Miyakogusa Predicted Gene
- Lj1g3v0579550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0579550.1 Non Chatacterized Hit- tr|I3SPX8|I3SPX8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,82.98,0.00000000000006,CCT,CCT domain,CUFF.26224.1
(124 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I3SPX8_LOTJA (tr|I3SPX8) Uncharacterized protein OS=Lotus japoni... 83 4e-14
D0EP03_SOYBN (tr|D0EP03) CONSTANS-like zinc finger protein OS=Gl... 74 2e-11
D0EP05_SOYBN (tr|D0EP05) CONSTANS-like zinc finger protein OS=Gl... 71 2e-10
G7JD46_MEDTR (tr|G7JD46) CONSTANS-like zinc finger protein OS=Me... 70 2e-10
D9ZIW7_MALDO (tr|D9ZIW7) COL domain class transcription factor O... 70 4e-10
F6GXA6_VITVI (tr|F6GXA6) Putative uncharacterized protein OS=Vit... 65 6e-09
B9N8T0_POPTR (tr|B9N8T0) Predicted protein OS=Populus trichocarp... 64 2e-08
M5XRX0_PRUPE (tr|M5XRX0) Uncharacterized protein OS=Prunus persi... 64 2e-08
B9T618_RICCO (tr|B9T618) Zinc finger protein, putative OS=Ricinu... 63 4e-08
D3JWB7_ARAHY (tr|D3JWB7) CCT domain protein (Fragment) OS=Arachi... 62 6e-08
B9IM34_POPTR (tr|B9IM34) Predicted protein OS=Populus trichocarp... 62 6e-08
Q9ZTK8_MALDO (tr|Q9ZTK8) CONSTANS-like protein 1 OS=Malus domest... 60 3e-07
B3GCI6_MALDO (tr|B3GCI6) CONSTANS-like 1 OS=Malus domestica GN=C... 60 4e-07
Q9ZTK7_MALDO (tr|Q9ZTK7) COL domain class transcription factor O... 58 1e-06
B3TZZ8_BETVU (tr|B3TZZ8) COL2 (Fragment) OS=Beta vulgaris subsp.... 57 2e-06
K9K2L6_9ASPA (tr|K9K2L6) CONSTANS-like 1 protein OS=Phalaenopsis... 56 5e-06
K9K3D1_9ASPA (tr|K9K3D1) CONSTANS-like 2 protein OS=Phalaenopsis... 56 5e-06
>I3SPX8_LOTJA (tr|I3SPX8) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
Length = 83
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 43/47 (91%)
Query: 48 MSSYANKRRQGIFWRVRIRLRKVVYSVWKMADVWHRTLFLKWWLLAA 94
MS YANKRRQGIFWRVRIR+ KVV SVWK+A+VWHRTLFLKWWLLA
Sbjct: 1 MSGYANKRRQGIFWRVRIRVGKVVCSVWKIAEVWHRTLFLKWWLLAG 47
>D0EP03_SOYBN (tr|D0EP03) CONSTANS-like zinc finger protein OS=Glycine max
GN=COL8 PE=2 SV=1
Length = 374
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 1 MVVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPGYDLMSSYANKR 55
+VVSG Q ATQLCGMDREARVLRYREKRKNRKFEKTI Y +YA R
Sbjct: 283 VVVSGNSVGQGATQLCGMDREARVLRYREKRKNRKFEKTI---RYASRKAYAETR 334
>D0EP05_SOYBN (tr|D0EP05) CONSTANS-like zinc finger protein OS=Glycine max
GN=COL10 PE=2 SV=1
Length = 365
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 36/40 (90%), Gaps = 3/40 (7%)
Query: 1 MVVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
+VVSGG G ATQLCGMDREARVLRYREKRKNRKFEKTI
Sbjct: 277 IVVSGGQG---ATQLCGMDREARVLRYREKRKNRKFEKTI 313
>G7JD46_MEDTR (tr|G7JD46) CONSTANS-like zinc finger protein OS=Medicago
truncatula GN=MTR_4g128930 PE=4 SV=1
Length = 375
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
Query: 2 VVSGG-----GGSQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPGYDLMSSYANKR 55
+VSGG G Q ATQLCGMDREARV+RYREKRKNRKFEKTI Y +YA R
Sbjct: 275 MVSGGVNSSNQGVQGATQLCGMDREARVMRYREKRKNRKFEKTI---RYASRKAYAETR 330
>D9ZIW7_MALDO (tr|D9ZIW7) COL domain class transcription factor OS=Malus
domestica GN=COL15 PE=2 SV=1
Length = 364
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 34/38 (89%)
Query: 3 VSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
VS SQPATQLCG++REARVLRYREKRKNRKF+KTI
Sbjct: 274 VSATPASQPATQLCGLNREARVLRYREKRKNRKFQKTI 311
>F6GXA6_VITVI (tr|F6GXA6) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_11s0052g01800 PE=4 SV=1
Length = 361
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 12 ATQLCGMDREARVLRYREKRKNRKFEKTIFHPGYDLMSSYANKRRQGIFWRVRIRLRKVV 71
ATQL GMDREARVLRYREKRKNRKFEKTI Y +YA R R++ R K
Sbjct: 279 ATQLSGMDREARVLRYREKRKNRKFEKTI---RYASRKAYAETR-----PRIKGRFAKRT 330
Query: 72 YSVWKMADVWHRTLFLKWWLLAAGWVLI 99
+M D + + +++ AG+ ++
Sbjct: 331 EMESEMVDHIYNSASAAAFMVDAGYGVV 358
>B9N8T0_POPTR (tr|B9N8T0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_837482 PE=4 SV=1
Length = 339
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 33/40 (82%)
Query: 1 MVVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
M +SG +Q A QL G+DREARVLRYREKRKNRKFEKTI
Sbjct: 247 MPISGSTTNQAAAQLAGIDREARVLRYREKRKNRKFEKTI 286
>M5XRX0_PRUPE (tr|M5XRX0) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa007083mg PE=4 SV=1
Length = 383
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 3 VSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPGYDLMSSYANKR 55
VS +Q ATQL G+DREARVLRYREKRKNRKF+KTI Y +YA R
Sbjct: 294 VSATTANQVATQLSGLDREARVLRYREKRKNRKFQKTI---RYASRKAYAETR 343
>B9T618_RICCO (tr|B9T618) Zinc finger protein, putative OS=Ricinus communis
GN=RCOM_0025300 PE=4 SV=1
Length = 388
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 6 GGGSQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPGYDLMSSYANKR 55
G + A Q+CG++REARVLRYREKRKNRKFEKTI Y +YA R
Sbjct: 301 GNSTNQAAQMCGINREARVLRYREKRKNRKFEKTI---RYASRKAYAETR 347
>D3JWB7_ARAHY (tr|D3JWB7) CCT domain protein (Fragment) OS=Arachis hypogaea
GN=CCT PE=2 SV=1
Length = 345
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 13 TQLCGMDREARVLRYREKRKNRKFEKTI 40
TQLCGMDREARVLRYREKRKNRKFEKTI
Sbjct: 247 TQLCGMDREARVLRYREKRKNRKFEKTI 274
>B9IM34_POPTR (tr|B9IM34) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_737847 PE=4 SV=1
Length = 362
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 1 MVVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
M +SG +Q ATQL G+DREARVLRYRE+RKNRKFEKTI
Sbjct: 270 MPLSGWTANQAATQLAGIDREARVLRYRERRKNRKFEKTI 309
>Q9ZTK8_MALDO (tr|Q9ZTK8) CONSTANS-like protein 1 OS=Malus domestica GN=Col1 PE=2
SV=1
Length = 340
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 29/39 (74%)
Query: 2 VVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
+ S S PA QL DREARVLRYREKRKNRKFEKTI
Sbjct: 261 MTSAVESSHPAVQLSSADREARVLRYREKRKNRKFEKTI 299
>B3GCI6_MALDO (tr|B3GCI6) CONSTANS-like 1 OS=Malus domestica GN=COL1 PE=4 SV=1
Length = 340
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 29/39 (74%)
Query: 2 VVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
+ S S PA QL DREARVLRYREKRKNRKFEKTI
Sbjct: 261 MTSAVESSHPAVQLSSADREARVLRYREKRKNRKFEKTI 299
>Q9ZTK7_MALDO (tr|Q9ZTK7) COL domain class transcription factor OS=Malus
domestica GN=Col2 PE=2 SV=1
Length = 329
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 2 VVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
V + SQPA QL +DR ARVLRYREKRKNRKFEKTI
Sbjct: 250 VTAAVETSQPAVQLSSVDRVARVLRYREKRKNRKFEKTI 288
>B3TZZ8_BETVU (tr|B3TZZ8) COL2 (Fragment) OS=Beta vulgaris subsp. vulgaris
GN=COL2 PE=4 SV=1
Length = 348
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 2 VVSGGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
V S G Q ++ GMDREARVLRYREKRKNRKFEKTI
Sbjct: 295 VASTGFDKQQQMKIIGMDREARVLRYREKRKNRKFEKTI 333
>K9K2L6_9ASPA (tr|K9K2L6) CONSTANS-like 1 protein OS=Phalaenopsis hybrid cultivar
GN=COL1 PE=4 SV=1
Length = 334
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 29/36 (80%)
Query: 5 GGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
GGG S T + MDREARV+RYREKRKNR+FEKTI
Sbjct: 243 GGGRSSSVTAVSMMDREARVMRYREKRKNRRFEKTI 278
>K9K3D1_9ASPA (tr|K9K3D1) CONSTANS-like 2 protein OS=Phalaenopsis hybrid cultivar
GN=COL2 PE=4 SV=1
Length = 334
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 29/36 (80%)
Query: 5 GGGGSQPATQLCGMDREARVLRYREKRKNRKFEKTI 40
GGG S T + MDREARV+RYREKRKNR+FEKTI
Sbjct: 243 GGGRSSSVTAVSMMDREARVMRYREKRKNRRFEKTI 278