Miyakogusa Predicted Gene

Lj1g3v0013230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0013230.1 tr|O22512|O22512_SOYBN Grr1 OS=Glycine max
GN=grr1 PE=2 SV=1,46.05,0.00000000004,
,NODE_34412_length_216_cov_656.555542.path3.1
         (68 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

O22512_SOYBN (tr|O22512) Grr1 OS=Glycine max GN=grr1 PE=2 SV=1         72   6e-11

>O22512_SOYBN (tr|O22512) Grr1 OS=Glycine max GN=grr1 PE=2 SV=1
          Length = 690

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 8/76 (10%)

Query: 1   MIFALGGQYTQTPRKQVSSCLMAFQLMYTFLLGKGHESVLQWLE--------QKQETSIE 52
           MI  +G      P++ VSSCL+A +LM+TFL  +G  SV   +         + Q TSIE
Sbjct: 52  MISTMGAPIYPNPKEHVSSCLLAVKLMFTFLFRRGLASVFHLISAENGLSRSRSQRTSIE 111

Query: 53  TLPDECLFEIFRKLPG 68
           +LPDECLFEI R+LP 
Sbjct: 112 SLPDECLFEILRRLPA 127