Miyakogusa Predicted Gene

Lj0g3v0327109.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327109.1 Non Chatacterized Hit- tr|I3SCE2|I3SCE2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,36.29,2e-18,no
description,Nucleic acid-binding, OB-fold; Nucleic acid-binding
proteins,Nucleic acid-binding, OB,CUFF.22661.1
         (157 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SCE2_LOTJA (tr|I3SCE2) Uncharacterized protein OS=Lotus japoni...    87   3e-15
I3S5P4_LOTJA (tr|I3S5P4) Uncharacterized protein OS=Lotus japoni...    60   2e-07

>I3SCE2_LOTJA (tr|I3SCE2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 406

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 70/113 (61%)

Query: 1   MLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGKFLIEGTPV 60
           M+ +++ D +GK+ C L G  V IV DYL+SN  ++PV+  Q  K+KSF+GK +++    
Sbjct: 158 MMLLEISDDKGKLECALFGEYVQIVLDYLSSNPLEKPVVVLQLAKLKSFRGKNVLQNVMK 217

Query: 61  SSKVHFNPNIHDAIELTKRLDVLGLNYHGPVGFIPTNESNLSLRDEMLNTYPR 113
           +S++ FNP + +A  L  R+  L +  + PVG I +   ++ + ++ +N YP+
Sbjct: 218 ASRIIFNPEVAEAESLMDRISGLNMQPNQPVGHIISPNPSVPIFEDFMNNYPK 270


>I3S5P4_LOTJA (tr|I3S5P4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 333

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%)

Query: 1   MLHIDLQDSRGKIRCLLIGSLVNIVADYLASNWTKRPVIAFQFVKVKSFKGKFLIEGTPV 60
           ++ ++L D  G +  +++G  V++V+DYL+S+  ++P++  Q+ K+K F+GK L+     
Sbjct: 124 IMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIP 183

Query: 61  SSKVHFNPNIHDAIELTKRLDVLGLNYHGPVGFIPTNESNLSLRDEMLNTYP 112
            S +H N    +A    KR++       G VG I   +    + D++   YP
Sbjct: 184 VSTIHLNQEFEEAKAFRKRMNGHSREIEGHVGDIDFFDFAYPMIDDVKIVYP 235