Miyakogusa Predicted Gene

Lj0g3v0360179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360179.1 Non Chatacterized Hit- tr|I1LKD2|I1LKD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23913
PE,52.27,3e-16,seg,NULL,CUFF.24917.1
         (150 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M5VZ74_PRUPE (tr|M5VZ74) Uncharacterized protein OS=Prunus persi...    66   4e-09

>M5VZ74_PRUPE (tr|M5VZ74) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa008605mg PE=4 SV=1
          Length = 325

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 68/148 (45%), Gaps = 26/148 (17%)

Query: 3   ETSSDHTPHIPIEIITDDEMALIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
           +  +D  P IPIEI++++EMAL+E                                    
Sbjct: 20  DNKNDIVPEIPIEIVSEEEMALLEAALVSARASFSAIPAIRCSTFSFRSNVRS------- 72

Query: 63  XXXXXXIKSITVLSKRSFSHATGSGTSTHHPDIEDS----SPKLKTLLPDSFLHRFRKNR 118
                 IKSI+ LSKR  S  +        PDIEDS    S + KT + DSFLHRFRK +
Sbjct: 73  ------IKSISALSKRRLSGCS-------EPDIEDSGGLKSAQKKTRMADSFLHRFRK-K 118

Query: 119 GLSVTDITST-VSKLFLYLYLLMGCEHV 145
           GLSVTDIT+T   +  +   LL+G   V
Sbjct: 119 GLSVTDITATEWCEKQMEFVLLVGKRKV 146