Miyakogusa Predicted Gene

Lj1g3v0342030.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0342030.1 Non Chatacterized Hit- tr|D7SHM6|D7SHM6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.27,0.000000000008,
,gene.Ljchr1_pseudomol_20120830.path1.gene858.1
         (111 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7J4W1_MEDTR (tr|G7J4W1) JmjC domain-containing protein OS=Medic...   168   6e-40
K7KKZ1_SOYBN (tr|K7KKZ1) Uncharacterized protein OS=Glycine max ...   147   1e-33
M5WWJ5_PRUPE (tr|M5WWJ5) Uncharacterized protein OS=Prunus persi...    79   8e-13
D7SHM6_VITVI (tr|D7SHM6) Putative uncharacterized protein OS=Vit...    75   1e-11
B9IEV4_POPTR (tr|B9IEV4) Predicted protein OS=Populus trichocarp...    70   3e-10

>G7J4W1_MEDTR (tr|G7J4W1) JmjC domain-containing protein OS=Medicago truncatula
           GN=MTR_3g077420 PE=4 SV=1
          Length = 525

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 81/112 (72%), Positives = 92/112 (82%), Gaps = 3/112 (2%)

Query: 3   LGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSSDL 62
           +GS+ K+ASDMKHVHALEG  DCIVDMIK  EDPRFSK CMQVG+TYLMIHEQ++LSSD 
Sbjct: 414 IGSIRKVASDMKHVHALEGTRDCIVDMIKTFEDPRFSKFCMQVGKTYLMIHEQSNLSSDF 473

Query: 63  ESTSMVDLVGLNVLKACLPSQVYTPEDLIKFIDTAVS---CCYVESSVLHVA 111
           ES S+VDLV L VLKAC  SQ+YTPEDLIKFID  ++      +ESSVLHVA
Sbjct: 474 ESASLVDLVDLCVLKACTSSQIYTPEDLIKFIDNTIAELGDINMESSVLHVA 525


>K7KKZ1_SOYBN (tr|K7KKZ1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 522

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 87/115 (75%), Gaps = 5/115 (4%)

Query: 1   MILGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSS 60
           M LG + KIAS+MK +HALEGNHD +VDMI+A EDPRFSKLCM VGRTY+MI EQ++LS 
Sbjct: 409 MNLGCLRKIASEMKSMHALEGNHDYVVDMIEAFEDPRFSKLCMHVGRTYIMIQEQSYLSL 468

Query: 61  DLESTSMVDLVGLNVLKACLPSQVYTPEDLIKFIDTAVS----CCYVESSVLHVA 111
           D E TSM DLV LN +K+   SQ+YTPEDLIKFID  V+    C   E  +LHVA
Sbjct: 469 DFECTSMCDLVDLNDMKS-YTSQIYTPEDLIKFIDNGVAELGDCFIEEQPILHVA 522


>M5WWJ5_PRUPE (tr|M5WWJ5) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa004952mg PE=4 SV=1
          Length = 484

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 3   LGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSSDL 62
           L S+ KIA ++K V  L G+H   +D  + L+DP F KLC  +G+TY M+H Q + +S  
Sbjct: 374 LASIQKIALNIKSVEDLTGSHGFHLDFRETLKDPEFFKLCTILGKTYGMVHMQLNWNSAT 433

Query: 63  ESTSMVDLVGLNVLKACLPSQVYTPEDLIKFIDTAVS 99
           ++  + D+  L+V+  C  SQV  PEDLIKFI+ AV+
Sbjct: 434 KNAWIDDMKDLDVIGTC-SSQVCNPEDLIKFIELAVA 469


>D7SHM6_VITVI (tr|D7SHM6) Putative uncharacterized protein OS=Vitis vinifera
           GN=VIT_17s0000g08880 PE=4 SV=1
          Length = 498

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 3/97 (3%)

Query: 3   LGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSSDL 62
           L S  KI   MK V AL G+H  ++D+ K ++D +F +LC  + RTY  IH++   + D 
Sbjct: 378 LLSAQKIVLKMKTVDALAGDHALLLDLRKMMDDSKFLELCSGLDRTYRGIHKEQQQNYDK 437

Query: 63  ESTSMVDLVGLN-VLKACLPSQVYTPEDLIKFIDTAV 98
           + T M  L  L+ ++K+C  SQ+Y PEDL+ FID+AV
Sbjct: 438 KETLMDGLGDLDFIVKSC--SQIYAPEDLVSFIDSAV 472


>B9IEV4_POPTR (tr|B9IEV4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_776125 PE=4 SV=1
          Length = 553

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 10/109 (9%)

Query: 3   LGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSSDL 62
           L S+ +IA  +  +  + GNH   +D+++ L+DP F KL + VGR Y  IHEQ + S D 
Sbjct: 439 LASIRRIALKLTSMDVVAGNHGFFLDLMETLDDPNFLKLFIDVGRAYGKIHEQQNCSCDT 498

Query: 63  ESTSMVDLVGLNVLKACLPSQVYTPEDLIKFIDTAV---SCCYVESSVL 108
           +   MV+ +  +       S +  PED +KFID +V   S  + E ++L
Sbjct: 499 KKAWMVEFLDYS-------SHIRNPEDFVKFIDYSVAKLSASFCEENLL 540