Miyakogusa Predicted Gene
- Lj1g3v0913110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0913110.1 tr|Q4A185|Q4A185_MEDTR Beclin 1 protein
OS=Medicago truncatula GN=atg6 PE=2 SV=1,81.63,9e-19,
,gene.Ljchr1_pseudomol_20120830.path1.gene2331.1
(134 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7IW09_MEDTR (tr|G7IW09) Beclin 1 protein OS=Medicago truncatula... 97 2e-18
Q4A185_MEDTR (tr|Q4A185) Beclin 1 protein OS=Medicago truncatula... 97 2e-18
G7IW08_MEDTR (tr|G7IW08) Beclin 1 protein OS=Medicago truncatula... 97 2e-18
I1LLC2_SOYBN (tr|I1LLC2) Uncharacterized protein OS=Glycine max ... 94 2e-17
Q4A189_SOYBN (tr|Q4A189) Beclin 1 protein OS=Glycine max GN=atg6... 94 2e-17
I1JWG4_SOYBN (tr|I1JWG4) Uncharacterized protein OS=Glycine max ... 92 5e-17
I3SBI2_MEDTR (tr|I3SBI2) Uncharacterized protein OS=Medicago tru... 92 6e-17
Q4A183_VITVI (tr|Q4A183) Beclin 1 protein (Fragment) OS=Vitis vi... 82 5e-14
D7UCP6_VITVI (tr|D7UCP6) Putative uncharacterized protein OS=Vit... 82 6e-14
B9SBI9_RICCO (tr|B9SBI9) Beclin-1, putative OS=Ricinus communis ... 81 1e-13
Q4A188_GOSRA (tr|Q4A188) Beclin 1 protein OS=Gossypium raimondii... 77 2e-12
A8MRV3_ARATH (tr|A8MRV3) Beclin-1-like protein OS=Arabidopsis th... 76 3e-12
M5X5H8_PRUPE (tr|M5X5H8) Uncharacterized protein OS=Prunus persi... 76 5e-12
Q4QXM1_NICBE (tr|Q4QXM1) Autophagy protein beclin1 OS=Nicotiana ... 75 8e-12
Q4A186_MALDO (tr|Q4A186) Beclin 1 protein OS=Malus domestica GN=... 74 1e-11
R0HLD0_9BRAS (tr|R0HLD0) Uncharacterized protein OS=Capsella rub... 74 1e-11
B9GR07_POPTR (tr|B9GR07) Predicted protein OS=Populus trichocarp... 74 3e-11
M0TKD8_MUSAM (tr|M0TKD8) Uncharacterized protein OS=Musa acumina... 73 4e-11
Q4A184_SOLTU (tr|Q4A184) Beclin 1 protein OS=Solanum tuberosum G... 72 8e-11
M1BIY9_SOLTU (tr|M1BIY9) Uncharacterized protein OS=Solanum tube... 72 9e-11
Q4A187_SOLLC (tr|Q4A187) Beclin 1 protein OS=Solanum lycopersicu... 71 1e-10
G8Z268_SOLLC (tr|G8Z268) Hop-interacting protein THI040 OS=Solan... 71 1e-10
K4C171_SOLLC (tr|K4C171) Uncharacterized protein OS=Solanum lyco... 71 1e-10
R0I1U5_9BRAS (tr|R0I1U5) Uncharacterized protein OS=Capsella rub... 70 2e-10
M1BIY8_SOLTU (tr|M1BIY8) Uncharacterized protein OS=Solanum tube... 70 3e-10
M1BIY7_SOLTU (tr|M1BIY7) Uncharacterized protein OS=Solanum tube... 70 3e-10
D7LSN1_ARALL (tr|D7LSN1) Putative uncharacterized protein OS=Ara... 63 4e-08
>G7IW09_MEDTR (tr|G7IW09) Beclin 1 protein OS=Medicago truncatula GN=MTR_3g018770
PE=4 SV=1
Length = 517
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 63 KKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KKGR+R+LPVD N+PRWVCQNCRN LCIVGVDSYADK+FNDPSRS G
Sbjct: 14 KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQG 62
>Q4A185_MEDTR (tr|Q4A185) Beclin 1 protein OS=Medicago truncatula GN=atg6 PE=2
SV=1
Length = 508
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 63 KKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KKGR+R+LPVD N+PRWVCQNCRN LCIVGVDSYADK+FNDPSRS G
Sbjct: 6 KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQG 54
>G7IW08_MEDTR (tr|G7IW08) Beclin 1 protein OS=Medicago truncatula GN=MTR_3g018770
PE=4 SV=1
Length = 567
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 63 KKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KKGR+R+LPVD N+PRWVCQNCRN LCIVGVDSYADK+FNDPSRS G
Sbjct: 14 KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQG 62
>I1LLC2_SOYBN (tr|I1LLC2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 509
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 41/48 (85%)
Query: 64 KGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KGR+R+ PVD N+PRWVCQNCRN LCIVG DSYADKFFNDPSRS G
Sbjct: 7 KGRTRSFPVDPNVPRWVCQNCRNPLCIVGADSYADKFFNDPSRSGMQG 54
>Q4A189_SOYBN (tr|Q4A189) Beclin 1 protein OS=Glycine max GN=atg6 PE=2 SV=1
Length = 509
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 41/48 (85%)
Query: 64 KGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KGR+R+ PVD N+PRWVCQNCRN LCIVG DSYADKFFNDPSRS G
Sbjct: 7 KGRTRSFPVDPNVPRWVCQNCRNPLCIVGADSYADKFFNDPSRSGMQG 54
>I1JWG4_SOYBN (tr|I1JWG4) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 509
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 40/48 (83%)
Query: 64 KGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KGR+RT PVD N+PRWVCQNCRN LCIVG DSYADKFFNDPSR G
Sbjct: 7 KGRTRTFPVDPNVPRWVCQNCRNPLCIVGADSYADKFFNDPSRYGMQG 54
>I3SBI2_MEDTR (tr|I3SBI2) Uncharacterized protein OS=Medicago truncatula PE=2
SV=1
Length = 235
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 63 KKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
KKGR+R+LPVD N+PRWVCQNCRN LCIVGVDSYADK+FNDPSRS G
Sbjct: 14 KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQG 62
>Q4A183_VITVI (tr|Q4A183) Beclin 1 protein (Fragment) OS=Vitis vinifera GN=atg6
PE=2 SV=1
Length = 479
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 61 EMKKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
E +SRT PVD +PRWVCQNCR++LCIVGVDSYADKF++D SRS G
Sbjct: 3 EDSANKSRTFPVDPTLPRWVCQNCRHNLCIVGVDSYADKFYSDSSRSGMQG 53
>D7UCP6_VITVI (tr|D7UCP6) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_15s0046g00950 PE=2 SV=1
Length = 522
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 61 EMKKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
E +SRT PVD +PRWVCQNCR++LCIVGVDSYADKF++D SRS G
Sbjct: 3 EDSANKSRTFPVDPTLPRWVCQNCRHNLCIVGVDSYADKFYSDSSRSGMQG 53
>B9SBI9_RICCO (tr|B9SBI9) Beclin-1, putative OS=Ricinus communis GN=RCOM_0718600
PE=4 SV=1
Length = 523
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/47 (74%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFND-PSRSTSSG 111
+SRT PVD N+PRWVCQNCR+SLCIVGVDSYADKF N+ SRS G
Sbjct: 10 KSRTFPVDPNLPRWVCQNCRHSLCIVGVDSYADKFLNESSSRSAMQG 56
>Q4A188_GOSRA (tr|Q4A188) Beclin 1 protein OS=Gossypium raimondii GN=atg6 PE=2
SV=1
Length = 511
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
+ R+LPVD N+P+W+CQNC +SLCIVGVDSY DKF ND SRS G
Sbjct: 9 KGRSLPVDPNLPKWICQNCHHSLCIVGVDSYVDKFPNDSSRSAMQG 54
>A8MRV3_ARATH (tr|A8MRV3) Beclin-1-like protein OS=Arabidopsis thaliana GN=ATG6
PE=4 SV=1
Length = 386
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
+SRT+P+D N+P+WVCQNC +SL IVGVDSYA KFFNDP S + G
Sbjct: 9 KSRTIPIDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDPPPSATQG 54
>M5X5H8_PRUPE (tr|M5X5H8) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004470mg PE=4 SV=1
Length = 508
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/46 (71%), Positives = 36/46 (78%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
R R VD N+PR+VCQNCRNSLCIVG DSYA+KFFND SRS G
Sbjct: 4 RGRGFQVDPNLPRYVCQNCRNSLCIVGADSYAEKFFNDFSRSGMQG 49
>Q4QXM1_NICBE (tr|Q4QXM1) Autophagy protein beclin1 OS=Nicotiana benthamiana PE=2
SV=1
Length = 527
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFND-PSRSTSSG 111
+ RTLPVD N+PR++CQNC N LC+VGVD+YADKFF D PSRS G
Sbjct: 16 KGRTLPVDPNLPRYLCQNCHNPLCVVGVDNYADKFFPDFPSRSGMQG 62
>Q4A186_MALDO (tr|Q4A186) Beclin 1 protein OS=Malus domestica GN=atg6 PE=2 SV=1
Length = 505
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
R R+ VD N+PR+VCQNCRNSLC+VG DSYA+KFF+D SRS G
Sbjct: 4 RGRSFTVDPNVPRYVCQNCRNSLCVVGADSYAEKFFHDFSRSGMQG 49
>R0HLD0_9BRAS (tr|R0HLD0) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10019433mg PE=4 SV=1
Length = 519
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
++RT+PVD N+P+WVCQNC +SL IVGVDSYA KFFND S G
Sbjct: 9 KTRTIPVDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDSPHSAMQG 54
>B9GR07_POPTR (tr|B9GR07) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_816633 PE=4 SV=1
Length = 516
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFND-PSRSTSSG 111
R++T D N+PRWVCQNCRN LCIVGVDS+ADKF ND SRS G
Sbjct: 10 RNQTFQADPNLPRWVCQNCRNPLCIVGVDSFADKFLNDSSSRSGMQG 56
>M0TKD8_MUSAM (tr|M0TKD8) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 521
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRS 107
+ ++ P+D N+P VCQNC ++LC+VGVDSYADKFFNDPSRS
Sbjct: 10 KGKSFPMDPNLPIGVCQNCHHALCVVGVDSYADKFFNDPSRS 51
>Q4A184_SOLTU (tr|Q4A184) Beclin 1 protein OS=Solanum tuberosum GN=atg6 PE=2 SV=1
Length = 522
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
+ RTLPVD N+PR++CQNC N LCI GVD+YADKFF P S+ SG
Sbjct: 11 KGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFF--PDSSSRSG 54
>M1BIY9_SOLTU (tr|M1BIY9) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400017986 PE=4 SV=1
Length = 522
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
+ RTLPVD N+PR++CQNC N LCI GVD+YADKFF P S+ SG
Sbjct: 11 KGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFF--PDSSSRSG 54
>Q4A187_SOLLC (tr|Q4A187) Beclin 1 protein OS=Solanum lycopersicum GN=atg6 PE=2
SV=1
Length = 523
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPS 105
+ RTLPVD N+PR++CQNC N LCI GVD+YADKFF D S
Sbjct: 11 KGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFFPDSS 50
>G8Z268_SOLLC (tr|G8Z268) Hop-interacting protein THI040 OS=Solanum lycopersicum
PE=2 SV=1
Length = 523
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPS 105
+ RTLPVD N+PR++CQNC N LCI GVD+YADKFF D S
Sbjct: 11 KGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFFPDSS 50
>K4C171_SOLLC (tr|K4C171) Uncharacterized protein OS=Solanum lycopersicum GN=atg6
PE=4 SV=1
Length = 523
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPS 105
+ RTLPVD N+PR++CQNC N LCI GVD+YADKFF D S
Sbjct: 11 KGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFFPDSS 50
>R0I1U5_9BRAS (tr|R0I1U5) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10013463mg PE=4 SV=1
Length = 518
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 66 RSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
++RT+ VD N+P+WVCQNC +SL IVGVDSYA KFFND S G
Sbjct: 9 KTRTIQVDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDSPHSAMQG 54
>M1BIY8_SOLTU (tr|M1BIY8) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400017986 PE=4 SV=1
Length = 395
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 60 SEMKKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
S + RTLPVD N+PR++CQNC N LCI GVD+YADKFF P S+ SG
Sbjct: 5 SSATPDKGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFF--PDSSSRSG 54
>M1BIY7_SOLTU (tr|M1BIY7) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400017986 PE=4 SV=1
Length = 374
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 60 SEMKKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
S + RTLPVD N+PR++CQNC N LCI GVD+YADKFF P S+ SG
Sbjct: 5 SSATPDKGRTLPVDPNLPRYICQNCHNPLCIAGVDNYADKFF--PDSSSRSG 54
>D7LSN1_ARALL (tr|D7LSN1) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_486660 PE=4 SV=1
Length = 513
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 72 VDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
+D N+P+WVCQNC ++L IVGVDSYA KFFND S + G
Sbjct: 12 IDPNLPKWVCQNCHHALTIVGVDSYAGKFFNDSPPSGTQG 51