Miyakogusa Predicted Gene

Lj1g3v1732300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1732300.1 tr|B9IBR2|B9IBR2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_823869 PE=4
SV=1,59.46,0.0002,seg,NULL; coiled-coil,NULL,CUFF.27727.1
         (66 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7KT39_SOYBN (tr|K7KT39) Uncharacterized protein OS=Glycine max ...    65   1e-08
K7KI27_SOYBN (tr|K7KI27) Uncharacterized protein OS=Glycine max ...    61   1e-07

>K7KT39_SOYBN (tr|K7KT39) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 66

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 36/66 (54%)

Query: 1  MGLCFGCFDGGNKRMTXXXXXXXXXXXXXXXXXXXXXXXXXXGGAKQPDMGKQPENSNNG 60
          MGLCFGCFDGGNKRMT                          G AKQP+  K+PENSNNG
Sbjct: 1  MGLCFGCFDGGNKRMTKEEERLASEEARARAAEAAQKKQEQQGEAKQPETVKEPENSNNG 60

Query: 61 EQFVKV 66
          E FVKV
Sbjct: 61 EAFVKV 66


>K7KI27_SOYBN (tr|K7KI27) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 66

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 35/66 (53%)

Query: 1  MGLCFGCFDGGNKRMTXXXXXXXXXXXXXXXXXXXXXXXXXXGGAKQPDMGKQPENSNNG 60
          MGLCFGC DGGNKRMT                          G AKQP+  K+PENS+NG
Sbjct: 1  MGLCFGCLDGGNKRMTKEEERLASEEARARAAEAAQKKLEQQGEAKQPETVKEPENSSNG 60

Query: 61 EQFVKV 66
          E FVKV
Sbjct: 61 EAFVKV 66