Miyakogusa Predicted Gene

Lj0g3v0329669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329669.1 Non Chatacterized Hit- tr|J3N277|J3N277_ORYBR
Uncharacterized protein (Fragment) OS=Oryza
brachyanth,61.19,0.000000000000008,seg,NULL,CUFF.22449.1
         (117 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J3N277_ORYBR (tr|J3N277) Uncharacterized protein (Fragment) OS=O...    84   2e-14
J3L2P5_ORYBR (tr|J3L2P5) Uncharacterized protein OS=Oryza brachy...    69   8e-10
J3M8W5_ORYBR (tr|J3M8W5) Uncharacterized protein OS=Oryza brachy...    59   6e-07

>J3N277_ORYBR (tr|J3N277) Uncharacterized protein (Fragment) OS=Oryza
          brachyantha GN=OB10G16250 PE=4 SV=1
          Length = 70

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 48/67 (71%)

Query: 14 PFLASGVPYLSLDSFAIDDEGFGLKLDADGGFGIDVELVPRKPSEKLGLADGGVTDQHHF 73
          P LA GVP L LD   +DDEG GL+LDADGG G+D ELV  +  E LGLADG V D+HH 
Sbjct: 4  PLLAGGVPDLGLDGLVVDDEGAGLELDADGGLGVDAELVAGEAREDLGLADGRVADEHHL 63

Query: 74 ENVIDLL 80
          E+V+ LL
Sbjct: 64 EDVVHLL 70


>J3L2P5_ORYBR (tr|J3L2P5) Uncharacterized protein OS=Oryza brachyantha
          GN=OB01G35010 PE=4 SV=1
          Length = 89

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 40/62 (64%)

Query: 14 PFLASGVPYLSLDSFAIDDEGFGLKLDADGGFGIDVELVPRKPSEKLGLADGGVTDQHHF 73
          P LA GVP L LD   +D +G G +LDADGG G+  ELVPR+P +++ L    V DQHH 
Sbjct: 6  PLLAGGVPDLGLDELVVDADGLGGELDADGGPGLQAELVPREPRQQVRLPHAAVPDQHHL 65

Query: 74 EN 75
          E 
Sbjct: 66 EQ 67


>J3M8W5_ORYBR (tr|J3M8W5) Uncharacterized protein OS=Oryza brachyantha
          GN=OB05G30390 PE=4 SV=1
          Length = 137

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 38/59 (64%)

Query: 11 NAEPFLASGVPYLSLDSFAIDDEGFGLKLDADGGFGIDVELVPRKPSEKLGLADGGVTD 69
           A P LA GVP L LD  A+D E  G +LDADGG G++ ELV  +  E++GLA  GV D
Sbjct: 13 RAVPLLAGGVPNLGLDDLAVDLEAAGGELDADGGLGLEAELVLGEAGEEVGLAHAGVAD 71