Miyakogusa Predicted Gene

Lj0g3v0321829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0321829.1 Non Chatacterized Hit- tr|J3L9B6|J3L9B6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G1,44.68,5e-19,seg,NULL,CUFF.21820.1
         (145 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1JCL8_SOYBN (tr|I1JCL8) Uncharacterized protein OS=Glycine max ...    72   5e-11
G7LDV4_MEDTR (tr|G7LDV4) CCP OS=Medicago truncatula GN=MTR_8g076...    70   2e-10
Q6NLP0_ARATH (tr|Q6NLP0) At3g26750 OS=Arabidopsis thaliana GN=At...    60   3e-07
Q9LW36_ARATH (tr|Q9LW36) Genomic DNA, chromosome 3, P1 clone: MD...    60   3e-07
R0FMV6_9BRAS (tr|R0FMV6) Uncharacterized protein OS=Capsella rub...    60   4e-07
J3L9B6_ORYBR (tr|J3L9B6) Uncharacterized protein OS=Oryza brachy...    56   4e-06

>I1JCL8_SOYBN (tr|I1JCL8) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 584

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXX--XXXXXXXXXQPSSRPLSMDSDVEN 125
           P+PA VL+D D+P  FR LSDHIEVK                    P   PL   SDV+ 
Sbjct: 88  PLPA-VLVDGDSPVAFRPLSDHIEVKLLLLLPVDHPILSALDLSQTPPPDPLDSQSDVKI 146

Query: 126 LSSHGEVDFYCRTCAFKLTK 145
           LSS GEVDFYCRTCAFKLT+
Sbjct: 147 LSSAGEVDFYCRTCAFKLTR 166


>G7LDV4_MEDTR (tr|G7LDV4) CCP OS=Medicago truncatula GN=MTR_8g076860 PE=4 SV=1
          Length = 557

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXX-XXXXXXXXQPSSRPLSMDSDVENL 126
           PIP  VLLDAD PPT R+ +DHIEVK                   P  +P SMD DV+ L
Sbjct: 71  PIP-NVLLDADFPPTVRSFTDHIEVKLLLLLPVDHPVLSALHQTSPLPQPFSMDYDVDKL 129

Query: 127 SSHGEVDFYCRTCAFKLTK 145
           SS GEV+F CR+C + LTK
Sbjct: 130 SSAGEVEFVCRSCHYGLTK 148


>Q6NLP0_ARATH (tr|Q6NLP0) At3g26750 OS=Arabidopsis thaliana GN=At3g26750 PE=2
           SV=1
          Length = 515

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXXXXXXXXXXQPSSR----PLSMDSDV 123
           PIP RVLLD ++P  F+AL DHIEV+                    SR    PL M  D+
Sbjct: 77  PIP-RVLLDTESPVNFKALDDHIEVRLVLLLPVDHPLVSDFNLVTDSREKSAPLVMGYDL 135

Query: 124 ENLSSHGEVDFYCRTCAFKLTK 145
           + LS  G V FYCR+C+ +LTK
Sbjct: 136 KTLSLMGGVHFYCRSCSNRLTK 157


>Q9LW36_ARATH (tr|Q9LW36) Genomic DNA, chromosome 3, P1 clone: MDJ14
           OS=Arabidopsis thaliana GN=AT3G26750 PE=4 SV=1
          Length = 526

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXXXXXXXXXXQPSSR----PLSMDSDV 123
           PIP RVLLD ++P  F+AL DHIEV+                    SR    PL M  D+
Sbjct: 88  PIP-RVLLDTESPVNFKALDDHIEVRLVLLLPVDHPLVSDFNLVTDSREKSAPLVMGYDL 146

Query: 124 ENLSSHGEVDFYCRTCAFKLTK 145
           + LS  G V FYCR+C+ +LTK
Sbjct: 147 KTLSLMGGVHFYCRSCSNRLTK 168


>R0FMV6_9BRAS (tr|R0FMV6) Uncharacterized protein OS=Capsella rubella
           GN=CARUB_v10017027mg PE=4 SV=1
          Length = 518

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXX----XXXXXXXXXXQPSSRPLSMDSDV 123
           P+P RVLLDA++P  F+AL D+IEV+                     + +S PL M  D+
Sbjct: 81  PVP-RVLLDAESPVNFKALDDYIEVRLVLLLPVDHPLVSDFSLAIDSKENSAPLVMGYDL 139

Query: 124 ENLSSHGEVDFYCRTCAFKLTK 145
           + LS  G V  YCR C+F+LTK
Sbjct: 140 KTLSLMGGVHIYCRNCSFRLTK 161


>J3L9B6_ORYBR (tr|J3L9B6) Uncharacterized protein OS=Oryza brachyantha
           GN=OB02G12330 PE=4 SV=1
          Length = 586

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXXXXXXXXXXQPSS----RPLSMDSDV 123
           P+P RVL+D  APP  RA  DH+EV+                  P       PLS+ +D+
Sbjct: 77  PVP-RVLVDPSAPPECRAAGDHVEVRLALVLPVDHPVVAAAFPPPLGAEPVAPLSLRNDI 135

Query: 124 ENLSSHGEVDFYCRTCAFKLTK 145
           +NLSS G+V  YCR C+ +LTK
Sbjct: 136 KNLSS-GDVHLYCRACSARLTK 156