Miyakogusa Predicted Gene

Lj0g3v0336359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336359.1 tr|G7K3G7|G7K3G7_MEDTR DNA polymerase OS=Medicago
truncatula GN=MTR_5g092100 PE=3
SV=1,34.44,0.000000000000001,seg,NULL,CUFF.22989.1
         (216 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7J1V4_MEDTR (tr|G7J1V4) DNA polymerase OS=Medicago truncatula G...   147   2e-33
G7J1V6_MEDTR (tr|G7J1V6) DNA polymerase OS=Medicago truncatula G...   116   4e-24
I1JJ76_SOYBN (tr|I1JJ76) Uncharacterized protein OS=Glycine max ...    78   2e-12
G7K3G7_MEDTR (tr|G7K3G7) DNA polymerase OS=Medicago truncatula G...    74   3e-11
K7M4K7_SOYBN (tr|K7M4K7) Uncharacterized protein OS=Glycine max ...    72   1e-10
K7M4K6_SOYBN (tr|K7M4K6) Uncharacterized protein OS=Glycine max ...    72   1e-10

>G7J1V4_MEDTR (tr|G7J1V4) DNA polymerase OS=Medicago truncatula GN=MTR_3g050110
           PE=3 SV=1
          Length = 1112

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 128/235 (54%), Gaps = 22/235 (9%)

Query: 1   MGVSSQSTPFRPPYYCXXXXXXXXXXXXXXXXXXXXXXFSASSGSLHPSRRKIQSIQVAN 60
           M VSSQST FR  YYC                      F A+ GS   SRRK +SIQ+A+
Sbjct: 1   MRVSSQSTAFRSTYYCPSCFSFSSSSSRPFRSSLSSLGFFANYGSSQHSRRKSKSIQIAS 60

Query: 61  DVLHNSTGSVNCLQSREVSYCLKRPSFGLNKFNVMRHNHNSPVHISAMKFSTTSCSMLEE 120
           + L +   S + LQ RE SYC KR SFGL K N M ++ NSPVHIS MKFST S S L+ 
Sbjct: 61  NFLRHRNLSGSSLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHISVMKFSTASFSTLKV 120

Query: 121 KNQMTAGENLSSY-SYEKQVKMMR-----------------GGDELGWAMRVNDLSKRKK 162
            NQ    E LSS  SY++QV+MM                   GD  GWA   + L++ K 
Sbjct: 121 TNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTPRRKLSGDRTGWAEAGHKLTQIKM 180

Query: 163 EVCALNPRCSYPSNT---TASDDQK-HVSKKRGHNLMLQDLGVPASSSVERSILN 213
           E+  L+ R  YPSNT    +S  QK  +++  GHNLML DL  PASSSV+ S+LN
Sbjct: 181 EMHDLDKRSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLCEPASSSVQHSMLN 235


>G7J1V6_MEDTR (tr|G7J1V6) DNA polymerase OS=Medicago truncatula GN=MTR_3g050140
           PE=3 SV=1
          Length = 1098

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 116/236 (49%), Gaps = 38/236 (16%)

Query: 1   MGVSSQSTPFRPPYYCXXXXXXXXXXXXXXXXXXXXXX-FSASSGSLHPSRRKIQSIQVA 59
           M VSSQST FR  +YC                       F A+ GS     R        
Sbjct: 1   MRVSSQSTAFRSTFYCPSCFSFSSSSSSRPFRSSLSSLGFFANYGSSQHRHR-------- 52

Query: 60  NDVLHNSTGSVNCLQSREVSYCLKRPSFGLNKFNVMRHNHNSPVHISAMKFSTTSCSMLE 119
                N +GS   LQ RE SYC KR SFGL K N M ++ NSPVHIS MKFST S S L+
Sbjct: 53  -----NLSGSF--LQFREGSYCPKRISFGLKKCNDMEYHRNSPVHISVMKFSTASFSTLK 105

Query: 120 EKNQMTAGENLSSY-SYEKQVKMMR-----------------GGDELGWAMRVNDLSKRK 161
             NQ    E LSS  SY++QV+MM                   GD  GWA   + L++ K
Sbjct: 106 VTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTPRRKLSGDRTGWAEAGHKLTQIK 165

Query: 162 KEVCALNPRCSYPSNT---TASDDQK-HVSKKRGHNLMLQDLGVPASSSVERSILN 213
            E+  L+ R  YPSNT    +S  QK  +++  G NLML DL  PASSSV+ S+LN
Sbjct: 166 MEMHDLDKRSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLN 221


>I1JJ76_SOYBN (tr|I1JJ76) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 1077

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 96/202 (47%), Gaps = 35/202 (17%)

Query: 45  SLHPS----RRKIQSIQVANDVLHNSTGSVNCLQSR-EVSYCLKRPSFGLNKFNVMRHNH 99
           SL PS    RRK+QS Q++ + L NST   N +QSR + S CLK  S GLNK+N  R+  
Sbjct: 25  SLLPSQPLQRRKMQSFQISYNGLRNSTVLRNFVQSRADFSCCLKGTSVGLNKYNGARYKR 84

Query: 100 N----SPVHISAMKFSTTS------------------CSMLEEKNQMTAGENLSSYSYEK 137
           N    SPV IS+MK S  S                  C M      M A  N   +S   
Sbjct: 85  NFLCKSPVCISSMKISNASTGTLEEMTEEEELNSLRPCEMQVRTVGMAACNN--EFSTTT 142

Query: 138 QVKMMRGGDELGWAMRVNDLSKRKKEVCALN----PRCSY-PSNTTASDDQKHVSKKRGH 192
             K + GGD  GW M  + L++ KKE+   N       S+  SN  AS  Q     + G 
Sbjct: 143 LGKKLSGGDYRGWTMAKDKLTENKKEMNGSNKFERENGSFSASNGIASIAQNQAVPRNGD 202

Query: 193 NLM-LQDLGVPASSSVERSILN 213
           +++ LQD G  A SSV  S+LN
Sbjct: 203 SIIVLQDPGTHAPSSVNYSVLN 224


>G7K3G7_MEDTR (tr|G7K3G7) DNA polymerase OS=Medicago truncatula GN=MTR_5g092100
           PE=3 SV=1
          Length = 1084

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 32/194 (16%)

Query: 48  PSRRKIQSIQVANDVLHNSTGSVNCLQSREVSYCLKRPSFGLNKFNVMRHNHN----SPV 103
           P RRKI++IQ+A++ L NST   NC+++  +  C K  S GLN+ +   + HN    +PV
Sbjct: 39  PHRRKIKAIQIASNGLRNSTMHSNCVRADLL--CTKLTSLGLNEHSNTGYKHNFPYKNPV 96

Query: 104 HISAMKFSTTSCSMLEEKNQMTAGENLSSYSYEKQV------------------KMMRGG 145
            ++ MKFS  S SMLEE          SS+S E QV                  + + GG
Sbjct: 97  RVTLMKFSNASASMLEEMMVEEEVN--SSHSSEMQVRKVDVAPCNPELSTTATERKLAGG 154

Query: 146 DELGWAMRVNDLSKRKKEVCALNPRCSYPSNTTASDDQKHVSKKRG------HNLMLQDL 199
           D  GW +  N L++ KKE+   N      + +  S+    + +++G       NL+ Q  
Sbjct: 155 DNRGWTLAKNKLAEGKKEMNGTNRYERKSNGSHVSNRFASIGRRQGSSTDVVSNLVRQGH 214

Query: 200 GVPASSSVERSILN 213
           G   SSSV+ S+LN
Sbjct: 215 GEHVSSSVQYSVLN 228


>K7M4K7_SOYBN (tr|K7M4K7) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 1074

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 94/193 (48%), Gaps = 34/193 (17%)

Query: 50  RRKIQSIQVANDVLHNSTGSVNCLQSR-EVSYCLKRPSFGLNKFNVMRHNHN----SPVH 104
           RRK+QS  ++   L NST   N + SR + S CLK  S GLNK+N +R+  N    SPV 
Sbjct: 35  RRKMQSFHIS---LRNSTVLRNYVLSRADFSCCLKGTSAGLNKYNGVRYKGNFLCKSPVC 91

Query: 105 ISAMKFSTTSCSMLEEKNQMTAGENLSSYSYEKQVKMM------------------RGGD 146
           IS+MK S  S S LEE  +     +L  +S E QV+ M                   GGD
Sbjct: 92  ISSMKISNASTSTLEEMTEEEELNSL--HSCETQVRTMGMASCNNEFSTTTSGKKLSGGD 149

Query: 147 ELGWAMRVNDLSKRKKEVCALNPRCSY-----PSNTTASDDQKHVSKKRGH-NLMLQDLG 200
             GW +  + L++ KKE+   N   S       SN  AS DQ     K G  N++LQD G
Sbjct: 150 YRGWTIAKDKLTENKKEMNGSNKFESENGSFCASNGVASIDQNQAVPKNGDSNIVLQDPG 209

Query: 201 VPASSSVERSILN 213
               SSV  S+LN
Sbjct: 210 AHVPSSVNYSVLN 222


>K7M4K6_SOYBN (tr|K7M4K6) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 1090

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 94/193 (48%), Gaps = 34/193 (17%)

Query: 50  RRKIQSIQVANDVLHNSTGSVNCLQSR-EVSYCLKRPSFGLNKFNVMRHNHN----SPVH 104
           RRK+QS  ++   L NST   N + SR + S CLK  S GLNK+N +R+  N    SPV 
Sbjct: 51  RRKMQSFHIS---LRNSTVLRNYVLSRADFSCCLKGTSAGLNKYNGVRYKGNFLCKSPVC 107

Query: 105 ISAMKFSTTSCSMLEEKNQMTAGENLSSYSYEKQVKMM------------------RGGD 146
           IS+MK S  S S LEE  +     +L  +S E QV+ M                   GGD
Sbjct: 108 ISSMKISNASTSTLEEMTEEEELNSL--HSCETQVRTMGMASCNNEFSTTTSGKKLSGGD 165

Query: 147 ELGWAMRVNDLSKRKKEVCALNPRCSY-----PSNTTASDDQKHVSKKRGH-NLMLQDLG 200
             GW +  + L++ KKE+   N   S       SN  AS DQ     K G  N++LQD G
Sbjct: 166 YRGWTIAKDKLTENKKEMNGSNKFESENGSFCASNGVASIDQNQAVPKNGDSNIVLQDPG 225

Query: 201 VPASSSVERSILN 213
               SSV  S+LN
Sbjct: 226 AHVPSSVNYSVLN 238