSV 567
>B8MU25_TALSN (tr|B8MU25) DNA-directed RNA polymerase OS=Talaromyces stipitatus
(strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006)
GN=TSTA_006770 PE=3 SV=1
Length = 1256
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 262/567 (46%), Gaps = 46/567 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KGDNEHFKY 115
C +FD GLVS Q++S+++FI++ +Q + G + + + P++ + D +
Sbjct: 25 CWTVISSYFDTKGLVSQQLDSFDEFISSTMQELVEEQGQVTIDQTITPNEDEIDPVVIRR 84
Query: 116 ATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVR-S 174
+K+G + L RP F N +LP AR + +TYA+ + + V+ ++ + + +
Sbjct: 85 YEIKYGTIMLARPSF--SEINGAATLLLPMEARHRNLTYASPLYLNVQRRLTEGRERKVA 142
Query: 175 DKFKTGKEDYXXXXX---------------XXXXXXXXXXGRLPVMVMSDLCWMKEAEK- 218
D+ G D GR+P+M+ S C +++ +
Sbjct: 143 DRDGEGLGDENEEQKPGGTYLEWEEKPLVISEEEAKGCYIGRIPIMLKSKYCLLRDLSEQ 202
Query: 219 -----GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNK 266
+C +D GGYF+I G+EK +AQE Q+F KK S TP A ++ K
Sbjct: 203 SLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYVAEIRSAVEK 261
Query: 267 RNRLI----LKLVGNSKFEEINNGEKVLS-VYFLGVEVPVWILFFSLGVSSDKEIIDLID 321
+R++ LKL + G + S + ++ ++P+ I+F +LGV SD++I++ I
Sbjct: 262 GSRILSQLSLKLFAKGDSSKGGFGPTIRSSLPYIKTDIPIVIVFRALGVVSDEDILNHIC 321
Query: 322 YGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL 376
Y DT + + I + E F + + H + ++Y E M++
Sbjct: 322 YDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSQTSMSHDRRVRYA-REIMQKEF 380
Query: 377 NLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVH 436
++ RKA FL YMV LL GRR D+RD F KR +
Sbjct: 381 LPHISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLDLAGPLLATLFRTL 440
Query: 437 FAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGV 496
F + +++ +QR + +R+V + L + +T GL+ A +TG W K + +GV
Sbjct: 441 FTRVTRDLTRYVQRCVETNREVV-LNVGLKPATLTGGLKYALATGNWGEQKKAMSSKAGV 499
Query: 497 VANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNL 556
L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNL
Sbjct: 500 SQVLSRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNL 559
Query: 557 SVTGLVST-NISESIFPQLLDCGMEEL 582
++ ++ + SE I ++ ME L
Sbjct: 560 ALMCSITVGSPSEPIVDFMIQRNMEVL 586
>G8ZM49_TORDC (tr|G8ZM49) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0A03610 PE=3 SV=1
Length = 1222
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 35 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTEADNISRKYE-ISFGKI 93
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 94 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAVDVPGRELKY--EL 149
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 150 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSDATELDLYKLKECPFDMGGYFIINGSEKV 209
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 210 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIK 268
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 269 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 328
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY + L P + L +RKA FL YM+
Sbjct: 329 LDFIGRRG-TALGIKKE--KRIQY-----ARDILQKEFLPHITQLEGFESRKAFFLGYMI 380
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + +D
Sbjct: 381 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRYMQRTVEEAKDF 440
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 441 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 499
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 500 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 559
Query: 578 GMEELVD 584
GME L D
Sbjct: 560 GMEPLED 566
>H2AVJ8_KAZAF (tr|H2AVJ8) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0E02450 PE=3 SV=1
Length = 1222
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 250/547 (45%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 33 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTEADNISRKYE-ISFGKI 91
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V + + V K E
Sbjct: 92 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVRKRTYEAVDVPGRDLKY--EL 147
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 148 IAEESEDDSESGKVFIGRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSEKV 207
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 208 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGRESSSSRTIK 266
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 267 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 326
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 327 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 378
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 379 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKLTKDIFRYMQRTVEEANDF 438
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 439 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 497
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 498 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 557
Query: 578 GMEELVD 584
GME L D
Sbjct: 558 GMEPLED 564
>J7JG84_9LECA (tr|J7JG84) DNA-directed RNA polymerase OS=Peltigera membranacea
GN=rpbII PE=3 SV=1
Length = 1255
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 254/551 (46%), Gaps = 52/551 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD GLVS Q++S+++F++ +Q L + + PS D +
Sbjct: 25 CWTVISSFFDSKGLVSQQLDSFDEFVSTTMQELVAENAILTLDQNAPPSDSDDPVLIRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYA-------------AKMKVTVE 163
+KFG V L RP G + MLP+ ARL+ +TY+ A+ +V VE
Sbjct: 85 EIKFGTVLLSRPAMTEGDGSTS--AMLPQEARLRNLTYSSPLYLEMTKKVSVARERVAVE 142
Query: 164 VQVFTPHKVRSDKFKTGKE---DYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEAEK- 218
P+ + + G + D+ G+LP+M+ S C +K+ +
Sbjct: 143 NADEDPNPDSDTQKRFGADANLDWVIEDGEDDQDPSKVFVGKLPIMLKSKYCILKDLGET 202
Query: 219 -----GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNK 266
+C +D GGYF+I G+EK +AQE Q+F KK S TP A ++ K
Sbjct: 203 ELYNWNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAPPSATPYIAEIRSAVEK 261
Query: 267 RNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLID 321
+RLI +KL + + G+ V ++ ++ +VP+ I+F LG+ SD++I++ I
Sbjct: 262 GSRLISSMQIKLFAKGENHKGGFGQTVKATLPYVKTDVPIGIVFRGLGIVSDEDILNHIC 321
Query: 322 YGNEDTQ--------IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESME 373
Y DTQ I+ F R+ G R +L K ++Y + M+
Sbjct: 322 YDRNDTQMLEKLKPCIEEAFVIQDREVALDWIGSRGNSQSL----SRPKRVKYA-RDIMQ 376
Query: 374 ECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXX 433
+ L ++ +KA FL YMV +L GRR+ D+RD F KR
Sbjct: 377 KELLPHISQTDGSETKKAFFLGYMVHRMLQCALGRREVDDRDHFGKKRLDLAGPLLAGLF 436
Query: 434 KVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERT 493
++ F K + K LQ+ + +R+ + + ++ +TNGL+ + +TG W K
Sbjct: 437 RMLFNKLTKDVFKYLQKCVENNREFN-LTLGVKSTTLTNGLKYSLATGNWGDQKKAASSK 495
Query: 494 SGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLV 553
+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLV
Sbjct: 496 AGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLV 555
Query: 554 KNLSVTGLVST 564
KNL++ ++
Sbjct: 556 KNLALMCYITV 566
>A5DVP4_LODEL (tr|A5DVP4) DNA-directed RNA polymerase OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=LELG_01430 PE=3 SV=1
Length = 1238
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 262/569 (46%), Gaps = 50/569 (8%)
Query: 49 GEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAF--DAFGDLNVTPSYDPSK 106
+++ C FF E GLVS Q++S+++FI + +Q D+ L+ + K
Sbjct: 19 AQNITPEDCWTVISSFFQEKGLVSQQLDSFDEFIESTIQELVWEDSHLILDQPAQHTSEK 78
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
DN+ ++ + FGK+ + +P G M P+ ARL+ +TY++ + V + +V
Sbjct: 79 DHDNKRYE---INFGKIYISKPTQTEGDGTTH--PMFPQEARLRNLTYSSPIYVDMTKRV 133
Query: 167 FTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGD 220
FT + + E + G++P+M+ S C +++ E +
Sbjct: 134 FTSDD--NKRIDNELEWHEIDVEGEKKTSKVYLGKVPIMLRSKFCMLRDLGEHEFYELKE 191
Query: 221 CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI-- 271
C +D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 192 CPYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISS 250
Query: 272 --LKLVGNSKFEEINNGEKVL--SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDT 327
+KL G +E + + ++ ++ ++P+ I+F +LG+ D +I++ I Y D
Sbjct: 251 MQIKLYGR---DEKGTSARTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHICYDQNDW 307
Query: 328 QIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFP 382
Q+ + + + E F + L E K IQY ++ L L P
Sbjct: 308 QMLEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLP 360
Query: 383 GSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFA 438
+ RKA FL YMV LLL R++ D+RD F KR ++ F
Sbjct: 361 NITQEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFK 420
Query: 439 HARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVA 498
K + +QR + D++ + + + IT+GL+ + +TG W K + +GV
Sbjct: 421 KLTKDIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQ 479
Query: 499 NLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSV 558
L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 480 VLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSL 539
Query: 559 TGLVSTNI-SESIFPQLLDCGMEELVDDT 586
+S S+ I L D G+E L D T
Sbjct: 540 MSCISVGTPSDPILSFLRDWGLEPLEDYT 568
>M7XE78_RHOTO (tr|M7XE78) DNA-directed RNA polymerase II subunit RPB2
OS=Rhodosporidium toruloides NP11 GN=RHTO_00878 PE=4
SV=1
Length = 1253
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 265/566 (46%), Gaps = 47/566 (8%)
Query: 48 LGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKK 107
L E + + C +F + LVS QI+S+N+F+ +Q D G L + + S K
Sbjct: 42 LDETITQEDCWTVIAAYFADKTLVSQQIDSFNEFVNTTMQELVDESGSLILDQNMQHSGK 101
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
+ +Y +KF ++ L +P A+ M P ARL+ +TY+A + + V+ +V
Sbjct: 102 AGDATKRYE-LKFEQIYLSKPT--QTEADGTVAPMFPNEARLRNLTYSAPLYIDVKKRVL 158
Query: 168 TPHKVRSDKFKTGKEDYXXXXX--XXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD----- 220
D +TG+ + G++P+M+ SD C ++ E+ D
Sbjct: 159 VQESDEPDP-ETGELVWTEEKDDDEAGEEEKIYIGKVPIMLQSDFCILENLEEKDKLELN 217
Query: 221 -CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLILK 273
C +D GGYF+I G+EK +AQE++ +++V + + + Y ++ K + I
Sbjct: 218 ECPYDKGGYFVINGSEKVLIAQERMATNRVYVFAKSQPSPVSYLAEIRSAVEKGGKTISS 277
Query: 274 L-VGNSKFEEINNGEKVLS-VYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI-- 329
L + + E +G+ + S + ++ ++P+ ++F +L + D++I+D I Y DT++
Sbjct: 278 LQIKMMRRTERQSGQTIKSTIPYIRADIPIVVVFRALDLIPDRDILDRICYDRNDTELFE 337
Query: 330 ------QNIFFGSIRDADEKCSGFRKGKNAL------HYMEEHVKGIQYPPSESMEECLN 377
++ F RD G R AL +Y +E ++ P +
Sbjct: 338 MMKPCLEDAFPIQSRDVALDFIGRRGTVPALSRDRRMNYAQEILQKEMLP---------H 388
Query: 378 LYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHF 437
+ + PG + +KA F YMV LLLA RR+ D+RD F KR ++ F
Sbjct: 389 VSMAPGQN--TKKAFFFGYMVHRLLLAALERRELDDRDHFGAKRLDLAGPLLAALFRMLF 446
Query: 438 AHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVV 497
K + + LQ+ + + I + ++ ITNGL+ + +TG W K + +GV
Sbjct: 447 RKLTKDVYRHLQKCVETGKPFN-INSAIKSTTITNGLKYSLATGNWGDQKKAMSAKAGVS 505
Query: 498 ANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLS 557
L R T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL+
Sbjct: 506 QVLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLA 565
Query: 558 VTGLVST-NISESIFPQLLDCGMEEL 582
+ +S + S I L + GME L
Sbjct: 566 LMAYISVGSPSAPIVEFLEEWGMENL 591
>K9GQI6_PEND2 (tr|K9GQI6) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain PHI26 / CECT 20796) GN=PDIG_18090 PE=3 SV=1
Length = 1255
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 261/576 (45%), Gaps = 45/576 (7%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FFD GLVS Q++S+++FI++ +Q + G + + + PS+
Sbjct: 15 EADEGITSEDCWTVITSFFDSKGLVSQQLDSFDEFISSTMQELVEEQGQVVLDQTLPPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ + + +KFG V L RP G + MLP+ ARL+ +TYA+ + + V +
Sbjct: 75 DEIEPIVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLGVTKK 132
Query: 166 VFTPH----KVRSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVMVMSDL 210
+ K D G+ D G++P+M+ S
Sbjct: 133 IMEGRERMGKPNDDDDNDGETDPKTQGTYLEWETKQLPQEQMKEETVFIGKMPIMLKSKY 192
Query: 211 CWMKEAEKG------DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 193 CILKDLNDASLYAWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYI 251
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ LKL + G + S ++ ++P+ ++F +LGV S
Sbjct: 252 AEIRSAVEKGSRMLSSLTLKLFAKGDSAKGGFGPTIRSTLPYVKADIPIVVVFRALGVVS 311
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H + ++Y
Sbjct: 312 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSNLNHDRRVRYA 371
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+ M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 -RDIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 430
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPY 487
+ F K + + +QR + +R++ + + AS +T GL+ A +TG W
Sbjct: 431 LLASLFRTLFTRVTKDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGNWGEQK 489
Query: 488 KRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 547
K +GV L R +++ LRRT + GK+ R H +HWG VC TP+G
Sbjct: 490 KAASAKAGVSQVLSRYTFSSSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEG 549
Query: 548 ENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+ CGLVKNL++ ++ +E I ++ ME L
Sbjct: 550 QACGLVKNLALMCYITVGTPAEPIVDFMIQRNMEVL 585
>K9FQU8_PEND1 (tr|K9FQU8) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain Pd1 / CECT 20795) GN=PDIP_55940 PE=3 SV=1
Length = 1255
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 261/576 (45%), Gaps = 45/576 (7%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FFD GLVS Q++S+++FI++ +Q + G + + + PS+
Sbjct: 15 EADEGITSEDCWTVITSFFDSKGLVSQQLDSFDEFISSTMQELVEEQGQVVLDQTLPPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ + + +KFG V L RP G + MLP+ ARL+ +TYA+ + + V +
Sbjct: 75 DEIEPIVVRRYELKFGTVMLSRPSVTEG--DGATTIMLPQEARLRNLTYASPLYLGVTKK 132
Query: 166 VFTPH----KVRSDKFKTGKED-----------YXXXXXXXXXXXXXXXGRLPVMVMSDL 210
+ K D G+ D G++P+M+ S
Sbjct: 133 IMEGRERMGKPNDDDDNDGETDPKTQGTYLEWETKQLPQEQMKEETVFIGKMPIMLKSKY 192
Query: 211 CWMKEAEKG------DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C +K+ +C +D GGYF+I G+EK +AQE Q+F KK S TP
Sbjct: 193 CILKDLNDASLYAWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYI 251
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSS 312
A ++ K +R++ LKL + G + S ++ ++P+ ++F +LGV S
Sbjct: 252 AEIRSAVEKGSRMLSSLTLKLFAKGDSAKGGFGPTIRSTLPYVKADIPIVVVFRALGVVS 311
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYP 367
D++I++ I Y DT + + I + E F + + H + ++Y
Sbjct: 312 DEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQSNLNHDRRVRYA 371
Query: 368 PSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXX 427
+ M++ L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 -RDIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGP 430
Query: 428 XXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPY 487
+ F K + + +QR + +R++ + + AS +T GL+ A +TG W
Sbjct: 431 LLASLFRTLFTRVTKDLQRYVQRCVETNREIY-LNIGIKASTLTGGLKYALATGNWGEQK 489
Query: 488 KRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDG 547
K +GV L R +++ LRRT + GK+ R H +HWG VC TP+G
Sbjct: 490 KAASAKAGVSQVLSRYTFSSSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEG 549
Query: 548 ENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+ CGLVKNL++ ++ +E I ++ ME L
Sbjct: 550 QACGLVKNLALMCYITVGTPAEPIVDFMIQRNMEVL 585
>G0VJ71_NAUCC (tr|G0VJ71) DNA-directed RNA polymerase OS=Naumovozyma castellii
(strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL
Y-12630) GN=NCAS0H02400 PE=3 SV=1
Length = 1224
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 252/547 (46%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 37 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTETDNVSRKYE-IGFGKI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V+ + + V + K E
Sbjct: 96 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEAVDVPGRELKY--EL 151
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 152 IAEESEEESESGKVFIGRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSEKV 211
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 212 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSDARTIN 270
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 271 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 330
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 331 LDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMI 382
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 383 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLASLFKTLFRKLTKDIFRYMQRTVEEAHDF 442
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 443 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 501
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 502 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 561
Query: 578 GMEELVD 584
GME L D
Sbjct: 562 GMEPLED 568
>C5DLS0_LACTC (tr|C5DLS0) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G02970g PE=3 SV=1
Length = 1220
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 252/551 (45%), Gaps = 50/551 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQFI +Q + L + + + DN KY + FGK+
Sbjct: 33 FFREKGLVSQQLDSFNQFINYTIQDSIVEDSTLILEQLAQHTTEADNISRKYE-ISFGKI 91
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKV--RSDKFKTGK 181
L +P ++ M P+ ARL+ +TYA+ + V + + + + R K++
Sbjct: 92 YLAKPSMT--ESDGVSHAMYPQEARLRNLTYASGLFVEIRKRTYEAVDIPGRDLKYEVID 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAE 235
E+ GR+P+M+ S C + E + D C FD GGYF+I G+E
Sbjct: 150 EE-----SEMSDESKIFIGRVPIMLRSKYCLLDELTESDLYKLKECPFDMGGYFIINGSE 204
Query: 236 KAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEIN 284
K +AQE Q+F KK S A +L K +R I +KL G E
Sbjct: 205 KVLIAQERSAGNIVQVF-KKSAPSPISHIAEIRSALEKGSRFISTLQVKLYGR---EGST 260
Query: 285 NGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS------IR 338
N ++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + I+
Sbjct: 261 NRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLELLKPCVEEGFVIQ 320
Query: 339 DADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFL 394
D + + AL +E K IQY ++ L P + L +RKA FL
Sbjct: 321 DRETALDFIGRRGTALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFL 373
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YM+ LLL R+ D+RD F KR K F + + + +QR +
Sbjct: 374 GYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEE 433
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
+D ++ + A+ IT GL+ A +TG W K + +GV L R T++ LRR
Sbjct: 434 AKDFN-LKLAVKATTITAGLKYALATGNWGEQKKAMTSRAGVSQVLNRYTYSSTLSHLRR 492
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQ 573
T + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I
Sbjct: 493 TNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPLPIITF 552
Query: 574 LLDCGMEELVD 584
L + GME L D
Sbjct: 553 LNEWGMEPLED 563
>K9HUT9_AGABB (tr|K9HUT9) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_113824 PE=3 SV=1
Length = 1183
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 262/559 (46%), Gaps = 39/559 (6%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E++ + C FF++ GLV Q++S+++F+ +Q D DL + D +
Sbjct: 30 EEITQEDCWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENSDL-ILDQADQHTGHE 88
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT- 168
+ + +KFG++ L RP A+ + P+ ARL+ +TY+A + + + +V
Sbjct: 89 TDMTRRYEIKFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMRKRVLVG 146
Query: 169 ---PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD----- 220
P ++ KED+ G++P+M+ S C ++ + D
Sbjct: 147 REDPDTAGEIAWEAEKEDHPDDATKVWI------GKVPIMLRSTFCILRGLQDQDLYDLN 200
Query: 221 -CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI-- 271
C +D GGYF+I G+EK +AQE++ ++V + I + ++ K + I
Sbjct: 201 ECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQ 260
Query: 272 --LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+K+ ++ + N K ++ ++ V++P+W++F LGV SD++I++ I Y +D Q+
Sbjct: 261 FQVKMFHRNQERSLGNVMKA-TIPYIKVDIPIWVVFRGLGVISDRDILEHICYDMQDAQM 319
Query: 330 QNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGS 384
+ I D D + + G + I+Y +E L ++ + GS
Sbjct: 320 LEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGS 379
Query: 385 SGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRM 444
++KA F YM+ LLLA RR+ D+RD F KR ++ F K +
Sbjct: 380 E--SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDV 437
Query: 445 SKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 504
+ LQ+ + ++ + + ITNGL+ + +TG W K + +GV L R
Sbjct: 438 YRYLQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYT 496
Query: 505 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST 564
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S
Sbjct: 497 YASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISV 556
Query: 565 -NISESIFPQLLDCGMEEL 582
+ S + L + G+E L
Sbjct: 557 GSYSAPVIEFLEEWGLESL 575
>J7JNY3_9LECA (tr|J7JNY3) DNA-directed RNA polymerase OS=Peltigera malacea
GN=rpbII PE=3 SV=1
Length = 1255
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 255/555 (45%), Gaps = 60/555 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD GLVS Q++S+++F++ +Q L + + PS D +
Sbjct: 25 CWTVISSFFDSKGLVSQQLDSFDEFVSTTMQELVAENSVLTLDQNAPPSDSDDPILIRRY 84
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRS 174
+KFG V L RP G + MLP+ ARL+ +TY++ + ++T +V + V
Sbjct: 85 EIKFGTVLLSRPAMTEGDGSTS--TMLPQEARLRNLTYSSPLYLEMTKKVSIARERVV-- 140
Query: 175 DKFKTGKEDYXXXXXXXXX-------------------XXXXXXGRLPVMVMSDLCWMK- 214
F+ ED G+LP+M+ S C +K
Sbjct: 141 --FENADEDPNPDSDAQKRFGADANLDWVIEDGDDDQDPSKVFVGKLPIMLKSKYCILKD 198
Query: 215 --EAEK---GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYK 262
EAE +C +D GGYF+I G+EK +AQE Q+F KK S TP A
Sbjct: 199 LGEAELYNWNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAPPSATPYVAEIRS 257
Query: 263 SLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEII 317
++ K +RLI +KL + + G+ V ++ ++ +VP+ I+F +LG+ SD++I+
Sbjct: 258 AVEKGSRLISSMQIKLFAKGENHKGGFGQTVKATLPYVKTDVPIGIVFRALGIVSDEDIL 317
Query: 318 DLIDYGNEDTQ--------IQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPS 369
+ I Y DTQ I+ F R+ G R +L K ++Y
Sbjct: 318 NHICYDRNDTQMLEKLKPCIEEAFVIQDREVALDWIGSRGNSQSL----SRPKRVKYA-R 372
Query: 370 ESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXX 429
+ M++ L ++ +KA FL YMV +L GRR+ D+RD F KR
Sbjct: 373 DIMQKELLPHISQTDGSETKKAFFLGYMVHRMLQCALGRREVDDRDHFGKKRLDLAGPLL 432
Query: 430 XXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKR 489
++ F K + K LQ+ + +R+ + + ++ +TNGL+ + +TG W K
Sbjct: 433 AGLFRMLFNKLTKDVFKYLQKCVENNREFN-LTLGVKSTTLTNGLKYSLATGNWGDQKKA 491
Query: 490 LERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 549
+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+
Sbjct: 492 ASSKAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQA 551
Query: 550 CGLVKNLSVTGLVST 564
CGLVKNL++ ++
Sbjct: 552 CGLVKNLALMCYITV 566
>Q9UVA1_CANAX (tr|Q9UVA1) DNA-directed RNA polymerase (Fragment) OS=Candida
albicans GN=RPB2 PE=3 SV=1
Length = 1210
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 262/562 (46%), Gaps = 39/562 (6%)
Query: 48 LGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKK 107
+ E + + C FF E GLVS Q++S+++F+ +Q L + + +
Sbjct: 16 IDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLILDQPAQHTSE 75
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
D+E+ +Y + FGK+ + +P G + + P+ ARL+ +TY++ + V + +VF
Sbjct: 76 KDHENKRYE-ITFGKIYISKPSQTEGDGSTH--AVFPQEARLRNLTYSSPLYVDMTSKVF 132
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDC 221
K +K K + ++ G++P+M+ S C +++ E +C
Sbjct: 133 ---KSDDNKRKDNELEWIQEEPDKDTETKVFLGKVPIMLRSKFCMLRDLAEHEFYELKEC 189
Query: 222 DFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI--- 271
+D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 190 PYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSM 248
Query: 272 -LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+KL G E+ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 249 QIKLYGRD--EKGVSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQM 306
Query: 330 QNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPG 383
+ + + E F + L E K IQY +E L N+ G
Sbjct: 307 LEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQYAKDILQKELLPNITQEEG 364
Query: 384 SSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
RKA FL YMV LLL R++ D+RD F KR ++ F K
Sbjct: 365 FE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKD 422
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 503
+ +QR + D + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 IYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLATGNWGEQRKAMSSRAGVSQVLNRY 481
Query: 504 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVS 563
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 482 TYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCIS 541
Query: 564 TNI-SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 542 VGTPSEPILGFLRDYGLEVLED 563
>D2WKH9_MAIZE (tr|D2WKH9) Mutant required to maintain repression 7-1/RNA
polymerase D second largest subunit 2-1 OS=Zea mays PE=2
SV=1
Length = 286
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 40 SNAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVT 99
SNA I ++ + ++ FC +ASR FFDE GL+SHQINSYN+F++ GLQ FD+ G++ V
Sbjct: 76 SNAPI--DMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVE 133
Query: 100 PSYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQ-EFKMLPRHARLQRMTYAAKM 158
P YDPSKKG +K+A +KFG+V L++P FW G +FK P HARLQ MTYA+++
Sbjct: 134 PGYDPSKKGSG-GWKHAIIKFGRVKLEKPVFWTGKDEGSVDFK--PWHARLQNMTYASRL 190
Query: 159 KVTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK 218
V V +QV++ K SDK KTG + + G LPVMV S+LC + +
Sbjct: 191 IVEVTIQVYSLEK--SDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNE 248
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTP 255
+C FD GGYFL+KG EK F+AQEQ L++LW+S+ P
Sbjct: 249 SECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRP 285
>C5PAW2_COCP7 (tr|C5PAW2) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_041900 PE=3 SV=1
Length = 1258
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 260/584 (44%), Gaps = 57/584 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P +
Sbjct: 15 EAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTIAPDE 74
Query: 107 KG-DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DDPDPVMVRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKK 132
Query: 166 VFTPHK--------------VRSDKFKTGKEDY-----XXXXXXXXXXXXXXXGRLPVMV 206
+ + + D+ + + Y G++P+M+
Sbjct: 133 IAEGRERSLAERDEDDDEPDAKGDEERRARGTYLQWEPKALPEDEADEENIFIGKMPIML 192
Query: 207 MSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 193 KSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSP 251
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSL 308
TP A ++ K +R++ +KL + G + S ++ ++P+ ++F +L
Sbjct: 252 TPYVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKTDIPIVVVFRAL 311
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKG 363
GV SD++I++ I Y DT + + I + E F + + H K
Sbjct: 312 GVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKR 371
Query: 364 IQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFX 423
++Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 VRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLD 430
Query: 424 XXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFS 479
+V F K + K +QR + +R + YL+ AS +T GL+ A +
Sbjct: 431 LAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQL-----YLNIGVKASTLTGGLKYALA 485
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K +GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 486 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 545
Query: 540 CFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 CPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 589
>Q5A8Y5_CANAL (tr|Q5A8Y5) DNA-directed RNA polymerase OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RPB140 PE=3 SV=1
Length = 1234
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 262/562 (46%), Gaps = 39/562 (6%)
Query: 48 LGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKK 107
+ E + + C FF E GLVS Q++S+++F+ +Q L + + +
Sbjct: 16 IDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLILDQPAQHTSE 75
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
D+E+ +Y + FGK+ + +P G + + P+ ARL+ +TY++ + V + +VF
Sbjct: 76 KDHENKRYE-ITFGKIYISKPSQTEGDGSTH--AVFPQEARLRNLTYSSPLYVDMTSKVF 132
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDC 221
K +K K + ++ G++P+M+ S C +++ E +C
Sbjct: 133 ---KSDDNKRKDNELEWIQEEPDKDTETKVFLGKVPIMLRSKFCMLRDLAEHEFYELKEC 189
Query: 222 DFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI--- 271
+D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 190 PYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSM 248
Query: 272 -LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+KL G E+ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 249 QIKLYGRD--EKGVSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQM 306
Query: 330 QNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPG 383
+ + + E F + L E K IQY +E L N+ G
Sbjct: 307 LEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQYAKDILQKELLPNITQEEG 364
Query: 384 SSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
RKA FL YMV LLL R++ D+RD F KR ++ F K
Sbjct: 365 FE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKD 422
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 503
+ +QR + D + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 IYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLATGNWGEQRKAMSSRAGVSQVLNRY 481
Query: 504 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVS 563
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 482 TYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCIS 541
Query: 564 TNI-SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 542 VGTPSEPILGFLRDYGLEVLED 563
>C4YFA4_CANAW (tr|C4YFA4) DNA-directed RNA polymerase OS=Candida albicans (strain
WO-1) GN=CAWG_01218 PE=3 SV=1
Length = 1234
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 262/562 (46%), Gaps = 39/562 (6%)
Query: 48 LGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKK 107
+ E + + C FF E GLVS Q++S+++F+ +Q L + + +
Sbjct: 16 IDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLILDQPAQHTSE 75
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
D+E+ +Y + FGK+ + +P G + + P+ ARL+ +TY++ + V + +VF
Sbjct: 76 KDHENKRYE-ITFGKIYISKPSQTEGDGSTH--AVFPQEARLRNLTYSSPLYVDMTSKVF 132
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDC 221
K +K K + ++ G++P+M+ S C +++ E +C
Sbjct: 133 ---KSDDNKRKDNELEWIQEEPDKDTETKVFLGKVPIMLRSKFCMLRDLAEHEFYELKEC 189
Query: 222 DFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI--- 271
+D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 190 PYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSM 248
Query: 272 -LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+KL G E+ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 249 QIKLYGRD--EKGVSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQM 306
Query: 330 QNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPG 383
+ + + E F + L E K IQY +E L N+ G
Sbjct: 307 LEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQYAKDILQKELLPNITQEEG 364
Query: 384 SSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
RKA FL YMV LLL R++ D+RD F KR ++ F K
Sbjct: 365 FE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKD 422
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 503
+ +QR + D + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 IYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLATGNWGEQRKAMSSRAGVSQVLNRY 481
Query: 504 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVS 563
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 482 TYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCIS 541
Query: 564 TNI-SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 542 VGTPSEPILGFLRDYGLEVLED 563
>L8G9U0_GEOD2 (tr|L8G9U0) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_03987 PE=3
SV=1
Length = 1272
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 263/581 (45%), Gaps = 63/581 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+ GLVS Q++S+++F++ +Q + L + + P G+ +
Sbjct: 29 CWTVISSFFESKGLVSQQLDSFDEFVSTSMQDLINENSQLTLDQNNPPPVNGEPIQLRRY 88
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVEVQVFTPH 170
+KF V + P G + ++ P+ ARL+ +TY++ + KV++ V+ TP
Sbjct: 89 EIKFRTVFIAEPMMTEG--DGTTARLFPQEARLRNLTYSSALYIHLDKKVSIAVERPTPL 146
Query: 171 KVRSD--------------KFKTGKEDYXXXXXXXXXXXXXXX---------GRLPVMVM 207
D K ED G+LP+M+
Sbjct: 147 NELDDDEQAELAAGGDHPTKVVWEIEDQSMSQEEAAKLPANERPVTAEPFFIGKLPIMLK 206
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S T
Sbjct: 207 SKYCNLKDMDDDELYGWNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKPPPSPT 265
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLG 309
P A +L K +RLI +KL + + G+ + S ++ ++P+ ++F +LG
Sbjct: 266 PFIAEIRSALEKGSRLISSLTIKLHSKGDTQRGSFGQTIKSTLPYIKSDIPIAVVFRALG 325
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPS 369
V SD++I++ + Y +DTQ+ + I E+ + + AL ++ + + + P
Sbjct: 326 VVSDEDILNHVCYDRKDTQMLEMMKPCI----EEAFVIQDREVALDFIGKRGQSLGVPRD 381
Query: 370 ESMEECLNLY---LFPGSS----GLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
+ ++ ++ L P S RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 382 KRIKHARDIMQKELLPHISQKEGSETRKAFFLGYMVHKLLQCALGRRETDDRDHFGKKRL 441
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ F + K +QR + ++ P + A+ +TNGL+ + +TG
Sbjct: 442 DLAGPLLAKLFRNLFRKLTGDLYKYIQRCVENKKEFNPALG-IKATTLTNGLKYSLATGN 500
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 501 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 560
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ V+ SE I ++ ME L
Sbjct: 561 ETPEGQACGLVKNLALMCYVTVGTPSEPIIEFMIQRSMEVL 601
>B9W6V2_CANDC (tr|B9W6V2) DNA-directed RNA polymerase OS=Candida dubliniensis
(strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 /
NRRL Y-17841) GN=CD36_01460 PE=3 SV=1
Length = 1234
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 262/562 (46%), Gaps = 39/562 (6%)
Query: 48 LGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKK 107
+ E + + C FF E GLVS Q++S+++F+ +Q L + + +
Sbjct: 16 IDEPITQEDCWTVITSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLILDQPAQHTSE 75
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
D+E+ +Y + FGK+ + +P G + + P+ ARL+ +TY++ + V + +VF
Sbjct: 76 KDHENKRYE-ITFGKIYISKPSQTEGDGSTH--AVFPQEARLRNLTYSSPLYVDMTSKVF 132
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDC 221
K +K K + ++ G++P+M+ S C +++ E +C
Sbjct: 133 ---KSDDNKRKDNELEWIQEEPDKDTETKVFLGKVPIMLRSKFCMLRDLAEHEFYELKEC 189
Query: 222 DFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI--- 271
+D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 190 PYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSM 248
Query: 272 -LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+KL G E+ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 249 QIKLYGRD--EKGVSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQM 306
Query: 330 QNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPG 383
+ + + E F + L E K IQY +E L N+ G
Sbjct: 307 LEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQYAKDILQKELLPNITQEEG 364
Query: 384 SSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
RKA FL YMV LLL R++ D+RD F KR ++ F K
Sbjct: 365 FE--TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKD 422
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRT 503
+ +QR + D + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 IYNYMQRCVENGGDFN-VTLAVKSQTITDGLRYSLATGNWGEQRKAMSSRAGVSQVLNRY 481
Query: 504 NPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVS 563
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 482 TYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCIS 541
Query: 564 TNI-SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 542 VGTPSEPILGFLRDYGLEVLED 563
>K5Y7D9_AGABU (tr|K5Y7D9) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_117576 PE=3 SV=1
Length = 1220
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 262/559 (46%), Gaps = 39/559 (6%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E++ + C FF++ GLV Q++S+++F+ +Q D DL + D +
Sbjct: 24 EEITQEDCWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENSDL-ILDQADQHTGHE 82
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT- 168
+ + +KFG++ L RP A+ + P+ ARL+ +TY+A + + + +V
Sbjct: 83 TDMTRRYEIKFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMRKRVLVG 140
Query: 169 ---PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD----- 220
P ++ KED+ G++P+M+ S C ++ + D
Sbjct: 141 REDPDTPGEIAWEAEKEDHPDDATKVWI------GKVPIMLRSTFCILRGLQDQDLYDLN 194
Query: 221 -CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI-- 271
C +D GGYF+I G+EK +AQE++ ++V + I + ++ K + I
Sbjct: 195 ECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQ 254
Query: 272 --LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+K+ ++ + N K ++ ++ V++P+W++F LGV SD++I++ I Y +D Q+
Sbjct: 255 FQVKMFHRNQERSLGNVMKA-TIPYIKVDIPIWVVFRGLGVISDRDILEHICYDMQDAQM 313
Query: 330 QNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGS 384
+ I D D + + G + I+Y +E L ++ + GS
Sbjct: 314 LEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGS 373
Query: 385 SGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRM 444
++KA F YM+ LLLA RR+ D+RD F KR ++ F K +
Sbjct: 374 E--SKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDV 431
Query: 445 SKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 504
+ LQ+ + ++ + + ITNGL+ + +TG W K + +GV L R
Sbjct: 432 YRYLQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYT 490
Query: 505 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST 564
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S
Sbjct: 491 YASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISV 550
Query: 565 -NISESIFPQLLDCGMEEL 582
+ S + L + G+E L
Sbjct: 551 GSYSAPVIEFLEEWGLESL 569
>E9DJ48_COCPS (tr|E9DJ48) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_09847 PE=3 SV=1
Length = 1205
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 260/584 (44%), Gaps = 57/584 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P +
Sbjct: 15 EAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTIAPDE 74
Query: 107 KG-DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DDPDPVMVRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKK 132
Query: 166 VFTPHK--------------VRSDKFKTGKEDY-----XXXXXXXXXXXXXXXGRLPVMV 206
+ + + D+ + + Y G++P+M+
Sbjct: 133 IAEGRERSLAERDEDDDEPDAKGDEERRARGTYLQWEPKALPEDEADEENIFIGKMPIML 192
Query: 207 MSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 193 KSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSP 251
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSL 308
TP A ++ K +R++ +KL + G + S ++ ++P+ ++F +L
Sbjct: 252 TPYVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKTDIPIVVVFRAL 311
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKG 363
GV SD++I++ I Y DT + + I + E F + + H K
Sbjct: 312 GVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKR 371
Query: 364 IQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFX 423
++Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 VRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLD 430
Query: 424 XXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFS 479
+V F K + K +QR + +R + YL+ AS +T GL+ A +
Sbjct: 431 LAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQL-----YLNIGVKASTLTGGLKYALA 485
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K +GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 486 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 545
Query: 540 CFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 CPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 589
>J3K4V5_COCIM (tr|J3K4V5) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_07813 PE=3 SV=1
Length = 1258
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 260/584 (44%), Gaps = 57/584 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P +
Sbjct: 15 EAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTIAPDE 74
Query: 107 KG-DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DDPDPVMVRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKK 132
Query: 166 VFTPHK--------------VRSDKFKTGKEDY-----XXXXXXXXXXXXXXXGRLPVMV 206
+ + + D+ + + Y G++P+M+
Sbjct: 133 IAEGRERSLAERDEDDDEPDAKGDEERRARGTYLQWEPKALPEDEADEENIFIGKMPIML 192
Query: 207 MSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 193 KSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSP 251
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSL 308
TP A ++ K +R++ +KL + G + S ++ ++P+ ++F +L
Sbjct: 252 TPYVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKTDIPIVVVFRAL 311
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKG 363
GV SD++I++ I Y DT + + I + E F + + H K
Sbjct: 312 GVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKR 371
Query: 364 IQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFX 423
++Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 VRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLD 430
Query: 424 XXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFS 479
+V F K + K +QR + +R + YL+ AS +T GL+ A +
Sbjct: 431 LAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQL-----YLNIGVKASTLTGGLKYALA 485
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K +GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 486 TGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLV 545
Query: 540 CFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 CPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 589
>Q4Y5W4_PLACH (tr|Q4Y5W4) DNA-directed RNA polymerase II second largest subunit,
putative (Fragment) OS=Plasmodium chabaudi
GN=PC000741.00.0 PE=3 SV=1
Length = 727
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 252/557 (45%), Gaps = 50/557 (8%)
Query: 68 HGLVSHQINSYNQFIAAGLQAAFDAFGDLNV--TPSYDPSKKGDNEHFKYATVKFGKVTL 125
HGLV+ QI SYN FI +Q D + + P Y P K +N + Y+ +KFG+++L
Sbjct: 46 HGLVNQQIESYNDFIEYRMQEIIDEHPHIEIKPQPQYRPDKD-ENTNIIYS-LKFGQLSL 103
Query: 126 DRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKEDYX 185
DRP F N + P+ ARL+ +TY++ + + +E + + + K Y
Sbjct: 104 DRPFF--DEKNLVNKNLWPQEARLRNLTYSSAIYIDIEQSTYMIDETTKKQILKEKFVYE 161
Query: 186 XXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKAFV 239
GR+P+M+ S CW K ++ G+C D GGYF++ G EK V
Sbjct: 162 RINL----------GRIPLMLKSMFCWTKGLPENDISDMGECSLDQGGYFIVNGGEKVLV 211
Query: 240 AQEQLFLKKLWV-----SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEK------ 288
AQE++ ++V S+ W +S ++++ K + +
Sbjct: 212 AQERMANNFIYVFKKKHSSKFGWIAEIRSQMEKSQATSGFSVKMKTKSGSRSGGSGRSSG 271
Query: 289 ---VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCS 345
V ++ ++ E+ V ILF +LG +SD++I+ I Y D + NI +R+ E+C
Sbjct: 272 GLLVATLPYIRTEISVGILFRALGCTSDRDILQRIVYDFNDKMMINI----MRETLEECI 327
Query: 346 GFRKGKNALHYM--------EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYM 397
+ L Y+ K I Y +E L ++ G+ ++K+ F+ YM
Sbjct: 328 DYPTQDICLDYIGKRGPTVGASRDKRILYAKELLRKEVLP-HMGTGAGVESKKSYFIGYM 386
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
+ LLLA GR K D+RD F KR +F K + + LQR ++ ++
Sbjct: 387 INRLLLAELGRIKEDDRDHFGKKRLDIAGPLMASSFATYFRKMAKDVRRVLQRQIDNNKP 446
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
S IT G+Q +TG W +GV L R ++ LRR
Sbjct: 447 FDVAGAIRSCSQITQGMQYQLATGNWGKDKDGKVIRTGVAQVLNRLTYSSCLSHLRRLNT 506
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-ESIFPQLLD 576
+ GK+ R H +HWG +C TP+G++ GLVKNLS+ +S S +I+ L +
Sbjct: 507 PLGREGKMAKPRQLHNTHWGMICPFETPEGQSVGLVKNLSLMCDISVGTSTNNIYEFLTE 566
Query: 577 CGMEELVDDTTTFLSKK 593
G+E L + L++K
Sbjct: 567 WGLESLDEVPPQLLNEK 583
>I1CJ91_RHIO9 (tr|I1CJ91) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_13232 PE=3 SV=1
Length = 1193
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 263/565 (46%), Gaps = 33/565 (5%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + + C FF+E GLV Q++S+++F+ +Q D +L + GD
Sbjct: 5 EPITQEDCWTVIGSFFEEKGLVRQQLDSFDEFVQNTMQELVDENSNLVLQ-----HVGGD 59
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
+ K + FG++ L +P ++Q M P+ AR++ +TYAA + + + +
Sbjct: 60 GDVTKRYIIDFGQIYLSKPTMTEADGSSQ--PMFPQEARIRNLTYAAPLYIDMSKRTQIA 117
Query: 170 HKVRSDKFKTGKED-YXXXXXXXXXXXXXXXGRLPVMVMSDLCW---MKEAEKGD---CD 222
+ +T D + G++PVM+ S C M E E D C
Sbjct: 118 RPQDPNDPRTNPNDLFVDEGSEAPPKTKVFVGKVPVMLRSSYCILHDMPEKEMHDLNECS 177
Query: 223 FDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY---------KSLNKRNRLIL 272
FD GGYF+I G+EK +AQE++ ++V S P + K + L +
Sbjct: 178 FDMGGYFVINGSEKVLIAQERMATNTVYVFSKAPPATFSFSAEIRSQPEKGSKNASPLFI 237
Query: 273 KLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQN 331
K++ S E G+ + ++ ++ E+PV I+F +LG SD+++++ I Y D ++
Sbjct: 238 KMMRPSA-ERGTAGQFIRAALPYIRSEIPVVIVFRALGQVSDRDVLEHICYDRNDYEMLE 296
Query: 332 IFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL 387
+ SI +A D+ + GK + I+Y SE +++ L ++
Sbjct: 297 LLKPSIEEAFVIQDQDVALDFIGKRGTTVGATRERRIKYA-SEILQKELLPHVGTAYKTE 355
Query: 388 NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKA 447
RK+ F YM+ LLLA RR+ D+RD + KR ++ F + ++K
Sbjct: 356 TRKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFRKLTRDVAKY 415
Query: 448 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 507
LQ+ + R+ + + ++ ITNGL+ + +TG W K ++ +GV L R
Sbjct: 416 LQKCIESSREFN-LSLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFAS 474
Query: 508 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS 567
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S S
Sbjct: 475 TLSHLRRCNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLALMSYISVGSS 534
Query: 568 ESIFPQLL-DCGMEELVDDTTTFLS 591
+ L + ME L + + T ++
Sbjct: 535 ANPLIMFLEEWAMENLEELSATSIA 559
>A8N2R8_COPC7 (tr|A8N2R8) DNA-directed RNA polymerase OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_15845 PE=3 SV=1
Length = 1222
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 265/565 (46%), Gaps = 43/565 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD+ GLV Q++S+++F+ +Q D DL + + + + + +Y
Sbjct: 34 CWTVISSFFDQKGLVRQQLDSFDEFVQNTMQELVDENSDLILDQADQHTGQAGDMTRRYE 93
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+KFG++ L RP A+ + P+ ARL+ +TY+A + + + +V R D
Sbjct: 94 -IKFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMRKRVLVG---REDP 147
Query: 177 FKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYF 229
G + G++P+M+ S C + E D C +D GGYF
Sbjct: 148 AVPGDITWEAEHEDTDGDAAKIWIGKVPIMLRSSFCILHELRDQDLYDLNECPYDSGGYF 207
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNKR-----NRLILKLVGNSK 279
+I G+EK +AQE++ ++V + ++ +S +R ++ +K+ ++
Sbjct: 208 IINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVERGGKTISQFQVKMFHRNQ 267
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
+ N K ++ ++ V++P+W++F +LGV SD++I++ I Y +D Q+ + I D
Sbjct: 268 ERSLGNVMKA-TIPYIKVDIPIWVVFRALGVISDRDILEHICYDMQDAQMLEMLKPCIDD 326
Query: 340 ADEKCSGF--RKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFPGSS----GLNRK 390
GF + + AL ++ P + +E L + P S ++K
Sbjct: 327 ------GFVIQDREVALDFIGNRGTTTGLPRDRRIRYAQEILQKEMLPHISMAEGSESKK 380
Query: 391 ARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQR 450
A F YM+ LLLA RR+ D+RD F KR ++ F K + + LQ+
Sbjct: 381 AYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDVYRYLQK 440
Query: 451 DLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMA 510
+ ++ + + ITNGL+ + +TG W K + +GV L R T++
Sbjct: 441 CVETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYASTLS 499
Query: 511 ELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISES 569
LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S + S
Sbjct: 500 HLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMACISVGSYSAP 559
Query: 570 IFPQLLDCGMEELVDD--TTTFLSK 592
+ L + G+E L ++ +TT +K
Sbjct: 560 VIEFLEEWGLESLEENAHSTTPCTK 584
>C1H7W3_PARBA (tr|C1H7W3) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=PAAG_06854
PE=3 SV=1
Length = 1258
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 260/583 (44%), Gaps = 56/583 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+
Sbjct: 15 EQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DEVDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKR 132
Query: 166 VFTPHK------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVM 207
V + R ++ + GR+P+M+
Sbjct: 133 VTEGRERLISERDDADQDEQDNDEDRRNRGTYLHWEPKALNEDEPEEENVFIGRMPIMLK 192
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S T
Sbjct: 193 SKYCILKDLNEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPT 251
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLG 309
P A ++ K +R++ +KL + G + S ++ ++P+ ++F +LG
Sbjct: 252 PYVAEIRSAVEKGSRILSQLSIKLFAKGDTSKGGFGPTIRSTLPYIKTDIPIVVVFRALG 311
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGI 364
V SD++I++ I Y DT + + I + E F + + H K +
Sbjct: 312 VVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRV 371
Query: 365 QYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXX 424
+Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 RYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDL 430
Query: 425 XXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFST 480
++ F K + K +QR + +R + YL+ AS ++ GL+ A +T
Sbjct: 431 AGPLLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALAT 485
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 GNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 545
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 PAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>I1CGX0_RHIO9 (tr|I1CGX0) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_12411 PE=3 SV=1
Length = 1215
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 264/566 (46%), Gaps = 35/566 (6%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + + C FF+E GLV Q++S+++F+ +Q D +L + GD
Sbjct: 27 ESITQEDCWTVIGSFFEEKGLVRQQLDSFDEFVQNTMQELVDENSNLVLQ-----HVGGD 81
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVE--VQVF 167
+ K + FG++ L +P ++Q M P+ AR++ +TYAA + + + Q+
Sbjct: 82 GDVTKRYIIDFGQIYLSKPTMTEADGSSQ--PMFPQEARIRNLTYAAPLYIDMSKRTQIA 139
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCW---MKEAEKGD---C 221
P ++ + + G++PVM+ S C M E E D C
Sbjct: 140 RPQDP-NNPITNPNDFFIDEGSEAPPKTKVFVGKVPVMLRSSYCILHDMPEKEMHDLNEC 198
Query: 222 DFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY---------KSLNKRNRLI 271
FD GGYF+I G+EK +AQE++ ++V S P + K + L
Sbjct: 199 SFDMGGYFVINGSEKVLIAQERMATNTVYVFSKAPPATFSFSAEIRSQPEKGSKNASPLF 258
Query: 272 LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQ 330
+K++ S E G+ + ++ ++ E+PV I+F +LG SD+++++ I Y D ++
Sbjct: 259 IKMMRPSA-ERGTAGQFIRAALPYIRSEIPVVIVFRALGQVSDRDVLEHICYDRNDYEML 317
Query: 331 NIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSG 386
+ SI +A D+ + GK + I+Y SE +++ L ++
Sbjct: 318 ELLKPSIEEAFVIQDQDVALDFIGKRGTTVGATRERRIKYA-SEILQKELLPHVGTAYKT 376
Query: 387 LNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSK 446
RK+ F YM+ LLLA RR+ D+RD + KR ++ F + ++K
Sbjct: 377 ETRKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFRKLTRDVAK 436
Query: 447 ALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPL 506
LQ+ + R+ + + ++ ITNGL+ + +TG W K ++ +GV L R
Sbjct: 437 YLQKCIESSREFN-LSLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFA 495
Query: 507 QTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI 566
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S
Sbjct: 496 STLSHLRRCNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLALMSYISVGS 555
Query: 567 SESIFPQLL-DCGMEELVDDTTTFLS 591
S + L + ME L + + T ++
Sbjct: 556 SANPLIMFLEEWAMENLEELSATSIA 581
>C1GAQ4_PARBD (tr|C1GAQ4) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_04340 PE=3 SV=1
Length = 1258
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 260/583 (44%), Gaps = 56/583 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+
Sbjct: 15 EQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DEVDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKR 132
Query: 166 VFTPHK------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVM 207
V + R ++ + GR+P+M+
Sbjct: 133 VTEGRERLISERDDADQDEQDNDEDRRNRGTYLHWEPKALNEDEPEEENVFIGRMPIMLK 192
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S T
Sbjct: 193 SKYCILKDLNEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPT 251
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLG 309
P A ++ K +R++ +KL + G + S ++ ++P+ ++F +LG
Sbjct: 252 PYVAEIRSAVEKGSRILSQLSIKLFAKGDTSKGGFGPTIRSTLPYIKTDIPIVVVFRALG 311
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGI 364
V SD++I++ I Y DT + + I + E F + + H K +
Sbjct: 312 VVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRV 371
Query: 365 QYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXX 424
+Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 RYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDL 430
Query: 425 XXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFST 480
++ F K + K +QR + +R + YL+ AS ++ GL+ A +T
Sbjct: 431 AGPLLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALAT 485
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 GNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 545
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 PAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>C0S0L5_PARBP (tr|C0S0L5) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_01130 PE=3 SV=1
Length = 1258
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 260/583 (44%), Gaps = 56/583 (9%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++FI+ +Q + G + + + PS+
Sbjct: 15 EQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPSE 74
Query: 107 -KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
+ D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +
Sbjct: 75 DEVDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKR 132
Query: 166 VFTPHK------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVM 207
V + R ++ + GR+P+M+
Sbjct: 133 VTEGRERLISERDDADQDEQDNDEDRRNRGTYLHWEPKALNEDEPEEENVFIGRMPIMLK 192
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK S T
Sbjct: 193 SKYCILKDLNEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPT 251
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLG 309
P A ++ K +R++ +KL + G + S ++ ++P+ ++F +LG
Sbjct: 252 PYVAEIRSAVEKGSRILSQLSIKLFAKGDTSKGGFGPTIRSTLPYIKTDIPIVVVFRALG 311
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGI 364
V SD++I++ I Y DT + + I + E F + + H K +
Sbjct: 312 VVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPTSMNHEKRV 371
Query: 365 QYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXX 424
+Y +E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 372 RYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDL 430
Query: 425 XXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFST 480
++ F K + K +QR + +R + YL+ AS ++ GL+ A +T
Sbjct: 431 AGPLLANLFRILFMRVTKDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALAT 485
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K +GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 486 GNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVC 545
Query: 541 FLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 546 PAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>H8X225_CANO9 (tr|H8X225) DNA-directed RNA polymerase OS=Candida orthopsilosis
(strain 90-125) GN=CORT_0B10440 PE=3 SV=1
Length = 1228
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 258/558 (46%), Gaps = 48/558 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF E GLVS Q++S+++FI + +Q L + + DN++ +Y
Sbjct: 22 CWTVITSFFQEKGLVSQQLDSFDEFIESTIQELIWEDSHLILDQPAQHTSDKDNKNKRYE 81
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF-TPHKVRSD 175
+ FGK+ + +P G M P+ ARL+ +TY+A + V + +VF + R D
Sbjct: 82 -ITFGKMYISKPSQTEGDGTTH--LMFPQEARLRNLTYSAPLYVDMSKKVFESDDNNRKD 138
Query: 176 KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDCDFDHGGYF 229
KE G++P+MV S C +++ E +C +D GGYF
Sbjct: 139 NELEWKEQIVQGEDSDSKVYM---GKVPIMVRSKFCMLRDLGEHEMYELKECPYDMGGYF 195
Query: 230 LIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNS 278
+I G+EK +AQE Q+F KK S A ++ K +RLI +KL G
Sbjct: 196 VINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSMQIKLYGR- 253
Query: 279 KFEEINNGEKVL--SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS 336
+E ++ + + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+ +
Sbjct: 254 --DEKSSSARTIRATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQMLEMLKPC 311
Query: 337 IRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL---- 387
+ + E F + L E K IQY ++ L L P +
Sbjct: 312 VEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNITQEEGFE 364
Query: 388 NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKA 447
RKA FL YMV LLL R++ D+RD F KR ++ F K +
Sbjct: 365 TRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKDIYNY 424
Query: 448 LQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQ 507
+QR + D++ + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 425 MQRCVENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSS 483
Query: 508 TMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI- 566
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 484 TLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTP 543
Query: 567 SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 544 SEPISSFLRDWGLEPLED 561
>R9AC13_WALIC (tr|R9AC13) DNA-directed RNA polymerase II subunit RPB2 OS=Wallemia
ichthyophaga EXF-994 GN=J056_001575 PE=4 SV=1
Length = 1205
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 260/552 (47%), Gaps = 40/552 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFDE GLV QI S+++F+ +Q D L + ++ + N+ +
Sbjct: 14 CWTVISSFFDEKGLVRQQIESFDEFVQNTMQEIVDENQRLTLD-QFNQYTQHKNDTTRRY 72
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
++FG++ L RP A+ M P ARL+ +TY+A + + ++ +V ++ +
Sbjct: 73 EIEFGQIYLSRPTM--TEADGSVSPMFPHEARLRNLTYSAPLYIDMKKKVL----IQVED 126
Query: 177 FKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYF 229
+TG + G++P+M+ S C + AE +C FD GGYF
Sbjct: 127 DETGDLVWVPEYDDESDENIKVWIGKVPIMLKSSFCNLSNVDSSRLAELNECPFDQGGYF 186
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-------------LNKRNRLILKLV 275
+I G+EK +AQE+L +++ + + Y++ + + ++ +
Sbjct: 187 IINGSEKVLIAQERLAANHVYIFAKAEPSPVSYQAEIRSAMEKGGKTVSSMQIKMFRRPQ 246
Query: 276 GNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
GN++ + + ++ ++ E+PV I+F +LG+ D+EI++ I + +D+Q+ ++
Sbjct: 247 GNAQADTMR-----ATIPYIKNEIPVIIVFRALGIVPDREILEHICFDFDDSQMLDLLKP 301
Query: 336 SIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKA 391
I +A D+ + G+ K I+Y +E L ++ +KA
Sbjct: 302 CIEEAFVVQDQNVALDFIGRRGTTTGLSKDKRIRYAKDILQKEMLP-HVATNEGSETKKA 360
Query: 392 RFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRD 451
F YM+ L+LA RR+ D+RD F KR ++ F K + + +Q+
Sbjct: 361 YFFGYMIHRLMLARLERRELDDRDHFGKKRLDLGGPLLASLFRMLFRKLSKDVYRYMQKC 420
Query: 452 LNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAE 511
+ ++ + + A+ ITNGL+ + +TG W K ++ +GV L R T++
Sbjct: 421 VETHKEFN-LNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSH 479
Query: 512 LRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESI 570
LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ VST S I
Sbjct: 480 LRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMANVSTGETSAPI 539
Query: 571 FPQLLDCGMEEL 582
L + GMEEL
Sbjct: 540 QDFLQEWGMEEL 551
>E4V307_ARTGP (tr|E4V307) DNA-directed RNA polymerase OS=Arthroderma gypseum
(strain ATCC MYA-4604 / CBS 118893) GN=MGYG_09151 PE=3
SV=1
Length = 1258
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 266/593 (44%), Gaps = 67/593 (11%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYETEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSKKGDNEH----FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM 158
PS D+EH + +KFG V L RP G + MLP+ ARL+ +TYA+ +
Sbjct: 70 PPS---DDEHDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPL 124
Query: 159 KVTVEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXX 199
+ + ++ + R ++ +
Sbjct: 125 YLGISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFI 184
Query: 200 GRLPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFL 246
G++P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F
Sbjct: 185 GKMPIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF- 243
Query: 247 KKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPV 301
KK S TP A ++ K +R++ +KL + G + S ++ ++P+
Sbjct: 244 KKAPPSPTPYVAEIRSAVEKGSRILSQLSIKLFSKGDSAKGGFGPTIRSTLPYIKTDIPI 303
Query: 302 WILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNAL 354
++F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 304 VVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPM 363
Query: 355 HYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNR 414
+E K ++Y +E L ++ RKA FL YMV LL GRR D+R
Sbjct: 364 SMNQE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDR 420
Query: 415 DDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASII 470
D F KR +V F K + K +QR + R + YL+ AS +
Sbjct: 421 DHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTL 475
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
T GL+ A +TG W K +GV L R T++ LRRT + GK+ R
Sbjct: 476 TGGLKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQ 535
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
H +HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 536 LHNTHWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>G8BY61_TETPH (tr|G8BY61) DNA-directed RNA polymerase OS=Tetrapisispora phaffii
(strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282
/ UCD 70-5) GN=TPHA0J02910 PE=3 SV=1
Length = 1224
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 249/547 (45%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 35 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 93
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ ARL+ +TY++ + V V + + V + K
Sbjct: 94 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVNKRTYEATDVPGRELKYNL-- 149
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLPVM+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 150 IAEESEEDSENDKVFIGRLPVMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSEKV 209
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 210 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGRESSSTRTIK 268
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 269 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 328
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY + L P + L +RKA FL YM+
Sbjct: 329 LDFIGRRG-TALGIKKE--KRIQY-----ARDILQKEFLPHITQLEGFESRKAFFLGYMI 380
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 381 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKLTKDIFRYMQRTVEEANDF 440
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 441 N-MKLAINAKTITSGLKYALATGNWGEQKKAMTSRAGVSQVLNRYTYSSTLSHLRRTNTP 499
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 500 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 559
Query: 578 GMEELVD 584
GME L D
Sbjct: 560 GMEPLED 566
>A3GFG5_PICST (tr|A3GFG5) DNA-directed RNA polymerase OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RPB140 PE=3 SV=2
Length = 1232
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/557 (29%), Positives = 260/557 (46%), Gaps = 46/557 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF E GLVS Q++S+++FI +Q L + + + D+E+ +Y
Sbjct: 23 CWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQHTSEDDHENRRYE 82
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+ FGK+ + +P G M P+ ARL+ +TY++ + V + +VF K ++
Sbjct: 83 -ITFGKIYISKPMQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKKVF---KSDDNR 136
Query: 177 FKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEA------EKGDCDFDHGGYF 229
K + ++ G++P+M+ S C +++ E +C +D GGYF
Sbjct: 137 RKENELEWVEEKVEDEEPQQKVFLGKVPIMLRSKFCMLRDLGEHEFFELKECPYDMGGYF 196
Query: 230 LIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNS 278
+I G+EK +AQE Q+F KK S A +L K +RLI +KL G
Sbjct: 197 VINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSALEKGSRLISSMQIKLYGRD 255
Query: 279 KFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
E+ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+ + +
Sbjct: 256 --EKGTSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQMLEMLKPCV 313
Query: 338 RDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----N 388
+ E F + L E K IQY ++ L L P + +
Sbjct: 314 EEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNITQEEGFES 366
Query: 389 RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKAL 448
RKA FL YMV LLL R++ D+RD F KR ++ F K + +
Sbjct: 367 RKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLTKDIYNYM 426
Query: 449 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 508
QR + D++ + + + IT+GL+ + +TG W K + +GV L R T
Sbjct: 427 QRCVENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSST 485
Query: 509 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-S 567
++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S S
Sbjct: 486 LSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCISVGTPS 545
Query: 568 ESIFPQLLDCGMEELVD 584
E I L + GME L D
Sbjct: 546 EPILYFLEEWGMEPLED 562
>G8B5W9_CANPC (tr|G8B5W9) DNA-directed RNA polymerase OS=Candida parapsilosis
(strain CDC 317 / ATCC MYA-4646) GN=CPAR2_109360 PE=3
SV=1
Length = 1228
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 259/560 (46%), Gaps = 52/560 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAF--DAFGDLNVTPSYDPSKKGDNEHFK 114
C FF E GLVS Q++S+++FI + +Q D+ L+ + K N+ ++
Sbjct: 22 CWTVITSFFQEKGLVSQQLDSFDEFIESTIQELIWEDSHLILDQPAQHTSEKDSKNKRYE 81
Query: 115 YATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF-TPHKVR 173
+ FGK+ + +P G M P+ ARL+ +TY+A + V + +VF + R
Sbjct: 82 ---ITFGKMYISKPSQTEGDGTTH--PMFPQEARLRNLTYSAPLYVDMSKKVFESDDNNR 136
Query: 174 SDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDCDFDHGG 227
D KE G++P+MV S C +++ E +C +D GG
Sbjct: 137 VDNELEWKEQIVQGEDSDSQVYL---GKVPIMVRSKFCMLRDLGEHEMYELKECPYDMGG 193
Query: 228 YFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVG 276
YF+I G+EK +AQE Q+F KK S A ++ K +RLI +KL G
Sbjct: 194 YFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISAMQIKLYG 252
Query: 277 NSKFEEINNGEKVL--SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFF 334
+E ++ + + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+ +
Sbjct: 253 R---DEKSSSARTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQMLEMLK 309
Query: 335 GSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG---SSG 386
+ + E F + L E K IQY ++ L L P G
Sbjct: 310 PCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNITQEEG 362
Query: 387 L-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMS 445
RKA FL YMV LLL R++ D+RD F KR ++ F K +
Sbjct: 363 FETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKDIY 422
Query: 446 KALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNP 505
+QR + D++ + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 NYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRYTY 481
Query: 506 LQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTN 565
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 482 SSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVG 541
Query: 566 I-SESIFPQLLDCGMEELVD 584
SE I L D G+E L D
Sbjct: 542 TPSEPISSFLRDWGLEPLED 561
>M5FUN5_DACSP (tr|M5FUN5) DNA-dependent RNA polymerase II second largest subunit
OS=Dacryopinax sp. (strain DJM 731) GN=DACRYDRAFT_23500
PE=4 SV=1
Length = 1258
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 260/563 (46%), Gaps = 42/563 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C + FF+E GLV Q++S+++F+ +Q D G+L + + S + +E +Y
Sbjct: 62 CWQIITSFFEEKGLVRQQLDSFDEFVQNSMQEVVDESGELILDQANQHSGRELDETKRYE 121
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT----PHKV 172
+ FG++ L RP + + P+ ARL+ +TY+A + + V+ +V + P V
Sbjct: 122 -LSFGQIYLSRPSTM--EPDGSNLPIFPQEARLRNLTYSAPLYIDVKKRVLSGRENPEDV 178
Query: 173 RSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHG 226
+ + G++PVM+ S C + GD C +D G
Sbjct: 179 NGEMIWESQN-----TDADKEIHKIWVGKVPVMLRSTFCILSGLSDGDLYDLNECPYDQG 233
Query: 227 GYFLIKGAEKAFVAQEQLFLKKLWV---------SNTPDWAIGYKSLNKRNRLILKLVGN 277
GYF+I G+EK +AQE++ ++V S+ + + K+ L+ + +
Sbjct: 234 GYFIINGSEKVLIAQERMAANHVYVFAKAQPSPISHLAEIRSQVEKGGKQISLLQIKMTH 293
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
E+ + ++ ++PV ++F +LG+ D+++++ I Y ED + + I
Sbjct: 294 RNLEKSTGSLMRAQLPYIRNDIPVVVVFRALGIVPDRDVLEHICYDPEDHAMLEMLKPCI 353
Query: 338 RDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSS----GLNR 389
+A D + + G+ K ++Y +E L + P S ++
Sbjct: 354 EEAFVIQDREVALDYIGRRGTTTGLSRDKRLRY-----AQEILQKEMLPHISTQEGAESK 408
Query: 390 KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQ 449
KA F YMV L+LA RR+ D+RD F KR ++ F K + + +Q
Sbjct: 409 KAYFFGYMVHRLVLAALDRRELDDRDHFGKKRLDLAGPLLATLFRMLFRRLTKDVYRYMQ 468
Query: 450 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 509
+ + R+ I + + ITNGL+ + +TG W K ++ +GV L R T+
Sbjct: 469 KCVETHREFN-INAAVKPATITNGLKYSLATGNWGDQKKFMQAKAGVSQVLNRYTFASTL 527
Query: 510 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISE 568
+ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S ++S+
Sbjct: 528 SHLRRTNTPIGRDGKIARPRQLHNTHWGMVCPAETPEGQACGLVKNLALMACISVGSLSQ 587
Query: 569 SIFPQLLDCGMEELVDDTTTFLS 591
+ L + G+E L D T ++
Sbjct: 588 PVVEFLEEWGLEPLGDQTNETIT 610
>J4CE27_THEOR (tr|J4CE27) DNA-directed RNA polymerase OS=Theileria orientalis
strain Shintoku GN=TOT_040000532 PE=3 SV=1
Length = 1189
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 256/560 (45%), Gaps = 63/560 (11%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF+EHGLV QI S+N FI +Q D+ + +TP + + + E+ +KFG++
Sbjct: 68 FFNEHGLVHQQIESFNDFITYRMQEIIDSHPAIEITPQPNYRPEEEEENSVLYRLKFGQL 127
Query: 124 TLDRPKFWGGAANAQEFKML-PRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKE 182
+L++P FK + P+ ARL+ +TYA+++ + +E Q F E
Sbjct: 128 SLNKPSV---EEKDGVFKHIWPQEARLRNLTYASQVYIDIEQQTFL------------NE 172
Query: 183 DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEK 236
+ R+P+M+ S CW K ++ G+C FD GGYF++ G E+
Sbjct: 173 EGNLVQTDSTVYPRVPLCRIPMMLKSAYCWTKGLTEHDLSDIGECVFDQGGYFVVNGGER 232
Query: 237 AFVAQEQLFLKKLWVSN--------------TPDWAIGYKSLNKRNRLILKLVGNSKFEE 282
+AQE++ ++V N PD++ G S + ++ NS+ +
Sbjct: 233 VLIAQERMANNFVYVFNKKNQKYSAVAQLRSQPDFSQGVTSFSI-------MILNSQLAK 285
Query: 283 INNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADE 342
+ + ++ ++ +VPV ILF +LG SD++I+ I Y DTQ+ ++ +R E
Sbjct: 286 ---NKMLAALPYVKGDVPVPILFRALGCISDRDILQRIVYDFSDTQMLSL----MRSTLE 338
Query: 343 KCSGFRKGKNALHYMEEHVKGIQYPPSESME---ECLNLYLFP------GSSGLNRKARF 393
+CS + + L Y+ + + P ++ + L + P GS ++K +
Sbjct: 339 ECSEYTSQEQCLDYIGKRGPTVGAPLEARIQYAKDLLRRHFLPHVGTEVGSE--SKKCFY 396
Query: 394 LAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLN 453
+ YM+ LLL GR D+R+ F KR F K + K LQ ++
Sbjct: 397 VGYMIHRLLLNQLGRINEDDREHFGKKRLDLAGALMASSFGALFRKLAKDVKKLLQNQID 456
Query: 454 GDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELR 513
R S IT GLQ TG W + +GV L R ++ LR
Sbjct: 457 SGRSFDVAGAIKSCSQITQGLQYQLLTGNWGRDKEGNVVRTGVSQVLNRLTFASYLSHLR 516
Query: 514 RTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIFP 572
R + GK+ R H +HWG +C TP+G+ GLVKNL++ +S +++ +I
Sbjct: 517 RLNTPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCYISVGSMTSTILD 576
Query: 573 QLLDCGMEELVDDTTTFLSK 592
LL+ GM+ L D+ + L K
Sbjct: 577 FLLEFGMDSL-DEISPVLIK 595
>G8JU71_ERECY (tr|G8JU71) DNA-directed RNA polymerase OS=Eremothecium cymbalariae
(strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL
Y-17582) GN=Ecym_4538 PE=3 SV=1
Length = 1222
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 251/548 (45%), Gaps = 44/548 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQFI +Q L + + + DN KY + FGK+
Sbjct: 33 FFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 91
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKV--RSDKFKTGK 181
L +P ++ M P+ ARL+ +TYA+ + V ++ + + V R K++ +
Sbjct: 92 YLAKPSMT--ESDGVSHAMYPQEARLRNLTYASGLFVEIKKRTYEAVDVPGRDLKYEIIQ 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAE 235
E+ GR+P+M+ S C + + + D C FD GGYF+I G+E
Sbjct: 150 EE-----SEDSEEGKIFIGRVPIMLRSKYCLLDDLSESDLYRLKECPFDMGGYFIINGSE 204
Query: 236 KAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEK 288
K +AQE Q+F KK S A +L K +R I L E +
Sbjct: 205 KVLIAQERSAGNIVQVF-KKSAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSTSRT 263
Query: 289 V-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS------IRDAD 341
+ ++ ++ +VP+ I+F +LG+ D EI++ I Y D Q+ + I+D +
Sbjct: 264 IKATLPYIKQDVPIVIIFRALGIIPDGEILEHICYDQNDWQMLEMLKPCVEEGFVIQDRE 323
Query: 342 EKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYM 397
+ AL +E K IQY ++ L P + L +RKA FL YM
Sbjct: 324 TALDFIGRRGTALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYM 376
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
+ LLL R+ D+RD F KR K F + + + +QR + +D
Sbjct: 377 INRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKD 436
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ + A+ IT GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 437 FN-LKLAVKATTITAGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNT 495
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLD 576
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 496 PIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPVPIITFLNE 555
Query: 577 CGMEELVD 584
GME L D
Sbjct: 556 WGMEPLED 563
>A7ATA0_BABBO (tr|A7ATA0) DNA-directed RNA polymerase OS=Babesia bovis
GN=BBOV_II002050 PE=3 SV=1
Length = 1207
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 252/549 (45%), Gaps = 50/549 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF+ HGLV QI S+N F+ +Q D + +TP + + E+ +KFG++
Sbjct: 68 FFNTHGLVHQQIESFNDFVTYRMQETIDQHPPIEITPQPQYHPEDERENNIVYKLKFGQL 127
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+L++P A + + P+ ARL+ +TY++++ V +E + + +R + T
Sbjct: 128 SLNKPCVEEMAGVLKH--IWPQEARLRNLTYSSQIYVDIEQKTY----LRDENTNT---- 177
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
GR+P+M+ S CW K+ A+ G+C FD GGYF++ G E+
Sbjct: 178 --ETLQETITYPRIELGRIPMMLKSAYCWTKDISEDDLADVGECPFDEGGYFIVNGGERV 235
Query: 238 FVAQEQL-------FLKK--------LWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEE 282
+ QE++ F KK + + P+++ G + + + GN +F+
Sbjct: 236 LIGQERMANNYIYIFKKKQPSKYSLVAEIRSQPEFSQGTTPFSIMMKSTSGIAGN-RFK- 293
Query: 283 INNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-- 340
++G+ V S+ +L ++P+ ILF +LG +D++I+ I Y ED Q+ + S+ +
Sbjct: 294 -SHGQLVGSIPYLKSDIPIAILFRALGCVADRDILQRIVYDFEDKQMLTLMRPSLEETAD 352
Query: 341 ---DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKARFL 394
E C F ++G +E V QY + L ++ PG +RK FL
Sbjct: 353 YSTQEMCLDFIGKRGPTVGAPLETRV---QYAKDLLRQHFLPHVGTEPGCE--SRKCYFL 407
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YMV LLL+ GR D+RD F KR F K + LQ+ ++
Sbjct: 408 GYMVHRLLLSRLGRIPEDDRDHFGKKRLDLAGSLMASSFGTLFRKMVKDTKRILQQQIDS 467
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
R+ A+ IT+GLQ TG W +GV L R ++ LRR
Sbjct: 468 GREFDVAGAVRSATQITHGLQYQLLTGNWGRDRDGKVVRTGVSQVLNRLTFASYLSHLRR 527
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
+ GK+ R H +HWG +C TP+G+ GLVKNL++ +S + S +
Sbjct: 528 LNTPLGREGKIAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCFISVGTAASTINEF 587
Query: 575 L-DCGMEEL 582
L + GM+ L
Sbjct: 588 LCEWGMDSL 596
>M9MZA2_ASHGS (tr|M9MZA2) FAFR404Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FAFR404C
PE=4 SV=1
Length = 1222
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 251/548 (45%), Gaps = 44/548 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQFI +Q L + + + DN KY + FGK+
Sbjct: 33 FFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQHTTEADNISRKYE-ISFGKI 91
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKV--RSDKFKTGK 181
L +P ++ M P+ ARL+ +TYA+ + V ++ + + + R K++ +
Sbjct: 92 YLAKPSMT--ESDGVSHAMYPQEARLRNLTYASGLFVEIKKRTYEAVDIPGRDLKYEIIQ 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAE 235
E+ GR+P+M+ S C + + + D C FD GGYF+I G+E
Sbjct: 150 EE-----SEDTEEGKIFIGRVPIMLRSKYCLLDDLSESDLYRLKECPFDMGGYFIINGSE 204
Query: 236 KAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEK 288
K +AQE Q+F KK S A +L K +R I L E +
Sbjct: 205 KVLIAQERSAGNIVQVF-KKSAPSPISHIAEIRSALEKGSRFISTLQVKLYGREGSTSRT 263
Query: 289 V-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS------IRDAD 341
+ ++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + I+D +
Sbjct: 264 IKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDQNDWQMLEMLKPCVEEGFVIQDRE 323
Query: 342 EKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYM 397
+ AL +E K IQY ++ L P + L +RKA FL YM
Sbjct: 324 TALDFIGRRGTALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYM 376
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
+ LLL R+ D+RD F KR K F + + + +QR + +D
Sbjct: 377 INRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKD 436
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ + A+ IT GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 437 FN-LKLAVKATTITAGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNT 495
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLD 576
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 496 PIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPVPIITFLNE 555
Query: 577 CGMEELVD 584
GME L D
Sbjct: 556 WGMEPLED 563
>M7SLG7_9PEZI (tr|M7SLG7) Putative dna-directed rna polymerase ii subunit rpb2
protein OS=Eutypa lata UCREL1 GN=UCREL1_7799 PE=4 SV=1
Length = 1259
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 264/572 (46%), Gaps = 50/572 (8%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNE-HFKY 115
C +F+ GLVS QI+S+N F +Q D + ++++ + S GD + K
Sbjct: 25 CWTVISSYFETKGLVSQQIDSFNDFQETTIQELIDEYSNVSLDQNTPASAPGDRQVALKR 84
Query: 116 ATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV-------FT 168
+K G +T+ RP +++ +LP R + +TYA+ + V ++ QV
Sbjct: 85 YNIKLGGITISRPVIH--ESDSTSAPLLPYECRDRNLTYASPIYVKMDTQVSACIEEPVP 142
Query: 169 PHKVRS---DKF-KTGKE----------DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM- 213
H++ S D++ KTGKE D G+LPVM+ S C +
Sbjct: 143 LHEMDSQQQDEYAKTGKEPTRLVWEDAEDTMQSIDPSKDNSAVFIGKLPVMIKSKACHLS 202
Query: 214 KEAEK-----GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGY 261
+E+E+ +C +D GGYF+I G+EK +AQE Q+F KK S A
Sbjct: 203 RESEEDLFLLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKAQPSPFSYTAEIR 261
Query: 262 KSLNKRNRLI--LKLVGNSKFEEINNGEKVLSVY----FLGVEVPVWILFFSLGVSSDKE 315
+L K +RLI L L SK + G +++ ++ ++P+ I+F +LGV SD+E
Sbjct: 262 SALEKGSRLISSLMLKLYSKGDSSRGGAYGQTIHTTLPYVKSDLPIAIVFRALGVVSDEE 321
Query: 316 IIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSES 371
I++ I Y D+ + + I +A D + + GK +
Sbjct: 322 ILNHICYDRNDSVMLEMLRPCIEEAFCIQDREVALDYIGKRGNQTTGMTRDRRIRAARDI 381
Query: 372 MEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXX 431
+++ + ++ G RKA FL YMV LL GRR D+RD F KR
Sbjct: 382 LQKEMLPHISQGEGCETRKAFFLGYMVHKLLQCALGRRDTDDRDHFGKKRLDLAGPLLAK 441
Query: 432 XXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLE 491
+ + ++ L+R ++ ++ + I + I+TNGL+ + +TG W K +
Sbjct: 442 LFRNIIRRLTQEITMHLKRCIDQNKLFQ-IHMAVKPQIVTNGLKYSLATGNWGDQKKAMS 500
Query: 492 RTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCG 551
T+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+ CG
Sbjct: 501 STAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACG 560
Query: 552 LVKNLSVTGLVSTNIS-ESIFPQLLDCGMEEL 582
LVKNLS+ +S S E I ++ ME L
Sbjct: 561 LVKNLSLMCSISVGTSTEPIIDYMITRNMEVL 592
>F4RF42_MELLP (tr|F4RF42) DNA-directed RNA polymerase OS=Melampsora
larici-populina (strain 98AG31 / pathotype 3-4-7)
GN=MELLADRAFT_47615 PE=3 SV=1
Length = 1257
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 262/562 (46%), Gaps = 55/562 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C + FF+E LVS QI+S++ F+ +Q D G L + S + K + +Y
Sbjct: 46 CWQVISAFFNERNLVSQQISSFDGFVNTTMQELVDETGSLILEQSMQYTDKAGDLTKRYE 105
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+ FG++ L RP ++ M P ARL+ +TY+A + V + +KV + +
Sbjct: 106 -ISFGQIYLSRPTMT--ESDGTVSPMFPNEARLRNLTYSAPLYVDMS----KSNKVATGE 158
Query: 177 FK--TGKEDYXXXX--XXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDCDFDHG 226
F TG+ Y G++P+M+ S+ C + + + +C FD G
Sbjct: 159 FDEVTGEPIYISDDDDNPDKNSSQIYIGKVPIMLRSEFCILDKLDDRGLYDLNECPFDQG 218
Query: 227 GYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-----LNKRNRLI----LKLVG 276
GYF+I G+EK +AQE++ ++V + I + S + K ++ + +K+ G
Sbjct: 219 GYFVINGSEKVLIAQERMAANHVYVFAKAAPSPISFLSEIRSAVEKGSKTVSTMQVKMFG 278
Query: 277 NSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
K E+ G + ++ ++ ++P+ ++F +LG+ DK+I+D I Y D + +
Sbjct: 279 GHKAEKAGGGATIKTTLPYIRNDIPIVVVFRALGIIPDKDILDHICYDRNDIDMFEMLKP 338
Query: 336 SIRDA-----DEKCSGF--RKG-------KNALHYMEEHVKGIQYPPSESMEECLNLYLF 381
+ D+ E F R+G + L Y EE ++ + P SM E
Sbjct: 339 CLEDSFPIQEQEVALDFIGRRGTATGLSREKRLKYAEEILQK-EMLPHISMSE------- 390
Query: 382 PGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHAR 441
G G +KA F YMV LLLA RR D+RD F KR ++ F
Sbjct: 391 -GQQG--KKAYFFGYMVHRLLLAALERRDLDDRDHFGKKRLDLAGPLLAGLFRMLFRKLT 447
Query: 442 KRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 501
K + + LQ+ + + + + ++ ITNGL+ + +TG W K ++ +GV L
Sbjct: 448 KDVYRHLQKCVEMQKPFN-LNTAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLN 506
Query: 502 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
R T++ LRR + GK+ R H SHWG VC TP+G+ CGLVKNL++
Sbjct: 507 RYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNSHWGMVCPAETPEGQACGLVKNLALMSY 566
Query: 562 VST-NISESIFPQLLDCGMEEL 582
+S + S I L + GME L
Sbjct: 567 ISVGSPSAPIVEFLEEWGMESL 588
>I4YEC5_WALSC (tr|I4YEC5) DNA-directed RNA polymerase OS=Wallemia sebi (strain
ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_32026 PE=3
SV=1
Length = 1198
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 262/552 (47%), Gaps = 40/552 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFDE GLV QI+S+++F+ +Q + L + ++ + N+ +
Sbjct: 7 CWTVISSFFDEKGLVRQQIDSFDEFVQNTMQEIVEENQKLTLD-QFNQYTQHKNDTTRRY 65
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
++FG++ L RP A+ M P ARL+ +TY+A + + ++ +V V+ +
Sbjct: 66 EIQFGQIYLSRPTM--TEADGSVSPMFPHEARLRNLTYSAPIYIDMKKRVL----VQVED 119
Query: 177 FKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWM------KEAEKGDCDFDHGGYF 229
+TG + G++P+M+ S C + + +E +C FD GGYF
Sbjct: 120 DETGDLIWVPEFDEEHDETTKVWIGKVPIMLKSTFCNLNNVDSARLSELNECPFDQGGYF 179
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-------------LNKRNRLILKLV 275
+I G+EK +AQE+L +++ + + Y++ + + ++ +
Sbjct: 180 IINGSEKVLIAQERLAANHVYIFAKAEPSPVSYQAEIRSAMEKGGKTVSSMQIKMFRRPQ 239
Query: 276 GNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
GN++ + + ++ ++ E+P+ I+F +LG+ D+EI++ I + +D+Q+ ++
Sbjct: 240 GNAQADTMR-----ATIPYIKNEIPIIIVFRALGIVPDREILEHICFDFDDSQMLDLLKP 294
Query: 336 SIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKA 391
I +A D+ + G+ K I+Y +E L ++ +KA
Sbjct: 295 CIEEAFVVQDQNVALDFIGRRGTTTGLSKDKRIRYAKDILQKEMLP-HVATNEGSETKKA 353
Query: 392 RFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRD 451
F YM+ L+LA RR+ D+RD F KR ++ F K + + +Q+
Sbjct: 354 YFFGYMIHRLMLARLERRELDDRDHFGKKRLDLGGPLLASLFRMLFRKLTKDVYRYMQKC 413
Query: 452 LNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAE 511
+ ++ + + A+ ITNGL+ + +TG W K ++ +GV L R T++
Sbjct: 414 VETHKEFN-LNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSH 472
Query: 512 LRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIF 571
LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ VST S +
Sbjct: 473 LRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMANVSTGSSSAPI 532
Query: 572 PQLL-DCGMEEL 582
L + GMEEL
Sbjct: 533 QDFLQEWGMEEL 544
>F2S646_TRIT1 (tr|F2S646) DNA-directed RNA polymerase OS=Trichophyton tonsurans
(strain CBS 112818) GN=TESG_06405 PE=3 SV=1
Length = 1258
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 265/590 (44%), Gaps = 61/590 (10%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYEAEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 70 PPSDDEPDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLG 127
Query: 162 VEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRL 202
+ ++ + R ++ + G++
Sbjct: 128 ISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFIGKM 187
Query: 203 PVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKL 249
P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 188 PIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKA 246
Query: 250 WVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWIL 304
S TP A ++ K +R++ +KL+ + G + S ++ ++P+ ++
Sbjct: 247 PPSPTPYVAEIRSAVEKGSRILSQLSIKLLSKGDSAKGGFGPTIRSTLPYIKTDIPIVVV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYM 357
F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 307 FRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPMSMN 366
Query: 358 EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+E K ++Y +E L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 367 QE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF 423
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNG 473
KR +V F K + K +QR + R + YL+ AS +T G
Sbjct: 424 GKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTLTGG 478
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 479 LKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHN 538
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 539 THWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>F2STE4_TRIRC (tr|F2STE4) DNA-directed RNA polymerase OS=Trichophyton rubrum
(strain ATCC MYA-4607 / CBS 118892) GN=TERG_05742 PE=3
SV=1
Length = 1258
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 264/590 (44%), Gaps = 61/590 (10%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYEAEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 70 PPSDDEPDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLG 127
Query: 162 VEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRL 202
+ ++ + R ++ + G++
Sbjct: 128 ISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFIGKM 187
Query: 203 PVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKL 249
P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 188 PIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKA 246
Query: 250 WVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWIL 304
S TP A ++ K +R++ +KL + G + S ++ ++P+ ++
Sbjct: 247 PPSPTPYVAEIRSAVEKGSRILSQLSIKLFSKGDSAKGGFGPTIRSTLPYIKTDIPIVVV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYM 357
F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 307 FRALGVVSDEDILNHICYDRNDTSMLEMLKPCIEEGFVIQDREVALDFISKRGSSPMSMN 366
Query: 358 EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+E K ++Y +E L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 367 QE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF 423
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNG 473
KR +V F K + K +QR + R + YL+ AS +T G
Sbjct: 424 GKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTLTGG 478
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 479 LKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHN 538
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 539 THWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>J7RV95_KAZNA (tr|J7RV95) DNA-directed RNA polymerase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC
22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)
GN=KNAG0B03910 PE=3 SV=1
Length = 1220
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 255/549 (46%), Gaps = 45/549 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 33 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSRLILEQLAQHTTEADNISRKYE-ISFGKI 91
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKV--RSDKFKTGK 181
+ +P ++ + P+ +RL+ +TY++ + V V+ + + V R K++
Sbjct: 92 YVTKPMV--NESDGVTHALYPQESRLRNLTYSSGLFVDVKKRTYEAIDVPGRDLKYELIA 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAE 235
E+ GRLP+M+ S C++ +A + D C FD GGYF+I G+E
Sbjct: 150 EE----SEDDSERGKVFIGRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSE 205
Query: 236 KAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEK 288
K +AQE Q+F KK S A +L K +R I L E ++
Sbjct: 206 KVLIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSSRT 264
Query: 289 V-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DE 342
+ ++ ++ ++P+ I+F +LGV D EI++ I Y D Q+ + + D E
Sbjct: 265 IKATLPYIKQDIPIVIIFRALGVIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRE 324
Query: 343 KCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAY 396
F R+G AL +E K IQY ++ L P + L +RKA FL Y
Sbjct: 325 TALDFIGRRG-TALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGY 376
Query: 397 MVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDR 456
M+ LLL R+ D+RD F KR K F K + + +QR +
Sbjct: 377 MINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKLTKDIFRYMQRTVEEAH 436
Query: 457 DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTR 516
D ++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 437 DFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTN 495
Query: 517 QQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLL 575
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L
Sbjct: 496 TPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSSISVGTDPMPIITFLS 555
Query: 576 DCGMEELVD 584
+ G+E L D
Sbjct: 556 EWGLEPLED 564
>I2GV93_TETBL (tr|I2GV93) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0A02460 PE=3 SV=1
Length = 1236
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 254/553 (45%), Gaps = 53/553 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 41 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 99
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFK----- 178
+ +P ++ + P+ ARL+ +TY++ + V V+ + + + K
Sbjct: 100 YVTKPMV--NESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTHEAIDMPGRELKYSLIA 157
Query: 179 -TGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLI 231
+ED+ GRLP+M+ S C++ +A + D C FD GGYF+I
Sbjct: 158 EESEEDFDAGKVFI--------GRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFII 209
Query: 232 KGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
G+EK +AQE Q+F KK S A +L K +R I L E +
Sbjct: 210 NGSEKVLIAQERSAGNIVQVF-KKAAPSPISHIAEIRSALEKGSRFISTLQVKLYGREGS 268
Query: 285 NGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA--- 340
+ + ++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D
Sbjct: 269 SSRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVI 328
Query: 341 --DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKAR 392
E F R+G AL +E K IQY + L P + L +RKA
Sbjct: 329 QDRETALDFIGRRG-TALGIKKE--KRIQY-----ARDILQKEFLPHITQLEGFESRKAF 380
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
FL YM+ LLL R+ D+RD F KR K F + + + +QR +
Sbjct: 381 FLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDIFRYMQRTV 440
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
+D ++ ++A IT+GL+ A +TG W K + +GV L R T++ L
Sbjct: 441 EEAKDFN-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHL 499
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIF 571
RRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I
Sbjct: 500 RRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPII 559
Query: 572 PQLLDCGMEELVD 584
L + GME L D
Sbjct: 560 TFLSEWGMEPLED 572
>G3ADV4_SPAPN (tr|G3ADV4) DNA-directed RNA polymerase OS=Spathaspora passalidarum
(strain NRRL Y-27907 / 11-Y1) GN=RPB2 PE=3 SV=1
Length = 1238
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 258/554 (46%), Gaps = 39/554 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF E GLVS Q++S+++FI +Q L + + + D+E+ +Y
Sbjct: 31 CWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQHTSESDHENRRYE 90
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+ FGK+ + +P G M P+ ARL+ +TY++ + V + +VF K +K
Sbjct: 91 -ITFGKIYISKPSQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKKVF---KSDDNK 144
Query: 177 FKTGKE-DYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEA------EKGDCDFDHGGY 228
K E D+ G++P+M+ S C +++ E +C +D GGY
Sbjct: 145 RKENNELDWIEEKVEDEDPRTKVYLGKVPIMLRSKFCMLRDLGEHDFYELKECPYDMGGY 204
Query: 229 FLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGN 277
F+I G+EK +AQE Q+F KK S A ++ K +RLI +KL G
Sbjct: 205 FVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSMQIKLYGR 263
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ + ++ ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+ + +
Sbjct: 264 DE-KGVSARTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQMLEMLKPCV 322
Query: 338 RDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKA 391
+ E F + L E K IQY +E L N+ G RKA
Sbjct: 323 EEGFVIQEREVALDFIGRRGVLGIRRE--KRIQYAKDILQKELLPNITQEEGFE--TRKA 378
Query: 392 RFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRD 451
FL YMV LLL R++ D+RD F KR ++ F K + +QR
Sbjct: 379 FFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTKDIYNYMQRC 438
Query: 452 LNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAE 511
+ D++ + + + IT+GL+ + +TG W K + +GV L R T++
Sbjct: 439 VENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSH 497
Query: 512 LRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESI 570
LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S SE I
Sbjct: 498 LRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCISVGTPSEPI 557
Query: 571 FPQLLDCGMEELVD 584
L + GME L D
Sbjct: 558 LYFLEEWGMESLED 571
>G2X5X0_VERDV (tr|G2X5X0) DNA-directed RNA polymerase OS=Verticillium dahliae
(strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)
GN=VDAG_05625 PE=3 SV=1
Length = 1260
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 251/581 (43%), Gaps = 67/581 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD GLVS Q++S+++F + +Q D + + + S +
Sbjct: 26 CWTVISSFFDSKGLVSQQVDSFDEFTTSTVQELIDEYSHITLDQPNPASDSDRAIALRRY 85
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAA--------KMKVTVEVQVFT 168
VKFG V + RP A+ + +LP R + +TYA+ K+ + VE Q+
Sbjct: 86 EVKFGTVMVSRPSIT--EADGKVSTLLPYECRDRNLTYASPLYVRITKKVSIAVENQIPL 143
Query: 169 -----------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLC 211
P ++ ++ ++G + GR+P+MV S +C
Sbjct: 144 NELDDEQHDEMARTGEHPTRLEWEEEESGDDPGADKDKPEDMKDMIFIGRMPIMVKSKIC 203
Query: 212 WMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWA 258
+ + D C +D GGYF+I G+EK +AQE Q+F KK S A
Sbjct: 204 HLSRESENDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPFSYTA 262
Query: 259 IGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDK 314
+L K +RLI LKL S + ++ ++ V++P+ I+F + G+ SD+
Sbjct: 263 EIRSALEKGSRLISSLMLKLHSTSPAKGGVGQTIHCTLPYVKVDIPIGIVFRAFGIVSDE 322
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVKGIQY 366
+I++ I Y DTQ+ + I +A D + G R N E+ V+
Sbjct: 323 DILNHICYDRNDTQMLEMLRPCIEEAFIVQDRNVALDWIGKRGNSNHTMTREKRVR---- 378
Query: 367 PPSESMEECLNLYLFPGSS----GLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
S +E L P S RKA FL YM LL GRR D+RD F KR
Sbjct: 379 ----SAKEILQKETLPHISQSEGSETRKAFFLGYMTHKLLQCALGRRDIDDRDHFGKKRL 434
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ + +S L+R + +R + + ++NGL+ + +TG
Sbjct: 435 DLAGPLLAKLFRTIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGN 493
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 494 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 553
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNLS+ VS +E I ++ GME L
Sbjct: 554 ETPEGQACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 594
>J9EEU9_9SPIT (tr|J9EEU9) DNA-directed RNA polymerase OS=Oxytricha trifallax
GN=OXYTRI_15296 PE=3 SV=1
Length = 1198
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 257/566 (45%), Gaps = 40/566 (7%)
Query: 62 RMFFDEHGLVSHQINSYNQFIAAGLQAAFDAF--GDLNVTPSYDPSKKGDN-EHFKYATV 118
R +F +HGLVS QI+S+N+F+ +Q + V P Y PS+ D+ + Y V
Sbjct: 34 RSYFKQHGLVSQQISSFNRFLEMNVQEIVKEHKHNRIKVEPQYLPSEGRDSTQENIYYDV 93
Query: 119 KFGKVTLDR-PKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKF 177
F +V ++ P+ + Q + P AR++ +TYA ++ V V++Q
Sbjct: 94 IFEQVHVNNSPRIQESDESYQ--AVFPHEARIRNLTYATEIYVDVKLQKLQQIPYDKTGL 151
Query: 178 KTG-KEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAE-------KGDCDFDHGGYF 229
+ G K + G++PVMV S C ++ + +C +D GGYF
Sbjct: 152 RDGEKREPKFTILEDSKPIQTFLGKVPVMVRSKFCHLRNLQDHEIVRNAKECLYDQGGYF 211
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
+I G EK +AQE++ + V + W +S + + + + E+I
Sbjct: 212 VINGGEKVIIAQERMANNIVLVFHRRPPSKYSWVAEIRSQAENSNKPPQQFMVAIQEKIK 271
Query: 285 NGEK---------VLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFG 335
GE+ ++ + +PV IL +LG SDK+II+ I Y ED+++
Sbjct: 272 LGEQGGGNYARTICATIPAIREPIPVAILMRALGCVSDKQIINKICYDPEDSEMCE---- 327
Query: 336 SIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFP----GSSGLN 388
S++ + E+ ++AL ++ + G QY + ++ L P + GL
Sbjct: 328 SLKPSLEQAMTVMTEEDALDFISKRGSGAQYSRDTRIQYAQKILETEFLPHVSMNAEGLY 387
Query: 389 RKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKAL 448
+K+ F+ YMV L+ A GR D+RD + KR + F M K L
Sbjct: 388 KKSYFVGYMVNRLIQASLGRTSEDDRDYYGKKRMDMAGSLLSGLFRQLFRQTTDDMLKYL 447
Query: 449 QRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQT 508
+RD++ + + + + + I+ GL+ A +TG W + + +GV L R +
Sbjct: 448 KRDIDNGKQILSLASAIKSDTISRGLKSALATGNWGKDKQGDVQKTGVAQVLNRLTFASS 507
Query: 509 MAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE 568
++ LRR + +GK+ R H SHWG VC TP+G+ CGLVKNLS+ LVS
Sbjct: 508 LSHLRRLNTPLAKSGKLTKPRQLHNSHWGMVCPAETPEGQACGLVKNLSLMSLVSVGSPN 567
Query: 569 SIFPQLL-DCGMEELVDDTTTFLSKK 593
++L D G+E+L L K
Sbjct: 568 KTLIEILEDFGVEDLTSLDPIILQNK 593
>C5FJF0_ARTOC (tr|C5FJF0) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_02390 PE=3 SV=1
Length = 1258
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 264/593 (44%), Gaps = 67/593 (11%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYEAEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSKKGDNEH----FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM 158
P GD+E + +KFG V L RP G + MLP+ ARL+ +TYA+ +
Sbjct: 70 PP---GDDEQDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPL 124
Query: 159 KVTVEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXX 199
+ + ++ + R + +
Sbjct: 125 YLGISKKIMEGRERLLSERDDEEEEVEEKGDEERRSRGTYLHWERKPTLEDEAEEENIFI 184
Query: 200 GRLPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFL 246
G++P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F
Sbjct: 185 GKMPIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF- 243
Query: 247 KKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPV 301
KK S TP A ++ K +R++ +KL + G + S ++ ++P+
Sbjct: 244 KKAPPSPTPYVAEIRSAVEKGSRILSQLSIKLFAKGDSAKGGFGPTIRSTLPYIKTDIPI 303
Query: 302 WILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNAL 354
++F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 304 VVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPM 363
Query: 355 HYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNR 414
+E K ++Y +E L ++ RKA FL YMV LL GRR D+R
Sbjct: 364 SMNQE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDR 420
Query: 415 DDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASII 470
D F KR +V F K + K +QR + R + YL+ AS +
Sbjct: 421 DHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTL 475
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
T GL+ A +TG W K +GV L R T++ LRRT + GK+ R
Sbjct: 476 TGGLKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQ 535
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
H +HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 536 LHNTHWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>D4CZ65_TRIVH (tr|D4CZ65) DNA-directed RNA polymerase OS=Trichophyton verrucosum
(strain HKI 0517) GN=TRV_00102 PE=3 SV=1
Length = 1205
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 264/590 (44%), Gaps = 61/590 (10%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYETEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 70 PPSDDEPDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLG 127
Query: 162 VEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRL 202
+ ++ + R ++ + G++
Sbjct: 128 ISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFIGKM 187
Query: 203 PVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKL 249
P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 188 PIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKA 246
Query: 250 WVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWIL 304
S TP A ++ K +R++ +KL + G + S ++ ++P+ ++
Sbjct: 247 PPSPTPYVAEIRSAVEKGSRILSQLSIKLFSKGDSAKGGFGPTIRSTLPYIKTDIPIVVV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYM 357
F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 307 FRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPMSMN 366
Query: 358 EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+E K ++Y +E L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 367 QE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF 423
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNG 473
KR +V F K + K +QR + R + YL+ AS +T G
Sbjct: 424 GKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTLTGG 478
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 479 LKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHN 538
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 539 THWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>C9SGY6_VERA1 (tr|C9SGY6) DNA-directed RNA polymerase OS=Verticillium albo-atrum
(strain VaMs.102 / ATCC MYA-4576 / FGSC 10136)
GN=VDBG_04315 PE=3 SV=1
Length = 1260
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 251/581 (43%), Gaps = 67/581 (11%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FFD GLVS Q++S+++F + +Q D + + + S +
Sbjct: 26 CWTVISSFFDSKGLVSQQVDSFDEFTTSTVQELIDEYSHITLDQPNPASDSDRAIALRRY 85
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAA--------KMKVTVEVQVFT 168
VKFG V + RP A+ + +LP R + +TYA+ K+ + VE Q+
Sbjct: 86 EVKFGTVMVSRPSIT--EADGKVSTLLPYECRDRNLTYASPLYVRITKKVSIAVENQIPL 143
Query: 169 -----------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLC 211
P ++ ++ ++G + GR+P+MV S +C
Sbjct: 144 NELDDEQHDEMGRTGEHPTRLEWEEEESGDDPGADKDKPEDMKDMIFIGRMPIMVKSKIC 203
Query: 212 WMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWA 258
+ + D C +D GGYF+I G+EK +AQE Q+F KK S A
Sbjct: 204 HLSRESENDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPFSYTA 262
Query: 259 IGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDK 314
+L K +RLI LKL S + ++ ++ V++P+ I+F + G+ SD+
Sbjct: 263 EIRSALEKGSRLISSLMLKLHSKSPAKGGVGQTIHCTLPYVKVDIPIGIVFRAFGIVSDE 322
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVKGIQY 366
+I++ I Y DTQ+ + I +A D + G R N E+ V+
Sbjct: 323 DILNHICYDRNDTQMLEMLRPCIEEAFIVQDRNVALDWIGKRGNSNHTMTREKRVR---- 378
Query: 367 PPSESMEECLNLYLFPGSS----GLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
S +E L P S RKA FL YM LL GRR D+RD F KR
Sbjct: 379 ----SAKEILQKETLPHISQSEGSETRKAFFLGYMTHKLLQCALGRRDIDDRDHFGKKRL 434
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ + +S L+R + +R + + ++NGL+ + +TG
Sbjct: 435 DLAGPLLAKLFRTIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGN 493
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 494 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPA 553
Query: 543 STPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
TP+G+ CGLVKNLS+ VS +E I ++ GME L
Sbjct: 554 ETPEGQACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 594
>J4IBC9_FIBRA (tr|J4IBC9) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_06621 PE=3 SV=1
Length = 1226
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/573 (27%), Positives = 266/573 (46%), Gaps = 66/573 (11%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + + C FF++ GLV Q++S+++F+ +Q D DL + S D D
Sbjct: 29 ETITQEDCWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENADLILDQS-DQHTGHD 87
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT- 168
+ + +KFG++ L RP A+ + P+ ARL+ +TY+A + + ++ +V
Sbjct: 88 GDVNRRYEIKFGQIYLSRPTV--TEADGSVAPVFPQEARLRNLTYSAPLYIEMKKRVLVG 145
Query: 169 ---PHKVRSD-----KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD 220
P + D + + ED G++P+M+ S C + D
Sbjct: 146 REDPDSLTGDMTWEPEHEENPED----------TRKVWIGKVPIMLRSSFCILHGLVDED 195
Query: 221 ------CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNKR-- 267
C FD GGYF+I G+EK +AQE++ ++V + + +S +R
Sbjct: 196 VYDLNECPFDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPISFLAEIRSAVERGG 255
Query: 268 ---NRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGN 324
++ +KL ++ + N K ++ ++ V++P+W++F +LGV SD++I++ I Y
Sbjct: 256 KTISQFQVKLFHRNQERSLGNVMKA-TIPYIRVDIPIWVVFRALGVISDRDILEHICYDM 314
Query: 325 EDTQIQNIFFGSIRDA----DEKCS-------GFRKGKNA---LHYMEEHVKGIQYPPSE 370
+D Q+ + I D D + + G G N L Y +E ++ + P
Sbjct: 315 QDAQMLEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQK-EMLPHV 373
Query: 371 SMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXX 430
SM E GS ++KA F YM+ LLLA RR D+RD F KR
Sbjct: 374 SMAE--------GSE--SKKAYFFGYMIHRLLLAAMERRDLDDRDHFGKKRLDLAGPLLA 423
Query: 431 XXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRL 490
++ F K + + LQ+ + ++ + + + ITNGL+ + +TG W K +
Sbjct: 424 NLFRMLFRKLTKDVYRYLQKCVETHKEFN-LNLAVKHNTITNGLKYSLATGNWGDQKKSM 482
Query: 491 ERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENC 550
+GV L R T++ LRR + GK+ R H +HWG VC TP+G+ C
Sbjct: 483 ASKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQAC 542
Query: 551 GLVKNLSVTGLVST-NISESIFPQLLDCGMEEL 582
GLVKNLS+ +S ++S + L + G+E L
Sbjct: 543 GLVKNLSLMSCISVGSLSAPVIEFLEEWGLESL 575
>D4APE8_ARTBC (tr|D4APE8) DNA-directed RNA polymerase OS=Arthroderma benhamiae
(strain ATCC MYA-4681 / CBS 112371) GN=ARB_06116 PE=3
SV=1
Length = 1205
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 264/590 (44%), Gaps = 61/590 (10%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYEAEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 70 PPSDDEPDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLG 127
Query: 162 VEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRL 202
+ ++ + R ++ + G++
Sbjct: 128 ISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFIGKM 187
Query: 203 PVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKL 249
P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 188 PIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKA 246
Query: 250 WVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWIL 304
S TP A ++ K +R++ +KL + G + S ++ ++P+ ++
Sbjct: 247 PPSPTPYVAEIRSAVEKGSRILSQLSIKLFSKGDSAKGGFGPTIRSTLPYIKTDIPIVVV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYM 357
F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 307 FRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPMSMN 366
Query: 358 EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+E K ++Y +E L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 367 QE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF 423
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNG 473
KR +V F K + K +QR + R + YL+ AS +T G
Sbjct: 424 GKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTLTGG 478
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 479 LKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHN 538
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 539 THWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>F2Q3J3_TRIEC (tr|F2Q3J3) DNA-directed RNA polymerase OS=Trichophyton equinum
(strain ATCC MYA-4606 / CBS 127.97) GN=TEQG_07670 PE=3
SV=1
Length = 1258
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 264/590 (44%), Gaps = 61/590 (10%)
Query: 43 EILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSY 102
++ E E + C FF+ GLVS Q++S+++FI+ +Q + G + + +
Sbjct: 10 DVYYEAEEGITSEDCWTVISAFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTV 69
Query: 103 DPSK-KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVT 161
PS + D + +KFG V L RP G + MLP+ ARL+ +TYA+ + +
Sbjct: 70 PPSDDEPDPVVLRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLG 127
Query: 162 VEVQVFTPHK-------------------VRSDKFKTGKEDYXXXXXXXXXXXXXXXGRL 202
+ ++ + R ++ + G++
Sbjct: 128 ISKKIMEGRERLLSERDEEEEEIEEKGDEERRNRGTYLHWERKPTMEDEAEEENIFIGKM 187
Query: 203 PVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKL 249
P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE Q+F KK
Sbjct: 188 PIMLKSKYCILKDLGEQALYNWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF-KKA 246
Query: 250 WVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWIL 304
S TP A ++ K +R++ +KL + G + S ++ ++P+ ++
Sbjct: 247 PPSPTPYVAEIRSAVEKGSRILSQLSIKLFSKGDSAKGGFGPTIRSTLPYIKTDIPIVVV 306
Query: 305 FFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYM 357
F +LGV SD++I++ I Y DT + + I + E F ++G + +
Sbjct: 307 FRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGSSPMSMN 366
Query: 358 EEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDF 417
+E K ++Y +E L ++ RKA FL YMV LL GRR D+RD F
Sbjct: 367 QE--KRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF 423
Query: 418 RNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLD----ASIITNG 473
KR +V F K + K +QR + R + YL+ AS +T G
Sbjct: 424 GKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETGRQL-----YLNIGVKASTLTGG 478
Query: 474 LQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHP 533
L+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 479 LKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHN 538
Query: 534 SHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 539 THWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVL 588
>F8PFZ4_SERL3 (tr|F8PFZ4) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_101102 PE=3 SV=1
Length = 1209
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 262/554 (47%), Gaps = 36/554 (6%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF++ GLV Q++S+++F+ +Q D DL + D +++ +
Sbjct: 16 CWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENADL-ILDQADQHTGHESDMTRRY 74
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+KFG++ L RP A+ + P+ ARL+ +TY+A + + ++ +V H SD
Sbjct: 75 EIKFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMKKRVLIGH---SDP 129
Query: 177 FKTGKEDY---XXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGG 227
G+ D G++P+M+ S C ++ + D C +D GG
Sbjct: 130 -NGGQGDILWDAEHEESPEDTTKVWIGKVPIMLRSTFCILRGLQDQDLYDLNECPYDSGG 188
Query: 228 YFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI----LKLVGN 277
YF+I G+EK +AQE++ ++V + I + ++ K + I +K+
Sbjct: 189 YFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQFQVKMFHR 248
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
++ + N K ++ ++ V++P+W++F +LGV SD++I++ I Y +D Q+ + I
Sbjct: 249 NQERSLGNVMKA-TIPYIKVDIPIWVVFRALGVISDRDILEHICYDMQDAQMLEMLKPCI 307
Query: 338 RDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKAR 392
D D + + G + I+Y +E L ++ + GS ++KA
Sbjct: 308 DDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSE--SKKAY 365
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
F YM+ LLLA RR+ D+RD F KR ++ F + + + LQ+ +
Sbjct: 366 FFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCV 425
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
++ + + ITNGL+ + +TG W K + +GV L R T++ L
Sbjct: 426 ETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYASTLSHL 484
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIF 571
RR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S + S +
Sbjct: 485 RRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISVGSYSAPVI 544
Query: 572 PQLLDCGMEELVDD 585
L + G+E L ++
Sbjct: 545 EFLEEWGLESLEEN 558
>F8NF62_SERL9 (tr|F8NF62) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_491686 PE=3 SV=1
Length = 1209
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 262/554 (47%), Gaps = 36/554 (6%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF++ GLV Q++S+++F+ +Q D DL + D +++ +
Sbjct: 16 CWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENADL-ILDQADQHTGHESDMTRRY 74
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDK 176
+KFG++ L RP A+ + P+ ARL+ +TY+A + + ++ +V H SD
Sbjct: 75 EIKFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMKKRVLIGH---SDP 129
Query: 177 FKTGKEDY---XXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGG 227
G+ D G++P+M+ S C ++ + D C +D GG
Sbjct: 130 -NGGQGDILWDAEHEESPEDTTKVWIGKVPIMLRSTFCILRGLQDQDLYDLNECPYDSGG 188
Query: 228 YFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI----LKLVGN 277
YF+I G+EK +AQE++ ++V + I + ++ K + I +K+
Sbjct: 189 YFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQFQVKMFHR 248
Query: 278 SKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
++ + N K ++ ++ V++P+W++F +LGV SD++I++ I Y +D Q+ + I
Sbjct: 249 NQERSLGNVMKA-TIPYIKVDIPIWVVFRALGVISDRDILEHICYDMQDAQMLEMLKPCI 307
Query: 338 RDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKAR 392
D D + + G + I+Y +E L ++ + GS ++KA
Sbjct: 308 DDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQEILQKEMLPHVSMAEGSE--SKKAY 365
Query: 393 FLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDL 452
F YM+ LLLA RR+ D+RD F KR ++ F + + + LQ+ +
Sbjct: 366 FFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTRDVYRYLQKCV 425
Query: 453 NGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAEL 512
++ + + ITNGL+ + +TG W K + +GV L R T++ L
Sbjct: 426 ETHKEFN-LSLAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYTYASTLSHL 484
Query: 513 RRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIF 571
RR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S + S +
Sbjct: 485 RRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISVGSYSAPVI 544
Query: 572 PQLLDCGMEELVDD 585
L + G+E L ++
Sbjct: 545 EFLEEWGLESLEEN 558
>G1XR81_ARTOA (tr|G1XR81) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00193g80 PE=3 SV=1
Length = 1258
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 250/566 (44%), Gaps = 73/566 (12%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV---TPSYDPSKKGDNEHF 113
C FFD GLVS QI+S+++F++ +Q D L + TPS D +
Sbjct: 21 CWTVISSFFDAKGLVSQQIDSFDEFVSTTMQELIDEDNQLVLDHNTPSND-----EGIAL 75
Query: 114 KYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHK-- 171
+ +KFG V L RP F G + Q M P+ ARL+ +TYA+ + + + +V +
Sbjct: 76 RRFEIKFGNVLLSRPTFTEGDGSTQ--VMQPQEARLRNLTYASPLYLQMSQKVMVAREKS 133
Query: 172 -------------VRSDKFKTGKEDY--------------XXXXXXXXXXXXXXXGRLPV 204
+ K K+D+ G++P+
Sbjct: 134 MAEKEEDEDEDMDDAEEGEKKEKQDFHWQVIGDTTEEVGDDDDDIDTSNHTRVFIGKIPI 193
Query: 205 MVMSDLCWMKE-AEKG-----DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWV 251
M+ S C +KE E G +C +D GGYF+I G+EK +AQE Q F KK
Sbjct: 194 MLKSQYCVLKEFNEDGLYGLNECPYDQGGYFVINGSEKVLIAQERSAANIVQCF-KKAAP 252
Query: 252 SNTPDWAIGYKSLNKRNRLILKLV--------GNSKFEEINNGEKVLSVY-FLGVEVPVW 302
S A +L K +RLI L G + F G + S ++ +VP+
Sbjct: 253 SPISYIAEIRSALEKGSRLISSLTIKLMAKGEGRTGF-----GRTIRSTLPYIKTDVPIA 307
Query: 303 ILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYME 358
++F +LGV SD++I++ + Y DT + + I +A D + + GK
Sbjct: 308 VVFRALGVVSDEDILNRVCYDRNDTAMLEMLKPCIEEAFVIQDREVALDFIGKRGSAQGI 367
Query: 359 EHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFR 418
K I+Y E M++ L ++ RKA FL YMV +L RR+ D+RD F
Sbjct: 368 NRDKRIKYA-KEIMQKELLPHISQAEGHETRKAFFLGYMVHKMLQCALERRETDDRDHFG 426
Query: 419 NKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAF 478
KR ++ F K + K LQ+ + RD + + ++ ITNGL+ +
Sbjct: 427 RKRLDLAGPLLANLFRMLFKKLVKDVFKYLQKCVESGRDFN-VTLAIKSNTITNGLKYSL 485
Query: 479 STGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGK 538
+TG W K +GV L R T++ LRRT + GK+ R H +HWG
Sbjct: 486 ATGNWGDQKKPASAKAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL 545
Query: 539 VCFLSTPDGENCGLVKNLSVTGLVST 564
VC TP+G+ CGLVKNLS+ ++
Sbjct: 546 VCPAETPEGQACGLVKNLSLMSYITV 571
>C4JKI6_UNCRE (tr|C4JKI6) DNA-directed RNA polymerase II 138 kDa polypeptide
OS=Uncinocarpus reesii (strain UAMH 1704) GN=UREG_02143
PE=3 SV=1
Length = 884
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 261/591 (44%), Gaps = 78/591 (13%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKG- 108
E + C FF+ GLVS Q++S+++FI+ +Q + G + + + P +
Sbjct: 18 EGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTIAPEEDDP 77
Query: 109 DNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV-- 166
D + +KFG V L RP G + MLP+ ARL+ +TYA+ + + + +V
Sbjct: 78 DPVLVRRYELKFGTVMLARPSMTEG--DGATSIMLPQEARLRNLTYASPLYLGITKKVAE 135
Query: 167 -------------------------------FTPHKVRSDKFKTGKEDYXXXXXXXXXXX 195
+ P + D+ G+E+
Sbjct: 136 GRERSLAERDEDEEPEEKGDEERRARGTYLQWAPRALPEDE--EGEENIFI--------- 184
Query: 196 XXXXGRLPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE------- 242
G++P+M+ S C +K+ + +C +D GGYF+I G+EK +AQE
Sbjct: 185 ----GKMPIMLKSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIV 240
Query: 243 QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKVLSVY-FLGV 297
Q+F KK S TP A ++ K +R++ +KL + G + S ++
Sbjct: 241 QVF-KKAPPSPTPFVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKT 299
Query: 298 EVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKCSGFRKGKN 352
++P+ ++F +LGV SD++I++ I Y DT + + I + E F +
Sbjct: 300 DIPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRG 359
Query: 353 ALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCD 412
+ H K ++Y +E L ++ RKA FL YMV LL GRR D
Sbjct: 360 SSPTSMNHEKRVRYARDIIQKEFLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDVD 418
Query: 413 NRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITN 472
+RD F KR +V F K + K +QR + +R + ++ + AS +T
Sbjct: 419 DRDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLY-LKIGVKASTLTG 477
Query: 473 GLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPH 532
GL+ A +TG W K +GV L R T++ LRRT + GK+ R H
Sbjct: 478 GLKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLH 537
Query: 533 PSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
+HWG VC TP+G+ CGLVKNL++ ++ SE I ++ ME L
Sbjct: 538 NTHWGLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVL 588
>N4V473_COLOR (tr|N4V473) DNA-directed RNA polymerase ii subunit rpb2
OS=Colletotrichum orbiculare (strain 104-T / ATCC 96160
/ CBS 514.97 / LARS 414 / MAFF 240422) GN=Cob_08568 PE=4
SV=1
Length = 1260
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 260/575 (45%), Gaps = 55/575 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNE-HFKY 115
C FF+ GLVS Q++S+++F ++ +Q D + + + +P +GD +
Sbjct: 26 CWTVISSFFESKGLVSQQVDSFDEFTSSTVQELIDEYSQITLDQP-NPMSEGDKVIALRR 84
Query: 116 ATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKV- 172
VKFG V + RP A+ + +LP R + +TYA+ + K+T V + ++
Sbjct: 85 YEVKFGTVMVSRPSIT--EADGKVTTLLPYECRDRNLTYASPLYVKITKRVSIAVEKRIP 142
Query: 173 --------RSDKFKTGKE-------------DYXXXXXXXXXXXXXX-XGRLPVMVMSDL 210
+ + TG+ DY GR+P+MV S +
Sbjct: 143 LNELDEEQQEEMSSTGEHPTKLEWEEEESGEDYGADKNKSDDMKDMIFIGRMPIMVKSKI 202
Query: 211 CWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDW 257
C + ++ D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 203 CHLSNEQEDDLFMLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKAQPSPYSYT 261
Query: 258 AIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSS 312
A +L K +RLI LKL + G+ + S+ ++ ++P+ I+F +LGV S
Sbjct: 262 AEIRSALEKGSRLISSMMLKLYSKGDAAKGGYGQTIHCSLPYVKSDLPIAIVFRALGVVS 321
Query: 313 DKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPP 368
D++I++ I Y D+Q+ + I +A D + + GK ++ K ++
Sbjct: 322 DEDILNHICYDRNDSQMLEMLRPCIEEAFCIQDREVALDFIGKRGSNHNIPREKRVRTAK 381
Query: 369 SESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXX 428
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 382 DILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDTDDRDHFGKKRLDLAGPL 440
Query: 429 XXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYK 488
+ + +S L+R + +R + + ++NGL+ + +TG W K
Sbjct: 441 LAKLFRNIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGNWGDQKK 499
Query: 489 RLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 548
+ T+GV L R T++ LRRT + GK+ R H +HWG VC TP+G+
Sbjct: 500 AMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQ 559
Query: 549 NCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
CGLVKNLS+ VS +E I ++ GME L
Sbjct: 560 ACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 594
>G4V0S0_NEUT9 (tr|G4V0S0) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_95517 PE=3
SV=1
Length = 1287
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 269/584 (46%), Gaps = 84/584 (14%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH----FKYATVK 119
+FD GLVS QI+S+N+F +Q+ D + DL + D GD+E + V
Sbjct: 55 YFDLKGLVSQQIDSFNEFTTDTVQSLIDEYADLTL----DHPSPGDDEGREIILRRYDVH 110
Query: 120 FGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRSDKF 177
FG++ + RP A + +LP R + +TY+A + KVT ++ K ++
Sbjct: 111 FGEIIISRPTLT--EATGETISLLPYECRDRNLTYSAPIYCKVTKRARIAVSEKKPLNQL 168
Query: 178 KTGKEDYXXXXXXXXXXXX-------------------------XXXGRLPVMVMSDLC- 211
+ D+ G++P+MV S +C
Sbjct: 169 TDDEHDHMARTGEHPTALRWIEEESAPPEPPKDDKINPENLKGYLFLGKIPIMVKSKICH 228
Query: 212 -WMKEAEK----GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-- 263
+M++ E +C +D GGYF+I G+EK +AQE+ + V P ++ Y++
Sbjct: 229 LYMEDDESLFTLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPPGGSVSYQAEI 288
Query: 264 ---LNKRNRLI--LKLVGNSKFEEINNGEKV----LSVYFLGVEVPVWILFFSLGVSSDK 314
L K +RLI L++ ++K ++ N G +++ ++ EV + I+F +LGV SD+
Sbjct: 289 RSALEKGSRLISSLQMRLHTKADQ-NKGRLANTVSVTLPYVKEEVSLAIVFRALGVVSDE 347
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGI----QYPPSE 370
+I++ I Y D+Q+ ++R E+ + + AL Y+ + G + +
Sbjct: 348 DILNHICYDRRDSQM----LEALRPCIEEAFCIQDREVALDYIGKRGNGSTGINRNGRIK 403
Query: 371 SMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+ +E L L P S RKA FL YMV LL GRR D+RD F KR
Sbjct: 404 AAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAG 463
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFS 479
A + + + L +DL G R V +H+ + AS +TNGL+ + +
Sbjct: 464 PL--------LAKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLA 515
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K + T+GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 516 TGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLV 575
Query: 540 CFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNLS+ VS +++ I ++ ME L
Sbjct: 576 CPAETPEGQACGLVKNLSLMCFVSVGTLADPIIEFMIARNMEVL 619
>F8MVQ3_NEUT8 (tr|F8MVQ3) DNA-directed RNA polymerase OS=Neurospora tetrasperma
(strain FGSC 2508 / ATCC MYA-4615 / P0657)
GN=NEUTE1DRAFT_124967 PE=3 SV=1
Length = 1287
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 269/584 (46%), Gaps = 84/584 (14%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH----FKYATVK 119
+FD GLVS QI+S+N+F +Q+ D + DL + D GD+E + V
Sbjct: 55 YFDLKGLVSQQIDSFNEFTTDTVQSLIDEYADLTL----DHPSPGDDEGREIILRRYDVH 110
Query: 120 FGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRSDKF 177
FG++ + RP A + +LP R + +TY+A + KVT ++ K ++
Sbjct: 111 FGEIIISRPTLT--EATGETISLLPYECRDRNLTYSAPIYCKVTKRARIAVSEKKPLNQL 168
Query: 178 KTGKEDYXXXXXXXXXXXX-------------------------XXXGRLPVMVMSDLC- 211
+ D+ G++P+MV S +C
Sbjct: 169 TDDEHDHMARTGEHPTALRWIEEESAPPEPPKDDKINPENLKGYLFLGKIPIMVKSKICH 228
Query: 212 -WMKEAEK----GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-- 263
+M++ E +C +D GGYF+I G+EK +AQE+ + V P ++ Y++
Sbjct: 229 LYMEDDESLFTLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPPGGSVSYQAEI 288
Query: 264 ---LNKRNRLI--LKLVGNSKFEEINNGEKV----LSVYFLGVEVPVWILFFSLGVSSDK 314
L K +RLI L++ ++K ++ N G +++ ++ EV + I+F +LGV SD+
Sbjct: 289 RSALEKGSRLISSLQMRLHTKADQ-NKGRLANTVSVTLPYVKEEVSLAIVFRALGVVSDE 347
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGI----QYPPSE 370
+I++ I Y D+Q+ ++R E+ + + AL Y+ + G + +
Sbjct: 348 DILNHICYDRRDSQM----LEALRPCIEEAFCIQDREVALDYIGKRGNGSTGINRNGRIK 403
Query: 371 SMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+ +E L L P S RKA FL YMV LL GRR D+RD F KR
Sbjct: 404 AAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAG 463
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFS 479
A + + + L +DL G R V +H+ + AS +TNGL+ + +
Sbjct: 464 PL--------LAKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLA 515
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K + T+GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 516 TGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLV 575
Query: 540 CFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNLS+ VS +++ I ++ ME L
Sbjct: 576 CPAETPEGQACGLVKNLSLMCFVSVGTLADPIIEFMIARNMEVL 619
>G8YRX4_PICSO (tr|G8YRX4) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_000931 PE=3 SV=1
Length = 1233
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 258/564 (45%), Gaps = 46/564 (8%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF E GLVS Q++S+++FI +Q L + + + D
Sbjct: 18 ESITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQHTSEDD 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
+E+ +Y + FGK+ + +P G M P+ ARL+ +TY++ + V + +VF
Sbjct: 78 HENRRYE-IAFGKIYISKPTQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKRVF-- 132
Query: 170 HKVRSDKFKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEA------EKGDCD 222
K + K + ++ G++P+M+ S C ++ E +C
Sbjct: 133 -KSDDNNRKDNELEWIEESVENEEPQTKVYLGKVPIMLRSKFCMLRGLGEHEFYELKECP 191
Query: 223 FDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI---- 271
+D GGYF+I G+EK +AQE Q+F KK S A +L K +RLI
Sbjct: 192 YDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSALEKGSRLISSMQ 250
Query: 272 LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQ 330
+KL G ++ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 251 IKLYGRD--DKGTSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQML 308
Query: 331 NIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG-- 383
+ + + E F + L E K IQY ++ L L P
Sbjct: 309 EMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNIT 361
Query: 384 -SSGL-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHAR 441
G RKA FL YMV LLL R++ D+RD F KR ++ F
Sbjct: 362 QEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLT 421
Query: 442 KRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 501
K + +QR + D++ + + IT+GL+ + +TG W K + +GV L
Sbjct: 422 KDIYNYMQRCVENDKEFNST-LAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLN 480
Query: 502 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 481 RYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSC 540
Query: 562 VSTNI-SESIFPQLLDCGMEELVD 584
+S SE I L + GME L D
Sbjct: 541 ISVGTPSEPILYFLEEWGMEPLED 564
>G8YQG2_PICSO (tr|G8YQG2) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_000931 PE=3 SV=1
Length = 1233
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 258/564 (45%), Gaps = 46/564 (8%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF E GLVS Q++S+++FI +Q L + + + D
Sbjct: 18 ESITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQHTSEDD 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
+E+ +Y + FGK+ + +P G M P+ ARL+ +TY++ + V + +VF
Sbjct: 78 HENRRYE-IAFGKIYISKPTQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKRVF-- 132
Query: 170 HKVRSDKFKTGKEDYXXXXXXXXXXXXXX-XGRLPVMVMSDLCWMKEA------EKGDCD 222
K + K + ++ G++P+M+ S C ++ E +C
Sbjct: 133 -KSDDNNRKDNELEWIEESVENEEPQTKVYLGKVPIMLRSKFCMLRGLGEHEFYELKECP 191
Query: 223 FDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI---- 271
+D GGYF+I G+EK +AQE Q+F KK S A +L K +RLI
Sbjct: 192 YDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSALEKGSRLISSMQ 250
Query: 272 LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQ 330
+KL G ++ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 251 IKLYGRD--DKGTSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQML 308
Query: 331 NIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG-- 383
+ + + E F + L E K IQY ++ L L P
Sbjct: 309 EMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNIT 361
Query: 384 -SSGL-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHAR 441
G RKA FL YMV LLL R++ D+RD F KR ++ F
Sbjct: 362 QEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLT 421
Query: 442 KRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 501
K + +QR + D++ + + IT+GL+ + +TG W K + +GV L
Sbjct: 422 KDIYNYMQRCVENDKEFNST-LAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLN 480
Query: 502 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 481 RYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSC 540
Query: 562 VSTNI-SESIFPQLLDCGMEELVD 584
+S SE I L + GME L D
Sbjct: 541 ISVGTPSEPILYFLEEWGMEPLED 564
>E3QBS9_COLGM (tr|E3QBS9) DNA-directed RNA polymerase OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_03562 PE=3 SV=1
Length = 1259
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/577 (28%), Positives = 261/577 (45%), Gaps = 59/577 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH---F 113
C FF+ GLVS Q++S+++F ++ +Q D + + + P+ D++
Sbjct: 26 CWTVISSFFESKGLVSQQVDSFDEFTSSTVQELIDEYSQITLD---QPNPMSDSDKVIAL 82
Query: 114 KYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVEVQVF 167
+ VKFG V + RP A+ + +LP R + +TYA+ + KV++ V+
Sbjct: 83 RRYEVKFGTVMVSRPSIT--EADGKVTTLLPYECRDRNLTYASPLYVKITKKVSIAVEKP 140
Query: 168 TP-----HKVRSDKFKTGKE-------------DYXXXXXXXXXXXXXX-XGRLPVMVMS 208
P + + + TG+ DY GR+P+MV S
Sbjct: 141 IPLNELDEEQQDELANTGEHPTKLEWEEEESGEDYGADKNKSDDMKDMIFIGRMPIMVKS 200
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + ++ D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 201 KICHLSSEQEDDLFMLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKAQPSPYS 259
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI LKL + G+ + S+ ++ ++P+ I+F +LGV
Sbjct: 260 YTAEIRSALEKGSRLISSMMLKLYSKGDAAKGGYGQTIHCSLPYVKADLPIAIVFRALGV 319
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQY 366
SD++I++ I Y D+Q+ + I +A D + + GK ++ K ++
Sbjct: 320 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCIQDREVALDFIGKRGSNHNIPREKRVRT 379
Query: 367 PPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 380 AKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDTDDRDHFGKKRLDLAG 438
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHP 486
+ + +S L+R + +R + + ++NGL+ + +TG W
Sbjct: 439 PLLAKLFRNIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGNWGDQ 497
Query: 487 YKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 546
K + T+GV L R T++ LRRT + GK+ R H +HWG VC TP+
Sbjct: 498 KKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPE 557
Query: 547 GENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
G+ CGLVKNLS+ VS +E I ++ GME L
Sbjct: 558 GQACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 594
>Q872W7_NEUCS (tr|Q872W7) DNA-directed RNA polymerase OS=Neurospora crassa
GN=B23B10.320 PE=3 SV=1
Length = 1287
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 269/584 (46%), Gaps = 84/584 (14%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH----FKYATVK 119
+FD GLVS QI+S+N+F +Q+ D + DL + D GD+E + V
Sbjct: 55 YFDLKGLVSQQIDSFNEFTTDTVQSLIDEYADLTL----DHPSPGDDEGREIILRRYDVH 110
Query: 120 FGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRSDKF 177
FG++ + RP A + +LP R + +TY+A + KVT ++ K ++
Sbjct: 111 FGEIIISRPTLT--EATGETISLLPYECRDRNLTYSAPIYCKVTKRARIAVSEKKPLNQL 168
Query: 178 KTGKEDYXXXXXXXXXXXX-------------------------XXXGRLPVMVMSDLC- 211
+ D+ G++P+MV S +C
Sbjct: 169 TDDEHDHMARTGEHPTALRWIEEESAPPEPPKDDKINPENLKGYLFLGKIPIMVKSKICH 228
Query: 212 -WMKEAEK----GDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS-- 263
+M++ E +C +D GGYF+I G+EK +AQE+ + V P ++ Y++
Sbjct: 229 LYMEDDESLFTLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPPGGSVSYQAEI 288
Query: 264 ---LNKRNRLI--LKLVGNSKFEEINNGEKV----LSVYFLGVEVPVWILFFSLGVSSDK 314
L K +RLI L++ ++K ++ N G +++ ++ EV + I+F +LGV SD+
Sbjct: 289 RSALEKGSRLISSLQMRLHTKADQ-NKGRLANTVSVTLPYVKEEVSLAIVFRALGVVSDE 347
Query: 315 EIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGI----QYPPSE 370
+I++ I Y D+Q+ ++R E+ + + AL Y+ + G + +
Sbjct: 348 DILNHICYDRRDSQM----LEALRPCIEEAFCIQDREVALDYIGKRGNGSTGINRNGRIK 403
Query: 371 SMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+ +E L L P S RKA FL YMV LL GRR D+RD F KR
Sbjct: 404 AAKEMLQKELLPHISQAEGCETRKAFFLGYMVHKLLQCVLGRRDTDDRDHFGKKRLDLAG 463
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNG--DRDVRPIEHY-----LDASIITNGLQRAFS 479
A + + + L +DL G R V +H+ + AS +TNGL+ + +
Sbjct: 464 PL--------LAKLFRGIVRRLTQDLMGYMKRCVDTNKHFSLALGIKASTLTNGLKYSLA 515
Query: 480 TGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKV 539
TG W K + T+GV L R T++ LRRT + GK+ R H +HWG V
Sbjct: 516 TGNWGDQKKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLV 575
Query: 540 CFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGMEEL 582
C TP+G+ CGLVKNLS+ VS +++ I ++ ME L
Sbjct: 576 CPAETPEGQACGLVKNLSLMCFVSVGTLADPIIEFMIARNMEVL 619
>M3HH49_CANMA (tr|M3HH49) DNA-directed RNA polymerase (Fragment) OS=Candida
maltosa Xu316 GN=G210_3140 PE=3 SV=1
Length = 1229
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 163/565 (28%), Positives = 261/565 (46%), Gaps = 50/565 (8%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAF--DAFGDLNVTPSYDPSKK 107
E + + C FF E GLVS Q++S+++F+ +Q D+ L+ + K
Sbjct: 18 EPITQEDCWTVISSFFQEKGLVSQQLDSFDEFVETSIQELVWEDSHLILDQPAQHTSEKD 77
Query: 108 GDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF 167
+N+ F+ + FGK+ + +P G + P+ ARL+ +TY+A + V + +VF
Sbjct: 78 HENKRFE---IIFGKIYISKPSQTEGDGTTH--SVFPQEARLRNLTYSAPLYVDMVKKVF 132
Query: 168 TPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDC 221
K + K + D+ G++P+M+ S C +++ ++ +C
Sbjct: 133 ---KSDDNNRKDNELDWIEVESDDPESKIFL-GKVPIMLRSKFCALRDIQEEEFYELKEC 188
Query: 222 DFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI--- 271
+D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI
Sbjct: 189 PYDMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAIEKGSRLISSM 247
Query: 272 -LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+KL G E+ G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 248 QIKLYGRD--EKGVAGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQM 305
Query: 330 QNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG- 383
+ + + E F + L E K IQY ++ L L P
Sbjct: 306 LEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNI 358
Query: 384 --SSGL-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHA 440
G RKA FL YMV LLL R++ D+RD F KR ++ F
Sbjct: 359 TQEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKL 418
Query: 441 RKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANL 500
K + +QR + D + + + + IT+GL+ + +TG W K + +GV L
Sbjct: 419 TKDIYNYMQRCVENDTEFN-LTLAVKSQTITDGLRYSLATGNWGEQRKAMSSRAGVSQVL 477
Query: 501 GRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTG 560
R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 478 NRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMT 537
Query: 561 LVSTNI-SESIFPQLLDCGMEELVD 584
+S SE I L D G+E L D
Sbjct: 538 CISVGTPSEPILGFLRDYGLEVLED 562
>H1VSW6_COLHI (tr|H1VSW6) DNA-directed RNA polymerase OS=Colletotrichum
higginsianum (strain IMI 349063) GN=CH063_00471 PE=3
SV=1
Length = 1258
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 162/577 (28%), Positives = 261/577 (45%), Gaps = 59/577 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEH---F 113
C FF+ GLVS Q++S+++F ++ +Q D + + + P+ D++
Sbjct: 25 CWTVISSFFESKGLVSQQVDSFDEFTSSTVQELIDEYSQITLD---QPNPMSDSDKVIAL 81
Query: 114 KYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVEVQVF 167
+ VKFG V + RP A+ + +LP R + +TYA+ + KV++ V+
Sbjct: 82 RRYEVKFGTVMVSRPSIT--EADGKVTTLLPYECRDRNLTYASPLYVKITKKVSIAVEKP 139
Query: 168 TP-----HKVRSDKFKTGKE-------------DYXXXXXXXXXXXXXX-XGRLPVMVMS 208
P + + + TG+ DY GR+P+MV S
Sbjct: 140 IPLNELDEEQQDELANTGEHPTKLEWEEEESGEDYGADKNKSDDMKDMIFIGRMPIMVKS 199
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + ++ D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 200 KICHLSSEQEDDLFMLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKAQPSPYS 258
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI LKL + G+ + S+ ++ ++P+ I+F +LGV
Sbjct: 259 YTAEIRSALEKGSRLISSMMLKLYSKGDAAKGGYGQTIHCSLPYVKADLPIAIVFRALGV 318
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQY 366
SD++I++ I Y D+Q+ + I +A D + + GK ++ K ++
Sbjct: 319 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCIQDREVALDFIGKRGSNHNIPREKRVRT 378
Query: 367 PPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXX 426
+E L ++ RKA FL YMV LL GRR D+RD F KR
Sbjct: 379 AKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDTDDRDHFGKKRLDLAG 437
Query: 427 XXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHP 486
+ + +S L+R + +R + + ++NGL+ + +TG W
Sbjct: 438 PLLAKLFRNIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKYSLATGNWGDQ 496
Query: 487 YKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 546
K + T+GV L R T++ LRRT + GK+ R H +HWG VC TP+
Sbjct: 497 KKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPE 556
Query: 547 GENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
G+ CGLVKNLS+ VS +E I ++ GME L
Sbjct: 557 GQACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 593
>A7TTM7_VANPO (tr|A7TTM7) DNA-directed RNA polymerase OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_186p2
PE=3 SV=1
Length = 1223
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 248/547 (45%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQF+ LQ L + + + DN KY + FGK+
Sbjct: 34 FFREKGLVSQQLDSFNQFVDYTLQDIISEDSTLILEQLAQHTTESDNISRKYE-ISFGKI 92
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P ++ + P+ +RL+ +TY++ + V V + + V +
Sbjct: 93 YVTKPMV--NESDGVTHALYPQESRLRNLTYSSGLFVDVNKRTYEAVDVPGRDLNY--QL 148
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GRLP+M+ S C++ +A + D C FD GGYF+I G+EK
Sbjct: 149 IAEESEEDNENDKVFIGRLPIMLRSKNCYLSDATESDLYKLKECPFDMGGYFIINGSEKV 208
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E ++ +
Sbjct: 209 LIAQERSAGNIVQVF-KKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSTRTIK 267
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----DEKC 344
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + + D E
Sbjct: 268 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETA 327
Query: 345 SGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMV 398
F R+G AL +E K IQY + L P + L +RKA FL YM+
Sbjct: 328 LDFIGRRG-TALGIKKE--KRIQY-----ARDILQKEFLPHITQLEGFESRKAFFLGYMI 379
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL R+ D+RD F KR K F K + + +QR + D
Sbjct: 380 NRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKLTKDIFRYMQRTVEEANDF 439
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
++ ++A IT+GL+ A +TG W K + +GV L R T++ LRRT
Sbjct: 440 N-MKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNTP 498
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDC 577
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L +
Sbjct: 499 IGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEW 558
Query: 578 GMEELVD 584
GME L D
Sbjct: 559 GMEPLED 565
>B9RZ91_RICCO (tr|B9RZ91) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0936370 PE=3 SV=1
Length = 1194
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 262/534 (49%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 35 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 93
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 94 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 150 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 199
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 200 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSS 259
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 260 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQ 319
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 320 NQQVALDYIGKRGATVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 378
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 379 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVN- 437
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 438 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 496
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 497 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 548
>G3AW40_CANTC (tr|G3AW40) DNA-directed RNA polymerase OS=Candida tenuis (strain
ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC
10315 / NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_117313
PE=3 SV=1
Length = 1233
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 253/549 (46%), Gaps = 44/549 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+++FI +Q L + + + D E+ +Y + FGK+
Sbjct: 31 FFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLVLDQPAQHTSEDDFENRRYE-ISFGKI 89
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+ +P G M P+ ARL+ +TY++ + V + +VF +D+ E
Sbjct: 90 YISKPTQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKRVFKSDD--NDRKNNELEW 145
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDCDFDHGGYFLIKGAEKA 237
G++P+M+ S C +++ E +C +D GGYF+I G+EK
Sbjct: 146 IEEHVEGEGTDTKVYLGKVPIMLRSKFCMLRDLAEHEFYELKECPYDMGGYFVINGSEKV 205
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNG 286
+AQE Q+F KK S A +L K +RLI +KL G + +G
Sbjct: 206 LIAQERSAANIVQVF-KKAGPSPISHVAEIRSALEKGSRLISSLQIKLYGRD--DRAASG 262
Query: 287 EKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----- 340
+ ++ ++ ++P+ I+F +LG+ D +I++ I Y D Q+ + + +
Sbjct: 263 RTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHICYDANDWQMLEMLKPCVEEGFVIQE 322
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSG----LNRKARFLAY 396
E F + L E K IQY ++ L L P + RKA FL Y
Sbjct: 323 QEVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNITQEEGFATRKAFFLGY 375
Query: 397 MVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDR 456
MV LLL R++ D+RD F KR ++ F + + +QR + D+
Sbjct: 376 MVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLTRDIYNYMQRCVENDK 435
Query: 457 DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTR 516
+ + + + IT+GL+ + +TG W K + +GV L R T++ LRRT
Sbjct: 436 EFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTN 494
Query: 517 QQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLL 575
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S SE I L
Sbjct: 495 TPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTSSEPILVFLE 554
Query: 576 DCGMEELVD 584
+ G+E L D
Sbjct: 555 EWGLEPLED 563
>L0B045_BABEQ (tr|L0B045) DNA-directed RNA polymerase OS=Babesia equi
GN=BEWA_006360 PE=3 SV=1
Length = 1219
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 248/547 (45%), Gaps = 46/547 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF HGLV QI S+N FI +Q D + + P D E +KFG++
Sbjct: 83 FFSTHGLVHQQIESFNDFITYRMQEIIDEHPPIEIKPQPRYRPDDDLESNVTYRLKFGQL 142
Query: 124 TLDRPKFWGGAANAQEFKML-PRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKE 182
+L++P FK + P+ ARL+ +TYA+++ V +E + + + + K
Sbjct: 143 SLNKPCV---EEKDGVFKHIWPQEARLRNLTYASQIYVDIEQETYLKDETTGAETLQDKT 199
Query: 183 DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEK 236
Y GR+P+M+ S CW K A+ G+C +D GGYF++ G E+
Sbjct: 200 TYPRIPL----------GRMPMMLKSTYCWTKGLSEEDLADVGECPYDQGGYFIVNGGER 249
Query: 237 AFVAQEQL-------FLKKL-----WVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEIN 284
+AQE++ F KK +V+ A + + + ++ +G +
Sbjct: 250 VLIAQERMANNFIYVFKKKQPSKYSFVAEIRSQAEFSQGITPFSIMMKSSLGAPGSRFKS 309
Query: 285 NGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDAD--- 341
+G+ V ++ +L ++PV ILF +LG +D++I+ I Y ED Q+ N+ ++ +A
Sbjct: 310 HGQLVATIPYLRADIPVPILFRALGCVADRDILQRIVYDFEDKQMLNLMRATLEEASDYV 369
Query: 342 --EKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGSSGLNRKARFLAY 396
E C F ++G +E IQY + L ++ PGS G +K FL Y
Sbjct: 370 TQETCLDFIGKRGPTVGAPLETR---IQYAKDLLRQHLLPHVGTEPGSEG--KKCYFLGY 424
Query: 397 MVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDR 456
M+ LLL+ GR D+R+ F KR F K + LQ+ ++ R
Sbjct: 425 MIHRLLLSRLGRINEDDREHFGKKRLDLAGPLMASSFGTLFRKMAKDARRILQQQIDCGR 484
Query: 457 DVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTR 516
A+ IT GLQ TG W + +GV L R ++ LRR
Sbjct: 485 AFDVAGAIRSATTITQGLQYQLLTGNWGRDREGKIVRTGVSQVLNRLTFASYLSHLRRLN 544
Query: 517 QQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLL 575
+ GK+ R H +HWG +C TP+G+ GLVKNL++ +S +++ +I L
Sbjct: 545 TPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCYISVGSVAATINEFLS 604
Query: 576 DCGMEEL 582
+ GM+ L
Sbjct: 605 EWGMDSL 611
>R4XK42_9ASCO (tr|R4XK42) Uncharacterized protein OS=Taphrina deformans PYCC 5710
GN=TAPDE_004003 PE=4 SV=1
Length = 1223
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 251/544 (46%), Gaps = 41/544 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
+FD+ GLV+ Q++S+++FI +Q D L + S K + +Y + FG++
Sbjct: 26 YFDDKGLVAQQLSSFDEFIQNTMQEIVDEEKLLTIDNHQQHSGKSTDVTRRYE-ISFGQI 84
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
L +P G + M P+ ARL+ +TYA+ + V + +V H D
Sbjct: 85 YLSKPTMTEG--DGSTMHMFPQEARLRSLTYASALFVDMSKKVLVQHNYGDDFEVE---- 138
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWM------KEAEKGDCDFDHGGYFLIKGAEKA 237
G++P+M+ S+ C + + E +C D GGYF+I G+EK
Sbjct: 139 -----EEDDEPQKIFIGKVPIMLRSEFCVLNGLSDQEMQEVNECPLDSGGYFVINGSEKV 193
Query: 238 FVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLILKLVGNSKFEEINNGEKVL- 290
+AQE+ + V P + Y ++ K ++LI + K ++ + + +
Sbjct: 194 IIAQERSAANMVQVFRKAPPSPVSYLAEIRSAIEKGSKLISSMQIKLKAAKVGSTGQTIA 253
Query: 291 -SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS 345
++ ++ ++P+ I+F +LGV D++I+D I Y +D Q+ + I +A D + +
Sbjct: 254 ATLPYVKTDIPIVIVFRALGVVPDRDILDHICYDAKDRQMLEMLKPCIEEAFVIQDREVA 313
Query: 346 GFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFP---GSSGL-NRKARFLAYMVKSL 401
GK K ++Y ++ L + P S G RKA FL YMV L
Sbjct: 314 LDFIGKRGSAIGVTKEKRLRY-----AQDILQKEMLPHITTSEGFETRKAFFLGYMVHRL 368
Query: 402 LLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPI 461
LL RR D+RD F KR ++ F K + + + + ++ ++ +
Sbjct: 369 LLCALERRDPDDRDHFGKKRIDLAGPLLAGLFRMLFKRLTKDIRQYMTKCVDSGKEFN-L 427
Query: 462 EHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQY 521
+ + ITNGL+ + +TG W K++ GV L R T++ LRRT +
Sbjct: 428 PLAVKHTTITNGLRYSLATGTWGDQKKQMNARVGVSQVLNRYTYASTLSHLRRTNTPIGR 487
Query: 522 TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
GK+ R H +HWG VC TP+G+ CGLVKNL++ VS + S I L + GME
Sbjct: 488 DGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLALMSYVSVGSASAPIIEFLEEWGME 547
Query: 581 ELVD 584
L D
Sbjct: 548 SLED 551
>Q4N2K9_THEPA (tr|Q4N2K9) DNA-directed RNA polymerase OS=Theileria parva
GN=TP04_0340 PE=3 SV=1
Length = 1190
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 258/580 (44%), Gaps = 71/580 (12%)
Query: 41 NAEILKELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP 100
+++ LK + E+ + K FF+EHGLV QI S+N FI +Q DA + +TP
Sbjct: 45 HSQYLKAVDENFTEEDTWKVIGSFFNEHGLVHQQIESFNDFITYRMQEIIDAHPPIEITP 104
Query: 101 SYDPSKKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKML-PRHARLQRMTYAAKMK 159
+ + + E+ +KFG+++L++P FK + P+ ARL+ +TYA+++
Sbjct: 105 QPNYRPEEEEENSILYRLKFGQLSLNKPSV---EEKDGVFKHIWPQEARLRNLTYASQVY 161
Query: 160 VTVEVQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE---- 215
+ +E + F E+ R+P+M S CW +
Sbjct: 162 IDIEQETFV------------NENGKLVQTDSTVYPRVPLCRMPMMHKSSYCWTRGLNDR 209
Query: 216 --AEKGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSN--------------TPDWAI 259
++ G+C FD GGYF++ G E+ +AQE++ ++V N PD+
Sbjct: 210 DLSDIGECVFDQGGYFVVNGGERVLIAQERMANNFVYVFNKKNSKYSAVAQLRSQPDFIQ 269
Query: 260 GYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDL 319
G SL ++ NS ++ + V + ++ ++PV ILF +LG SD++I+
Sbjct: 270 GVTSLT-------IMISNS---QLTKNKMVAVLPYIRSDIPVPILFRALGCISDRDILQR 319
Query: 320 IDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY 379
I Y DTQ+ ++ S+ E+C ++G EE + +E L +
Sbjct: 320 IVYDFSDTQMLSLMRASL----EEC---KRGPTVGALHEERLN--------FAKETLRRH 364
Query: 380 LFP------GSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXX 433
P GS ++K +L YM+ LLL GR D+R+ F KR
Sbjct: 365 FLPHVGTEVGSE--SKKCFYLGYMIHRLLLNQLGRINEDDREHFGKKRLDLAGSLMASSF 422
Query: 434 KVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERT 493
F K + + L+ ++ R S IT GLQ TG W
Sbjct: 423 GTLFRKLAKDVERFLKNQIDSGRSFDVAGAIKSCSQITQGLQYQLLTGNWGRDKDGNVVR 482
Query: 494 SGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLV 553
+GV L R ++ LRR + GK+ R H +HWG +C TP+G+ GLV
Sbjct: 483 TGVSQVLNRLTFASYLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLV 542
Query: 554 KNLSVTGLVST-NISESIFPQLLDCGMEELVDDTTTFLSK 592
KNL++ +S ++S +I LL+ GM+ L D+ + L K
Sbjct: 543 KNLALMCYISVGSLSSTILDFLLEFGMDSL-DEISPILIK 581
>B5RV50_DEBHA (tr|B5RV50) DNA-directed RNA polymerase OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G07502g PE=3 SV=1
Length = 1232
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 256/563 (45%), Gaps = 44/563 (7%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF E GLVS Q++S+++FI +Q L + + + D
Sbjct: 18 ESITPENCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDSHLILDQPAQHTSEDD 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTP 169
+E+ +Y + FGK+ + +P G M P+ ARL+ +TY++ + V + +V
Sbjct: 78 HENRRYE-ITFGKIYISKPTQTEGDGTTH--PMFPQEARLRNLTYSSPLYVDMTKKVLKS 134
Query: 170 HKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDCDF 223
+++ E G++P+M+ S C ++ E +C +
Sbjct: 135 DD--NNRVDNELEWVEEKIEDEGPQTKVYLGKVPIMLRSKFCMLRGLGEHEFYELKECPY 192
Query: 224 DHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----L 272
D GGYF+I G+EK +AQE Q+F KK S A ++ K +RLI +
Sbjct: 193 DMGGYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHIAEIRSAIEKGSRLISSMQI 251
Query: 273 KLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQN 331
KL G ++ +G + ++ ++ ++P+ I+F +LGV D +I++ I Y D Q+
Sbjct: 252 KLYGRD--DKGTSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDANDWQMLE 309
Query: 332 IFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPG--- 383
+ + + E F + L E K IQY ++ L L P
Sbjct: 310 MLKPCVEEGFVIQEREVALDFIGRRGVLGIRRE--KRIQY-----AKDILQKELLPNITQ 362
Query: 384 SSGL-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARK 442
G RKA FL YMV LLL R++ D+RD F KR ++ F K
Sbjct: 363 EEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFKKLTK 422
Query: 443 RMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGR 502
+ +QR + D++ + + + IT+GL+ + +TG W K + +GV L R
Sbjct: 423 DIYNYMQRCVENDKEFN-LTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNR 481
Query: 503 TNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLV 562
T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +
Sbjct: 482 YTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCI 541
Query: 563 STNI-SESIFPQLLDCGMEELVD 584
S SE I L + GME L D
Sbjct: 542 SVGTSSEPILYFLEEWGMEPLED 564
>Q6CWA5_KLULA (tr|Q6CWA5) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0B05577g PE=3 SV=1
Length = 1221
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 245/546 (44%), Gaps = 39/546 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF E GLVS Q++S+NQFI +Q L + + + DN KY + FGK+
Sbjct: 31 FFREKGLVSQQLDSFNQFINYTIQDLILEDSTLILEQLAQHTTETDNISRKYE-ISFGKI 89
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
L +P ++ M P+ ARL+ +TYA+ + V ++ + + + K
Sbjct: 90 YLAKPSM--TESDGVSHAMYPQEARLRNLTYASGLFVEIQKRTYQAIDIPGRDLKYEII- 146
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKA 237
GR+P+M+ S C + + + D C FD GGYF+I G+EK
Sbjct: 147 -TEESEENEENNKIFIGRVPIMLRSKYCLLDDLTESDLYRLKECPFDMGGYFIINGSEKV 205
Query: 238 FVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV- 289
+AQE Q+F KK S A +L K +R I L E + +
Sbjct: 206 LIAQERSAGNIVQVF-KKSAPSPISHIAEIRSALEKGSRFISTLQVKLYGREGSTSRTIK 264
Query: 290 LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS------IRDADEK 343
++ ++ ++P+ I+F +LG+ D EI++ I Y D Q+ + I+D +
Sbjct: 265 ATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEEGFVIQDRETA 324
Query: 344 CSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVK 399
+ AL +E K IQY ++ L P + L +RKA FL YM+
Sbjct: 325 LDFIGRRGTALGIKKE--KRIQY-----AKDILQKEFLPHITQLEGFESRKAFFLGYMIN 377
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LLL R+ D+RD F KR K F + + + +QR + +D
Sbjct: 378 RLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTRDILRFMQRSVEEAKDFN 437
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
++ + A+ IT GL+ A +TG W K + +GV L R T++ LRRT +
Sbjct: 438 -LKLAVKATTITAGLKYALATGNWGEQKKSMSSRAGVSQVLNRYTYSSTLSHLRRTNTPI 496
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISE-SIFPQLLDCG 578
GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S I L + G
Sbjct: 497 GRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPLPIITFLNEWG 556
Query: 579 MEELVD 584
ME L D
Sbjct: 557 MEPLED 562
>Q1L5Y8_ANTMA (tr|Q1L5Y8) DNA-directed RNA polymerase OS=Antirrhinum majus
GN=RPB2 PE=2 SV=1
Length = 1200
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 264/534 (49%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P ++ D Y + FG
Sbjct: 41 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPDFAETIYK-ISFG 99
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 100 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVSKRVI--KKGHDGEEVTET 155
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C D GGYF+I G+E
Sbjct: 156 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSE 205
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNK-RNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ + +NR + ++++ + + ++
Sbjct: 206 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEAQNRPPSTMFVRMLSRTSAKGGSS 265
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I + + DTQ+ + S+ +A
Sbjct: 266 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICFNSSDTQMMELLRPSLEEAFVIQ 325
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 326 NQQVALDYIGKRGSTVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 384
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 385 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVN- 443
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 444 LQFXIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLBSPIG 502
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 503 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 554
>Q1L5B5_RHOMC (tr|Q1L5B5) DNA-directed RNA polymerase OS=Rhododendron
macrophyllum GN=RPB2 PE=2 SV=1
Length = 1191
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 262/534 (49%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 32 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 90
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 91 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 146
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 147 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 196
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 197 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSS 256
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 257 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQ 316
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 317 NQQVALDYIGKRGATVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 375
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 376 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN- 434
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 435 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 493
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 494 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 545
>L1JND3_GUITH (tr|L1JND3) DNA-directed RNA polymerase OS=Guillardia theta
CCMP2712 GN=GUITHDRAFT_159421 PE=3 SV=1
Length = 1185
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 255/564 (45%), Gaps = 75/564 (13%)
Query: 62 RMFFDEHGLVSHQINSYNQFIAAGLQAAFDAF-GDLNV--TPSYDPSKKGDNEHFKYATV 118
R +FDE+GLV Q SYN+FI +Q + + G + V TP Y P K D + + V
Sbjct: 20 RKYFDENGLVQQQRASYNEFILQNVQEVIEDYKGQIEVIATPQYKPGTKQD--YKQKIQV 77
Query: 119 KFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFK 178
FG+V + +P ++ ++LP ARL+++TY+ ++ V + ++ + KV SD
Sbjct: 78 DFGRVRIAQPNIT--EVEGRKERLLPYMARLRKLTYSCQLFVDITLRKY---KVASD--- 129
Query: 179 TGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIK 232
G E G++PVM+ S++C + D C D GGYF+I
Sbjct: 130 -GSEQLDNIDEHERVPL----GKVPVMLRSEVCRLFGKYNKDIMDLKECPQDQGGYFVIN 184
Query: 233 GAEKAFVAQEQ-------LFLKKL----WVS---------NTPDWAIGYKSLNKRNRLIL 272
G+EK +AQE+ +F K L +V+ N P + K N+ N
Sbjct: 185 GSEKVLLAQERRANNLVFVFKKTLGKFAYVAEVGSQVEKGNKPPSTLYMKLWNREN---- 240
Query: 273 KLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNI 332
N++F VL++ ++ E+P+ I+F +LG+ SD+EI++ I Y +D Q+
Sbjct: 241 ----NARF----GASVVLTLPYVRKEIPIVIVFRALGIESDREILEHIVYNLKDVQMMEA 292
Query: 333 FFGSIRDADEKCSG--FRKGKNALHYMEEHVKGIQYPPSESMEECLNLY---LFP----G 383
S+ DE G + AL Y+ G+ ++ ++ L P
Sbjct: 293 LRPSL---DEAAQGKDLSTREAALDYIGRRALGMTTSRENRIQHAHDILIRELLPHIGIT 349
Query: 384 SSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKR 443
L +K FL Y+ LL GRR+ D+RD + NKR K F K
Sbjct: 350 EESLTKKQYFLGYVCNRLLACSLGRRQPDDRDHYGNKRVDMAGPLLAGLFKGCFKRLVKE 409
Query: 444 MSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAW----THPYKRLERTSGVVAN 499
K+LQ L+ ++V + IT G++ +TG W + RT GV
Sbjct: 410 FRKSLQDSLDNGKEVN-MNTAFKQDFITKGIKYCMATGNWGVGKAAVAGQATRT-GVSQV 467
Query: 500 LGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVT 559
L R ++ LRR + GK+ R H + WG VC TP+G+ CGLVKNLS+
Sbjct: 468 LSRLTFAAALSHLRRANTPIGKEGKIAQPRQLHNTQWGVVCPAETPEGQACGLVKNLSLM 527
Query: 560 GLVSTNISESIFPQLLDC-GMEEL 582
VS + + +LL GMEEL
Sbjct: 528 TYVSVGGASQVIIELLQAGGMEEL 551
>H8ZDJ7_NEMS1 (tr|H8ZDJ7) DNA-directed RNA polymerase OS=Nematocida sp. 1 (strain
ERTm2 / ATCC PRA-371) GN=NERG_01668 PE=3 SV=1
Length = 1137
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 250/550 (45%), Gaps = 73/550 (13%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C K FF + GLV Q++S+N+FI + +Q D + V ++ P+ G+ E +
Sbjct: 9 CWKVVSAFFKDKGLVRQQLDSFNEFIQSTMQEVVDENSKI-VLMAHSPT--GEEEKARKY 65
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKV-TVEVQVFTPHKVRSD 175
T++F ++ + +P + + M P AR++ +TY+A + + V+ + +V S
Sbjct: 66 TIEFKQIYVSKPPTIT-EPDGRTSPMFPNDARVRSLTYSASLYIDIVKTEHIGDEEVESR 124
Query: 176 KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYF 229
+K G +P+M+ S C + D C +D GGYF
Sbjct: 125 TYK-----------------RMPIGSIPIMLRSLYCVYSNTDDKDMNRIEECTYDQGGYF 167
Query: 230 LIKGAEKAFVAQEQL---------------FLKKLWVSNTPDWAIGYKSLNKRNRLILKL 274
++ G+EK +A E++ +L + + PD + S L ++L
Sbjct: 168 IVNGSEKVLIAHERMASNLVYIFKKAPPSPYLYTAEMRSVPDHGLRLPS-----SLTIRL 222
Query: 275 VGNSKFEEINNGEKVLSVYFLGV-------EVPVWILFFSLGVSSDKEIIDLIDYGNEDT 327
V S G YFL +VPV ++F +LG SDKEI++ I Y DT
Sbjct: 223 VARSSDNASGGG------YFLRALLPHAKQDVPVVVIFRALGFVSDKEILEHICYDFSDT 276
Query: 328 QIQNIFFGSIRDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY---LFP-- 382
++ ++ SI +A + AL Y+ + V + + ++ +L+ P
Sbjct: 277 EMLSMLRPSIEEA----FVIQDQGVALDYIGKRVAPAGFSKEKRIKFAKDLFQREFLPHV 332
Query: 383 GSSGL--NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHA 440
G+ +KA L Y + LL+ GRR ++RD + KR ++ F
Sbjct: 333 GTKEFCETKKAYLLGYTINKLLMVALGRRSEEDRDHYGRKRLDLAGPLMAGLFRMLFKKM 392
Query: 441 RKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANL 500
++K +QR ++G++D+ I L S +TNGL+ + +TG W K ++ +GV L
Sbjct: 393 SNELAKYMQRCIDGNKDLNLIVG-LRTSTLTNGLRYSLATGNWGEQSKSMQARAGVAQVL 451
Query: 501 GRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTG 560
R N + T++ LRR + GK+ R H SHWG VC TP+G+ CGLVKN ++
Sbjct: 452 NRYNYISTLSHLRRVNTPIGRDGKLAKPRQLHSSHWGMVCPAETPEGQACGLVKNFALMS 511
Query: 561 LVSTNISESI 570
+S + SI
Sbjct: 512 HISVGSNSSI 521
>C1E1U0_MICSR (tr|C1E1U0) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_93697 PE=3 SV=1
Length = 1178
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 249/539 (46%), Gaps = 41/539 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
FF+E GL Q++S+N+FI +Q D D + P + P ++ D + K V+F
Sbjct: 26 FFEEKGLARQQLDSFNEFIQHTMQEIVDEMSDFTIEPEEQHMPGEEADGKGKKKYKVEFK 85
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P A+ + P+ ARL+ +TY+A + + + T +D+
Sbjct: 86 QIYLSKPMVT--EADGMTSTLFPKEARLRNLTYSAPLYIDMAKSTIT----TTDEIDATT 139
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
Y G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 140 GKYIETIDTEEYPKVFF-GKVPIMLRSQYCSLHDHTDKELTELGECPYDEGGYFIINGSE 198
Query: 236 KAFVAQEQLFLKKLWV--SNTPD---WAIGYKSL----NKRNRLILKLVGNSKFEEINNG 286
K +AQE++ ++V P W +S + + + ++ + G
Sbjct: 199 KVLIAQEKMSTNHVYVFEKRQPSKYMWVAECRSSPESGARAASSCMARLCHAPGTKDEAG 258
Query: 287 EKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDAD----E 342
+++ ++ E+P++++F +LG +DK+I++ + Y ED ++ + SI +A +
Sbjct: 259 VISVTIPYIRTEIPLFVVFRALGFVADKDILEHLVYDFEDHEMMQLLRNSIEEAQVIQSQ 318
Query: 343 KCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLN-----RKARFLAYM 397
+ GK K IQY E L L P G+N +KA FL Y+
Sbjct: 319 DVALDFIGKRGSAVGVTRPKRIQYA-----REILQKELLP-HVGVNEGCETKKAYFLGYI 372
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
V LLL GR+K D+RD F NKR + F K + QR ++ +D
Sbjct: 373 VNRLLLCALGRKKEDDRDHFGNKRMDLSGPLIAMLFRQLFRKVTKDVRLYSQRCIDSGKD 432
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
++ + + A IT+GL+ + +TG W + R +GV L R + T++ LRR
Sbjct: 433 IQ-LTLAVKAKTITSGLKYSLATGNWGAQGAQDIR-AGVSQVLNRLSFSSTLSHLRRLNS 490
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
+ GK+ R H SHWG VC TP+G+ GLVKNLS+ LVS + + L+
Sbjct: 491 PIGREGKLAKPRQLHNSHWGMVCPAETPEGQAVGLVKNLSLMCLVSVGSPSAPLLEFLE 549
>M7NUD7_9ASCO (tr|M7NUD7) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_01059 PE=4 SV=1
Length = 1218
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 258/547 (47%), Gaps = 41/547 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKG-DNEHFKYATVKFGK 122
FFDE GLVS QI+S+++FI +Q D D +T G + + + + FG+
Sbjct: 32 FFDEKGLVSTQIDSFDEFIQNTMQELVDE--DATLTLDQHAQHTGIEGDVTRRYEINFGQ 89
Query: 123 VTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKE 182
+ L +P + Q M P+ ARL+ +TY++ + V ++ +V + +D
Sbjct: 90 IFLSKPSMTEADGSTQ--LMFPQEARLRNLTYSSPLYVDIKKKVM----IATDPSAPFGS 143
Query: 183 DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM------KEAEKGDCDFDHGGYFLIKGAEK 236
D G++P+M+ S C + + E +C +D GGYF+I G+EK
Sbjct: 144 DKEWIIEEDEQPSKVFIGKIPIMLRSTFCILNGLPESELYELNECPYDQGGYFIINGSEK 203
Query: 237 AFVAQEQLFLKKLWVSNTP-DWAIGY-----KSLNKRNRLI----LKLVGNSKFEEINNG 286
+AQE+ + V P A+ Y ++ K ++L+ +KL+ SK E G
Sbjct: 204 VIIAQERSAANTVQVFKKPAPSAVSYVAEIRSAVEKSSKLMSNFQIKLM--SKSIEKGAG 261
Query: 287 EKVLSVY-FLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCS 345
+ + + ++ ++P+ I+F +LGV D++I++ I Y D Q+ + I E+
Sbjct: 262 QTIRACLPYIRNDIPIVIVFRALGVVPDRDIMEHICYDPNDHQMLEMLKPCI----EEAF 317
Query: 346 GFRKGKNALHYMEEHVKGIQYPPSESM---EECLNLYLFPGSSGL----NRKARFLAYMV 398
++ + AL ++ + + + + ++ L L P + RKA FL YM+
Sbjct: 318 VIQEREVALDFIGKRGSAVGINREKRLRYAQDILQKELLPHITTTEGYETRKAFFLGYMI 377
Query: 399 KSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDV 458
LLL RR D+RD F KR ++ F K + K +Q+ + +R+
Sbjct: 378 HRLLLCALERRDPDDRDHFGKKRLDLAGPLLANLFRMLFKKLTKDVYKYMQKCVETNREF 437
Query: 459 RPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQ 518
+ + ++ IT+GL+ + +TG W K + GV L R T++ LRRT
Sbjct: 438 N-LTLAVKSNTITHGLRYSLATGNWGDQKKIMSARVGVSQVLNRYTFASTLSHLRRTNTP 496
Query: 519 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDC 577
+ GKV R H +HWG VC TP+G+ CGLVKNLS+ VS + S I L +
Sbjct: 497 IGRDGKVAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSYVSVGSASAPIIEFLEEW 556
Query: 578 GMEELVD 584
GME L D
Sbjct: 557 GMENLED 563
>Q1L5Y9_PETHY (tr|Q1L5Y9) DNA-directed RNA polymerase OS=Petunia hybrida GN=RPB2
PE=2 SV=1
Length = 1195
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 261/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 36 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-INFG 94
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 95 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 150
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C D GGYF+I G+E
Sbjct: 151 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSE 200
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 201 KVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSS 260
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 261 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQ 320
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 321 NQQVALDYIGKRGATVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 379
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 380 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVN- 438
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 439 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 497
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 498 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 549
>K7XFL4_9EURO (tr|K7XFL4) DNA-directed RNA polymerase (Fragment) OS=Ascosphaera
torchioi GN=rpb2 PE=3 SV=1
Length = 1137
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/566 (27%), Positives = 257/566 (45%), Gaps = 56/566 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK-KGDNEHFKYATVKFGK 122
FF+ GLVS Q++S+++FI+ +Q + G + + + P + + D + +KFG
Sbjct: 6 FFETKGLVSQQLDSFDEFISTTMQELVEEQGQVTLDQTLAPEEDEVDPVVLRRYELKFGT 65
Query: 123 VTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT-PHKVRSDKFKT-- 179
V L RP G + MLP+ ARL+ +TY++ + +++ ++ ++ S++
Sbjct: 66 VMLGRPSMTEG--DGATSIMLPQEARLRNLTYSSPLYLSITKRITEGRERLISERDDDDQ 123
Query: 180 ----------GKEDY-----XXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------ 218
G+ Y G++P+M+ S C +K+ +
Sbjct: 124 VEDDIDDSGKGRGTYLHWEPKTLADDDPEEENVFIGKMPIMLKSKYCILKDLNEQSLYNW 183
Query: 219 GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI 271
+C +D GGYF+I G+EK +AQE Q+F KK S TP A ++ K +R++
Sbjct: 184 NECPYDSGGYFIINGSEKVLIAQERSAGNIVQVF-KKAPPSPTPYVAEIRSAVEKGSRIL 242
Query: 272 ----LKLVGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIIDLIDYGNED 326
+KL + G + S ++ ++P+ ++F +LGV SD++I++ I Y D
Sbjct: 243 SQLSIKLFAKGDSSKGGFGSTIRSTLPYIRTDIPIVVVFRALGVVSDEDILNHICYDRND 302
Query: 327 TQIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLF 381
T + + I + E F + H K ++Y +E L ++
Sbjct: 303 TPMLEMLKPCIEEGFVIQDREVALDFISKRGTSPTTMNHEKRVRYAREIIQKEFLP-HIS 361
Query: 382 PGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHAR 441
RKA FL YMV LL GRR D+RD F KR + F
Sbjct: 362 QSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHFGKKRLDLAGPLLAGLFRTLFMRLT 421
Query: 442 KRMSKALQRDLNGDRDVRPIEHYLD----ASIITNGLQRAFSTGAWTHPYKRLERTSGVV 497
K + K +QR + +R + YL+ AS ++ GL+ A +TG W K +GV
Sbjct: 422 KDLYKYVQRCVETNRQL-----YLNIGVKASTLSGGLKYALATGNWGEQKKAASSKAGVS 476
Query: 498 ANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLS 557
L R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNL+
Sbjct: 477 QVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLA 536
Query: 558 VTGLVSTNI-SESIFPQLLDCGMEEL 582
+ ++ SE I ++ ME L
Sbjct: 537 LMCSITVGTPSEPIIDFMIQRNMEVL 562
>E9GHI4_DAPPU (tr|E9GHI4) DNA-directed RNA polymerase OS=Daphnia pulex
GN=DAPPUDRAFT_102782 PE=3 SV=1
Length = 1174
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/559 (26%), Positives = 256/559 (45%), Gaps = 55/559 (9%)
Query: 46 KELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPS 105
+E+ ++ + C +FDE GLV Q++S+++FI +Q + +++ S
Sbjct: 15 EEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAIDLQAEAQHS 74
Query: 106 KKGDNEHFKYATVKFGKVTLDRPKFW--GGAANAQEFKMLPRHARLQRMTYAAKMKVTVE 163
G+ E+ +KF ++ L +P W GA A M+P ARL+ +TY+A + V +
Sbjct: 75 S-GEVENPPRYVLKFEQIYLSKPTHWEKDGAPTA----MMPNEARLRNLTYSAPLYVDIT 129
Query: 164 VQVFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AE 217
V HK ++ +T + G++P+M+ S C + E
Sbjct: 130 KTV---HKEGEEQVETQHQ-------------KTFIGKIPIMLRSTYCLLNGMNDRDLCE 173
Query: 218 KGDCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKS-----LNKRNRLIL 272
+C D GGYF+I G+EK +AQE++ ++V + D YK+ L +R
Sbjct: 174 LNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKFAYKTEIRSCLEHSSRPTS 233
Query: 273 KLV------GNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIIDLIDYGNE 325
L G ++ G++++++ ++ E+P+ I+F +LG +D++I++ I Y E
Sbjct: 234 TLYVNMLARGGQGIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFE 293
Query: 326 DTQIQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLF 381
D ++ + S+ +A ++ + G K I+Y E L +
Sbjct: 294 DPEMMEMVKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYA-----REILQKEML 348
Query: 382 P--GSSGL--NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHF 437
P G S +KA FL YMV LLLA GRR+ D+RD + NKR + F
Sbjct: 349 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRALF 408
Query: 438 AHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVV 497
K + Q+ ++ +D +E + IIT+GL+ + +TG W K + +GV
Sbjct: 409 KTLMKEVRMYAQKFIDRGKDFN-LELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVS 467
Query: 498 ANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLS 557
L R T++ LRR + GK+ R H + WG VC TP+G GLVKNL+
Sbjct: 468 QVLNRLTFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGAAVGLVKNLA 527
Query: 558 VTGLVSTNISESIFPQLLD 576
+ +S S + L+
Sbjct: 528 LMAYISVGSQPSPILEFLE 546
>L2GHB3_COLGN (tr|L2GHB3) DNA-directed RNA polymerase OS=Colletotrichum
gloeosporioides (strain Nara gc5) GN=CGGC5_15282 PE=3
SV=1
Length = 1259
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 263/587 (44%), Gaps = 59/587 (10%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
E E + C FF+ GLVS Q++S+++F ++ +Q D + + + P+
Sbjct: 15 EEDESITPEDCWTVISSFFESKGLVSQQVDSFDEFTSSTVQELIDEYSQITLD---QPNP 71
Query: 107 KGDNEH---FKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM----- 158
D++ + VKFG V + RP A+ + +LP R + +TYA+ +
Sbjct: 72 MSDSDKVIALRRYEVKFGTVMVSRPSIT--EADGKVTTLLPYECRDRNLTYASPLYVKIT 129
Query: 159 -KVTVEVQVFTP-----HKVRSDKFKTGKE-------------DYXXXXXXXXXXXXXX- 198
KV++ V+ P + + + TG+ DY
Sbjct: 130 KKVSIAVEKPIPLNELDEEQQEELANTGEHPTKLEWEEEESGEDYGADKNKSDDMKDMIF 189
Query: 199 XGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLF 245
GR+P+MV S +C + ++ D C +D GGYF+I G+EK +AQE Q+F
Sbjct: 190 IGRMPIMVKSKICHLSSEQEDDLFMLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF 249
Query: 246 LKKLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVP 300
KK S A +L K +RLI LKL + G+ + S+ ++ ++P
Sbjct: 250 -KKAQPSPYSYTAEIRSALEKGSRLISSMMLKLYSKGDAAKGGYGQTIHCSLPYVKSDLP 308
Query: 301 VWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCSGFRKGKNALHY 356
+ I+F +LGV SD++I++ I Y D+Q+ + I +A D + + GK ++
Sbjct: 309 IAIVFRALGVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFCIQDREVALDFIGKRGSNH 368
Query: 357 MEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDD 416
K ++ +E L ++ RKA FL YMV LL GRR D+RD
Sbjct: 369 NIPREKRVRTAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRRDTDDRDH 427
Query: 417 FRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQR 476
F KR + + +S L+R + +R + + ++NGL+
Sbjct: 428 FGKKRLDLAGPLLAKLFRNIVRRMNQELSGHLKRCVESNRQFS-LTLGVKPQTLSNGLKY 486
Query: 477 AFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHW 536
+ +TG W K T+GV L R T++ LRRT + GK+ R H +HW
Sbjct: 487 SLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHW 546
Query: 537 GKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
G VC TP+G+ CGLVKNLS+ VS +E I ++ GME L
Sbjct: 547 GLVCPAETPEGQACGLVKNLSLMCYVSVGTPAEPIIDYMIQRGMEVL 593
>M2QXP9_CERSU (tr|M2QXP9) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_110450 PE=3 SV=1
Length = 1242
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 260/561 (46%), Gaps = 56/561 (9%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF++ GLV Q++S+++F+ +Q D DL + D + + +
Sbjct: 38 CWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENSDL-ILDQADQHTGHEADVTRRY 96
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT----PHKV 172
+KFG++ L RP A+ + P+ AR + +TY+A + + ++ +V P
Sbjct: 97 EIKFGQIYLSRPTV--TEADGSVVPVFPQEARQRNLTYSAPLYIEIKKRVLIGREDPDSA 154
Query: 173 RSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHG 226
D ++ G++P+M+ S C + + + C +D G
Sbjct: 155 TGDILWEPEQ-----RETAEDTTKVWIGKVPIMLRSTFCILHNVQDSELYDLNECPYDSG 209
Query: 227 GYFLIKGAEKAFVAQEQLFLKKLWV----SNTP-DWAIGYKSLNKR-----NRLILKLVG 276
GYF+I G+EK +AQE++ ++V +P + +S +R ++ +KL
Sbjct: 210 GYFIINGSEKVLIAQERMATNHVYVFAKAQPSPISFLAEIRSAVERGGKTISQFQVKLYH 269
Query: 277 NSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGS 336
++ + N K ++ ++ V++P+W++F +LGV SD++I++ I Y +D Q+ +
Sbjct: 270 RNQERSLGNVMKA-TIPYIKVDIPIWVVFRALGVISDRDILEHICYDMQDAQMLEMLKPC 328
Query: 337 IRDA----DEKCS-------GFRKGKNA---LHYMEEHVKGIQYPPSESMEECLNLYLFP 382
I D D + + G G N L Y +E ++ + P SM E
Sbjct: 329 IDDGFVIQDREVALDFIGNRGTTTGLNRERRLRYAQEILQK-EMLPHVSMAE-------- 379
Query: 383 GSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARK 442
GS ++KA F YM+ LLLA RR D+RD F KR ++ F K
Sbjct: 380 GSE--SKKAYFFGYMIHRLLLAALERRDLDDRDHFGKKRLDLAGPLLANLFRMLFRKLTK 437
Query: 443 RMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGR 502
+ + LQ+ + ++ + + + ITNGL+ + +TG W K + +GV L R
Sbjct: 438 DVYRYLQKCVESHKEFN-LSLAVKHNTITNGLKYSLATGNWGDQKKSMASKAGVSQVLNR 496
Query: 503 TNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLV 562
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +
Sbjct: 497 YTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCI 556
Query: 563 ST-NISESIFPQLLDCGMEEL 582
S ++S + L + G+E L
Sbjct: 557 SVGSLSAPVIEFLEEWGLESL 577
>G7I5Y3_MEDTR (tr|G7I5Y3) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_1g023500 PE=3 SV=1
Length = 1213
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 260/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 36 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 94
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 95 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVSKRVI--KKGHDGEEVTET 150
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 151 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 200
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 201 KVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSS 260
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 261 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQ 320
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y +E L ++ G +KA + Y++
Sbjct: 321 NQQVALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLP-HVGVGEYCETKKAYYFGYIIHR 379
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 380 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN- 438
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 439 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 497
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 498 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 549
>M1CWR0_SOLTU (tr|M1CWR0) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400029721 PE=3 SV=1
Length = 1191
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 261/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 32 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-INFG 90
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 91 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 146
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C D GGYF+I G+E
Sbjct: 147 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSE 196
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 197 KVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSS 256
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 257 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQ 316
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 317 NQQVALDYIGKRGATVGVTREKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 375
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 376 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN- 434
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 435 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 493
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 494 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 545
>N1RYS8_FUSOX (tr|N1RYS8) DNA-directed RNA polymerase II subunit RPB2 OS=Fusarium
oxysporum f. sp. cubense race 4 GN=FOC4_g10009029 PE=4
SV=1
Length = 1262
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 259/579 (44%), Gaps = 55/579 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GL S Q +S+++F +Q + + + + P+ G
Sbjct: 16 EGITPEDCWTVISSFFETKGLASQQTDSFDEFTQTMVQDLVNEYSTITLDQHNPPAPPGV 75
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAK--MKVTVEVQVF 167
N + +KFG V + RP + +LP R + +TYAA +K+T +V V
Sbjct: 76 NIALRRYEIKFGSVMVSRPSM--SETDGTVTNLLPYECRDRNLTYAAPTYLKITKKVSVA 133
Query: 168 TPHKV---------RSDKFKTGK----------EDYXXXXXXXXXXXXXXXGRLPVMVMS 208
++ +++ +TG+ ED G++P+MV S
Sbjct: 134 VDKEIPLHEMDDEQQAEYKRTGENPTKLVWEVEEDAGSIKAEDEPSEMIFIGKMPIMVKS 193
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 194 KICHLSSHSDEDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPYT 252
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI +KL G G+ + ++ F+ ++PV I+F +LGV
Sbjct: 253 YTAEIRSALEKGSRLISSLTMKLYGKGDSARGGFGQTIQATLPFVKADLPVAIVFRALGV 312
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVK 362
SD++I++ I Y D+Q+ + I +A D + + G R ++ E K
Sbjct: 313 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQASLGRE--K 370
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++ +E L ++ RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 371 RVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRL 429
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ +S L+R + +R+ + + S ++NGL+ + +TG
Sbjct: 430 DLAGPLLAKLFRGIIRRINTELSNYLKRCVESNRNFN-LTVAIKPSTLSNGLKYSLATGN 488
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPA 548
Query: 543 STPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + ++ + +++ GME
Sbjct: 549 ETPEGQACGLVKNLSLMCYVSVGSPADPLIEFMINRGME 587
>I0YKM0_9CHLO (tr|I0YKM0) DNA-directed RNA polymerase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_54821 PE=3 SV=1
Length = 1170
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 252/537 (46%), Gaps = 47/537 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF+ GLV Q++S+N+FI + +Q D +G L V P + K V+FG++
Sbjct: 29 FFEAKGLVRQQLDSFNEFINSNMQEIVDEYGTLLVKPESQHNPGMAELEEKEYKVEFGQI 88
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
L +P A+ + + P+ ARL+ +TYAA + + ++ V T +V + + +T +E
Sbjct: 89 YLSKPTM--TEADGETVVLFPKEARLRNLTYAAPLYIDIKKTVIT--RVPNGEAETEEES 144
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
Y G +P+M+ S C + E + G+C +D GGYF++ G+EK
Sbjct: 145 YPKIFI----------GEVPIMLRSSYCSLHERTNQQLTQLGECPYDQGGYFVVNGSEKV 194
Query: 238 FVAQEQLFLKKLWV---SNTPDWA-------IGYKSLNKRNRLILKLVGNSKFEEINNGE 287
+AQE++ +++V S +A + S + + ++++ S + G+
Sbjct: 195 LIAQERMANNQVYVFRKSQPSKYAYQAECRSVVENSTRNTSSMSIRMLARSGGK---GGQ 251
Query: 288 KV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA-----D 341
+ ++ ++ ++P+ I+F +LG+++DK+I+ + Y DT + SI +A
Sbjct: 252 AIRATLPYIRADIPILIIFRALGLTADKDILQHVVYDFNDTAMMEALRPSIEEAFPIQTQ 311
Query: 342 EKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVK 399
E F ++G N E K I Y E L ++ G +KA F YMV
Sbjct: 312 EVALDFIGKRGSNPGVTRE---KRIHYARDILQREMLP-HVAIGEFSETKKAYFFGYMVH 367
Query: 400 SLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVR 459
LLL GRR D+RD + NKR + F K + +Q+ ++ +++
Sbjct: 368 RLLLVALGRRDQDDRDHYCNKRLDLGGPLLANLFRQLFRKLTKDVRSHVQKAVDRGKEIN 427
Query: 460 PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQV 519
+ ++ IT GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 428 -LMAAVNKDTITRGLRYSIATGNWGMQGTAGMR-AGVSQVLNRLTYASTLSHLRRISSPI 485
Query: 520 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
GK+ R H S WG +C TP+G+ CGLVKNL++ VS + + L+
Sbjct: 486 GREGKLAKPRQLHNSQWGVICPAETPEGQACGLVKNLALMSYVSVGCPSAPIGEFLE 542
>D8PSD2_SCHCM (tr|D8PSD2) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_73589 PE=3 SV=1
Length = 1204
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 265/565 (46%), Gaps = 59/565 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHF--- 113
C FFDE GLV Q++S+++FI +Q D +L + D +++ +F
Sbjct: 18 CWTVISSFFDEKGLVRQQLDSFDEFIQNTMQELVDENPELIL----DQAEQHTGHNFDQS 73
Query: 114 KYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH--- 170
K ++FG++ L RP A+ + P+ ARL+ +TYAA + +E++ T H
Sbjct: 74 KRFEIQFGQIYLSRPTI--TEADGSVVPVFPQEARLRNLTYAAPL--YIEMRQKTLHATD 129
Query: 171 ---KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEA------EKGDC 221
+ ++T KED G++P+M+ S C + + + +C
Sbjct: 130 ELDEAGEPIWRTVKED------EGNAVQKVHIGKVPIMLRSAFCILNKLSDQEIYDLNEC 183
Query: 222 DFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI---- 271
+D GGYF+I G+EK +AQE++ ++V + I + ++ K + I
Sbjct: 184 PYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQFQ 243
Query: 272 LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQN 331
+K+ +K + N K ++ ++ V++P+W++F +L V SD++I+D I Y + D Q+
Sbjct: 244 VKMFHRTKERSMGNVIKA-TIPYIKVDIPIWVVFRALNVISDRDILDHICYESTDPQMLE 302
Query: 332 IFFGSIRDA-----DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGS 384
+ I D E F +G E V+ Q E +++ L ++
Sbjct: 303 LLKPCIDDGFVIQEREVALDFIGNRGTTTGLNRERRVRYAQ----EILQKELLPHVSMAE 358
Query: 385 SGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRM 444
++KA F YMV LLLA RR+ D+RD F KR ++ F K +
Sbjct: 359 GSESKKAYFFGYMVHRLLLAALERRELDDRDHFGKKRLDLAGPLLAGLFRMLFRKMTKDV 418
Query: 445 SKALQRDLNGDRDVR---PIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLG 501
+ LQ+ + ++D I+H+ I+ GL+ + +TG W K +GV L
Sbjct: 419 YRYLQKCVESNKDFNLNLAIKHH----TISQGLKYSLATGNWGDQKKAGAAKAGVSQVLN 474
Query: 502 RTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGL 561
R T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 475 RYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAC 534
Query: 562 VST-NISESIFPQLLDCGMEELVDD 585
+S +IS + L + +E L ++
Sbjct: 535 ISVGSISAPVIDFLQEWNLESLEEN 559
>N4UH38_FUSOX (tr|N4UH38) DNA-directed RNA polymerase II subunit RPB2 OS=Fusarium
oxysporum f. sp. cubense race 1 GN=FOC1_g10009943 PE=4
SV=1
Length = 1260
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 259/579 (44%), Gaps = 55/579 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GL S Q +S+++F +Q + + + + P+ G
Sbjct: 16 EGITPEDCWTVISSFFETKGLASQQTDSFDEFTQTMVQDLVNEYSTITLDQHNPPAPPGV 75
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAK--MKVTVEVQVF 167
N + +KFG V + RP + +LP R + +TYAA +K+T +V V
Sbjct: 76 NIALRRYEIKFGSVMVSRPSM--SETDGTVTNLLPYECRDRNLTYAAPTYLKITKKVSVA 133
Query: 168 TPHKV---------RSDKFKTGK----------EDYXXXXXXXXXXXXXXXGRLPVMVMS 208
++ +++ +TG+ ED G++P+MV S
Sbjct: 134 VDKEIPLHEMDDEQQAEYKRTGENPTKLVWEVEEDAGSIKAEDEPSEMIFIGKMPIMVKS 193
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 194 KICHLSSHSDEDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPYT 252
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI +KL G G+ + ++ F+ ++PV I+F +LGV
Sbjct: 253 YTAEIRSALEKGSRLISSLTMKLYGKGDSARGGFGQTIQATLPFVKADLPVAIVFRALGV 312
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVK 362
SD++I++ I Y D+Q+ + I +A D + + G R ++ E K
Sbjct: 313 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQASLGRE--K 370
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++ +E L ++ RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 371 RVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRL 429
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ +S L+R + +R+ + + S ++NGL+ + +TG
Sbjct: 430 DLAGPLLAKLFRGIIRRINTELSNYLKRCVESNRNFN-LTVAIKPSTLSNGLKYSLATGN 488
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPA 548
Query: 543 STPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + ++ + +++ GME
Sbjct: 549 ETPEGQACGLVKNLSLMCYVSVGSPADPLIEFMINRGME 587
>A5C1N0_VITVI (tr|A5C1N0) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_12s0028g03770 PE=3 SV=1
Length = 1193
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 261/536 (48%), Gaps = 41/536 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P ++ D Y + FG
Sbjct: 34 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFLETIYK-ISFG 92
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V ++ K G
Sbjct: 93 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRII----------KKGH 140
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 141 D--LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSE 198
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 199 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSS 258
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 259 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQ 318
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 319 NQQVALDYIGKRGSTVGVTREKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 377
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 378 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVN- 436
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 437 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 495
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
GK+ R H SHWG +C TP+G+ CGLVKNL++ ++ + + + L+
Sbjct: 496 REGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 551
>F0ZFN5_DICPU (tr|F0ZFN5) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_46649 PE=3 SV=1
Length = 1169
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 259/560 (46%), Gaps = 54/560 (9%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F E GLV Q++S+++FI +Q D + + P + P + +VKFG
Sbjct: 30 YFQEKGLVRQQLDSFDEFIQNTMQEIIDESPPITLRPEAQHHPGQTQIQNTVSTFSVKFG 89
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P + Q + P AR++ +TY+A + V + V T K + ++ +
Sbjct: 90 QIYLSKPTAEIDGVSQQ---VTPNQARIRNLTYSAPLFVDITKTVMTGPKGKIEEQRRND 146
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEK------GDCDFDHGGYFLIKGAE 235
E G++P+M+ S C + EA G+C FD GGYF+I G+E
Sbjct: 147 E----------LLKRVFIGKVPIMLRSQYCMLYEATDRDLTTMGECPFDQGGYFVINGSE 196
Query: 236 KAFVAQEQLFLKKLWV-SNTPDWAIGYKSLNKR---------NRLILKLVGNSKFEEINN 285
K +AQE++ ++V +P Y + + + + LK++ N+ N
Sbjct: 197 KVLIAQEKMNNNHVYVFKKSPPSKYSYVAEIRSCQETGSRPTSTMYLKMLHNT-----NK 251
Query: 286 GEKVL--SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEK 343
G + ++ ++ +VPV I+F +LG +DK+I++ I Y D Q+ ++ +R + E+
Sbjct: 252 GPVGIKATIPYIKQDVPVIIVFRALGFVADKDILEHICYDFNDAQMMDL----MRPSLEE 307
Query: 344 CSGFRKGKNALHYMEEH--VKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYM 397
+ + AL Y+ + G + + E L + P S +KA + Y+
Sbjct: 308 SFVIQSQEVALDYLGKRGSTIGTREQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYI 367
Query: 398 VKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRD 457
V LLLA RR D+RD F NKR + F K + LQR ++ D++
Sbjct: 368 VHRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDKE 427
Query: 458 VRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQ 517
P + + IT+GL+ + +TG W K SGV L R T++ LRR
Sbjct: 428 FIP-SSAVKSKTITSGLKYSLATGNWGSS-KSGGTKSGVAQVLNRLTFASTLSHLRRLNT 485
Query: 518 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD- 576
+ GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S + + L+
Sbjct: 486 PIGREGKLAKPRQLHNTHWGIVCPSETPEGQACGLVKNLSMMSYISVGSASQPILEFLEE 545
Query: 577 ---CGMEELVDDTTTFLSKK 593
+EE+ D ++ F + K
Sbjct: 546 WTTENLEEISDLSSIFTATK 565
>B6K5Q5_SCHJY (tr|B6K5Q5) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_04030 PE=3
SV=1
Length = 1210
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 259/565 (45%), Gaps = 44/565 (7%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSK 106
+ E + + C +F+E+ L Q++S+++F+ +Q D L + Y
Sbjct: 7 QYNETLTQEDCWTVISSYFEENSLARQQLSSFDEFVQNTMQEIVDDDSTLTLD-QYAQHT 65
Query: 107 KGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQV 166
++ + + FG++ L RP A+ M P+ ARL+ +TY++ + V + +V
Sbjct: 66 GAQGDYTRRYEINFGQIYLSRPTM--TEADGSTTTMFPQEARLRNLTYSSPLYVDMRKKV 123
Query: 167 FTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------ 220
+ + G+E + G++P+M+ S C + +
Sbjct: 124 M---RAQDSNVPIGEEIWLTEEEDDEPSKVFI-GKIPIMLRSTFCILNGVSDSELYDLNE 179
Query: 221 CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI-- 271
C +D GGYF+I G+EK +AQE Q+F +K S A +L + +RLI
Sbjct: 180 CPYDQGGYFIINGSEKVIIAQERSAANIVQVF-RKAAPSPIAYVAEIRSALERGSRLISS 238
Query: 272 --LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQ 328
+KL+ S N+G+ + ++ ++ ++P+ ++F +LGV D++I++ I Y D Q
Sbjct: 239 MQIKLMARSTE---NSGQTIKATLPYIRSDIPIVVVFRALGVVPDRDILEHICYDPNDLQ 295
Query: 329 IQNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGS 384
+ + I +A D+ + GK K ++Y + L + P
Sbjct: 296 MLEMMKPCIEEAFVIQDKDVALDYIGKRGSTTGVTREKRLRY-----AHDILQKEMLPHI 350
Query: 385 SGL----NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHA 440
+ L RKA FL YMV +LL RR+ D+RD F KR ++ F
Sbjct: 351 TTLEGFETRKAFFLGYMVHRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFKKM 410
Query: 441 RKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANL 500
+ + K +Q+ + +R+ + + ++ ITNGL+ + +TG W + L GV L
Sbjct: 411 TRDVYKYMQKCVETNREFN-LTLAVKSNTITNGLRYSLATGNWGDQKRGLANRVGVSQVL 469
Query: 501 GRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTG 560
R T++ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+
Sbjct: 470 NRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMS 529
Query: 561 LVST-NISESIFPQLLDCGMEELVD 584
VS + S I L + GME L D
Sbjct: 530 YVSVGSPSAPIIEFLEEWGMESLED 554
>F9F4K1_FUSOF (tr|F9F4K1) DNA-directed RNA polymerase OS=Fusarium oxysporum
(strain Fo5176) GN=FOXB_01326 PE=3 SV=1
Length = 1270
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 259/579 (44%), Gaps = 55/579 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GL S Q +S+++F +Q + + + + P+ G
Sbjct: 16 EGITPEDCWTVISSFFETKGLASQQTDSFDEFTQTMVQDLVNEYSTITLDQHNPPAPPGV 75
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAK--MKVTVEVQVF 167
N + +KFG V + RP + +LP R + +TYAA +K+T +V V
Sbjct: 76 NIALRRYEIKFGSVMVSRPSM--SETDGTVTNLLPYECRDRNLTYAAPTYLKITKKVSVA 133
Query: 168 TPHKV---------RSDKFKTGK----------EDYXXXXXXXXXXXXXXXGRLPVMVMS 208
++ +++ +TG+ ED G++P+MV S
Sbjct: 134 VDKEIPLHEMDDEQQAEYKRTGENPTKLVWEVEEDAGSIKAEDEPSEMIFIGKMPIMVKS 193
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 194 KICHLSSHSDEDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPYT 252
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI +KL G G+ + ++ F+ ++PV I+F +LGV
Sbjct: 253 YTAEIRSALEKGSRLISSLTMKLYGKGDSARGGFGQTIQATLPFVKADLPVAIVFRALGV 312
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVK 362
SD++I++ I Y D+Q+ + I +A D + + G R ++ E K
Sbjct: 313 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQASLGRE--K 370
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++ +E L ++ RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 371 RVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRL 429
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ +S L+R + +R+ + + S ++NGL+ + +TG
Sbjct: 430 DLAGPLLAKLFRGIIRRINTELSNYLKRCVESNRNFN-LTVAIKPSTLSNGLKYSLATGN 488
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPA 548
Query: 543 STPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + ++ + +++ GME
Sbjct: 549 ETPEGQACGLVKNLSLMCYVSVGSPADPLIEFMINRGME 587
>E9RHI6_9INSE (tr|E9RHI6) DNA-directed RNA polymerase OS=Pedetontus unimaculatus
GN=RPB2 PE=2 SV=1
Length = 1176
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 256/558 (45%), Gaps = 53/558 (9%)
Query: 46 KELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPS 105
+E+ D+ + C +FDE GLV Q++S+++FI +Q + +++ +
Sbjct: 15 EEVSSDLWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPQIDLQAEAQHT 74
Query: 106 KKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQ 165
G+ E+ +KF ++ L +P W + M+P ARL+ +TY+A + V +
Sbjct: 75 S-GEIENPPRYLLKFEQIYLSKPTHW--EKDGAPTPMMPNEARLRNLTYSAPLYVDITKT 131
Query: 166 VFTPHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKG 219
V K D +T + G++P+M+ S C + E
Sbjct: 132 VV---KDGEDPIETQHQ-------------KTFIGKIPIMLRSTYCLLNGLTDRDLTELN 175
Query: 220 DCDFDHGGYFLIKGAEKAFVAQEQLFLKKLWVSNTPDWAIGYKS-----LNKRNRLILKL 274
+C D GGYF+I G+EK +AQE++ ++V + D YKS L +R L
Sbjct: 176 ECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTL 235
Query: 275 ------VGNSKFEEINNGEKVLSVY-FLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDT 327
G ++ + G+K++++ ++ E+P+ I+F +LG +D++I++ I Y +D
Sbjct: 236 WVNMLARGGQSVKKSSVGQKIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDP 295
Query: 328 QIQNIFFGSIRDA-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFP 382
++ + S+ +A F G+ A + + K I+Y E L + P
Sbjct: 296 EMMEMVKPSLDEAFVIQEQNVALNFIGGRGAKPGVTKE-KRIKYA-----REILQKEMLP 349
Query: 383 --GSSGL--NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFA 438
G S +KA FL YMV LLLA GRR+ D+RD + NKR + F
Sbjct: 350 HVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFK 409
Query: 439 HARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVA 498
+ K + Q+ ++ +D +E + IIT+GL+ + +TG W K + +GV
Sbjct: 410 NLMKEVRMYAQKFIDRGKDFN-LELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQ 468
Query: 499 NLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSV 558
L R T++ LRR + GK+ R H + WG +C TP+G GLVKNL++
Sbjct: 469 VLNRLTFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLAL 528
Query: 559 TGLVSTNISESIFPQLLD 576
+S S + L+
Sbjct: 529 MAYISVGSQPSPILEFLE 546
>M5X2K1_PRUPE (tr|M5X2K1) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000425mg PE=4 SV=1
Length = 1192
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 262/534 (49%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y +KFG
Sbjct: 32 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETTY-RIKFG 90
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V + K + T
Sbjct: 91 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVSKSIV--KKGHDGEEVTET 146
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 147 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 196
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 197 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTSSKGGSS 256
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 257 GQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQ 316
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 317 NQQVALDYIGKRGATVGVSREKRIKYA-KEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 375
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +++
Sbjct: 376 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKELN- 434
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 435 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 493
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 494 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 545
>G9FIK7_LENED (tr|G9FIK7) DNA-directed RNA polymerase OS=Lentinula edodes GN=rpb2
PE=3 SV=1
Length = 1228
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 261/559 (46%), Gaps = 40/559 (7%)
Query: 51 DMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDN 110
++ + C FF++ GLV Q++S+++F+ +Q D DL + D +
Sbjct: 31 EITQEDCWTVISSFFEQKGLVRQQLDSFDEFVQNTMQELVDENADL-ILDQQDQHSGREG 89
Query: 111 EHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFT-- 168
+ + ++FG++ L RP A+ + P+ ARL+ +TY+A + + ++ +V
Sbjct: 90 DMTRRYEIRFGQIYLSRPTV--TEADGSVVPVFPQEARLRNLTYSAPLYIEMKKKVMVGR 147
Query: 169 --PHKVRSD-KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD----- 220
P V D ++T +D G++P+M+ S C ++ D
Sbjct: 148 EDPDGVPGDMAWETENDD------GPENSTKVWIGKVPIMLRSTFCILRGLADQDLYDLN 201
Query: 221 -CDFDHGGYFLIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGY-----KSLNKRNRLI-- 271
C +D GGYF+I G+EK +AQE++ ++V + I + ++ K + I
Sbjct: 202 ECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPINFLAEIRSAVEKGGKTISQ 261
Query: 272 --LKLVGNSKFEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQI 329
+K+ + + N K ++ ++ V++P+W++F LGV SD++I++ I Y +D Q+
Sbjct: 262 FQVKMFHRGQERAMGNVMKA-TIPYIKVDIPIWVVFRGLGVISDRDILEHICYDMQDAQM 320
Query: 330 QNIFFGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECL-NLYLFPGS 384
+ I + D + + G K I+Y +E L ++ + GS
Sbjct: 321 LEMLKPCIDEGFVIQDREVALDFIGNRGTTTGLSREKRIRYAQEILQKEMLPHVSMAEGS 380
Query: 385 SGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRM 444
++KA F YM+ LLLA RR+ D+RD F KR ++ F K +
Sbjct: 381 E--SKKAFFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRMLFRKLTKDV 438
Query: 445 SKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTN 504
+ +Q+ + ++ + + ITNGL+ + +TG W K + +GV L R
Sbjct: 439 YRYMQKCVETHKEFN-LALAVKHQTITNGLKYSLATGNWGDQKKSMSSKAGVSQVLNRYT 497
Query: 505 PLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVST 564
T++ LRR + GK+ R H +HWG VC TP+G+ CGLVKNL++ +S
Sbjct: 498 YASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSCISV 557
Query: 565 -NISESIFPQLLDCGMEEL 582
+ S + L + G+E L
Sbjct: 558 GSYSAPVIEFLEEWGLESL 576
>R0H1I6_9BRAS (tr|R0H1I6) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10007021mg PE=4 SV=1
Length = 1188
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 261/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 33 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 91
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 92 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 147
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 148 QDFTKVFI----------GKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSE 197
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNK-RNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ + +NR + ++++ + + ++
Sbjct: 198 KVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSS 257
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 258 GQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQ 317
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y +E L ++ G +KA + Y+V
Sbjct: 318 NQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLP-HVGVGEHCETKKAYYFGYIVHR 376
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ ++V
Sbjct: 377 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN- 435
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 436 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 494
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 495 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 546
>J9N627_FUSO4 (tr|J9N627) DNA-directed RNA polymerase OS=Fusarium oxysporum f.
sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 /
NRRL 34936) GN=FOXG_10639 PE=3 SV=1
Length = 1270
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 259/579 (44%), Gaps = 55/579 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GL S Q +S+++F +Q + + + + P+ G
Sbjct: 16 EGITPEDCWTVISSFFETKGLASQQTDSFDEFTQTMVQDLVNEYSTITLDQHNPPAPPGV 75
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAK--MKVTVEVQVF 167
N + +KFG V + RP + +LP R + +TYAA +K+T +V V
Sbjct: 76 NIALRRYEIKFGSVMVSRPSM--SETDGTVTNLLPYECRDRNLTYAAPTYLKITKKVAVA 133
Query: 168 TPHKV---------RSDKFKTGK----------EDYXXXXXXXXXXXXXXXGRLPVMVMS 208
++ +++ +TG+ ED G++P+MV S
Sbjct: 134 VDKEIPLHEMDDEQQAEYKRTGENPTKLVWEVEEDAGSIKAEDEPSEMIFIGKMPIMVKS 193
Query: 209 DLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTP 255
+C + D C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 194 KICHLSSHSDEDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPYT 252
Query: 256 DWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGV 310
A +L K +RLI +KL G G+ + ++ F+ ++PV I+F +LGV
Sbjct: 253 YTAEIRSALEKGSRLISSLTMKLYGKGDSARGGFGQTIQATLPFVKADLPVAIVFRALGV 312
Query: 311 SSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHVK 362
SD++I++ I Y D+Q+ + I +A D + + G R ++ E K
Sbjct: 313 VSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQASLGRE--K 370
Query: 363 GIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRF 422
++ +E L ++ RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 371 RVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKKRL 429
Query: 423 XXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTGA 482
+ +S L+R + +R+ + + S ++NGL+ + +TG
Sbjct: 430 DLAGPLLAKLFRGIIRRINTELSNYLKRCVESNRNFN-LTVAIKPSTLSNGLKYSLATGN 488
Query: 483 WTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL 542
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 489 WGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPA 548
Query: 543 STPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + ++ + +++ GME
Sbjct: 549 ETPEGQACGLVKNLSLMCYVSVGSPADPLIEFMINRGME 587
>M1VVJ0_CLAPU (tr|M1VVJ0) DNA-directed RNA polymerase OS=Claviceps purpurea 20.1
GN=CPUR_03454 PE=3 SV=1
Length = 1261
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 262/581 (45%), Gaps = 57/581 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GLVS Q +S+++F +Q + + + + PS G
Sbjct: 18 EGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITLDQPNPPSAPGT 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVE 163
+ +KFG V + RP + +LP R + +TYA+ + KV+
Sbjct: 78 KIALRRYEIKFGTVMVSRPTI--SETDGTVTSLLPYECRDRNLTYASPLYINITKKVSAA 135
Query: 164 VQVFTP-HKV----RSDKFKTGKEDYXXXXXXXXXXXXXXXGR------------LPVMV 206
++ P H++ +++ KTG+ G+ LP+MV
Sbjct: 136 IEREVPLHEMDDAQQTEYAKTGENPTKLVWEEEETPEDDQAGKSEDWKNMVFVGKLPIMV 195
Query: 207 MSDLCWM-KEAEKG-----DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S +C + +E ++ +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 196 KSKICHLSRETDESLFTVNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSP 254
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSL 308
A +L K +RLI LKL G G+ + ++ F+ ++P+ I+F +L
Sbjct: 255 YTYTAEIRSALEKGSRLISSLQLKLYGKGDSARGGFGQTIHTTLPFVKSDLPIAIVFRAL 314
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEH 360
GV SD++I++ I Y D+Q+ + I +A D + + G R ++ E
Sbjct: 315 GVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQAGLGRE- 373
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
K ++ +E L ++ RKA FL YMV LL GRR+ D+RD F K
Sbjct: 374 -KRVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREADDRDHFGKK 431
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R + +S L+R + G+R + + ++NGL+ + +T
Sbjct: 432 RLDLAGPLLAKLFRGIVRRMNNELSNYLRRCVEGNRHFN-LAVGIKPGTLSNGLKYSLAT 490
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K + T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 491 GNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVC 550
Query: 541 FLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + SE + +++ GME
Sbjct: 551 PAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGME 591
>K4A4Z6_SETIT (tr|K4A4Z6) DNA-directed RNA polymerase OS=Setaria italica
GN=Si033950m.g PE=3 SV=1
Length = 1226
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 267/536 (49%), Gaps = 41/536 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P ++ + + + FG
Sbjct: 70 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHK-ISFG 128
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P A+ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 129 QIYLSKPMMT--EADGETATLFPKSARLRNLTYSAPLYVDVSYRVMK--KGHDCEEVTET 184
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM-KEAEK-----GDCDFDHGGYFLIKGAE 235
DY G++P+M+ S C + +++EK G+C +D GGYF+I G+E
Sbjct: 185 SDYPKVFI----------GKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSE 234
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 235 KVLIAQEKMSTNHVYVFKKRQPNKFSYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSS 294
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ ++P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 295 GQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQ 354
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 355 NQQVALDYIGKRGATVGVTREKRIKYA-KEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 413
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LL+ GRR D+RD + NKR ++ F + + +Q+ ++ ++V
Sbjct: 414 LLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN- 472
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W + R +GV L R T++ LRR +
Sbjct: 473 LQFAIKAKTITSGLKYSLATGNWGQANQAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 531
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
GK+ R H SHWG +C TP+G+ CGLVKNL++ ++ + + + L+
Sbjct: 532 REGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 587
>C7ZA30_NECH7 (tr|C7ZA30) DNA-directed RNA polymerase OS=Nectria haematococca
(strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI)
GN=NECHADRAFT_70495 PE=3 SV=1
Length = 1261
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 259/580 (44%), Gaps = 56/580 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GLVS Q +S+++F +Q + + +++ PS G
Sbjct: 19 EGITPEDCWTVISSFFESKGLVSQQTDSFDEFTQTTIQDLVNEYSVISLDQPNPPSPPGV 78
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVE 163
+ + +KFG V + RP + +LP R + +TYA+ + KV+V
Sbjct: 79 SIALRRYEIKFGSVMVSRPTI--SETDGTVTSLLPYECRDRNLTYASPLYIKITKKVSVA 136
Query: 164 VQVFTP-HKVRSDKF----KTGKEDYXXXXXXXXX-----------XXXXXXGRLPVMVM 207
V+ P H++ D+ +TG+ G+LP+MV
Sbjct: 137 VEKEVPLHEMDEDQQAEYKRTGENPTKLVWELEESGDDEGKADDSWKDMVFVGKLPIMVK 196
Query: 208 SDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNT 254
S +C + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 197 SKICHLSSEHDDNLFLVNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSPY 255
Query: 255 PDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLG 309
A +L K +RLI LKL G G+ + ++ F+ ++PV I+F +LG
Sbjct: 256 TYTAEIRSALEKGSRLISSMMLKLYGKGDSARGGFGQTIHTTLPFVKADLPVAIVFRALG 315
Query: 310 VSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEHV 361
V SD++I++ I Y D+Q+ + I +A D + + G R ++ E
Sbjct: 316 VVSDEDILNHICYDRTDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQAGLGRE-- 373
Query: 362 KGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKR 421
K ++ +E L ++ RKA FL YMV LL GRR+ D+RD F KR
Sbjct: 374 KRVRVAKDILQKETLP-HISQSEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKKR 432
Query: 422 FXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFSTG 481
+ +S L+R + G+R + + ++NGL+ + +TG
Sbjct: 433 LDLAGPLLAKLFRGIVRRMNTELSNYLKRCVEGNRHFN-LAVGIKPGTLSNGLKYSLATG 491
Query: 482 AWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCF 541
W K T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 492 NWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCP 551
Query: 542 LSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + SE + +++ GME
Sbjct: 552 AETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGME 591
>Q6CAD6_YARLI (tr|Q6CAD6) DNA-directed RNA polymerase OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=YALI0D03718g PE=3 SV=1
Length = 1229
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 254/556 (45%), Gaps = 44/556 (7%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C FF+E GLVS Q++S+++FI +Q L + + DN++ ++
Sbjct: 21 CWTVISSFFNEKGLVSQQLDSFDEFIETTIQELVWEDRTLILDQPAQHTTPNDNQNKRFE 80
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVF----TPHKV 172
+ FGK+ L RP A+ M P+ AR + +TY++ + V ++ +V P +
Sbjct: 81 -ITFGKIYLSRPTM--TEADGSTHPMYPQEARARNLTYSSPLYVDMKKRVLFSIDDPARP 137
Query: 173 RSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHG 226
+D G++P+M+ S C ++ + D C +D G
Sbjct: 138 EADVVWN-----PIPGEVEEPVSKVYIGKVPIMLRSKFCILRGLRENDLYELNECPYDQG 192
Query: 227 GYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLNKRNRLI----LKLV 275
GYF+I G+EK +AQE Q+F KK S A ++ K +RLI +K+
Sbjct: 193 GYFVINGSEKVLIAQERSAANIVQVF-KKAAPSPISHVAEIRSAVEKGSRLISSMQIKMF 251
Query: 276 GNSKFEEINNGEKVL--SVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIF 333
G S + G + ++ ++ ++P+ ++F +LGV D +I++ I Y N D Q+ +
Sbjct: 252 GRS-----DKGPVTIKAALPYVRADIPIVVVFRALGVVPDGDILEHICYDNNDWQMLEML 306
Query: 334 FGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNR 389
I +A D + + G+ + ++Y +E L ++ R
Sbjct: 307 KPCIEEAFVIQDREVALDYIGRRGSAVGVNRERRVRYARDILQKELLP-HITQEEGFETR 365
Query: 390 KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQ 449
KA FL YMV +LL GR++ D+RD F KR ++ F K + + +
Sbjct: 366 KAYFLGYMVHRMLLVALGRKEPDDRDHFGKKRLDLAGPLMAGIFRMLFKKLTKDIYRYML 425
Query: 450 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 509
+ + ++D + + ++ ITNGL+ + +TG W K + +GV L R T+
Sbjct: 426 KCVETNKDFN-LTLAVKSNTITNGLKYSLATGNWGDQKKAMSSRAGVSQVLNRYTFASTL 484
Query: 510 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISES 569
+ LRRT + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S
Sbjct: 485 SHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTPSF 544
Query: 570 IFPQLLD-CGMEELVD 584
LD GME L D
Sbjct: 545 PIINFLDEWGMEPLED 560
>I1L1L2_SOYBN (tr|I1L1L2) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1192
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 261/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 35 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 93
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 94 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVSKRVI--KKGHDGEEVTEA 149
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 150 QDFTKVFI----------GKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 199
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 200 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSS 259
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y TQ+ + S+ +A
Sbjct: 260 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQ 319
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 320 NQQVALDYIGKRGATVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 378
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 379 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN- 437
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 438 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 496
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 497 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 548
>I3ESM3_NEMP1 (tr|I3ESM3) DNA-directed RNA polymerase OS=Nematocida parisii
(strain ERTm1 / ATCC PRA-289) GN=NEPG_00406 PE=3 SV=1
Length = 1137
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 247/528 (46%), Gaps = 53/528 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C K FF E GLV Q++S+N+FI + +Q D + V ++ P+ G+ E +
Sbjct: 9 CWKVVSAFFKEKGLVRQQLDSFNEFIQSTMQEVVDENSKI-VLLAHSPT--GEEEQARKY 65
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKV-TVEVQVFTPHKVRSD 175
T++F ++ + +P + + M P AR++ +TY+A + + V+ + +V S
Sbjct: 66 TIEFKQIYVSKPPTIT-EPDGRTSSMFPNDARVRSLTYSASLYIDIVKTEHIGDEEVESR 124
Query: 176 KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYF 229
+K G +P+M+ S C + D C +D GGYF
Sbjct: 125 SYK-----------------KMPIGSIPIMLRSLYCVYSNTDDRDMNRIEECTYDQGGYF 167
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS---------LNKRNRLILKLVGNSK 279
++ G+EK +A E++ +++ +P Y + L + L ++LV +
Sbjct: 168 IVNGSEKVLIAHERMASNLVYIFKKSPPSPYLYTAEMRSVPDHGLRLPSSLTIRLVSRAS 227
Query: 280 FEEINNGEKVLSVYF--LGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ + G +L ++VPV ++F +LG SDKEI++ I Y DT++ ++ SI
Sbjct: 228 -DSASGGGYLLRALLPHAKLDVPVVVIFRALGFVSDKEILEHICYDFSDTEMLSMLRPSI 286
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY---LFP--GSSGL--NRK 390
+A + AL Y+ + V + + ++ +L+ P G+ +K
Sbjct: 287 EEA----FVIQDQGVALDYIGKRVAPAGFSKEKRIKFAKDLFQKEFLPHVGTKEFCETKK 342
Query: 391 ARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQR 450
A Y + LL+ GRR ++RD + KR ++ F ++K +QR
Sbjct: 343 AYLFGYTINKLLMVALGRRSEEDRDHYGRKRLDLAGPLMTGLFRMLFKKMSNELAKYMQR 402
Query: 451 DLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMA 510
++G++D+ I L S +TNGL+ + +TG W K ++ +GV L R N + T++
Sbjct: 403 CIDGNKDLNLIVG-LRTSTLTNGLRYSLATGNWGEQSKSMQARAGVAQVLNRYNYISTLS 461
Query: 511 ELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSV 558
LRR + GK+ R H SHWG VC TP+G+ CGLVKN ++
Sbjct: 462 HLRRVNTPIGRDGKLAKPRQLHSSHWGMVCPAETPEGQACGLVKNFAL 509
>I3EHD3_NEMP3 (tr|I3EHD3) DNA-directed RNA polymerase OS=Nematocida parisii
(strain ERTm3) GN=NEQG_01320 PE=3 SV=1
Length = 1137
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 247/528 (46%), Gaps = 53/528 (10%)
Query: 57 CTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYA 116
C K FF E GLV Q++S+N+FI + +Q D + V ++ P+ G+ E +
Sbjct: 9 CWKVVSAFFKEKGLVRQQLDSFNEFIQSTMQEVVDENSKI-VLLAHSPT--GEEEQARKY 65
Query: 117 TVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKV-TVEVQVFTPHKVRSD 175
T++F ++ + +P + + M P AR++ +TY+A + + V+ + +V S
Sbjct: 66 TIEFKQIYVSKPPTIT-EPDGRTSSMFPNDARVRSLTYSASLYIDIVKTEHIGDEEVESR 124
Query: 176 KFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKEAEKGD------CDFDHGGYF 229
+K G +P+M+ S C + D C +D GGYF
Sbjct: 125 SYK-----------------KMPIGSIPIMLRSLYCVYSNTDDRDMNRIEECTYDQGGYF 167
Query: 230 LIKGAEKAFVAQEQLFLKKLWV-SNTPDWAIGYKS---------LNKRNRLILKLVGNSK 279
++ G+EK +A E++ +++ +P Y + L + L ++LV +
Sbjct: 168 IVNGSEKVLIAHERMASNLVYIFKKSPPSPYLYTAEMRSVPDHGLRLPSSLTIRLVSRAS 227
Query: 280 FEEINNGEKVLSVYF--LGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSI 337
+ + G +L ++VPV ++F +LG SDKEI++ I Y DT++ ++ SI
Sbjct: 228 -DSASGGGYLLRALLPHAKLDVPVVVIFRALGFVSDKEILEHICYDFSDTEMLSMLRPSI 286
Query: 338 RDADEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLY---LFP--GSSGL--NRK 390
+A + AL Y+ + V + + ++ +L+ P G+ +K
Sbjct: 287 EEA----FVIQDQGVALDYIGKRVAPAGFSKEKRIKFAKDLFQKEFLPHVGTKEFCETKK 342
Query: 391 ARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQR 450
A Y + LL+ GRR ++RD + KR ++ F ++K +QR
Sbjct: 343 AYLFGYTINKLLMVALGRRSEEDRDHYGRKRLDLAGPLMTGLFRMLFKKMSNELAKYMQR 402
Query: 451 DLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMA 510
++G++D+ I L S +TNGL+ + +TG W K ++ +GV L R N + T++
Sbjct: 403 CIDGNKDLNLIVG-LRTSTLTNGLRYSLATGNWGEQSKSMQARAGVAQVLNRYNYISTLS 461
Query: 511 ELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSV 558
LRR + GK+ R H SHWG VC TP+G+ CGLVKN ++
Sbjct: 462 HLRRVNTPIGRDGKLAKPRQLHSSHWGMVCPAETPEGQACGLVKNFAL 509
>I1MHA4_SOYBN (tr|I1MHA4) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1193
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 259/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 35 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 93
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K G+
Sbjct: 94 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVSKRVV-------KKGHDGE 144
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
E G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 145 E-----VTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 199
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 200 KVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSS 259
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DT + + S+ +A
Sbjct: 260 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQ 319
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 320 NQQVALDYIGKRGATVGVTKEKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 378
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 379 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN- 437
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 438 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 496
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 497 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 548
>I7IFS2_BABMI (tr|I7IFS2) DNA-directed RNA polymerase OS=Babesia microti strain
RI GN=BBM_I02860 PE=3 SV=1
Length = 1202
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 248/549 (45%), Gaps = 47/549 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
FF HGLV QI S++ F+ +Q D + + + P + + E +KFG++
Sbjct: 50 FFKTHGLVHQQIESFDDFVTYRMQEIVDEYPPIEIRPQPQYRPEDEIEVNVIYKLKFGQL 109
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGKED 183
+L+RP + P+ ARL+ +TY++++ V ++ +++ + + + +
Sbjct: 110 SLNRPSV--DEKEGVTKHIWPQEARLRNLTYSSQIYVDIDQEIYIYDEAKGQETLQDRTS 167
Query: 184 YXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAEKA 237
Y G++P+M+ S CW + A+ G+C +D GGYF++ G E+
Sbjct: 168 YPRISL----------GKIPMMLKSMYCWTRNVSEDDLADIGECPYDQGGYFIVGGGERV 217
Query: 238 FVAQEQL-------FLKKL-----WVS---NTPDWAIGYKSLN---KRNRLILKLVGNSK 279
+AQE++ F KK WV+ + +++ G + + K + ++GN +
Sbjct: 218 LIAQERMANNFIYVFKKKQPSKFSWVAEIRSQMEYSQGTSAFSIKMKAKQATANVIGN-R 276
Query: 280 FEEINNGEKVLSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRD 339
F + + V ++ ++ ++PV ILF +LG +DK+I+ I Y +D Q+ N+ ++ D
Sbjct: 277 FRSYD--QLVATLPYIRTDIPVAILFRALGCVADKDILQRIAYDFDDKQMLNLMKPTLED 334
Query: 340 A-----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFL 394
A + C F GK K IQY +E L ++ ++K F+
Sbjct: 335 ALDFTTQDACLDF-IGKRGPTVGAPRDKRIQYAKDLLRKEVLP-HVGTELGVESKKCYFI 392
Query: 395 AYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNG 454
YMV LLLA GR D+RD F KR F K + LQ ++
Sbjct: 393 GYMVHRLLLAKLGRINQDDRDHFGKKRLDMAGPLMASSFGTLFRKMAKDAKRILQHQIDC 452
Query: 455 DRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRR 514
R AS IT GLQ TG W +GV L R ++ LRR
Sbjct: 453 GRTFDVAGAIRSASQITQGLQYQLLTGNWGKDRDGKVVRTGVSQVLNRLTFASCLSHLRR 512
Query: 515 TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
+ GK+ R H +HWG +C TP+G+ GLVKNL++ +S + S +L
Sbjct: 513 LNTPLGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCSISVGGASSTICEL 572
Query: 575 L-DCGMEEL 582
L + GM+ L
Sbjct: 573 LTELGMDSL 581
>K7THS3_NEOAO (tr|K7THS3) DNA-directed RNA polymerase OS=Neotyphodium aotearoae
GN=rpbB PE=3 SV=1
Length = 1261
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 264/581 (45%), Gaps = 57/581 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GLVS Q +S+++F +Q + + + + PS G
Sbjct: 18 EGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITLDQPNPPSPPGM 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVE 163
+ +KFG V + RP + +LP R + +TYA+ + KV+
Sbjct: 78 KIALRRYEIKFGTVMVSRPTI--SETDGTVTSLLPYECRDRNLTYASPLYINITKKVSAA 135
Query: 164 VQVFTP-HKV----RSDKFKTGKEDYXXXXXXXXXXXXXXXGR------------LPVMV 206
++ P H++ +++ KTG+ G+ LP+MV
Sbjct: 136 IEREVPLHEMDDAQQAEYAKTGENPTKLIWEQEESPEDDEAGKSEDWKNMVFVGKLPIMV 195
Query: 207 MSDLCWM-KEAEKG-----DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S +C + +E ++ +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 196 KSKICHLSRETDESLFMVNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSP 254
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSL 308
A +L K +RLI LKL G G+ + ++ F+ ++P+ I+F +L
Sbjct: 255 FTYTAEIRSALEKGSRLISSLQLKLYGKGDSARGGFGQTIHTTLPFVKSDLPIAIVFRAL 314
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEH 360
GV SD++I++ I Y +D+Q+ + I +A D + + G R ++ E
Sbjct: 315 GVVSDEDILNHICYDRKDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQAGLGRE- 373
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
K ++ +E L ++ RKA FL YMV LL GRR+ D+RD F K
Sbjct: 374 -KRVRVAKDILQKETLP-HISQTEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKK 431
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R + +S L+R + G+R + + + ++NGL+ + +T
Sbjct: 432 RLDLAGPLLAKLFRGIVRRMNNELSNYLRRCVEGNRHFN-LAVGIKPATLSNGLKYSLAT 490
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K + T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 491 GNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVC 550
Query: 541 FLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + SE + +++ GME
Sbjct: 551 PAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGME 591
>L7JX25_TRAHO (tr|L7JX25) DNA-directed RNA polymerase (Fragment)
OS=Trachipleistophora hominis GN=THOM_1048 PE=3 SV=1
Length = 1381
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 246/554 (44%), Gaps = 52/554 (9%)
Query: 51 DMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDN 110
++ + C A FD++GLV Q++S+N+FI +Q D L V K
Sbjct: 193 EITEEDCWTAISSHFDQYGLVRQQLDSFNEFIETTMQEIIDENNTLIVQSIPSAGK---- 248
Query: 111 EHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPH 170
E + +KFG++ + +P + + + P ARL+ +TYA + V V V +
Sbjct: 249 ESVQKIILKFGQIYISKPPVIT-EQDGKTSTLFPCEARLRDLTYACPLYVDVTKSVVE-N 306
Query: 171 KVRSDKFKTGKEDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM------KEAEKGDCDFD 224
+ D F G +PVM+ S C + E G+C +D
Sbjct: 307 EESDDHF----------------YRQVPIGLVPVMLRSSCCILHGLSDKNLTELGECPYD 350
Query: 225 HGGYFLIKGAEKAFVAQEQL-------FLKKL--WVSNTPDWAIGYKSLNKRNRLILKLV 275
GGYF+I G+EK +AQE++ F K L + + K + LI+KLV
Sbjct: 351 QGGYFVINGSEKVLIAQERMATNVVHVFEKSLATYTHYAEIRSAPQKGSKTPSALIVKLV 410
Query: 276 GNSKFEEINNGEKVLSVYFLGV--EVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIF 333
++ E +L GV ++PV +++ +LG SDKEI++ + Y D ++ +
Sbjct: 411 KKTE------TEFLLRATLPGVRQDIPVIVIYRALGFVSDKEIMEHLIYDPNDKEMLQVI 464
Query: 334 FGSIRDA----DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNR 389
SI +A D+ + GK + K IQ+ + E L ++ R
Sbjct: 465 RPSIEEAFVIQDQNVALDYIGKRSAPAGSPREKRIQFAKDILIREFLP-HIGDKQFCETR 523
Query: 390 KARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQ 449
KA F YM++ LL R D+RD + KR KV F + K +Q
Sbjct: 524 KAFFFGYMIQRLLNCAMKRVSPDDRDHYGKKRMDLAGPLLAQLFKVLFRKLCQETIKHMQ 583
Query: 450 RDLNGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTM 509
+ + RD I L SIIT G + + +TG W + ++ +GV L R N + T+
Sbjct: 584 KCIENKRDFN-IALGLKTSIITQGFRYSLATGNWGEQSRAMQTKAGVAQVLNRYNFISTL 642
Query: 510 AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNIS-E 568
+ LRR + GK+ R H +HWG VC TP+G+ CGLVKNLS+ +S N E
Sbjct: 643 SHLRRVNSPMGREGKLAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLLAYISVNHPIE 702
Query: 569 SIFPQLLDCGMEEL 582
I L + G++ L
Sbjct: 703 GIVELLEEFGLKSL 716
>F0XDY2_GROCL (tr|F0XDY2) DNA-directed RNA polymerase OS=Grosmannia clavigera
(strain kw1407 / UAMH 11150) GN=CMQ_1555 PE=3 SV=1
Length = 1266
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 259/577 (44%), Gaps = 72/577 (12%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKFGKV 123
+FD+ LVS QI+S+N+F +Q+ D L + S P + +KFG +
Sbjct: 36 YFDKKSLVSQQIDSFNEFTTTTVQSLIDEHSLLTLDQSNPPIASDRPVKLRRYEIKFGNI 95
Query: 124 TLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVEVQVFTPHKVRSDKF---- 177
+ +P+F G + P R + +TY+ + ++T +V + + D+
Sbjct: 96 MVSKPQFAEGDGRVS--TLTPYECRDRNLTYSCPIYARITKKVSLAVDEPIPDDELDEEQ 153
Query: 178 -----KTGKE--------------DYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMK-EAE 217
+TG++ DY GRLP+MV S +C + E E
Sbjct: 154 IEEMQRTGEQPTRIVWEEEPSDLPDYEKDKADEDMKDMVFMGRLPIMVKSKICHLAYEDE 213
Query: 218 KG-----DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSNTPDWAIGYKSLN 265
G +C +D GGYF+I G+EK +AQE Q+F KK S A +L
Sbjct: 214 DGLFLLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-KKAQPSKFSYTAEIRSALE 272
Query: 266 KRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLI 320
K +RLI + LV + G+ V ++ ++ E+P+ ++F +LGV SD++I++ I
Sbjct: 273 KGSRLISSLSIMLVAKGDTGRGSFGQTVHTTLPYIKSELPIAVVFRALGVVSDEDILNHI 332
Query: 321 DYGNEDTQIQNIFFGSIRDA-----DEKCSGF--RKGKNALHYMEEHVKGIQYPPSESME 373
Y D+Q+ + I +A E F ++G+N+ H + + +
Sbjct: 333 CYDRNDSQMLEMLRPCIEEAFCIQDREVALDFIGKRGQNS-HGISRKDR------VRAAR 385
Query: 374 ECLNLYLFP---GSSGL-NRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNKRFXXXXXXX 429
+ L + P S G RKA FL YMV LL GRR D+RD F KR
Sbjct: 386 DILQKEMLPHISQSEGCETRKAFFLGYMVHKLLQCALGRRDVDDRDHFGKKRLDLAGSLL 445
Query: 430 XXXXKVHFAHARKRMSKALQRDLNGDR--DVRP-IEHYLDASIITNGLQRAFSTGAWTHP 486
+ + + L+R ++ + D+R I H +TNGL+ + +TG W
Sbjct: 446 AKLFRGIIRKMYQELMNHLKRCVDTGKHFDLRVGIRH----QTLTNGLKYSLATGNWGDQ 501
Query: 487 YKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 546
K + T+GV L R T++ LRRT + GK+ R H +HWG VC TP+
Sbjct: 502 KKAMSSTAGVSQVLNRYTFSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPE 561
Query: 547 GENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
G+ CGLVKNLS+ VS +E I ++ ME L
Sbjct: 562 GQACGLVKNLSLMCYVSVGTPAEPIVEFMIARNMEVL 598
>I1GQ05_BRADI (tr|I1GQ05) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G13720 PE=3 SV=1
Length = 1228
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 265/536 (49%), Gaps = 41/536 (7%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P ++ + + + FG
Sbjct: 72 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHK-ISFG 130
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P A+ + + P+ ARL+ +TY+A + V V +V K G
Sbjct: 131 QIYLSKPMMT--EADGETATLFPKSARLRNLTYSAPLYVDVSYRVV----------KKGH 178
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWM-KEAEK-----GDCDFDHGGYFLIKGAE 235
+ G++P+M+ S C + +++EK G+C +D GGYF+I G+E
Sbjct: 179 D--CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSE 236
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 237 KVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSS 296
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ ++P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 297 GQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQ 356
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 357 NQQVALDYIGKRGATVGVTREKRIKYA-KEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 415
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LL+ GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 416 LLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVN- 474
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W + R +GV L R T++ LRR +
Sbjct: 475 LQFAIKAKTITSGLKYSLATGNWGQANQAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 533
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLD 576
GK+ R H SHWG +C TP+G+ CGLVKNL++ ++ + + + L+
Sbjct: 534 REGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 589
>B9H2V2_POPTR (tr|B9H2V2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_198024 PE=2 SV=1
Length = 690
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 260/534 (48%), Gaps = 35/534 (6%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 24 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 82
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 83 QIYLSKPMM--TESDGETATLFPKAARLRNLTYSAPLYVDVTKRVI--KKGHDGEEVTET 138
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ +P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 139 QDFTKVFIGKASIMNYLF--VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSE 196
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSL-NKRNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ +NR + ++++ + + ++
Sbjct: 197 KVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSAKGGSS 256
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 257 GQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQ 316
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
+++ + GK K I+Y E +++ + ++ G +KA + Y++
Sbjct: 317 NQQVALDYIGKRGATVGVTREKRIKYA-KEILQKEMLPHVGVGEYCETKKAYYFGYIIHR 375
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ +DV
Sbjct: 376 LLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVN- 434
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 435 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 493
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 494 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 545
>L7IUN9_MAGOR (tr|L7IUN9) DNA-directed RNA polymerase OS=Magnaporthe oryzae P131
GN=OOW_P131scaffold01370g10 PE=3 SV=1
Length = 1276
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 261/593 (44%), Gaps = 67/593 (11%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV-TPSYDPS 105
E +++ C +FDE GLVS QI+SYN+F + +Q D + L + P+ +
Sbjct: 21 ENDDEITAEDCWNVISSYFDEKGLVSQQIDSYNEFTTSTIQGIVDEYSVLTLDNPNPPDT 80
Query: 106 KKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVE 163
+G + + G + + +P + + ++P R + +TY+ + K+T +
Sbjct: 81 FEGKPIRLRRYEIMLGNILVTQPTV--KETDGKVSTLVPYECRDRNLTYSCPLYVKLTKK 138
Query: 164 VQVFT-----------------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXG 200
V V P +R + + + G
Sbjct: 139 VNVAVEEDIPLHELNDEQREEMQRTNEHPTTIRWELDRDKSHNPDEKISGEKMADMIYIG 198
Query: 201 RLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLK 247
++PVMV S +C+++ + + C +D GGYF+I G+EK +AQE Q+F K
Sbjct: 199 KIPVMVKSRICYLRSQPESELFLLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-K 257
Query: 248 KLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVW 302
K + A +L K +RL+ +KL + G+ + L++ + ++P+
Sbjct: 258 KAQPNKYLYQAEIRSALEKGSRLVSTLTMKLTSKGDSTRGSFGQTIHLNLPYTSGDLPIA 317
Query: 303 ILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNAL 354
I+F +LGV SD++I++ I DTQ+ + SI +A D + + R GK+
Sbjct: 318 IVFRALGVVSDEDILNHIVLDKNDTQMLEMLRPSIEEAFCIQDREVALDFIAKRVGKDGG 377
Query: 355 HYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRK 410
H H++ + + L P S RKA FL YMV +L GRR
Sbjct: 378 HSNSRHLR------LKVARDILQKDTLPHISQAEGCETRKAFFLGYMVHKILQCALGRRD 431
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
D+RD F KR + M L+R ++ RD + L + +
Sbjct: 432 VDDRDHFGKKRLDLAGPLLAKLFRGIIRKLTNDMMGGLRRCIDAGRDF-DLTASLKPNTL 490
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL+ + +TG W K T+GV L R T++ LRRT + GK+ R
Sbjct: 491 TNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ 550
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
H +HWG VC TP+G+ CGLVKNLS+ +VS +E I+ L+ GM+ L
Sbjct: 551 LHNTHWGLVCPAETPEGQACGLVKNLSLMCMVSVGTPAEPIYDFLVARGMDVL 603
>L7HUN2_MAGOR (tr|L7HUN2) DNA-directed RNA polymerase OS=Magnaporthe oryzae Y34
GN=OOU_Y34scaffold00751g11 PE=3 SV=1
Length = 1276
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 261/593 (44%), Gaps = 67/593 (11%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV-TPSYDPS 105
E +++ C +FDE GLVS QI+SYN+F + +Q D + L + P+ +
Sbjct: 21 ENDDEITAEDCWNVISSYFDEKGLVSQQIDSYNEFTTSTIQGIVDEYSVLTLDNPNPPDT 80
Query: 106 KKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVE 163
+G + + G + + +P + + ++P R + +TY+ + K+T +
Sbjct: 81 FEGKPIRLRRYEIMLGNILVTQPTV--KETDGKVSTLVPYECRDRNLTYSCPLYVKLTKK 138
Query: 164 VQVFT-----------------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXG 200
V V P +R + + + G
Sbjct: 139 VNVAVEEDIPLHELNDEQREEMQRTNEHPTTIRWELDRDKSHNPDEKISGEKMADMIYIG 198
Query: 201 RLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLK 247
++PVMV S +C+++ + + C +D GGYF+I G+EK +AQE Q+F K
Sbjct: 199 KIPVMVKSRICYLRSQPESELFLLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-K 257
Query: 248 KLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVW 302
K + A +L K +RL+ +KL + G+ + L++ + ++P+
Sbjct: 258 KAQPNKYLYQAEIRSALEKGSRLVSTLTMKLTSKGDSTRGSFGQTIHLNLPYTSGDLPIA 317
Query: 303 ILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNAL 354
I+F +LGV SD++I++ I DTQ+ + SI +A D + + R GK+
Sbjct: 318 IVFRALGVVSDEDILNHIVLDKNDTQMLEMLRPSIEEAFCIQDREVALDFIAKRVGKDGG 377
Query: 355 HYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRK 410
H H++ + + L P S RKA FL YMV +L GRR
Sbjct: 378 HSNSRHLR------LKVARDILQKDTLPHISQAEGCETRKAFFLGYMVHKILQCALGRRD 431
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
D+RD F KR + M L+R ++ RD + L + +
Sbjct: 432 VDDRDHFGKKRLDLAGPLLAKLFRGIIRKLTNDMMGGLRRCIDAGRDF-DLTASLKPNTL 490
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL+ + +TG W K T+GV L R T++ LRRT + GK+ R
Sbjct: 491 TNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ 550
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
H +HWG VC TP+G+ CGLVKNLS+ +VS +E I+ L+ GM+ L
Sbjct: 551 LHNTHWGLVCPAETPEGQACGLVKNLSLMCMVSVGTPAEPIYDFLVARGMDVL 603
>G4MR84_MAGO7 (tr|G4MR84) DNA-directed RNA polymerase OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_04714
PE=3 SV=1
Length = 1276
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 261/593 (44%), Gaps = 67/593 (11%)
Query: 47 ELGEDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV-TPSYDPS 105
E +++ C +FDE GLVS QI+SYN+F + +Q D + L + P+ +
Sbjct: 21 ENDDEITAEDCWNVISSYFDEKGLVSQQIDSYNEFTTSTIQGIVDEYSVLTLDNPNPPDT 80
Query: 106 KKGDNEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM--KVTVE 163
+G + + G + + +P + + ++P R + +TY+ + K+T +
Sbjct: 81 FEGKPIRLRRYEIMLGNILVTQPTV--KETDGKVSTLVPYECRDRNLTYSCPLYVKLTKK 138
Query: 164 VQVFT-----------------------PHKVRSDKFKTGKEDYXXXXXXXXXXXXXXXG 200
V V P +R + + + G
Sbjct: 139 VNVAVEEDIPLHELNDEQREEMQRTNEHPTTIRWELDRDKSHNPDEKISGEKMADMIYIG 198
Query: 201 RLPVMVMSDLCWMKEAEKGD------CDFDHGGYFLIKGAEKAFVAQE-------QLFLK 247
++PVMV S +C+++ + + C +D GGYF+I G+EK +AQE Q+F K
Sbjct: 199 KIPVMVKSRICYLRSQPESELFLLNECPYDQGGYFIINGSEKVLIAQERSAANIVQVF-K 257
Query: 248 KLWVSNTPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVW 302
K + A +L K +RL+ +KL + G+ + L++ + ++P+
Sbjct: 258 KAQPNKYLYQAEIRSALEKGSRLVSTLTMKLTSKGDSTRGSFGQTIHLNLPYTSGDLPIA 317
Query: 303 ILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNAL 354
I+F +LGV SD++I++ I DTQ+ + SI +A D + + R GK+
Sbjct: 318 IVFRALGVVSDEDILNHIVLDKNDTQMLEMLRPSIEEAFCIQDREVALDFIAKRVGKDGG 377
Query: 355 HYMEEHVKGIQYPPSESMEECLNLYLFPGSSGL----NRKARFLAYMVKSLLLAYTGRRK 410
H H++ + + L P S RKA FL YMV +L GRR
Sbjct: 378 HSNSRHLR------LKVARDILQKDTLPHISQAEGCETRKAFFLGYMVHKILQCALGRRD 431
Query: 411 CDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASII 470
D+RD F KR + M L+R ++ RD + L + +
Sbjct: 432 VDDRDHFGKKRLDLAGPLLAKLFRGIIRKLTNDMMGGLRRCIDAGRDF-DLTASLKPNTL 490
Query: 471 TNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARY 530
TNGL+ + +TG W K T+GV L R T++ LRRT + GK+ R
Sbjct: 491 TNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ 550
Query: 531 PHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNI-SESIFPQLLDCGMEEL 582
H +HWG VC TP+G+ CGLVKNLS+ +VS +E I+ L+ GM+ L
Sbjct: 551 LHNTHWGLVCPAETPEGQACGLVKNLSLMCMVSVGTPAEPIYDFLVARGMDVL 603
>C4PBI7_9HYPO (tr|C4PBI7) DNA-directed RNA polymerase OS=Epichloe festucae
GN=rpbB PE=3 SV=1
Length = 1261
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 263/581 (45%), Gaps = 57/581 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GLVS Q +S+++F +Q + + + + PS G
Sbjct: 18 EGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITLDQPNPPSPPGI 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVE 163
+ +KFG V + RP + +LP R + +TYA+ + KV+
Sbjct: 78 KIALRRYEIKFGTVMVSRPTI--SETDGTVTSLLPYECRDRNLTYASPLYINITKKVSAA 135
Query: 164 VQVFTP-HKV----RSDKFKTGKEDYXXXXXXXXX------------XXXXXXGRLPVMV 206
++ P H++ +++ KTG+ G+LP+MV
Sbjct: 136 IEREVPLHEMDDAQQAEYAKTGENPTKLIWEQEESPEDDDAGKSEDWKNMVFVGKLPIMV 195
Query: 207 MSDLCWM-KEAEKG-----DCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S +C + +E ++ +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 196 KSKICHLSRETDESLFMVNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSP 254
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSL 308
A +L K +RLI LKL G G+ + ++ F+ ++P+ I+F +L
Sbjct: 255 FTYTAEIRSALEKGSRLISSLQLKLYGKGDSARGGFGQTIHTTLPFVKSDLPIAIVFRAL 314
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEH 360
GV SD++I++ I Y +D+Q+ + I +A D + + G R ++ E
Sbjct: 315 GVVSDEDILNHICYDRKDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQAGLGRE- 373
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
K ++ +E L ++ RKA FL YMV LL GRR+ D+RD F K
Sbjct: 374 -KRVRVAKDILQKETLP-HISQTEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKK 431
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R + +S L+R + G+R + + ++NGL+ + +T
Sbjct: 432 RLDLAGPLLAKLFRGIVRRMNNELSNYLRRCVEGNRHFN-LAVGIKPGTLSNGLKYSLAT 490
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K + T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 491 GNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVC 550
Query: 541 FLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + SE + +++ GME
Sbjct: 551 PAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGME 591
>L2GKH9_VITCO (tr|L2GKH9) DNA-directed RNA polymerase II subunit RPB2
OS=Vittaforma corneae (strain ATCC 50505) GN=VICG_01974
PE=3 SV=1
Length = 573
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 247/538 (45%), Gaps = 48/538 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNV--TPSYDPSKKGDNEHFKYATVKFG 121
+F++ GLV Q++S++QF+ +Q D + V TP+ S + +KFG
Sbjct: 26 YFEQKGLVRQQLDSFDQFVRVKMQEIVDENPQIIVQSTPTAGSSA------VRRMVIKFG 79
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ + +P + ++ + + P AR++ +TYA + + V K+ ++F G+
Sbjct: 80 QIYVTKPPVYT-ESDGRSITLYPSEARIRDLTYACNIYIDVT-------KIVENEF--GE 129
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
D G+LP+M+ S C + + G+C +D GGYF++ G+E
Sbjct: 130 RD-------EHKFSRTSLGQLPIMLRSSCCILHGLTEKDIVQIGECPYDQGGYFIVSGSE 182
Query: 236 KAFVAQEQLFLKKLWV--SNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKV-LSV 292
K VAQE++ + + + P Y + + + + N + S+
Sbjct: 183 KVIVAQERMASNTIHIFKKSQPAPYTHYSEIRSVPEKGSRTPSAFSIKVMRNPRVIRASL 242
Query: 293 YFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKN 352
+ ++P+ I++ +LG SD+EII I++ N+D + + + E+ S +
Sbjct: 243 PLVKQDIPIAIIYRALGFLSDREIISHINFDNDDA-----IYSFLAPSLEEASVVQDQLT 297
Query: 353 ALHYMEEHVKGIQYPPSESMEECLNLY---LFP--GSSGL--NRKARFLAYMVKSLLLAY 405
AL ++ + + P + ++ NL P G+ +KA FL YM+ L
Sbjct: 298 ALDFIGKRSAPVGSPRDKRVQFARNLLAKEFLPHIGTQEFCETKKAYFLGYMISKTLNVV 357
Query: 406 TGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYL 465
RR+ D+RD KR K+ F +K +Q+ + RD I +
Sbjct: 358 LDRREVDDRDHCGKKRMDLGGPLLASLFKMLFKKLCAETAKHMQKCIENSRDFN-IALGI 416
Query: 466 DASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKV 525
+S IT G + A +TG W + ++ +GV L R N L T++ LRR ++ GK+
Sbjct: 417 KSSTITQGFRYALATGNWGDQARAMQTRAGVAQVLNRYNFLSTLSHLRRVNTPIEKEGKL 476
Query: 526 GDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLL-DCGMEEL 582
R H +HWG +C TP+G CGLVKNLS+ +S S + ++L +CG+E L
Sbjct: 477 AKPRQLHNTHWGLICPAETPEGHACGLVKNLSLMAYISVGKSSAPIIEILEECGVERL 534
>D7MEQ0_ARALL (tr|D7MEQ0) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_492703 PE=3 SV=1
Length = 1188
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 260/534 (48%), Gaps = 43/534 (8%)
Query: 64 FFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTP--SYDPSKKGDNEHFKYATVKFG 121
+F+E GLV Q++S+++FI +Q D D+ + P ++P + D Y + FG
Sbjct: 33 YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYK-ISFG 91
Query: 122 KVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTGK 181
++ L +P ++ + + P+ ARL+ +TY+A + V V +V K + T
Sbjct: 92 QIYLSKPMMT--ESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIK--KGHDGEEVTET 147
Query: 182 EDYXXXXXXXXXXXXXXXGRLPVMVMSDLCWMKE------AEKGDCDFDHGGYFLIKGAE 235
+D+ G++P+M+ S C + + E G+C +D GGYF+I G+E
Sbjct: 148 QDFTKVFI----------GKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSE 197
Query: 236 KAFVAQEQLFLKKLWV-----SNTPDWAIGYKSLNK-RNR----LILKLVGNSKFEEINN 285
K +AQE++ ++V N + +S+ + +NR + ++++ + + ++
Sbjct: 198 KVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSS 257
Query: 286 GEKV-LSVYFLGVEVPVWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA---- 340
G+ + ++ ++ E+P+ I+F +LG +DK+I++ I Y DTQ+ + S+ +A
Sbjct: 258 GQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQ 317
Query: 341 DEKCSGFRKGKNALHYMEEHVKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKS 400
++ + GK K I+Y +E L ++ G +KA + Y++
Sbjct: 318 NQLVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLP-HVGIGEYCETKKAYYFGYIIHR 376
Query: 401 LLLAYTGRRKCDNRDDFRNKRFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRP 460
LLL GRR D+RD + NKR ++ F + + +Q+ ++ ++V
Sbjct: 377 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN- 435
Query: 461 IEHYLDASIITNGLQRAFSTGAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQ 520
++ + A IT+GL+ + +TG W R +GV L R T++ LRR +
Sbjct: 436 LQFAIKAKTITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIG 494
Query: 521 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLSVTGLVSTNISESIFPQL 574
GK+ R H S WG +C TP+G+ CGLVKNL++ +V + + +P L
Sbjct: 495 REGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLAL--MVYITVGSAAYPIL 546
>G9MQ39_HYPVG (tr|G9MQ39) DNA-directed RNA polymerase OS=Hypocrea virens (strain
Gv29-8 / FGSC 10586) GN=TRIVIDRAFT_76818 PE=3 SV=1
Length = 1261
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 258/581 (44%), Gaps = 57/581 (9%)
Query: 50 EDMVKHFCTKASRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGD 109
E + C FF+ GLVS Q +S+++F +Q + + + + PS G
Sbjct: 18 EGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNEYSTITLDQPNPPSPPGR 77
Query: 110 NEHFKYATVKFGKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKM------KVTVE 163
+ +KFG V + RP + +LP R + +TYA+ + KV+
Sbjct: 78 TIALRRYEIKFGSVMVSRPTI--SETDGTVTSLLPYECRDRNLTYASPLYIKITKKVSAA 135
Query: 164 VQVFTP-HKV----RSDKFKTGKEDYXXXXXXXXXXXXXXXGR------------LPVMV 206
V+ P H++ + + +TG+ G+ LP+MV
Sbjct: 136 VEREVPLHEMDDAQQEEYARTGEHPTKLEWEEEENGEDDNVGKSDDWKDMVFVGKLPIMV 195
Query: 207 MSDLCWMKEAEK------GDCDFDHGGYFLIKGAEKAFVAQE-------QLFLKKLWVSN 253
S +C + + +C +D GGYF+I G+EK +AQE Q+F KK S
Sbjct: 196 KSKICHLSREQDDSLFLVNECPYDQGGYFVINGSEKVLIAQERSAANIVQVF-KKAQPSA 254
Query: 254 TPDWAIGYKSLNKRNRLI----LKLVGNSKFEEINNGEKV-LSVYFLGVEVPVWILFFSL 308
A +L K +RLI LKL G G+ + ++ F+ ++PV I+F +L
Sbjct: 255 YTYTAEIRSALEKGSRLISSMMLKLYGKGDSARGGFGQTIHTTLPFVKSDLPVAIVFRAL 314
Query: 309 GVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDA----DEKCS----GFRKGKNALHYMEEH 360
GV SD++I++ I Y D+Q+ + I +A D + + G R ++ E
Sbjct: 315 GVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGNRDQAGLGRE- 373
Query: 361 VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK 420
K ++ +E L ++ RKA FL YMV LL GRR+ D+RD F K
Sbjct: 374 -KRVRVAKDILQKETLP-HISQTEGSETRKAFFLGYMVHKLLQCALGRREPDDRDHFGKK 431
Query: 421 RFXXXXXXXXXXXKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST 480
R + ++ L+R + G+R + + ++NGL+ + +T
Sbjct: 432 RLDLAGPLLAKLFRGIMRRMNTELANYLRRCVEGNRHFN-LAVGIKPGTLSNGLKYSLAT 490
Query: 481 GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC 540
G W K + T+GV L R T++ LRRT + GK+ R H +HWG VC
Sbjct: 491 GNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVC 550
Query: 541 FLSTPDGENCGLVKNLSVTGLVST-NISESIFPQLLDCGME 580
TP+G+ CGLVKNLS+ VS + SE + +++ GME
Sbjct: 551 PAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGME 591