Miyakogusa Predicted Gene
- Lj0g3v0334789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334789.1 Non Chatacterized Hit- tr|D7TDH9|D7TDH9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.31,1e-17,seg,NULL;
coiled-coil,NULL,gene.Ljchr0_pseudomol_20120828.path1.gene34631.1
(130 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1KXD4_SOYBN (tr|I1KXD4) Uncharacterized protein OS=Glycine max ... 102 6e-20
D7TDH9_VITVI (tr|D7TDH9) Putative uncharacterized protein OS=Vit... 95 7e-18
F6HHW3_VITVI (tr|F6HHW3) Putative uncharacterized protein OS=Vit... 94 2e-17
A5B5A7_VITVI (tr|A5B5A7) Putative uncharacterized protein OS=Vit... 94 2e-17
B9HTW6_POPTR (tr|B9HTW6) Predicted protein (Fragment) OS=Populus... 91 1e-16
B9SHC6_RICCO (tr|B9SHC6) Putative uncharacterized protein OS=Ric... 88 1e-15
M4E742_BRARP (tr|M4E742) Uncharacterized protein OS=Brassica rap... 79 4e-13
E5GBI3_CUCME (tr|E5GBI3) RNA splicing factor OS=Cucumis melo sub... 74 1e-11
R0GW83_9BRAS (tr|R0GW83) Uncharacterized protein OS=Capsella rub... 74 2e-11
K4D9N8_SOLLC (tr|K4D9N8) Uncharacterized protein OS=Solanum lyco... 72 5e-11
D7KNF4_ARALL (tr|D7KNF4) Putative uncharacterized protein OS=Ara... 72 6e-11
M0S4E3_MUSAM (tr|M0S4E3) Uncharacterized protein OS=Musa acumina... 70 3e-10
M0ZHV6_SOLTU (tr|M0ZHV6) Uncharacterized protein OS=Solanum tube... 70 3e-10
M5XT06_PRUPE (tr|M5XT06) Uncharacterized protein OS=Prunus persi... 67 1e-09
K3XFL6_SETIT (tr|K3XFL6) Uncharacterized protein OS=Setaria ital... 62 7e-08
B4FIV5_MAIZE (tr|B4FIV5) Uncharacterized protein OS=Zea mays PE=... 62 1e-07
B4FL04_MAIZE (tr|B4FL04) Uncharacterized protein OS=Zea mays PE=... 61 1e-07
C5XIX4_SORBI (tr|C5XIX4) Putative uncharacterized protein Sb03g0... 59 5e-07
M0Z0N8_HORVD (tr|M0Z0N8) Uncharacterized protein (Fragment) OS=H... 57 2e-06
F2DDC8_HORVD (tr|F2DDC8) Predicted protein OS=Hordeum vulgare va... 56 4e-06
M7YHP1_TRIUA (tr|M7YHP1) CRS2-associated factor 2, chloroplastic... 56 4e-06
A5AWK6_VITVI (tr|A5AWK6) Putative uncharacterized protein OS=Vit... 55 8e-06
>I1KXD4_SOYBN (tr|I1KXD4) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 593
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 82/147 (55%), Gaps = 18/147 (12%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPS-EDGEKGS 59
MLSLWK A+ SSKALLL+E+ LGPDALLEKV+EF+ +SQA EHS+PAF L S E+ +GS
Sbjct: 448 MLSLWKRAIQSSKALLLDEFNLGPDALLEKVEEFDTVSQALEHSHPAFSLSSKENDAEGS 507
Query: 60 FANFE--------------IGTEDGYPSDSL--LAXXXXXXXXXXXXXXXXXXXXXXGLY 103
ANFE ED Y SD+L LY
Sbjct: 508 SANFENSYSSDGLHTEEDYAKFEDSYSSDALQTEEEEEEEEDEDEDEDEDYYDDEDDDLY 567
Query: 104 DIVDSSAQPRSLPVDKIVNKLKPRQAE 130
VD+SAQP SLPVD IV KLK R E
Sbjct: 568 -AVDTSAQPGSLPVDMIVKKLKQRPLE 593
>D7TDH9_VITVI (tr|D7TDH9) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_01s0127g00410 PE=4 SV=1
Length = 561
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+SLWKSA++SSKALLL+E LGPDALL+ V+EFEGISQATEHSYPA ++ SEDG G+
Sbjct: 447 MMSLWKSAIESSKALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTK 506
Query: 61 ANFEIGTEDGYPSDSL 76
A +E + Y D +
Sbjct: 507 AEYEGYNSEDYSEDEM 522
>F6HHW3_VITVI (tr|F6HHW3) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_01s0127g00300 PE=4 SV=1
Length = 555
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+SLWKSA++SSKALLL+E LGPDALL+ V+EFEGISQATEHSYPA ++ SEDG G+
Sbjct: 411 MMSLWKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTK 470
Query: 61 ANFEIGTEDGYPSDSL 76
A E + Y D +
Sbjct: 471 AEHEGYNSEDYSEDEM 486
>A5B5A7_VITVI (tr|A5B5A7) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_034260 PE=4 SV=1
Length = 306
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+SLWKSA++SSKALLL+E LGPDALL+ V+EFEGISQATEHSYPA ++ SEDG G+
Sbjct: 191 MMSLWKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTK 250
Query: 61 ANFEIGTEDGYPSDSL 76
A E + Y D +
Sbjct: 251 AEXEGYNSEDYSEDEM 266
>B9HTW6_POPTR (tr|B9HTW6) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_230630 PE=4 SV=1
Length = 506
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+ LWK A++S+KA+LL+E +LGPDALL KV+EFEGISQATEHSYPA ++ SEDG S
Sbjct: 394 MMLLWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSI 453
Query: 61 ANFE 64
+ FE
Sbjct: 454 STFE 457
>B9SHC6_RICCO (tr|B9SHC6) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0529220 PE=4 SV=1
Length = 561
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+SLW+ A++SSKA+LL++ +LGPD LL KV+EFE ISQATEHSYPA IL SEDG +
Sbjct: 443 MMSLWECAIESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSEDGANNTV 502
Query: 61 ANFEIGTEDGYPSDSLLAXXXXXXXXXXXXXXXXXXXXXXGLYDIVDSSAQPRSLPVDKI 120
A F DSL ++ VD++ SLPVD++
Sbjct: 503 AAFG--------DDSLSGSFTEEDDTYTDDEYEDDEYYDSDSFEEVDTAVPLGSLPVDRL 554
Query: 121 VNKL 124
+L
Sbjct: 555 AERL 558
>M4E742_BRARP (tr|M4E742) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra024597 PE=4 SV=1
Length = 556
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDG 55
M+SLWK AV+SSKA++LEE +L PD LLEKV+EFEG SQA EH++ A +LP DG
Sbjct: 447 MISLWKRAVESSKAVILEELDLTPDVLLEKVEEFEGTSQAAEHTFTALVLPGNDG 501
>E5GBI3_CUCME (tr|E5GBI3) RNA splicing factor OS=Cucumis melo subsp. melo PE=4
SV=1
Length = 603
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSED-GEKGS 59
M LW+ A+DS+KAL+L+E L PD LLE+V+EFE ISQATEHSYPAFI SE+
Sbjct: 495 MKLLWERAIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYPAFITSSEEVSSPAD 554
Query: 60 FANFEIGTEDGYPSDSLLAXXXXXXXXXXXXXXXXXXXXXXGLYDIVDSSAQPRSLPVDK 119
+ +E Y SD + L+D VD SLPVD
Sbjct: 555 SPESQDHSEANYNSDDDVGREED-------------------LFDNVDPLVPLGSLPVDI 595
Query: 120 IVNKL 124
I KL
Sbjct: 596 IAKKL 600
>R0GW83_9BRAS (tr|R0GW83) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008723mg PE=4 SV=1
Length = 565
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDG 55
M+SLWK A+++SKA++LEE +LGPD LL+KV+E EG S A EH+Y A +LP DG
Sbjct: 455 MISLWKRALETSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTALVLPDSDG 509
>K4D9N8_SOLLC (tr|K4D9N8) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc11g066300.1 PE=4 SV=1
Length = 563
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSE 53
M+SLWK+A+DS KALLL++ +L PD LL KV+EF ISQA EH+YPA +L S+
Sbjct: 447 MMSLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVLSSK 499
>D7KNF4_ARALL (tr|D7KNF4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_335585 PE=4 SV=1
Length = 565
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDG 55
M+SLWK A++SSKA++LEE +LGPD LL+KV+E EG S A EHSY A +L + DG
Sbjct: 456 MISLWKRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHSYTAMVLSNTDG 510
>M0S4E3_MUSAM (tr|M0S4E3) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 617
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 42/51 (82%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILP 51
MLSLWK AV++ KA LL++ +L PD+LL++V++FEG+SQ EHSY A ILP
Sbjct: 492 MLSLWKRAVETGKAFLLDDTKLSPDSLLKRVEDFEGLSQIVEHSYQALILP 542
>M0ZHV6_SOLTU (tr|M0ZHV6) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401000410 PE=4 SV=1
Length = 564
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFIL 50
M SLWK+A+DS KALLL++ +L PD LL KV+EF ISQA EH+YPA +L
Sbjct: 447 MKSLWKNAIDSGKALLLDDIDLKPDDLLNKVEEFASISQAIEHTYPALVL 496
>M5XT06_PRUPE (tr|M5XT06) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa003604mg PE=4 SV=1
Length = 562
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 1 MLSLWKSAVDSSKALLLEEYELGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEKGSF 60
M+SLWK ++DS+KALLL+E +L PDALL+KV+EFEG+SQATEHSYPA I+ SEDG S
Sbjct: 448 MMSLWKRSIDSNKALLLDELDLDPDALLKKVEEFEGVSQATEHSYPALIVSSEDGTSSSV 507
Query: 61 ANFE 64
FE
Sbjct: 508 QVFE 511
>K3XFL6_SETIT (tr|K3XFL6) Uncharacterized protein OS=Setaria italica
GN=Si000685m.g PE=4 SV=1
Length = 624
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 13/71 (18%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LW+SAVDSS ALLL++ E L PD+LL +V+EF SQA EHS+PA ++
Sbjct: 500 MFKLWESAVDSSLALLLDDAEANDLTPDSLLTRVEEFSVTSQAVEHSFPALLV------- 552
Query: 58 GSFANFEIGTE 68
AN E+ TE
Sbjct: 553 ---ANCEVNTE 560
>B4FIV5_MAIZE (tr|B4FIV5) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 125
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LWKSAVDSS ALLL++ E L PD+LL V+EF SQA EHS+PA ++ + D
Sbjct: 1 MFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDAST 60
Query: 58 GSFA 61
S +
Sbjct: 61 DSLS 64
>B4FL04_MAIZE (tr|B4FL04) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 611
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LWKSAVDSS ALLL++ E L PD+LL V+EF SQA EHS+PA ++ + D
Sbjct: 487 MFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDAST 546
Query: 58 GSFA 61
S +
Sbjct: 547 DSLS 550
>C5XIX4_SORBI (tr|C5XIX4) Putative uncharacterized protein Sb03g013160 OS=Sorghum
bicolor GN=Sb03g013160 PE=4 SV=1
Length = 614
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 13/71 (18%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LWKSAVDSS ALLL++ E L PD+LL V+EF SQA EHS+PA ++
Sbjct: 489 MFKLWKSAVDSSLALLLDDAEANDLTPDSLLTLVEEFSVTSQAVEHSFPALLV------- 541
Query: 58 GSFANFEIGTE 68
N E+ TE
Sbjct: 542 ---TNGEVNTE 549
>M0Z0N8_HORVD (tr|M0Z0N8) Uncharacterized protein (Fragment) OS=Hordeum vulgare
var. distichum PE=4 SV=1
Length = 252
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LWK A++SS AL L++ E L PD LL +V+EF SQA EHS+PA ++ + G
Sbjct: 130 MFKLWKRAIESSIALSLDDDETNALTPDTLLVRVEEFSVTSQAVEHSFPALLVGNVKGGP 189
Query: 58 GSFANFEIGTEDG 70
+ E G++DG
Sbjct: 190 EAVNESENGSDDG 202
>F2DDC8_HORVD (tr|F2DDC8) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 607
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFILPSEDGEK 57
M LWK A++SS AL L++ E L PD LL +V+EF SQA EHS+PA ++ + G
Sbjct: 485 MFKLWKRAIESSIALSLDDDETNALTPDTLLVRVEEFSVTSQAVEHSFPALLVGNVKGGP 544
Query: 58 GSFANFEIGTEDG 70
+ E G++DG
Sbjct: 545 EAVNESENGSDDG 557
>M7YHP1_TRIUA (tr|M7YHP1) CRS2-associated factor 2, chloroplastic OS=Triticum
urartu GN=TRIUR3_32125 PE=4 SV=1
Length = 262
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 1 MLSLWKSAVDSSKALLLEEYE---LGPDALLEKVQEFEGISQATEHSYPAFIL 50
M LWK A++SS ALLL++ E L PD LL +V+EF SQA EHS+PA ++
Sbjct: 144 MFKLWKRAIESSIALLLDDDEANALAPDTLLMRVEEFSITSQAVEHSFPALLV 196
>A5AWK6_VITVI (tr|A5AWK6) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_024772 PE=4 SV=1
Length = 131
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 28 LEKVQEFEGISQATEHSYPAFILPSEDGEKGSFANFEIGTEDGYPSDSL 76
L+ V+EFEGISQATEHSYPA ++ SEDG G+ A +E + Y D +
Sbjct: 44 LKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYEGCNSEDYSEDEM 92