Miyakogusa Predicted Gene

Lj0g3v0344429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344429.1 tr|Q5ULY0|Q5ULY0_FRAAN Basic helix-loop-helix
protein (Fragment) OS=Fragaria ananassa PE=2
SV=1,46.94,0.000005,seg,NULL,CUFF.23650.1
         (101 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0JP14_LOTJA (tr|C0JP14) Putative basic helix-loop-helix protein...    86   4e-15

>C0JP14_LOTJA (tr|C0JP14) Putative basic helix-loop-helix protein BHLH9
          OS=Lotus japonicus PE=4 SV=1
          Length = 165

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/41 (100%), Positives = 41/41 (100%)

Query: 44 LHSTAGAFLSAPPHPLLAANVSSSSLGISENEADEYDCESE 84
          LHSTAGAFLSAPPHPLLAANVSSSSLGISENEADEYDCESE
Sbjct: 9  LHSTAGAFLSAPPHPLLAANVSSSSLGISENEADEYDCESE 49