Miyakogusa Predicted Gene

Lj0g3v0342739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342739.1 Non Chatacterized Hit- tr|I1KDV1|I1KDV1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,53.26,2e-19,
,CUFF.23494.1
         (147 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M0UBS0_MUSAM (tr|M0UBS0) Uncharacterized protein (Fragment) OS=M...    86   5e-15
Q6L411_SOLDE (tr|Q6L411) Polyprotein, putative OS=Solanum demiss...    80   3e-13
Q6L3M9_SOLDE (tr|Q6L3M9) Integrase core domain containing protei...    78   1e-12
A5BF87_VITVI (tr|A5BF87) Putative uncharacterized protein OS=Vit...    72   5e-11
A5ANC5_VITVI (tr|A5ANC5) Putative uncharacterized protein OS=Vit...    69   6e-10
A5C0D3_VITVI (tr|A5C0D3) Putative uncharacterized protein OS=Vit...    66   4e-09
K7L8C7_SOYBN (tr|K7L8C7) Uncharacterized protein OS=Glycine max ...    65   6e-09
Q0ZCD8_POPTR (tr|Q0ZCD8) CCHC-type integrase (Fragment) OS=Popul...    64   2e-08
A5B538_VITVI (tr|A5B538) Putative uncharacterized protein OS=Vit...    59   6e-07
A5C013_VITVI (tr|A5C013) Putative uncharacterized protein OS=Vit...    59   7e-07
A5AGN2_VITVI (tr|A5AGN2) Putative uncharacterized protein OS=Vit...    58   1e-06
A5B160_VITVI (tr|A5B160) Putative uncharacterized protein OS=Vit...    57   2e-06
A5CBM0_VITVI (tr|A5CBM0) Putative uncharacterized protein OS=Vit...    57   2e-06
A5C275_VITVI (tr|A5C275) Putative uncharacterized protein OS=Vit...    57   3e-06
A5BG64_VITVI (tr|A5BG64) Putative uncharacterized protein OS=Vit...    56   5e-06
A5C7A6_VITVI (tr|A5C7A6) Putative uncharacterized protein OS=Vit...    56   6e-06

>M0UBS0_MUSAM (tr|M0UBS0) Uncharacterized protein (Fragment) OS=Musa acuminata
           subsp. malaccensis PE=4 SV=1
          Length = 512

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 2   VTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPI 61
           + +  S + DYLH+I+ I D L L  H + + ++ +H LN LG  + E  A++RA DSPI
Sbjct: 88  IKQEGSVIADYLHNIKVIIDNLALVGHSLSDEEVTVHILNGLGDEYKELAAAIRARDSPI 147

Query: 62  NFDELYDKLVDFEIFDKHEDHFHTAPPVTANFCKLLGSHGRSKNNSHN 109
            F+ELYDKL+DFEI+ K ED     P +TA   +      + + NS+N
Sbjct: 148 TFEELYDKLIDFEIYLKREDK-PPGPSITAQVTQ------KRRGNSYN 188


>Q6L411_SOLDE (tr|Q6L411) Polyprotein, putative OS=Solanum demissum
           GN=SDM1_44t00001 PE=4 SV=2
          Length = 369

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 5/120 (4%)

Query: 9   VRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPINFDELYD 68
           V DYLH +RS+ D+L      + N +L++  L  LGP F E  A++RA DS I++ ELY+
Sbjct: 135 VADYLHQVRSLCDELATAGAPMSNEELIVKILTGLGPKFREISAAIRARDSAISYPELYE 194

Query: 69  KLVDFEIFDKHEDHFHT-APPVTANFCKLLGSHGRSKNNSH---NA-SPSTKKILTSESS 123
           KL+D E+F KHE+       P+TA   + +  H R  N S+   NA SP+T +   ++ S
Sbjct: 195 KLLDHELFIKHEEAKKPLLTPITAAIAQQINMHPRQGNTSNRRSNANSPNTNQSRRAQPS 254


>Q6L3M9_SOLDE (tr|Q6L3M9) Integrase core domain containing protein OS=Solanum
           demissum GN=SDM1_27t00004 PE=4 SV=2
          Length = 1760

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 5   RTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPINFD 64
           +T  V DYLH +RS+ D+L      + N +L++  L  LGP F E  A++RA DS I++ 
Sbjct: 131 KTLPVADYLHQVRSLCDELATAGAPMSNEELIVKILTGLGPKFREISAAIRARDSAISYP 190

Query: 65  ELYDKLVDFEIFDKHEDHFHT-APPVTANFCKLLGSHGRSKNNSHNAS 111
           ELY+KL+D E+F KHE+       P+TA   + +  H R  N S+  S
Sbjct: 191 ELYEKLLDHELFIKHEEAKKPLLTPITAAIAQQINMHPRQGNTSNRRS 238


>A5BF87_VITVI (tr|A5BF87) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_042091 PE=4 SV=1
          Length = 1427

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 53/80 (66%)

Query: 2   VTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPI 61
           +T  T  V +YL +I+ I D+L L   H+ + DL I ALN LG  F E  A++RA ++PI
Sbjct: 146 ITCNTRSVAEYLQTIKGIADELALIDTHLSDDDLTIFALNGLGSGFKEISAAIRARETPI 205

Query: 62  NFDELYDKLVDFEIFDKHED 81
           +F+EL+DKLV+ E F K E+
Sbjct: 206 SFEELHDKLVEHETFLKREE 225


>A5ANC5_VITVI (tr|A5ANC5) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_030313 PE=4 SV=1
          Length = 414

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%)

Query: 2   VTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPI 61
            TK +  + +Y+ +I+ I B L    + +   ++++H  N L   F E  A++RA DSP+
Sbjct: 152 TTKGSQSIXEYMQTIKIITBDLAFMGYPLSEDEIILHVFNGLDNDFKEISAAIRARDSPV 211

Query: 62  NFDELYDKLVDFEIFDKHEDHFHTAPPVTANF 93
            F+EL+DKL D E   K +D    APP+ A F
Sbjct: 212 TFEELHDKLQDQETXLKQDDTSKEAPPIXAQF 243


>A5C0D3_VITVI (tr|A5C0D3) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_026262 PE=4 SV=1
          Length = 752

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 51/80 (63%)

Query: 2   VTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPI 61
           +T  T  V +YL +I+ I D+L L   H+ + DL I ALN LG  F +  A++RA D+P+
Sbjct: 146 ITCNTRSVAEYLQTIKGIVDELALIDTHLSDDDLTIFALNGLGSGFKDISAAIRARDTPV 205

Query: 62  NFDELYDKLVDFEIFDKHED 81
           +F+EL+DKL   E F K E+
Sbjct: 206 SFEELHDKLEKHEAFLKREE 225


>K7L8C7_SOYBN (tr|K7L8C7) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 342

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 3   TKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPIN 62
           TK +  + DYLH I+S+ D+LT+    +D++DLVIH LN LG  + E   ++   + PI+
Sbjct: 66  TKGSLSMTDYLHGIKSLTDELTIINAPLDDVDLVIHTLNGLGVEYKEVSVALHTREKPID 125

Query: 63  FDELYDKLVDFEIFDKHEDHFHTAPPVTANFCKLLGS---HGRSKNNSHNASP--STKKI 117
           F+EL+D L DFE + K + + +    V        G    H +S N +H +S   ST  +
Sbjct: 126 FEELHDLLSDFESYLKRDGNNNYTSFVAIAHASHKGKQPYHKKSYNPNHGSSSNRSTSPL 185

Query: 118 LTSESSV 124
           L  E  +
Sbjct: 186 LKEEKEL 192


>Q0ZCD8_POPTR (tr|Q0ZCD8) CCHC-type integrase (Fragment) OS=Populus trichocarpa
           PE=2 SV=1
          Length = 441

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 56/109 (51%)

Query: 1   MVTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSP 60
           ++ +    V++YLH ++++ D++ L  H I   DL  + LN LGP F E  A +RA +  
Sbjct: 148 LIKRDNKTVQEYLHIVKTLADEIALIDHPISADDLTFYILNGLGPDFREIAAPIRAREKS 207

Query: 61  INFDELYDKLVDFEIFDKHEDHFHTAPPVTANFCKLLGSHGRSKNNSHN 109
           + F+EL+D LV  E + +  +        T NF    G H +S   SH 
Sbjct: 208 LTFEELHDLLVSHEAYLRRLETAAQHLVATTNFSSRSGGHRQSMAPSHG 256


>A5B538_VITVI (tr|A5B538) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_025377 PE=4 SV=1
          Length = 1578

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 48/76 (63%)

Query: 1   MVTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSP 60
           + T+ T  V ++LH I+ I ++LT+  H + + DL ++ LN LGP F E  A +RA ++ 
Sbjct: 87  LSTRGTRTVTEFLHVIKVIANELTIIDHPVSDDDLTLYILNGLGPKFREIAAPIRAHETS 146

Query: 61  INFDELYDKLVDFEIF 76
           + F E++D LV +E +
Sbjct: 147 LKFKEIHDLLVGYESY 162


>A5C013_VITVI (tr|A5C013) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_026066 PE=4 SV=1
          Length = 532

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 44/71 (61%)

Query: 6   TSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPINFDE 65
           T  V ++LH I+ I D+L +  H + + DL ++ LN LGP F E    +RAC++ + F+E
Sbjct: 164 TRTVTEFLHGIKVIFDELAIIDHPVSDDDLTLYILNGLGPEFIEIATPIRACETSLKFEE 223

Query: 66  LYDKLVDFEIF 76
           ++D LV  E +
Sbjct: 224 IHDLLVGHESY 234


>A5AGN2_VITVI (tr|A5AGN2) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_024007 PE=4 SV=1
          Length = 1144

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)

Query: 1   MVTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSP 60
           ++ +    + +YLH+++ + D++ L  H I + D+ ++ LN LGP F E  A +RA +  
Sbjct: 143 LIQRGNRPILEYLHAVKGLDDEIALMDHPISDDDITLYVLNGLGPEFREIAAPIRAREKS 202

Query: 61  INFDELYDKLVDFEIFDKHEDHFHTAPPVTANFCK----LLGSHGRSKNNSHNASPSTK 115
           + F+EL+D L+  E + +  +         ANF         S  +  ++  N SP ++
Sbjct: 203 LAFEELHDLLIGHENYLRRMEAATQQLGAAANFTSRRSGFSASQQQKASHKGNGSPRSQ 261


>A5B160_VITVI (tr|A5B160) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_033535 PE=4 SV=1
          Length = 1390

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 1/126 (0%)

Query: 1   MVTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSP 60
           ++ + +  V ++ H+++ I D+L+L    + + DL ++ LN LG  F + +A +R  ++ 
Sbjct: 509 LIQRGSRTVSEFFHAVKVIVDELSLIDAPVSDDDLTLYVLNGLGSEFRDMVAPIRMRETA 568

Query: 61  INFDELYDKLVDFEIFDKHEDHFHTAPPVTANFCKLLGSHGRSKNN-SHNASPSTKKILT 119
           ++F +L+D L+  E + K  D   +   VT N  +    + R KNN +H+   S+ K  T
Sbjct: 569 LSFAKLHDLLIGHEHYLKRMDGNSSTLVVTTNSSQQKSLNPRFKNNKNHSKQNSSNKTPT 628

Query: 120 SESSVI 125
            +SSV+
Sbjct: 629 KKSSVV 634


>A5CBM0_VITVI (tr|A5CBM0) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_001478 PE=4 SV=1
          Length = 1354

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%)

Query: 3   TKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPIN 62
           +K T  V D+LHS+R+  D+L +    ++  DL    L+ LG  + E + +V+A D+ I+
Sbjct: 264 SKGTMTVTDFLHSVRARTDELAILGAPMEEEDLTEKILDGLGDEYKELVRAVQARDTSIS 323

Query: 63  FDELYDKLVDFEIFDKHEDHFHTAPPVTAN 92
           FDEL++KL+ FE             P+TAN
Sbjct: 324 FDELHEKLLSFEASLLANTKSEVNLPITAN 353


>A5C275_VITVI (tr|A5C275) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_029336 PE=4 SV=1
          Length = 1044

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 1   MVTKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSP 60
           ++ +    + +YLH ++ + D++ L  H I + D+ ++ LN LGP F E  A +RA +  
Sbjct: 19  LIQRGNRPILEYLHVVKGMADEIALXDHPISDDDITLYVLNGLGPEFXEIAAPIRAREKS 78

Query: 61  INFDELYDKLVDFEIFDKHEDHFHTAPPVTANFCK----LLGSHGRSKNNSHNASPSTK 115
           + F+EL+D L+  E + +  +          NF         S  +  ++  N SP ++
Sbjct: 79  LAFEELHDLLIGHENYLRRMEAATQQLXAAXNFTSRRXGFSASQQQKASHKGNGSPRSQ 137


>A5BG64_VITVI (tr|A5BG64) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_028360 PE=4 SV=1
          Length = 348

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 46/72 (63%)

Query: 3   TKRTSFVRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPIN 62
           +K T  V D+LH +R+  D+L +    I+  DL    L++LG  + E + +V+A D+ I+
Sbjct: 140 SKGTMTVTDFLHFVRARTDELAILGAPIEEEDLTEKILDVLGDEYKEPVRAVQARDTSIS 199

Query: 63  FDELYDKLVDFE 74
           FDEL++KL+ FE
Sbjct: 200 FDELHEKLLSFE 211


>A5C7A6_VITVI (tr|A5C7A6) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_040762 PE=4 SV=1
          Length = 590

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 10/118 (8%)

Query: 9   VRDYLHSIRSIGDKLTLYCHHIDNLDLVIHALNILGPSFCEFIASVRACDSPINFDELYD 68
           + +YLHS+++I D+L L    +   D+ ++ L+ LG  F + +A +RA +S ++F+EL+D
Sbjct: 137 ITEYLHSVKTIADELALIDAPLSQDDITLYVLHGLGSDFRDIVAPIRARESSLSFEELHD 196

Query: 69  KLVDFEIFDKHEDHFHTAPPVTANFCK----------LLGSHGRSKNNSHNASPSTKK 116
            L+  E + +  D    +  VTAN  +             ++ +SKN+S + S  +K+
Sbjct: 197 LLLGHEAYLRRLDSTAQSLVVTANTTQRRDSRSSKNQSSSTYQQSKNDSKSKSRQSKQ 254