Miyakogusa Predicted Gene
- Lj0g3v0316659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316659.1 tr|D3BJX8|D3BJX8_POLPA Probable ribosomal large
subunit pseudouridine synthase C protein
OS=Polyspho,35.57,1e-18,PseudoU_synth_2,Pseudouridine synthase,
RsuA/RluB/C/D/E/F; RNA PSEUDOURIDYLATE SYNTHASE FAMILY
PROTE,CUFF.21412.1
(266 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7MNI8_SOYBN (tr|K7MNI8) Uncharacterized protein OS=Glycine max ... 405 e-111
B9SLG9_RICCO (tr|B9SLG9) Ribosomal pseudouridine synthase, putat... 374 e-101
M5WPG3_PRUPE (tr|M5WPG3) Uncharacterized protein OS=Prunus persi... 362 9e-98
D7SS16_VITVI (tr|D7SS16) Putative uncharacterized protein OS=Vit... 362 1e-97
R0HTT9_9BRAS (tr|R0HTT9) Uncharacterized protein OS=Capsella rub... 360 2e-97
M4F1X8_BRARP (tr|M4F1X8) Uncharacterized protein OS=Brassica rap... 359 4e-97
D7KVW3_ARALL (tr|D7KVW3) Putative uncharacterized protein OS=Ara... 357 2e-96
M1B239_SOLTU (tr|M1B239) Uncharacterized protein OS=Solanum tube... 343 2e-92
M0T0M2_MUSAM (tr|M0T0M2) Uncharacterized protein OS=Musa acumina... 339 7e-91
A3BUX1_ORYSJ (tr|A3BUX1) Putative uncharacterized protein OS=Ory... 337 3e-90
I1QK84_ORYGL (tr|I1QK84) Uncharacterized protein OS=Oryza glaber... 337 3e-90
A2YX47_ORYSI (tr|A2YX47) Putative uncharacterized protein OS=Ory... 337 3e-90
K4CED5_SOLLC (tr|K4CED5) Uncharacterized protein OS=Solanum lyco... 336 4e-90
J3MUH2_ORYBR (tr|J3MUH2) Uncharacterized protein OS=Oryza brachy... 335 8e-90
M0ZA50_HORVD (tr|M0ZA50) Uncharacterized protein OS=Hordeum vulg... 334 2e-89
M0ZA48_HORVD (tr|M0ZA48) Uncharacterized protein OS=Hordeum vulg... 333 3e-89
F2D071_HORVD (tr|F2D071) Predicted protein (Fragment) OS=Hordeum... 333 4e-89
M0ZA54_HORVD (tr|M0ZA54) Uncharacterized protein OS=Hordeum vulg... 333 5e-89
K3YHF2_SETIT (tr|K3YHF2) Uncharacterized protein OS=Setaria ital... 332 1e-88
K7UC97_MAIZE (tr|K7UC97) Uncharacterized protein OS=Zea mays GN=... 332 1e-88
C0HH71_MAIZE (tr|C0HH71) Uncharacterized protein OS=Zea mays PE=... 331 2e-88
K7U1X9_MAIZE (tr|K7U1X9) Uncharacterized protein OS=Zea mays GN=... 330 2e-88
C5YIB1_SORBI (tr|C5YIB1) Putative uncharacterized protein Sb07g0... 330 3e-88
I1I8M9_BRADI (tr|I1I8M9) Uncharacterized protein OS=Brachypodium... 327 3e-87
M8BA18_AEGTA (tr|M8BA18) RNA pseudourine synthase 3, mitochondri... 318 1e-84
B9N0H4_POPTR (tr|B9N0H4) Predicted protein (Fragment) OS=Populus... 306 3e-81
M8A4M3_TRIUA (tr|M8A4M3) RNA pseudourine synthase 3, mitochondri... 301 1e-79
M1B240_SOLTU (tr|M1B240) Uncharacterized protein OS=Solanum tube... 261 2e-67
M0ZA53_HORVD (tr|M0ZA53) Uncharacterized protein OS=Hordeum vulg... 233 4e-59
D7UBZ2_VITVI (tr|D7UBZ2) Putative uncharacterized protein OS=Vit... 201 2e-49
B9RY90_RICCO (tr|B9RY90) Ribosomal pseudouridine synthase, putat... 185 1e-44
M5VIW4_PRUPE (tr|M5VIW4) Uncharacterized protein OS=Prunus persi... 181 2e-43
M4E0X7_BRARP (tr|M4E0X7) Uncharacterized protein OS=Brassica rap... 179 7e-43
I1IIQ2_BRADI (tr|I1IIQ2) Uncharacterized protein OS=Brachypodium... 177 2e-42
B9G227_ORYSJ (tr|B9G227) Putative uncharacterized protein OS=Ory... 177 3e-42
G7ZV99_MEDTR (tr|G7ZV99) RNA pseudourine synthase OS=Medicago tr... 177 4e-42
B8BCS6_ORYSI (tr|B8BCS6) Putative uncharacterized protein OS=Ory... 177 4e-42
I1JB03_SOYBN (tr|I1JB03) Uncharacterized protein OS=Glycine max ... 176 1e-41
I1QLT5_ORYGL (tr|I1QLT5) Uncharacterized protein OS=Oryza glaber... 175 1e-41
M5VVR6_PRUPE (tr|M5VVR6) Uncharacterized protein OS=Prunus persi... 175 1e-41
B9HS61_POPTR (tr|B9HS61) Predicted protein (Fragment) OS=Populus... 174 2e-41
M1CF74_SOLTU (tr|M1CF74) Uncharacterized protein OS=Solanum tube... 174 2e-41
M1CF70_SOLTU (tr|M1CF70) Uncharacterized protein OS=Solanum tube... 174 2e-41
M0W6Q7_HORVD (tr|M0W6Q7) Uncharacterized protein OS=Hordeum vulg... 174 2e-41
F2EHA5_HORVD (tr|F2EHA5) Predicted protein OS=Hordeum vulgare va... 174 3e-41
M0W6Q6_HORVD (tr|M0W6Q6) Uncharacterized protein OS=Hordeum vulg... 174 3e-41
R0HY69_9BRAS (tr|R0HY69) Uncharacterized protein OS=Capsella rub... 174 4e-41
J3MVI1_ORYBR (tr|J3MVI1) Uncharacterized protein OS=Oryza brachy... 173 5e-41
M8ARA9_AEGTA (tr|M8ARA9) RNA pseudourine synthase 4, mitochondri... 173 7e-41
J3LQB7_ORYBR (tr|J3LQB7) Uncharacterized protein OS=Oryza brachy... 172 7e-41
K4B2X4_SOLLC (tr|K4B2X4) Uncharacterized protein OS=Solanum lyco... 172 7e-41
M7YVT4_TRIUA (tr|M7YVT4) RNA pseudourine synthase 4, mitochondri... 172 8e-41
M0SLI3_MUSAM (tr|M0SLI3) Uncharacterized protein OS=Musa acumina... 172 8e-41
D7L9Z2_ARALL (tr|D7L9Z2) Pseudouridine synthase family protein O... 171 2e-40
K3YR11_SETIT (tr|K3YR11) Uncharacterized protein OS=Setaria ital... 169 7e-40
C4J8T2_MAIZE (tr|C4J8T2) Uncharacterized protein OS=Zea mays PE=... 169 1e-39
D8SN49_SELML (tr|D8SN49) Putative uncharacterized protein OS=Sel... 162 1e-37
D8SR68_SELML (tr|D8SR68) Putative uncharacterized protein OS=Sel... 162 1e-37
A9RZN1_PHYPA (tr|A9RZN1) Predicted protein (Fragment) OS=Physcom... 156 5e-36
B6U2M4_MAIZE (tr|B6U2M4) RNA binding protein OS=Zea mays PE=2 SV=1 152 1e-34
M1B238_SOLTU (tr|M1B238) Uncharacterized protein OS=Solanum tube... 137 4e-30
M1CF75_SOLTU (tr|M1CF75) Uncharacterized protein OS=Solanum tube... 133 6e-29
D3BJX8_POLPA (tr|D3BJX8) Probable ribosomal large subunit pseudo... 99 2e-18
G8ALK2_AZOBR (tr|G8ALK2) Pseudouridine synthase OS=Azospirillum ... 92 1e-16
R7QAD7_CHOCR (tr|R7QAD7) Stackhouse genomic scaffold, scaffold_1... 91 4e-16
F4QCT4_DICFS (tr|F4QCT4) Putative ribosomal large subunit pseudo... 91 5e-16
Q2G4F0_NOVAD (tr|Q2G4F0) Pseudouridine synthase OS=Novosphingobi... 89 2e-15
F0ZT35_DICPU (tr|F0ZT35) Putative uncharacterized protein OS=Dic... 88 3e-15
E0MJS5_9RHOB (tr|E0MJS5) Pseudouridine synthase OS=Ahrensia sp. ... 87 7e-15
A5PEL5_9SPHN (tr|A5PEL5) Pseudouridine synthase OS=Erythrobacter... 86 1e-14
Q2RQY9_RHORT (tr|Q2RQY9) Pseudouridine synthase OS=Rhodospirillu... 86 1e-14
G2T6N7_RHORU (tr|G2T6N7) Pseudouridine synthase OS=Rhodospirillu... 86 1e-14
H6SNP0_RHOPH (tr|H6SNP0) Pseudouridine synthase OS=Rhodospirillu... 86 1e-14
A3WAF6_9SPHN (tr|A3WAF6) Pseudouridine synthase OS=Erythrobacter... 85 3e-14
R5Q5J4_9PROT (tr|R5Q5J4) Pseudouridine synthase OS=Acetobacter s... 84 4e-14
Q0BUM2_GRABC (tr|Q0BUM2) Pseudouridine synthase OS=Granulibacter... 84 6e-14
A9HLV5_GLUDA (tr|A9HLV5) Pseudouridine synthase OS=Gluconacetoba... 84 7e-14
G6XFU2_9PROT (tr|G6XFU2) Pseudouridine synthase OS=Gluconobacter... 83 8e-14
Q54N28_DICDI (tr|Q54N28) Putative uncharacterized protein OS=Dic... 82 1e-13
F6IMX3_9SPHN (tr|F6IMX3) Pseudouridine synthase OS=Novosphingobi... 82 2e-13
B1ZDT3_METPB (tr|B1ZDT3) Pseudouridine synthase OS=Methylobacter... 82 2e-13
Q2ND80_ERYLH (tr|Q2ND80) Pseudouridine synthase OS=Erythrobacter... 82 2e-13
H8FNW9_RHOMO (tr|H8FNW9) Pseudouridine synthase OS=Phaeospirillu... 82 2e-13
F3SAS2_9PROT (tr|F3SAS2) Pseudouridine synthase OS=Gluconacetoba... 81 3e-13
F3X0E4_9SPHN (tr|F3X0E4) Pseudouridine synthase OS=Sphingomonas ... 81 4e-13
K2MYI4_9RHIZ (tr|K2MYI4) Pseudouridine synthase OS=Nitratireduct... 81 5e-13
G2I1W0_GLUXN (tr|G2I1W0) Pseudouridine synthase OS=Gluconacetoba... 81 5e-13
J2GEH1_9SPHN (tr|J2GEH1) Pseudouridine synthase OS=Novosphingobi... 80 5e-13
D8JXU8_HYPDA (tr|D8JXU8) Pseudouridine synthase OS=Hyphomicrobiu... 80 7e-13
K4HJ60_BARQI (tr|K4HJ60) Pseudouridine synthase OS=Bartonella qu... 80 7e-13
I3TNV3_TISMK (tr|I3TNV3) Ribosomal large subunit pseudouridine s... 80 7e-13
M5F8G2_9RHIZ (tr|M5F8G2) Pseudouridine synthase OS=Mesorhizobium... 80 9e-13
I9WEI4_9SPHN (tr|I9WEI4) Pseudouridine synthase OS=Novosphingobi... 80 9e-13
D5QCH7_GLUHA (tr|D5QCH7) Pseudouridine synthase OS=Gluconacetoba... 80 9e-13
G7ZFW2_AZOL4 (tr|G7ZFW2) Pseudouridine synthase OS=Azospirillum ... 80 1e-12
Q5FQE0_GLUOX (tr|Q5FQE0) Pseudouridine synthase OS=Gluconobacter... 80 1e-12
Q0G6Y2_9RHIZ (tr|Q0G6Y2) Pseudouridine synthase OS=Fulvimarina p... 80 1e-12
J8VB27_9SPHN (tr|J8VB27) Pseudouridine synthase OS=Sphingomonas ... 80 1e-12
F7VAX9_9PROT (tr|F7VAX9) Pseudouridine synthase OS=Acetobacter t... 79 1e-12
M9M9I1_GLUTH (tr|M9M9I1) Ribosomal large subunit pseudouridine s... 79 1e-12
K7SSU6_GLUOY (tr|K7SSU6) Pseudouridine synthase OS=Gluconobacter... 79 1e-12
I5BUQ9_9RHIZ (tr|I5BUQ9) Pseudouridine synthase OS=Nitratireduct... 79 1e-12
F1ZBM1_9SPHN (tr|F1ZBM1) Pseudouridine synthase OS=Novosphingobi... 79 1e-12
D2VTC2_NAEGR (tr|D2VTC2) Predicted protein OS=Naegleria gruberi ... 79 1e-12
Q1GRB1_SPHAL (tr|Q1GRB1) Pseudouridine synthase OS=Sphingopyxis ... 79 1e-12
A9DCN2_9RHIZ (tr|A9DCN2) Pseudouridine synthase OS=Hoeflea photo... 79 1e-12
H1UQ66_ACEPA (tr|H1UQ66) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7JBV6_ACEP3 (tr|C7JBV6) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7L3T3_ACEPA (tr|C7L3T3) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7KU06_ACEPA (tr|C7KU06) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7KJP4_ACEPA (tr|C7KJP4) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7KHV5_ACEPA (tr|C7KHV5) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7K8N6_ACEPA (tr|C7K8N6) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7JYE2_ACEPA (tr|C7JYE2) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
C7JP76_ACEPA (tr|C7JP76) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
H1UGA7_ACEPA (tr|H1UGA7) Pseudouridine synthase OS=Acetobacter p... 79 2e-12
H0HVD7_9RHIZ (tr|H0HVD7) Pseudouridine synthase OS=Mesorhizobium... 79 2e-12
L0KM91_MESAW (tr|L0KM91) Pseudouridine synthase OS=Mesorhizobium... 79 2e-12
I3KRM5_ORENI (tr|I3KRM5) Uncharacterized protein (Fragment) OS=O... 79 2e-12
K9HF45_9PROT (tr|K9HF45) Pseudouridine synthase OS=Caenispirillu... 79 2e-12
G6YI54_9RHIZ (tr|G6YI54) Pseudouridine synthase OS=Mesorhizobium... 79 2e-12
F0J1V0_ACIMA (tr|F0J1V0) Pseudouridine synthase OS=Acidiphilium ... 79 2e-12
A5FUW0_ACICJ (tr|A5FUW0) Pseudouridine synthase OS=Acidiphilium ... 79 2e-12
F7S6D1_9PROT (tr|F7S6D1) Pseudouridine synthase OS=Acidiphilium ... 79 2e-12
M2ZU75_9PROT (tr|M2ZU75) Pseudouridine synthase OS=Magnetospiril... 78 2e-12
I3KRM6_ORENI (tr|I3KRM6) Uncharacterized protein OS=Oreochromis ... 78 2e-12
N0B298_9RHIZ (tr|N0B298) Pseudouridine synthase OS=Hyphomicrobiu... 78 3e-12
K2LKW2_9RHIZ (tr|K2LKW2) Pseudouridine synthase OS=Nitratireduct... 78 3e-12
F8JIE9_HYPSM (tr|F8JIE9) Pseudouridine synthase OS=Hyphomicrobiu... 78 3e-12
K5YQS6_9PROT (tr|K5YQS6) Pseudouridine synthase OS=Acidocella sp... 78 3e-12
M5ERW2_9RHIZ (tr|M5ERW2) Pseudouridine synthase OS=Mesorhizobium... 78 3e-12
K2ETA0_9BACT (tr|K2ETA0) Pseudouridine synthase OS=uncultured ba... 78 3e-12
Q0ANT2_MARMM (tr|Q0ANT2) Pseudouridine synthase OS=Maricaulis ma... 78 3e-12
Q6FZF3_BARQU (tr|Q6FZF3) Pseudouridine synthase OS=Bartonella qu... 78 3e-12
Q98N25_RHILO (tr|Q98N25) Pseudouridine synthase OS=Rhizobium lot... 78 3e-12
K2L0I4_9PROT (tr|K2L0I4) Pseudouridine synthase OS=Thalassospira... 78 3e-12
C6AE97_BARGA (tr|C6AE97) Pseudouridine synthase OS=Bartonella gr... 78 4e-12
E1BYI6_CHICK (tr|E1BYI6) Uncharacterized protein OS=Gallus gallu... 78 4e-12
K7SC90_GLUOY (tr|K7SC90) Pseudouridine synthase OS=Gluconobacter... 78 4e-12
K2L815_9PROT (tr|K2L815) Pseudouridine synthase OS=Thalassospira... 77 4e-12
F1YTQ1_9PROT (tr|F1YTQ1) Pseudouridine synthase OS=Acetobacter p... 77 4e-12
G6XJU4_9PROT (tr|G6XJU4) Pseudouridine synthase OS=Gluconobacter... 77 4e-12
J1JYE3_9RHIZ (tr|J1JYE3) Pseudouridine synthase OS=Bartonella me... 77 4e-12
F2IUX2_POLGS (tr|F2IUX2) Pseudouridine synthase OS=Polymorphum g... 77 4e-12
N7QGF4_BRUSS (tr|N7QGF4) RluA family pseudouridine synthase OS=B... 77 5e-12
M9MJP2_GLUTH (tr|M9MJP2) Ribosomal large subunit pseudouridine s... 77 5e-12
J0PZY9_9RHIZ (tr|J0PZY9) Pseudouridine synthase OS=Bartonella al... 77 5e-12
G9ZW07_9PROT (tr|G9ZW07) Pseudouridine synthase OS=Acetobacterac... 77 7e-12
E8TMF5_MESCW (tr|E8TMF5) Pseudouridine synthase OS=Mesorhizobium... 77 7e-12
D3P5C7_AZOS1 (tr|D3P5C7) Pseudouridine synthase OS=Azospirillum ... 77 7e-12
E6YZV3_BARSR (tr|E6YZV3) Pseudouridine synthase OS=Bartonella sc... 77 8e-12
J7QGV9_METSZ (tr|J7QGV9) Pseudouridine synthase OS=Methylocystis... 77 8e-12
F7YDQ9_MESOW (tr|F7YDQ9) Pseudouridine synthase OS=Mesorhizobium... 77 8e-12
N6VLC0_9RHIZ (tr|N6VLC0) Ribosomal large subunit pseudouridine s... 77 8e-12
G8SP86_BRUCA (tr|G8SP86) Pseudouridine synthase OS=Brucella cani... 77 9e-12
K9HFR5_9PROT (tr|K9HFR5) Pseudouridine synthase OS=Caenispirillu... 76 1e-11
A9MB16_BRUC2 (tr|A9MB16) Pseudouridine synthase OS=Brucella cani... 76 1e-11
N9U452_BRUCA (tr|N9U452) RluA family pseudouridine synthase OS=B... 76 1e-11
N9SBG1_BRUCA (tr|N9SBG1) RluA family pseudouridine synthase OS=B... 76 1e-11
N8GMQ5_BRUSS (tr|N8GMQ5) RluA family pseudouridine synthase OS=B... 76 1e-11
N8BLF8_BRUCA (tr|N8BLF8) RluA family pseudouridine synthase OS=B... 76 1e-11
N7ZWJ1_BRUCA (tr|N7ZWJ1) RluA family pseudouridine synthase OS=B... 76 1e-11
N7KUW6_BRUCA (tr|N7KUW6) RluA family pseudouridine synthase OS=B... 76 1e-11
N7JIF1_BRUCA (tr|N7JIF1) RluA family pseudouridine synthase OS=B... 76 1e-11
D0PJ27_BRUSS (tr|D0PJ27) Pseudouridine synthase OS=Brucella suis... 76 1e-11
D0BBD6_BRUSS (tr|D0BBD6) Pseudouridine synthase OS=Brucella suis... 76 1e-11
M2S9R0_9PROT (tr|M2S9R0) Pseudouridine synthase OS=alpha proteob... 76 1e-11
B7KQM4_METC4 (tr|B7KQM4) Pseudouridine synthase OS=Methylobacter... 76 1e-11
N8G2A5_9RHIZ (tr|N8G2A5) RluA family pseudouridine synthase OS=B... 76 1e-11
Q5LW27_RUEPO (tr|Q5LW27) Pseudouridine synthase OS=Ruegeria pome... 76 1e-11
D6LPU2_9RHIZ (tr|D6LPU2) Pseudouridine synthase OS=Brucella sp. ... 76 1e-11
N1MWV4_9SPHN (tr|N1MWV4) Ribosomal large subunit pseudouridine s... 76 1e-11
A1USS6_BARBK (tr|A1USS6) Pseudouridine synthase OS=Bartonella ba... 76 1e-11
K8Q0Q8_BARBA (tr|K8Q0Q8) Pseudouridine synthase OS=Bartonella ba... 76 1e-11
J6DQG0_9RHIZ (tr|J6DQG0) Pseudouridine synthase OS=Rhizobium sp.... 76 1e-11
I7EII9_PHAGD (tr|I7EII9) Pseudouridine synthase OS=Phaeobacter g... 76 1e-11
I7DTR0_PHAG2 (tr|I7DTR0) Pseudouridine synthase OS=Phaeobacter g... 76 1e-11
G1MQ83_MELGA (tr|G1MQ83) Uncharacterized protein (Fragment) OS=M... 76 1e-11
B7QX41_9RHOB (tr|B7QX41) Pseudouridine synthase OS=Ruegeria sp. ... 75 2e-11
J1JEP4_9RHIZ (tr|J1JEP4) Pseudouridine synthase OS=Bartonella ra... 75 2e-11
Q1MG68_RHIL3 (tr|Q1MG68) Pseudouridine synthase OS=Rhizobium leg... 75 2e-11
D5QKZ5_METTR (tr|D5QKZ5) Pseudouridine synthase OS=Methylosinus ... 75 2e-11
E8RTG1_ASTEC (tr|E8RTG1) Pseudouridine synthase OS=Asticcacaulis... 75 2e-11
M2X6B1_GALSU (tr|M2X6B1) Ribosomal large subunit pseudouridine s... 75 2e-11
F8ES98_ZYMMT (tr|F8ES98) Pseudouridine synthase OS=Zymomonas mob... 75 2e-11
Q5NQE2_ZYMMO (tr|Q5NQE2) Pseudouridine synthase OS=Zymomonas mob... 75 2e-11
F8DT78_ZYMMA (tr|F8DT78) Pseudouridine synthase OS=Zymomonas mob... 75 2e-11
C8WCB9_ZYMMN (tr|C8WCB9) Pseudouridine synthase OS=Zymomonas mob... 75 2e-11
I6YQY2_ZYMMB (tr|I6YQY2) Pseudouridine synthase OS=Zymomonas mob... 75 2e-11
B7RL95_9RHOB (tr|B7RL95) Pseudouridine synthase OS=Roseobacter s... 75 2e-11
F2HQT0_BRUMM (tr|F2HQT0) Pseudouridine synthase OS=Brucella meli... 75 2e-11
F2GUX0_BRUM5 (tr|F2GUX0) Pseudouridine synthase OS=Brucella meli... 75 2e-11
G4PJD4_BRUML (tr|G4PJD4) Pseudouridine synthase OS=Brucella meli... 75 2e-11
C6AYR2_RHILS (tr|C6AYR2) Pseudouridine synthase OS=Rhizobium leg... 75 2e-11
A7HWU2_PARL1 (tr|A7HWU2) Pseudouridine synthase OS=Parvibaculum ... 75 2e-11
Q3J5P2_RHOS4 (tr|Q3J5P2) Pseudouridine synthase OS=Rhodobacter s... 75 2e-11
F5M4H2_RHOSH (tr|F5M4H2) Pseudouridine synthase OS=Rhodobacter s... 75 2e-11
B9KLC1_RHOSK (tr|B9KLC1) Pseudouridine synthase OS=Rhodobacter s... 75 2e-11
L1KA22_9RHOB (tr|L1KA22) Pseudouridine synthase OS=Rhodobacter s... 75 3e-11
Q8YH21_BRUME (tr|Q8YH21) Pseudouridine synthase OS=Brucella meli... 75 3e-11
C0G693_9RHIZ (tr|C0G693) Pseudouridine synthase OS=Brucella ceti... 75 3e-11
M5JSH3_9RHIZ (tr|M5JSH3) RluA family pseudouridine synthase OS=O... 75 3e-11
D0PCV9_BRUSS (tr|D0PCV9) Pseudouridine synthase OS=Brucella suis... 75 3e-11
C4WJL5_9RHIZ (tr|C4WJL5) Pseudouridine synthase OS=Ochrobactrum ... 75 3e-11
Q6I819_BRUSU (tr|Q6I819) Pseudouridine synthase OS=Brucella suis... 75 3e-11
N8IGZ2_BRUSS (tr|N8IGZ2) RluA family pseudouridine synthase OS=B... 75 3e-11
N8GMP8_BRUSS (tr|N8GMP8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7RKQ2_BRUSS (tr|N7RKQ2) RluA family pseudouridine synthase OS=B... 75 3e-11
N7PQW0_BRUSS (tr|N7PQW0) RluA family pseudouridine synthase OS=B... 75 3e-11
G8NEH8_BRUSS (tr|G8NEH8) Pseudouridine synthase OS=Brucella suis... 75 3e-11
A3PGP1_RHOS1 (tr|A3PGP1) Pseudouridine synthase OS=Rhodobacter s... 75 3e-11
G2IKM1_9SPHN (tr|G2IKM1) Pseudouridine synthase OS=Sphingobium s... 75 3e-11
E0DVT2_9RHIZ (tr|E0DVT2) Pseudouridine synthase OS=Brucella sp. ... 75 3e-11
E0DKJ8_9RHIZ (tr|E0DKJ8) Pseudouridine synthase OS=Brucella inop... 75 3e-11
D1CXW6_9RHIZ (tr|D1CXW6) Pseudouridine synthase OS=Brucella sp. ... 75 3e-11
N8AT52_BRUML (tr|N8AT52) RluA family pseudouridine synthase OS=B... 75 3e-11
G7Z9X3_AZOL4 (tr|G7Z9X3) Pseudouridine synthase OS=Azospirillum ... 75 3e-11
C9TVA3_BRUPB (tr|C9TVA3) Pseudouridine synthase OS=Brucella pinn... 75 3e-11
C7LBU6_BRUMC (tr|C7LBU6) Pseudouridine synthase OS=Brucella micr... 75 3e-11
C0RIX6_BRUMB (tr|C0RIX6) Pseudouridine synthase OS=Brucella meli... 75 3e-11
B0CGF1_BRUSI (tr|B0CGF1) Pseudouridine synthase OS=Brucella suis... 75 3e-11
N8PD03_BRUOV (tr|N8PD03) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8NPE9_BRUOV (tr|N8NPE9) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8NIG1_BRUOV (tr|N8NIG1) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8NE07_BRUOV (tr|N8NE07) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8MRK5_BRUOV (tr|N8MRK5) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8MPI7_BRUOV (tr|N8MPI7) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8M4U7_BRUOV (tr|N8M4U7) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8LIM8_BRUOV (tr|N8LIM8) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8L2T0_BRUOV (tr|N8L2T0) Uncharacterized protein OS=Brucella ovi... 75 3e-11
N8KWU8_BRUSS (tr|N8KWU8) RluA family pseudouridine synthase OS=B... 75 3e-11
N8KPS0_BRUSS (tr|N8KPS0) RluA family pseudouridine synthase OS=B... 75 3e-11
N8KC49_BRUML (tr|N8KC49) Uncharacterized protein OS=Brucella mel... 75 3e-11
N8K6Z8_BRUSS (tr|N8K6Z8) RluA family pseudouridine synthase OS=B... 75 3e-11
N8K6N1_BRUSS (tr|N8K6N1) RluA family pseudouridine synthase OS=B... 75 3e-11
N8JUX3_BRUML (tr|N8JUX3) Uncharacterized protein OS=Brucella mel... 75 3e-11
N8IS63_BRUSS (tr|N8IS63) RluA family pseudouridine synthase OS=B... 75 3e-11
N8HPX1_BRUSS (tr|N8HPX1) RluA family pseudouridine synthase OS=B... 75 3e-11
N8HCJ5_9RHIZ (tr|N8HCJ5) RluA family pseudouridine synthase OS=B... 75 3e-11
N8GZQ7_9RHIZ (tr|N8GZQ7) RluA family pseudouridine synthase OS=B... 75 3e-11
N8GCP1_9RHIZ (tr|N8GCP1) RluA family pseudouridine synthase OS=B... 75 3e-11
N8G5D9_9RHIZ (tr|N8G5D9) RluA family pseudouridine synthase OS=B... 75 3e-11
N8FN18_BRUOV (tr|N8FN18) RluA family pseudouridine synthase OS=B... 75 3e-11
N8FKH7_9RHIZ (tr|N8FKH7) RluA family pseudouridine synthase OS=B... 75 3e-11
N8F6J9_BRUOV (tr|N8F6J9) RluA family pseudouridine synthase OS=B... 75 3e-11
N8F4A3_9RHIZ (tr|N8F4A3) RluA family pseudouridine synthase OS=B... 75 3e-11
N8EPV9_BRUML (tr|N8EPV9) RluA family pseudouridine synthase OS=B... 75 3e-11
N8EFY3_9RHIZ (tr|N8EFY3) RluA family pseudouridine synthase OS=B... 75 3e-11
N8ECK9_BRUML (tr|N8ECK9) RluA family pseudouridine synthase OS=B... 75 3e-11
N8DPH3_BRUML (tr|N8DPH3) RluA family pseudouridine synthase OS=B... 75 3e-11
N8DHB8_BRUML (tr|N8DHB8) RluA family pseudouridine synthase OS=B... 75 3e-11
N8CYL9_BRUML (tr|N8CYL9) RluA family pseudouridine synthase OS=B... 75 3e-11
N8CS65_BRUML (tr|N8CS65) RluA family pseudouridine synthase OS=B... 75 3e-11
N8CQ73_BRUML (tr|N8CQ73) RluA family pseudouridine synthase OS=B... 75 3e-11
N8CF67_BRUML (tr|N8CF67) RluA family pseudouridine synthase OS=B... 75 3e-11
N8CDT1_BRUML (tr|N8CDT1) RluA family pseudouridine synthase OS=B... 75 3e-11
N8BX71_BRUML (tr|N8BX71) RluA family pseudouridine synthase OS=B... 75 3e-11
N8BGF0_BRUML (tr|N8BGF0) RluA family pseudouridine synthase OS=B... 75 3e-11
N8AIF7_BRUML (tr|N8AIF7) RluA family pseudouridine synthase OS=B... 75 3e-11
N7YXG9_BRUAO (tr|N7YXG9) RluA family pseudouridine synthase OS=B... 75 3e-11
N7YP12_BRUAO (tr|N7YP12) RluA family pseudouridine synthase OS=B... 75 3e-11
N7YLB6_BRUAO (tr|N7YLB6) RluA family pseudouridine synthase OS=B... 75 3e-11
N7YET8_BRUAO (tr|N7YET8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7XSU6_BRUAO (tr|N7XSU6) RluA family pseudouridine synthase OS=B... 75 3e-11
N7X4J1_BRUAO (tr|N7X4J1) RluA family pseudouridine synthase OS=B... 75 3e-11
N7X3H0_BRUAO (tr|N7X3H0) RluA family pseudouridine synthase OS=B... 75 3e-11
N7WGU7_BRUAO (tr|N7WGU7) RluA family pseudouridine synthase OS=B... 75 3e-11
N7WDE8_BRUAO (tr|N7WDE8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7WA13_BRUAO (tr|N7WA13) RluA family pseudouridine synthase OS=B... 75 3e-11
N7TQF3_BRUAO (tr|N7TQF3) RluA family pseudouridine synthase OS=B... 75 3e-11
N7SI10_BRUSS (tr|N7SI10) RluA family pseudouridine synthase OS=B... 75 3e-11
N7PY90_9RHIZ (tr|N7PY90) RluA family pseudouridine synthase OS=B... 75 3e-11
N7PUZ2_BRUSS (tr|N7PUZ2) RluA family pseudouridine synthase OS=B... 75 3e-11
N7PMV6_BRUOV (tr|N7PMV6) RluA family pseudouridine synthase OS=B... 75 3e-11
N7PBE0_9RHIZ (tr|N7PBE0) RluA family pseudouridine synthase OS=B... 75 3e-11
N7P0G7_BRUML (tr|N7P0G7) RluA family pseudouridine synthase OS=B... 75 3e-11
N7P079_BRUML (tr|N7P079) RluA family pseudouridine synthase OS=B... 75 3e-11
N7NPM8_BRUOV (tr|N7NPM8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7NAK9_BRUML (tr|N7NAK9) RluA family pseudouridine synthase OS=B... 75 3e-11
N7N9L8_BRUML (tr|N7N9L8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7N0Y5_BRUML (tr|N7N0Y5) RluA family pseudouridine synthase OS=B... 75 3e-11
N7M7H2_BRUML (tr|N7M7H2) RluA family pseudouridine synthase OS=B... 75 3e-11
N7LXI8_BRUML (tr|N7LXI8) RluA family pseudouridine synthase OS=B... 75 3e-11
N7LQ09_BRUML (tr|N7LQ09) RluA family pseudouridine synthase OS=B... 75 3e-11
N7LN92_BRUML (tr|N7LN92) RluA family pseudouridine synthase OS=B... 75 3e-11
N7LB51_BRUML (tr|N7LB51) RluA family pseudouridine synthase OS=B... 75 3e-11
N7L377_BRUML (tr|N7L377) RluA family pseudouridine synthase OS=B... 75 3e-11
N7L342_BRUML (tr|N7L342) RluA family pseudouridine synthase OS=B... 75 3e-11
N7KAK0_BRUML (tr|N7KAK0) RluA family pseudouridine synthase OS=B... 75 3e-11
N7G974_BRUAO (tr|N7G974) RluA family pseudouridine synthase OS=B... 75 3e-11
N7B1R9_BRUAO (tr|N7B1R9) RluA family pseudouridine synthase OS=B... 75 3e-11
N7ALE6_BRUAO (tr|N7ALE6) RluA family pseudouridine synthase OS=B... 75 3e-11
D1FFF5_9RHIZ (tr|D1FFF5) Pseudouridine synthase OS=Brucella ceti... 75 3e-11
D1F8P0_BRUML (tr|D1F8P0) Pseudouridine synthase OS=Brucella meli... 75 3e-11
D1EZ39_BRUML (tr|D1EZ39) Pseudouridine synthase OS=Brucella meli... 75 3e-11
D1ESB6_9RHIZ (tr|D1ESB6) Pseudouridine synthase OS=Brucella pinn... 75 3e-11
D0RHI8_9RHIZ (tr|D0RHI8) Pseudouridine synthase OS=Brucella sp. ... 75 3e-11
D0GFE0_BRUML (tr|D0GFE0) Pseudouridine synthase OS=Brucella meli... 75 3e-11
D0B341_BRUME (tr|D0B341) Pseudouridine synthase OS=Brucella meli... 75 3e-11
C9VJI3_9RHIZ (tr|C9VJI3) Pseudouridine synthase OS=Brucella ceti... 75 3e-11
C9UM16_BRUAO (tr|C9UM16) Pseudouridine synthase OS=Brucella abor... 75 3e-11
C9TLX1_9RHIZ (tr|C9TLX1) Pseudouridine synthase OS=Brucella pinn... 75 3e-11
C9TEL2_9RHIZ (tr|C9TEL2) Pseudouridine synthase OS=Brucella ceti... 75 3e-11
C9T682_9RHIZ (tr|C9T682) Pseudouridine synthase OS=Brucella ceti... 75 3e-11
A5VQE3_BRUO2 (tr|A5VQE3) Pseudouridine synthase OS=Brucella ovis... 75 3e-11
J0Z9Y0_BAREL (tr|J0Z9Y0) Pseudouridine synthase OS=Bartonella el... 75 3e-11
J0RH28_BAREL (tr|J0RH28) Pseudouridine synthase OS=Bartonella el... 75 3e-11
N7S430_BRUSS (tr|N7S430) RluA family pseudouridine synthase OS=B... 75 3e-11
N7RWD2_BRUSS (tr|N7RWD2) RluA family pseudouridine synthase OS=B... 75 3e-11
G4RC09_PELHB (tr|G4RC09) Pseudouridine synthase OS=Pelagibacteri... 75 3e-11
R6ISM3_9PROT (tr|R6ISM3) Pseudouridine synthase OS=Azospirillum ... 75 3e-11
F2ABP2_RHIET (tr|F2ABP2) Pseudouridine synthase OS=Rhizobium etl... 75 3e-11
E2PJT2_9RHIZ (tr|E2PJT2) Pseudouridine synthase OS=Brucella sp. ... 75 3e-11
J0YWJ1_9RHIZ (tr|J0YWJ1) Pseudouridine synthase OS=Bartonella sp... 75 3e-11
J0VKL5_RHILT (tr|J0VKL5) Pseudouridine synthase OS=Rhizobium leg... 75 3e-11
J0C8S3_RHILT (tr|J0C8S3) Pseudouridine synthase OS=Rhizobium leg... 75 3e-11
J0RJ91_BARTA (tr|J0RJ91) Pseudouridine synthase OS=Bartonella ta... 75 3e-11
J0JQP2_RHILV (tr|J0JQP2) Pseudouridine synthase OS=Rhizobium leg... 74 4e-11
A9W6A7_METEP (tr|A9W6A7) Pseudouridine synthase OS=Methylobacter... 74 4e-11
J1JQ08_9RHIZ (tr|J1JQ08) Pseudouridine synthase OS=Bartonella wa... 74 4e-11
G8T239_BRUAO (tr|G8T239) Pseudouridine synthase OS=Brucella abor... 74 4e-11
D7H3E7_BRUAO (tr|D7H3E7) Pseudouridine synthase OS=Brucella abor... 74 4e-11
C9VSP3_BRUAO (tr|C9VSP3) Pseudouridine synthase OS=Brucella abor... 74 4e-11
C9UY17_BRUAO (tr|C9UY17) Pseudouridine synthase OS=Brucella abor... 74 4e-11
C9UCT8_BRUAO (tr|C9UCT8) Pseudouridine synthase OS=Brucella abor... 74 4e-11
C9U3L5_BRUAO (tr|C9U3L5) Pseudouridine synthase OS=Brucella abor... 74 4e-11
J0PW39_9RHIZ (tr|J0PW39) Pseudouridine synthase OS=Bartonella bi... 74 4e-11
C4IQR9_BRUAO (tr|C4IQR9) Pseudouridine synthase OS=Brucella abor... 74 4e-11
Q57DC9_BRUAB (tr|Q57DC9) Pseudouridine synthase OS=Brucella abor... 74 4e-11
Q2YQ71_BRUA2 (tr|Q2YQ71) Pseudouridine synthase OS=Brucella abor... 74 4e-11
B2S5L2_BRUA1 (tr|B2S5L2) Pseudouridine synthase OS=Brucella abor... 74 4e-11
R8WB50_BRUAO (tr|R8WB50) RluA family pseudouridine synthase OS=B... 74 4e-11
R8W283_BRUAO (tr|R8W283) RluA family pseudouridine synthase OS=B... 74 4e-11
N8LFS6_BRUAO (tr|N8LFS6) RluA family pseudouridine synthase OS=B... 74 4e-11
N8AJ16_BRUAO (tr|N8AJ16) RluA family pseudouridine synthase OS=B... 74 4e-11
N7ZUR3_BRUAO (tr|N7ZUR3) RluA family pseudouridine synthase OS=B... 74 4e-11
N7ZFC4_BRUAO (tr|N7ZFC4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7YYB1_BRUAO (tr|N7YYB1) RluA family pseudouridine synthase OS=B... 74 4e-11
N7YSH7_BRUAO (tr|N7YSH7) RluA family pseudouridine synthase OS=B... 74 4e-11
N7Y3H6_BRUAO (tr|N7Y3H6) RluA family pseudouridine synthase OS=B... 74 4e-11
N7Y1S2_BRUAO (tr|N7Y1S2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7XTS0_BRUAO (tr|N7XTS0) RluA family pseudouridine synthase OS=B... 74 4e-11
N7XP74_BRUAO (tr|N7XP74) RluA family pseudouridine synthase OS=B... 74 4e-11
N7VXB2_BRUAO (tr|N7VXB2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7VXB0_BRUAO (tr|N7VXB0) RluA family pseudouridine synthase OS=B... 74 4e-11
N7V4L5_BRUAO (tr|N7V4L5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7UXZ9_BRUAO (tr|N7UXZ9) RluA family pseudouridine synthase OS=B... 74 4e-11
N7UXC5_BRUAO (tr|N7UXC5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7UIT5_BRUAO (tr|N7UIT5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7UAW4_BRUAO (tr|N7UAW4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7U3L4_BRUAO (tr|N7U3L4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7U0B2_BRUAO (tr|N7U0B2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7TMS5_BRUAO (tr|N7TMS5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7TD83_BRUAO (tr|N7TD83) RluA family pseudouridine synthase OS=B... 74 4e-11
N7T007_BRUAO (tr|N7T007) RluA family pseudouridine synthase OS=B... 74 4e-11
N7SIA2_BRUAO (tr|N7SIA2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7RPW2_BRUAO (tr|N7RPW2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7K265_BRUAO (tr|N7K265) RluA family pseudouridine synthase OS=B... 74 4e-11
N7JU63_BRUAO (tr|N7JU63) RluA family pseudouridine synthase OS=B... 74 4e-11
N7JIG2_BRUAO (tr|N7JIG2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7JAK6_BRUAO (tr|N7JAK6) RluA family pseudouridine synthase OS=B... 74 4e-11
N7J266_BRUAO (tr|N7J266) RluA family pseudouridine synthase OS=B... 74 4e-11
N7ITY8_BRUAO (tr|N7ITY8) RluA family pseudouridine synthase OS=B... 74 4e-11
N7II36_BRUAO (tr|N7II36) RluA family pseudouridine synthase OS=B... 74 4e-11
N7I1B9_BRUAO (tr|N7I1B9) RluA family pseudouridine synthase OS=B... 74 4e-11
N7HSC2_BRUAO (tr|N7HSC2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7HN53_BRUAO (tr|N7HN53) RluA family pseudouridine synthase OS=B... 74 4e-11
N7HAV5_BRUAO (tr|N7HAV5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7H8Z2_BRUAO (tr|N7H8Z2) RluA family pseudouridine synthase OS=B... 74 4e-11
N7H226_BRUAO (tr|N7H226) RluA family pseudouridine synthase OS=B... 74 4e-11
N7H0Q0_BRUAO (tr|N7H0Q0) RluA family pseudouridine synthase OS=B... 74 4e-11
N7GML3_BRUAO (tr|N7GML3) RluA family pseudouridine synthase OS=B... 74 4e-11
N7GI30_BRUAO (tr|N7GI30) RluA family pseudouridine synthase OS=B... 74 4e-11
N7FX52_BRUAO (tr|N7FX52) RluA family pseudouridine synthase OS=B... 74 4e-11
N7FRR7_BRUAO (tr|N7FRR7) RluA family pseudouridine synthase OS=B... 74 4e-11
N7FQQ1_BRUAO (tr|N7FQQ1) RluA family pseudouridine synthase OS=B... 74 4e-11
N7F6J4_BRUAO (tr|N7F6J4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7EIE3_BRUAO (tr|N7EIE3) RluA family pseudouridine synthase OS=B... 74 4e-11
N7E9A0_BRUAO (tr|N7E9A0) RluA family pseudouridine synthase OS=B... 74 4e-11
N7E3Z3_BRUAO (tr|N7E3Z3) RluA family pseudouridine synthase OS=B... 74 4e-11
N7DWZ6_BRUAO (tr|N7DWZ6) RluA family pseudouridine synthase OS=B... 74 4e-11
N7DTS9_BRUAO (tr|N7DTS9) RluA family pseudouridine synthase OS=B... 74 4e-11
N7DD05_BRUAO (tr|N7DD05) RluA family pseudouridine synthase OS=B... 74 4e-11
N7D2M3_BRUAO (tr|N7D2M3) RluA family pseudouridine synthase OS=B... 74 4e-11
N7D0I7_BRUAO (tr|N7D0I7) RluA family pseudouridine synthase OS=B... 74 4e-11
N7CJZ1_BRUAO (tr|N7CJZ1) RluA family pseudouridine synthase OS=B... 74 4e-11
N7CEZ5_BRUAO (tr|N7CEZ5) RluA family pseudouridine synthase OS=B... 74 4e-11
N7CDM4_BRUAO (tr|N7CDM4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7BZI7_BRUAO (tr|N7BZI7) RluA family pseudouridine synthase OS=B... 74 4e-11
N7BST6_BRUAO (tr|N7BST6) RluA family pseudouridine synthase OS=B... 74 4e-11
N7BN62_BRUAO (tr|N7BN62) RluA family pseudouridine synthase OS=B... 74 4e-11
N7B2A4_BRUAO (tr|N7B2A4) RluA family pseudouridine synthase OS=B... 74 4e-11
N7AE85_BRUAO (tr|N7AE85) RluA family pseudouridine synthase OS=B... 74 4e-11
N7A8V5_BRUAO (tr|N7A8V5) RluA family pseudouridine synthase OS=B... 74 4e-11
N6ZMF9_BRUAO (tr|N6ZMF9) RluA family pseudouridine synthase OS=B... 74 4e-11
H3R193_BRUAO (tr|H3R193) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3QRX6_BRUAO (tr|H3QRX6) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3QJX7_BRUAO (tr|H3QJX7) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3QAZ9_BRUAO (tr|H3QAZ9) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3Q3G9_BRUAO (tr|H3Q3G9) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3PR53_BRUAO (tr|H3PR53) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3PJ53_BRUAO (tr|H3PJ53) Pseudouridine synthase OS=Brucella abor... 74 4e-11
H3P893_BRUAO (tr|H3P893) Pseudouridine synthase OS=Brucella abor... 74 4e-11
D0AW61_BRUAO (tr|D0AW61) Pseudouridine synthase OS=Brucella abor... 74 4e-11
L0LMG9_RHITR (tr|L0LMG9) Pseudouridine synthase OS=Rhizobium tro... 74 4e-11
N8JT46_BRUSS (tr|N8JT46) RluA family pseudouridine synthase OS=B... 74 4e-11
N8JKM7_BRUSS (tr|N8JKM7) RluA family pseudouridine synthase OS=B... 74 4e-11
N8IFS3_BRUSS (tr|N8IFS3) RluA family pseudouridine synthase OS=B... 74 4e-11
N8HUI6_BRUSS (tr|N8HUI6) RluA family pseudouridine synthase OS=B... 74 4e-11
N7RGV0_BRUSS (tr|N7RGV0) RluA family pseudouridine synthase OS=B... 74 4e-11
A4TV08_9PROT (tr|A4TV08) Pseudouridine synthase OS=Magnetospiril... 74 4e-11
J0PWS1_9RHIZ (tr|J0PWS1) Pseudouridine synthase OS=Bartonella wa... 74 4e-11
G8AZQ9_AZOBR (tr|G8AZQ9) Pseudouridine synthase OS=Azospirillum ... 74 5e-11
G8PPD8_PSEUV (tr|G8PPD8) Pseudouridine synthase OS=Pseudovibrio ... 74 5e-11
E3TG33_ICTPU (tr|E3TG33) RNA pseudouridylate synthase domain-con... 74 5e-11
A4WVH9_RHOS5 (tr|A4WVH9) Pseudouridine synthase OS=Rhodobacter s... 74 5e-11
K9CV77_SPHYA (tr|K9CV77) Pseudouridine synthase OS=Sphingobium y... 74 5e-11
J2INJ7_9RHIZ (tr|J2INJ7) Pseudouridine synthase OS=Rhizobium sp.... 74 5e-11
B3PP13_RHIE6 (tr|B3PP13) Pseudouridine synthase OS=Rhizobium etl... 74 5e-11
M4S031_9SPHN (tr|M4S031) Ribosomal large subunit pseudouridine s... 74 6e-11
I9N9T6_RHILT (tr|I9N9T6) Pseudouridine synthase OS=Rhizobium leg... 74 6e-11
C1MYF0_MICPC (tr|C1MYF0) Predicted protein OS=Micromonas pusilla... 74 6e-11
G3W2E2_SARHA (tr|G3W2E2) Uncharacterized protein (Fragment) OS=S... 74 6e-11
J2KV74_9RHIZ (tr|J2KV74) Pseudouridine synthase OS=Rhizobium sp.... 74 6e-11
F6UR33_MONDO (tr|F6UR33) Uncharacterized protein OS=Monodelphis ... 74 7e-11
D3P0W8_AZOS1 (tr|D3P0W8) Pseudouridine synthase OS=Azospirillum ... 74 7e-11
N6UUG3_9RHIZ (tr|N6UUG3) Ribosomal large subunit pseudouridine s... 74 7e-11
A6FLR0_9RHOB (tr|A6FLR0) Pseudouridine synthase OS=Roseobacter s... 74 7e-11
N9VZD3_9SPHN (tr|N9VZD3) Pseudouridine synthase RluD OS=Sphingop... 74 7e-11
H3J6Q1_STRPU (tr|H3J6Q1) Uncharacterized protein OS=Strongylocen... 74 7e-11
A9IVY6_BART1 (tr|A9IVY6) Pseudouridine synthase OS=Bartonella tr... 73 7e-11
M3JQN1_9RHIZ (tr|M3JQN1) Pseudouridine synthase OS=Ochrobactrum ... 73 8e-11
Q11HT2_MESSB (tr|Q11HT2) Pseudouridine synthase OS=Mesorhizobium... 73 8e-11
N8M166_BRUOV (tr|N8M166) Uncharacterized protein OS=Brucella ovi... 73 9e-11
J1KJ14_BARVI (tr|J1KJ14) Pseudouridine synthase OS=Bartonella vi... 73 9e-11
Q1NAE1_9SPHN (tr|Q1NAE1) Pseudouridine synthase (Fragment) OS=Sp... 73 9e-11
K0W3Q9_9RHIZ (tr|K0W3Q9) Pseudouridine synthase OS=Rhizobium sp.... 73 9e-11
J0R5B3_BARVI (tr|J0R5B3) Pseudouridine synthase OS=Bartonella vi... 73 9e-11
A7MCP8_DANRE (tr|A7MCP8) Zgc:92006 protein OS=Danio rerio GN=rpu... 73 9e-11
B9JFK3_AGRRK (tr|B9JFK3) Pseudouridine synthase OS=Agrobacterium... 73 9e-11
J2WGA5_9RHIZ (tr|J2WGA5) Pseudouridine synthase OS=Rhizobium sp.... 73 9e-11
M1NYV8_BARAA (tr|M1NYV8) Pseudouridine synthase OS=Bartonella au... 73 1e-10
J2L5B4_9SPHN (tr|J2L5B4) Pseudouridine synthase (Precursor) OS=S... 73 1e-10
C9VAF8_BRUNE (tr|C9VAF8) Pseudouridine synthase OS=Brucella neot... 73 1e-10
D4Z192_SPHJU (tr|D4Z192) Pseudouridine synthase OS=Sphingobium j... 73 1e-10
K2K403_9PROT (tr|K2K403) Pseudouridine synthase OS=Oceanibaculum... 73 1e-10
B6R0Y5_9RHOB (tr|B6R0Y5) Pseudouridine synthase OS=Pseudovibrio ... 73 1e-10
D5RQH5_9PROT (tr|D5RQH5) Pseudouridine synthase OS=Roseomonas ce... 73 1e-10
B5ZQP1_RHILW (tr|B5ZQP1) Pseudouridine synthase OS=Rhizobium leg... 73 1e-10
N6VF94_9RHIZ (tr|N6VF94) Ribosomal large subunit pseudouridine s... 73 1e-10
I9N768_RHILT (tr|I9N768) Pseudouridine synthase OS=Rhizobium leg... 73 1e-10
B1LYA0_METRJ (tr|B1LYA0) Pseudouridine synthase OS=Methylobacter... 73 1e-10
I5B9D0_9SPHN (tr|I5B9D0) Pseudouridine synthase OS=Sphingobium i... 73 1e-10
J0R821_9RHIZ (tr|J0R821) Pseudouridine synthase OS=Bartonella ta... 73 1e-10
J0R0D5_9RHIZ (tr|J0R0D5) Pseudouridine synthase OS=Bartonella ta... 73 1e-10
B6IU85_RHOCS (tr|B6IU85) Pseudouridine synthase OS=Rhodospirillu... 73 1e-10
E3TCG9_9TELE (tr|E3TCG9) RNA pseudouridylate synthase domain-con... 73 1e-10
J2VX92_9RHIZ (tr|J2VX92) Pseudouridine synthase OS=Phyllobacteri... 73 1e-10
A6X0P5_OCHA4 (tr|A6X0P5) Pseudouridine synthase OS=Ochrobactrum ... 72 1e-10
Q0BW04_GRABC (tr|Q0BW04) Pseudouridine synthase OS=Granulibacter... 72 1e-10
M1P8A1_BARVW (tr|M1P8A1) Pseudouridine synthase OS=Bartonella vi... 72 1e-10
N6VPH6_BARVB (tr|N6VPH6) Ribosomal large subunit pseudouridine s... 72 1e-10
K7G6V4_PELSI (tr|K7G6V4) Uncharacterized protein (Fragment) OS=P... 72 1e-10
A4S8Z7_OSTLU (tr|A4S8Z7) Predicted protein OS=Ostreococcus lucim... 72 1e-10
H0RP78_9BRAD (tr|H0RP78) Pseudouridine synthase OS=Bradyrhizobiu... 72 1e-10
H0SIR2_9BRAD (tr|H0SIR2) Pseudouridine synthase OS=Bradyrhizobiu... 72 1e-10
H1KGR8_METEX (tr|H1KGR8) Pseudouridine synthase OS=Methylobacter... 72 2e-10
J1JAK4_BARDO (tr|J1JAK4) Pseudouridine synthase OS=Bartonella do... 72 2e-10
Q0FAA8_9RHOB (tr|Q0FAA8) Pseudouridine synthase OS=Rhodobacteral... 72 2e-10
E6YW06_9RHIZ (tr|E6YW06) Pseudouridine synthase OS=Bartonella sp... 72 2e-10
R7DSM8_9FIRM (tr|R7DSM8) Pseudouridine synthase OS=Coprobacillus... 72 2e-10
C5AUR1_METEA (tr|C5AUR1) Pseudouridine synthase OS=Methylobacter... 72 2e-10
F6EVJ0_SPHCR (tr|F6EVJ0) Pseudouridine synthase OS=Sphingobium c... 72 2e-10
A4YWT8_BRASO (tr|A4YWT8) Pseudouridine synthase OS=Bradyrhizobiu... 72 2e-10
Q5FSR8_GLUOX (tr|Q5FSR8) Pseudouridine synthase OS=Gluconobacter... 72 2e-10
Q92QE2_RHIME (tr|Q92QE2) Pseudouridine synthase OS=Rhizobium mel... 72 2e-10
F7X279_SINMM (tr|F7X279) Pseudouridine synthase OS=Sinorhizobium... 72 2e-10
F6DXF2_SINMK (tr|F6DXF2) Pseudouridine synthase OS=Sinorhizobium... 72 2e-10
F6BVU8_SINMB (tr|F6BVU8) Pseudouridine synthase OS=Sinorhizobium... 72 2e-10
M4N0A3_RHIML (tr|M4N0A3) Putative ribosomal large subunit pseudo... 72 2e-10
M4IA60_RHIML (tr|M4IA60) Pseudouridine synthase, RluA family OS=... 72 2e-10
K0PAA9_RHIML (tr|K0PAA9) Pseudouridine synthase OS=Sinorhizobium... 72 2e-10
H0GB97_RHIML (tr|H0GB97) Pseudouridine synthase OS=Sinorhizobium... 72 2e-10
A3JXI7_9RHOB (tr|A3JXI7) Pseudouridine synthase OS=Sagittula ste... 72 2e-10
Q4RXL3_TETNG (tr|Q4RXL3) Chromosome 11 SCAF14979, whole genome s... 72 2e-10
H0T8P0_9BRAD (tr|H0T8P0) Pseudouridine synthase OS=Bradyrhizobiu... 72 2e-10
B6AVG3_9RHOB (tr|B6AVG3) Pseudouridine synthase OS=Rhodobacterac... 72 2e-10
M4AR63_XIPMA (tr|M4AR63) Uncharacterized protein OS=Xiphophorus ... 72 2e-10
H2U2F5_TAKRU (tr|H2U2F5) Uncharacterized protein (Fragment) OS=T... 72 2e-10
A5ELJ1_BRASB (tr|A5ELJ1) Pseudouridine synthase OS=Bradyrhizobiu... 72 2e-10
K0PPF8_9RHIZ (tr|K0PPF8) Pseudouridine synthase OS=Rhizobium mes... 72 2e-10
H0YR85_TAEGU (tr|H0YR85) Uncharacterized protein (Fragment) OS=T... 72 3e-10
Q2K820_RHIEC (tr|Q2K820) Pseudouridine synthase OS=Rhizobium etl... 72 3e-10
E3I8F8_RHOVT (tr|E3I8F8) Pseudouridine synthase, RluA family OS=... 72 3e-10
A4U0J7_9PROT (tr|A4U0J7) Pseudouridine synthase OS=Magnetospiril... 72 3e-10
A3X427_9RHOB (tr|A3X427) Pseudouridine synthase OS=Roseobacter s... 72 3e-10
M8A495_RHIRD (tr|M8A495) Ribosomal large subunit pseudouridine s... 71 3e-10
E6YRL1_9RHIZ (tr|E6YRL1) Pseudouridine synthase OS=Bartonella sp... 71 3e-10
L1QJR9_BREDI (tr|L1QJR9) Pseudouridine synthase OS=Brevundimonas... 71 3e-10
H2LBZ9_ORYLA (tr|H2LBZ9) Uncharacterized protein OS=Oryzias lati... 71 4e-10
>K7MNI8_SOYBN (tr|K7MNI8) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 476
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 200/210 (95%)
Query: 57 WNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVT 116
WN+ACEATYQRYWALVIGTP EKEGIIHAPLSKVLLNDGKTER++LAHHS++EPRQEAVT
Sbjct: 267 WNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVT 326
Query: 117 EYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVD 176
EYRVLGP+INGCSWVELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD
Sbjct: 327 EYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVD 386
Query: 177 IEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPS 236
IEPTTGKPY++RRPEGL+VQKGSVLSKVPLLHLHCREL LPNI KF+HV S EEL S
Sbjct: 387 IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTS 446
Query: 237 LREQPDVLRFVATMPSHMRISWNLMSSYLV 266
LREQPDVLRFVATMPSHMRISWNLMSSYLV
Sbjct: 447 LREQPDVLRFVATMPSHMRISWNLMSSYLV 476
>B9SLG9_RICCO (tr|B9SLG9) Ribosomal pseudouridine synthase, putative OS=Ricinus
communis GN=RCOM_0686660 PE=4 SV=1
Length = 468
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 191/211 (90%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AWNDAC+ATYQRYWALVIG+P EKEG+I APLSKVLLNDGKTERV+LA HS +E QEA+
Sbjct: 258 AWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEAL 317
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
TEYRVLGP+INGCSW+ELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW VH RWKQMPRV
Sbjct: 318 TEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRV 377
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHP 235
DIEP +GKPY++RRP GL+VQKGSVLSKVPLLHLHCRE LPNI+KFL V + E +HP
Sbjct: 378 DIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIHP 437
Query: 236 SLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+L +PD+LRFVA+MP+HM+ISWNLMSSYLV
Sbjct: 438 ALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468
>M5WPG3_PRUPE (tr|M5WPG3) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa005240mg PE=4 SV=1
Length = 471
Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 191/211 (90%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AW+DACEA YQRYWALVIG+P EKEG+I APLSKVLL++GKTERV+LAH S +E Q+A+
Sbjct: 261 AWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAI 320
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
T+YRVLGP INGCSW+ELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMP V
Sbjct: 321 TQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHV 380
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHP 235
D+EPT+G PY++RRP GL+VQKGSVLSKVPLLHLHCREL LPNI+KFL + ++ + LHP
Sbjct: 381 DVEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLHP 440
Query: 236 SLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
++ +PD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 441 AVSSKPDILRFVASMPSHMKISWNLMSSYLV 471
>D7SS16_VITVI (tr|D7SS16) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_09s0054g00780 PE=4 SV=1
Length = 481
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/213 (78%), Positives = 191/213 (89%), Gaps = 2/213 (0%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AW+DACEAT QRYWALVIG+P +KEG+IHAPLSKVLL+DGKTERV+LA+ S +E QEA+
Sbjct: 269 AWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAI 328
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
TEYRVLGP INGCSW+EL P TSRKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRV
Sbjct: 329 TEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRV 388
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSP--EEL 233
D+EPTTGKPY+MRRPEGL+VQKGSVLSKVPLLHLHCREL LPNI+KFL + + P +
Sbjct: 389 DLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQ 448
Query: 234 HPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+P L +PD+LRFVA+MP+HM+ISWNLMSSYLV
Sbjct: 449 YPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481
>R0HTT9_9BRAS (tr|R0HTT9) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022381mg PE=4 SV=1
Length = 478
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/236 (72%), Positives = 201/236 (85%), Gaps = 5/236 (2%)
Query: 34 EQKIAYL--IFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVL 91
++ I YL +F+ Y ++ AWN +CEA YQ+YWALVIG+P EKEG+I APLSKVL
Sbjct: 245 KESIGYLHSVFSDYKGRNSSCK--AWNKSCEAMYQQYWALVIGSPKEKEGLISAPLSKVL 302
Query: 92 LNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEAL 151
L+DGKT+RV+LA S E QEA+TEYRVLGP INGCSW+ELRP+TSRKHQLRVHCAEAL
Sbjct: 303 LDDGKTDRVVLAQGSCFEASQEAITEYRVLGPMINGCSWLELRPITSRKHQLRVHCAEAL 362
Query: 152 GTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHC 211
GTPIVGDYKYGWFVH RWKQMP+VDIEPTTGKPY++RRPEGL+VQKGSVLSKVPLLHLHC
Sbjct: 363 GTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHC 422
Query: 212 RELALPNISKFLHVF-EKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
RE+ LPNI+KFLHV ++ E + + ++PD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 423 REMVLPNIAKFLHVLNQQEAEPIRTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478
>M4F1X8_BRARP (tr|M4F1X8) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra035075 PE=3 SV=1
Length = 471
Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 162/212 (76%), Positives = 190/212 (89%), Gaps = 1/212 (0%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AWN ACEA YQRYWALVIG+P +KEGI+ APLSKVLL+DGKT+RV+LA S + QEA+
Sbjct: 260 AWNKACEAMYQRYWALVIGSPKDKEGIVSAPLSKVLLDDGKTDRVVLAQGSGFKTSQEAI 319
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
T+YRVLGP INGCSW+ELRP+TSRKHQLRVHCAEALGTPIVGDYKYGWF+H RWKQMP+V
Sbjct: 320 TKYRVLGPMINGCSWLELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFIHKRWKQMPQV 379
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVF-EKSPEELH 234
DIEPTTGK Y++RRPEGL++QKGSVLSKVPLLHLHCRE+ LPNI+KFLHV ++ + LH
Sbjct: 380 DIEPTTGKQYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLSQREADPLH 439
Query: 235 PSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
P + +PD+LRFVA+MPSHM+ISWN+MSSYLV
Sbjct: 440 PGISSKPDLLRFVASMPSHMKISWNIMSSYLV 471
>D7KVW3_ARALL (tr|D7KVW3) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_477057 PE=3 SV=1
Length = 477
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/212 (78%), Positives = 189/212 (89%), Gaps = 1/212 (0%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AWN ACEA YQ+YWALVIG+P EKEG+I APLSKVLL+DGKT+RV+LA S E QEA+
Sbjct: 266 AWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQEAI 325
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
TEYRVLGP INGCSW+ELRP+TSRKHQLRVHCAEALGT IVGDYKYGWFVH RWKQMP+V
Sbjct: 326 TEYRVLGPMINGCSWLELRPITSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQV 385
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVF-EKSPEELH 234
DIEPTTGKPY++RRPEGL+VQKGSVLSKVPLLHLHCRE+ LPNI+KFLHV ++ E L
Sbjct: 386 DIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQETEPLR 445
Query: 235 PSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ ++PD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 446 TGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 477
>M1B239_SOLTU (tr|M1B239) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400013566 PE=4 SV=1
Length = 475
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/223 (72%), Positives = 190/223 (85%), Gaps = 2/223 (0%)
Query: 45 YSVTLTAQNLL-AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLA 103
+S T +++L AWNDAC +TYQRYWALVIG+P EKEG+I APL+KVLL+DG+TERVMLA
Sbjct: 254 FSNTKKSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDDGRTERVMLA 313
Query: 104 HHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
S +E EAVTEYR+LGP INGCSW+ELRP TSRKHQ+RVHCAEALGTPIVGDYKYGW
Sbjct: 314 QQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDYKYGW 373
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
FVH +WKQMPRVD+EPTTGKPYR++RPEGL+VQKGSVLSKVPLLHLHCREL LPNI+KF+
Sbjct: 374 FVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFI 433
Query: 224 HVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + ++ H +PD+LRFVA MPS M+ISW LMSS L+
Sbjct: 434 ELHSRKTKK-HSDYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 475
>M0T0M2_MUSAM (tr|M0T0M2) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 480
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 185/221 (83%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
+V L + WN+ACEAT QRYWALVIG+P E+EGII APL+KVLLN+GK ER++LAH
Sbjct: 260 NVNLAKSSSEIWNNACEATTQRYWALVIGSPKEREGIISAPLTKVLLNNGKAERIILAHP 319
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ Q+A+TEYRV+GP INGCSWVELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 320 SGIDGSQDAITEYRVMGPTINGCSWVELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 379
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQMPRVD E +GKPY++RRPEGL+VQKGSVLSKVPLLHLHCRE+ +PNISKFL
Sbjct: 380 HQRWKQMPRVDYETLSGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVIPNISKFLGS 439
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ E +P +PD+LR VA MPSHM+ISWN+MSS+LV
Sbjct: 440 SGEWLVECNPGSTSKPDLLRIVAPMPSHMKISWNVMSSFLV 480
>A3BUX1_ORYSJ (tr|A3BUX1) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_27960 PE=2 SV=1
Length = 509
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 183/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L N WN ACEA QRYWALVIGTP E+EGII APLSKVLL+DGK ERV+LAH
Sbjct: 289 SVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHP 348
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVT YRV+GP I+GCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 349 SGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 408
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 409 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 468
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ E P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 469 NGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 509
>I1QK84_ORYGL (tr|I1QK84) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 477
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 183/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L N WN ACEA QRYWALVIGTP E+EGII APLSKVLL+DGK ERV+LAH
Sbjct: 257 SVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHP 316
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVT YRV+GP I+GCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 317 SGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 376
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 377 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 436
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ E P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 437 NGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 477
>A2YX47_ORYSI (tr|A2YX47) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_29911 PE=2 SV=1
Length = 475
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 183/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L N WN ACEA QRYWALVIGTP E+EGII APLSKVLL+DGK ERV+LAH
Sbjct: 255 SVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHP 314
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVT YRV+GP I+GCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 315 SGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 374
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 375 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 434
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ E P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 435 NGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 475
>K4CED5_SOLLC (tr|K4CED5) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc07g042750.2 PE=4 SV=1
Length = 475
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 180/211 (85%), Gaps = 1/211 (0%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
AWNDAC +TYQRYWALVIG+P KEG+I APL+KVLL+DG+TERVMLA S +E EAV
Sbjct: 266 AWNDACGSTYQRYWALVIGSPKVKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAV 325
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRV 175
TEYR+LGP INGCSW+ELRP TSRKHQLRVHCAEALGTPIVGDYKYGWFVH +WKQMPRV
Sbjct: 326 TEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRV 385
Query: 176 DIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHP 235
D+EP TGKPYR++RPEGL+VQKGSVLSKVPLLHLHCREL LPNI+KF+ + + + +
Sbjct: 386 DVEPITGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTRK-NT 444
Query: 236 SLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+PD+LRFVA MPS M+ISW LMSS L+
Sbjct: 445 DYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 475
>J3MUH2_ORYBR (tr|J3MUH2) Uncharacterized protein OS=Oryza brachyantha
GN=OB08G27530 PE=4 SV=1
Length = 340
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 182/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L N AWN ACEA QRYWALVIGTP E EGII APLSKVLL+DGK ERV+LAH
Sbjct: 120 SVNLAKTNSEAWNAACEAYMQRYWALVIGTPKESEGIISAPLSKVLLDDGKAERVILAHP 179
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVT YRV+GP I+GCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 180 SGIDGAQEAVTAYRVMGPTISGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 239
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGL +QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 240 HQRWKQNPQPDFEPFTGEPYKLRRPEGLAIQKGSVLSKVPLLHLHCREMVIPNIAKFLSN 299
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ E P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 300 TGEWHENGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 340
>M0ZA50_HORVD (tr|M0ZA50) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 353
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 182/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
S+ L WN ACE+ QRYWALVIGTP E EG+I APL+KVLL+DGK ERV+LAH
Sbjct: 133 SIKLAKTASQTWNTACESYLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHP 192
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVTEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 193 SGIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 252
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 253 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN 312
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 313 TGEWHDNGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 353
>M0ZA48_HORVD (tr|M0ZA48) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 340
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 182/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
S+ L WN ACE+ QRYWALVIGTP E EG+I APL+KVLL+DGK ERV+LAH
Sbjct: 120 SIKLAKTASQTWNTACESYLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHP 179
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVTEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 180 SGIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 239
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 240 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN 299
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 300 TGEWHDNGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 340
>F2D071_HORVD (tr|F2D071) Predicted protein (Fragment) OS=Hordeum vulgare var.
distichum PE=2 SV=1
Length = 357
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 182/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
S+ L WN ACE+ QRYWALVIGTP E EG+I APL+KVLL+DGK ERV+LAH
Sbjct: 137 SIKLAKTASQTWNTACESYLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHP 196
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVTEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 197 SGIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 256
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 257 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN 316
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 317 TGEWHDNGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 357
>M0ZA54_HORVD (tr|M0ZA54) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 237
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 182/221 (82%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
S+ L WN ACE+ QRYWALVIGTP E EG+I APL+KVLL+DGK ERV+LAH
Sbjct: 17 SIKLAKTASQTWNTACESYLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHP 76
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEAVTEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 77 SGIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 136
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 137 HQRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSN 196
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 197 TGEWHDNGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 237
>K3YHF2_SETIT (tr|K3YHF2) Uncharacterized protein OS=Setaria italica
GN=Si013670m.g PE=4 SV=1
Length = 478
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 181/221 (81%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L WN ACEA Q+YWALVIGTP E+EG+I AP+SKVLL+DGK ERV+LAH
Sbjct: 258 SVNLARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHP 317
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEA+TEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 318 SGIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 377
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ LPNI+KFL
Sbjct: 378 HQRWKQNPQPDFEPFTGEPYKIRRPEGLEVQKGSVLSKVPLLHLHCREMVLPNIAKFLSS 437
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ + +E+P++LRF+A MP HM+ISWN+MSSYLV
Sbjct: 438 IGEWHDGGAAWAKEKPNLLRFIAPMPPHMKISWNVMSSYLV 478
>K7UC97_MAIZE (tr|K7UC97) Uncharacterized protein OS=Zea mays GN=ZEAMMB73_778378
PE=4 SV=1
Length = 340
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 181/221 (81%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L + WN ACEA Q+YWALVIGTP E+EG+I AP+SKVLL+DGK ERV+LAH
Sbjct: 120 SVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHP 179
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEA+TEYRV+GP INGCSW+EL+PLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 180 SGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 239
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H WKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 240 HQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 299
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
E P +E+P++LRFVA MP HM+ISWN+MSSYLV
Sbjct: 300 TGGWHENGTPWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV 340
>C0HH71_MAIZE (tr|C0HH71) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 237
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 181/221 (81%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L + WN ACEA Q+YWALVIGTP E+EG+I AP+SKVLL+DGK ERV+LAH
Sbjct: 17 SVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHP 76
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEA+TEYRV+GP INGCSW+EL+PLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 77 SGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 136
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H WKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 137 HQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 196
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
E P +E+P++LRFVA MP HM+ISWN+MSSYLV
Sbjct: 197 TGGWHENGTPWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV 237
>K7U1X9_MAIZE (tr|K7U1X9) Uncharacterized protein OS=Zea mays GN=ZEAMMB73_778378
PE=4 SV=1
Length = 478
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 181/221 (81%)
Query: 46 SVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
SV L + WN ACEA Q+YWALVIGTP E+EG+I AP+SKVLL+DGK ERV+LAH
Sbjct: 258 SVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHP 317
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S I+ QEA+TEYRV+GP INGCSW+EL+PLT RKHQLRVHCAEALGTPIVGDYKYGWFV
Sbjct: 318 SGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPIVGDYKYGWFV 377
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHV 225
H WKQ P+ D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL
Sbjct: 378 HQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSS 437
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
E P +E+P++LRFVA MP HM+ISWN+MSSYLV
Sbjct: 438 TGGWHENGTPWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV 478
>C5YIB1_SORBI (tr|C5YIB1) Putative uncharacterized protein Sb07g027030 OS=Sorghum
bicolor GN=Sb07g027030 PE=4 SV=1
Length = 439
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 179/212 (84%)
Query: 55 LAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
L WN ACEA Q+YWALVIGTP E+EG+I AP+SKVLL+DGK ERV+LAH S I+ QEA
Sbjct: 228 LTWNKACEAYVQKYWALVIGTPKEREGVICAPISKVLLDDGKAERVILAHPSGIDGAQEA 287
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFVH WKQ P+
Sbjct: 288 ITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQTWKQNPQ 347
Query: 175 VDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELH 234
D EP TG+PY++RRPEGLE+QKGSVLSKVPLLHLHCRE+ +PNI+KFL + E
Sbjct: 348 PDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSTGEWHENGA 407
Query: 235 PSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
P +E+P++LRFVA MP HM+ISWN+MSSYLV
Sbjct: 408 PWAKEKPNLLRFVAPMPPHMKISWNIMSSYLV 439
>I1I8M9_BRADI (tr|I1I8M9) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI3G40480 PE=3 SV=1
Length = 479
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 183/226 (80%), Gaps = 2/226 (0%)
Query: 41 IFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
+F + TA + WN ACE+ QRYWALVIGTP E EG+I APL+KVLL+DGK ERV
Sbjct: 256 LFTSVKLARTASPI--WNSACESYLQRYWALVIGTPKESEGVISAPLTKVLLDDGKAERV 313
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+LAH S I+ QEAVTEYRV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYK
Sbjct: 314 ILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYK 373
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
YGWFVH RWKQ P+ D EP TG+ Y++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+
Sbjct: 374 YGWFVHQRWKQNPQPDFEPFTGEQYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIA 433
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
KFL ++ P +E+P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 434 KFLSNTGDWHDDGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 479
>M8BA18_AEGTA (tr|M8BA18) RNA pseudourine synthase 3, mitochondrial OS=Aegilops
tauschii GN=F775_04253 PE=4 SV=1
Length = 368
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 173/201 (86%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
QRYWALVIGTP E EGII APL+KVLL+DGK ERV+LAH S I+ QEAVTEYRV+GP I
Sbjct: 168 QRYWALVIGTPTESEGIISAPLTKVLLDDGKAERVILAHPSGIDGAQEAVTEYRVMGPTI 227
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
NGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQ P+ D EP TG+PY
Sbjct: 228 NGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPY 287
Query: 186 RMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLR 245
++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL + + P +E+P++LR
Sbjct: 288 KLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSNTGEWHDNGTPWSKEKPNLLR 347
Query: 246 FVATMPSHMRISWNLMSSYLV 266
F+A +P+HM+ISWN+MSSYLV
Sbjct: 348 FIAPLPAHMKISWNIMSSYLV 368
>B9N0H4_POPTR (tr|B9N0H4) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_681053 PE=2 SV=1
Length = 177
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 163/177 (92%)
Query: 90 VLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAE 149
VLL+DGKTERV+LA HS++EP ++AVTEYRVLGP INGCSW+ELRPLTSRKHQLRVHCAE
Sbjct: 1 VLLDDGKTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAE 60
Query: 150 ALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHL 209
ALGTPIVGDYKYGWFVH RWKQMPRVDIEP++GKPY++R PEG+++QKGSVL+KVPLLHL
Sbjct: 61 ALGTPIVGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHL 120
Query: 210 HCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
HCREL LPNI+KFL V + E +HP+L +PD+LRFVA+MPSHM+ISWNLMSS+LV
Sbjct: 121 HCRELVLPNIAKFLDVLDGKSENVHPALSTRPDLLRFVASMPSHMKISWNLMSSFLV 177
>M8A4M3_TRIUA (tr|M8A4M3) RNA pseudourine synthase 3, mitochondrial OS=Triticum
urartu GN=TRIUR3_25998 PE=4 SV=1
Length = 400
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 173/233 (74%), Gaps = 32/233 (13%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSK--------------------------------VLLN 93
QRYWALVIGTP E EG+I APL+K VLL+
Sbjct: 168 QRYWALVIGTPTESEGVISAPLTKGSRDHARPQENSSLRCSNRCPKIGHRQEGNRDVLLD 227
Query: 94 DGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGT 153
DGK ERV+LAH S I+ QEAVTEYRV+GP INGCSW+ELRPLT RKHQLRVHCAEALGT
Sbjct: 228 DGKAERVILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGT 287
Query: 154 PIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRE 213
PIVGDYKYGWFVH RWKQ P+ D EP TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE
Sbjct: 288 PIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCRE 347
Query: 214 LALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ +PNI+KFL + + P +E+P++LRF+A +P+HM+ISWN+MSSYLV
Sbjct: 348 MVVPNIAKFLSNTGEWHDNGTPWSKEKPNLLRFIAPLPAHMKISWNIMSSYLV 400
>M1B240_SOLTU (tr|M1B240) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400013566 PE=4 SV=1
Length = 165
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 141/166 (84%), Gaps = 1/166 (0%)
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
MLA S +E EAVTEYR+LGP INGCSW+ELRP TSRKHQ+RVHCAEALGTPIVGDYK
Sbjct: 1 MLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDYK 60
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
YGWFVH +WKQMPRVD+EPTTGKPYR++RPEGL+VQKGSVLSKVPLLHLHCREL LPNI+
Sbjct: 61 YGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 120
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
KF+ + + ++ H +PD+LRFVA MPS M+ISW LMSS L+
Sbjct: 121 KFIELHSRKTKK-HSDYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 165
>M0ZA53_HORVD (tr|M0ZA53) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 146
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/146 (73%), Positives = 126/146 (86%)
Query: 121 LGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPT 180
+GP INGCSW+ELRPLT RKHQLRVHCAEALGTPIVGDYKYGWFVH RWKQ P+ D EP
Sbjct: 1 MGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPF 60
Query: 181 TGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQ 240
TG+PY++RRPEGLEVQKGSVLSKVPLLHLHCRE+ +PNI+KFL + + P +E+
Sbjct: 61 TGEPYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSNTGEWHDNGTPWSKEK 120
Query: 241 PDVLRFVATMPSHMRISWNLMSSYLV 266
P++LRF+A MP+HM+ISWN+MSSYLV
Sbjct: 121 PNLLRFIAPMPAHMKISWNIMSSYLV 146
>D7UBZ2_VITVI (tr|D7UBZ2) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_03s0180g00270 PE=4 SV=1
Length = 476
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 135/200 (67%), Gaps = 6/200 (3%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
+RYWALVIG+P G+I APL KV+++DGK+ER+ + + Q A+TEYRV+
Sbjct: 281 RRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSC 340
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
+G +W+EL PLT RKHQLRVHCAE LGTPIVGDYKYGW H +WKQ+ + +IE +
Sbjct: 341 HGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENL 400
Query: 186 RMRR--PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
R+ P GL+++ GS+L K P LHLHC+++ LPN+S L + S E L +
Sbjct: 401 SNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSEL----ES 456
Query: 244 LRFVATMPSHMRISWNLMSS 263
L FVA +PSHM+ SW++++S
Sbjct: 457 LEFVAPLPSHMQRSWDILNS 476
>B9RY90_RICCO (tr|B9RY90) Ribosomal pseudouridine synthase, putative OS=Ricinus
communis GN=RCOM_0811340 PE=4 SV=1
Length = 536
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 137/200 (68%), Gaps = 7/200 (3%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++YWALVIG+P ++GII APL KV+++DGK++R+ + ++ Q AVT+YRV+
Sbjct: 342 RKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESS- 400
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
+G +W+EL P+T RKHQLRVHCAE LGTPIVGDYKYGW VH +WKQ+P ++E + +
Sbjct: 401 HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENA 460
Query: 186 RMRR--PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
++ P G++++ GS+ K P LHLHC+++ LP++S+ L + S L+
Sbjct: 461 LCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKS---- 516
Query: 244 LRFVATMPSHMRISWNLMSS 263
+ A +PS+M+ SW++++S
Sbjct: 517 IELDAPLPSYMQRSWDILNS 536
>M5VIW4_PRUPE (tr|M5VIW4) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004969mg PE=4 SV=1
Length = 483
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 134/209 (64%), Gaps = 8/209 (3%)
Query: 58 NDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTE 117
+DA +RYWALVIG+P +++G+I APL KV++++GK++R+ + + S P Q A+T+
Sbjct: 280 DDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITK 339
Query: 118 YRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDI 177
Y+V+G G +W+EL PLT RKHQLRVHCAE L TPIVGDYKYGW H WK + +
Sbjct: 340 YKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNN 399
Query: 178 EPTTGK--PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELH- 234
E + + P R P L ++ GSV K P LHLHC+++ LPN++ L +LH
Sbjct: 400 ECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNV-----KLHS 454
Query: 235 PSLREQPDVLRFVATMPSHMRISWNLMSS 263
S + + L VA +PS M+ SWN+ +S
Sbjct: 455 DSDLSELESLELVAALPSFMQRSWNITNS 483
>M4E0X7_BRARP (tr|M4E0X7) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra022424 PE=4 SV=1
Length = 474
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 8/229 (3%)
Query: 35 QKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLND 94
Q A L+ + + + + ++ ++Y ALVIG P + G I APL KV+++D
Sbjct: 246 QTAATLLHSIFREKTSGASAYGVKKNIKSLKRKYLALVIGCPRRQRGQISAPLRKVVVDD 305
Query: 95 GKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTP 154
GK++R+ + + + Q A+TEYRV+ +G +W+ELRPLT RKHQLRVHCAE LGTP
Sbjct: 306 GKSDRITVNVNGELVSTQHAITEYRVVESSPHGYTWLELRPLTGRKHQLRVHCAEVLGTP 365
Query: 155 IVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCREL 214
I+GDYKYGW H + P V E T KP P GL+++ G V SK P LHLH +++
Sbjct: 366 ILGDYKYGWQAHK--TREPFVSPENTRTKPSPS--PFGLDMEGGDVSSKQPHLHLHSKQI 421
Query: 215 ALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
LPNI + L E SP+ L D L+F A +P+HM++S+NL+ S
Sbjct: 422 DLPNICQLLEKLEVSPDSDISDL----DGLKFDAPLPTHMQLSFNLLKS 466
>I1IIQ2_BRADI (tr|I1IIQ2) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI4G08187 PE=4 SV=1
Length = 465
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 137/234 (58%), Gaps = 10/234 (4%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG +++ I + TA A D + QR Y ALVIGTP +G++ APL+KV
Sbjct: 237 LGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVIGTPRHSKGLLSAPLAKV 293
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
LL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RKHQLRVHCAE
Sbjct: 294 LLQDGKSERLTVKAGPNTTSVQDALTEYRVIESCPQGFTWLELFPLTGRKHQLRVHCAEV 353
Query: 151 LGTPIVGDYKYGWFVHNRWKQMPRVD-IEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHL 209
LGTPIVGDYKYG H W +P IE K R+ P GL + GSV+ + P LHL
Sbjct: 354 LGTPIVGDYKYGRQAHQNWSPLPAPQAIEEELLKKRRL--PFGLVLGGGSVVEEQPQLHL 411
Query: 210 HCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
HC+++ LP+IS + + + S E+ L FVA +P HMR+SW ++ S
Sbjct: 412 HCKQMVLPDISAAVQGLQSEDADRDFSDLEK---LSFVAPLPQHMRLSWEVLKS 462
>B9G227_ORYSJ (tr|B9G227) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_28343 PE=2 SV=1
Length = 465
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 11/212 (5%)
Query: 56 AWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
A D + QR Y ALVIGTP +G++ APL+K+LL DGK+ER+ + S Q+A
Sbjct: 258 ALADGTQHVLQRKYVALVIGTPRHPKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDA 317
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+ G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG H +W +P
Sbjct: 318 LTEYRVIESCPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQKWMPLPL 377
Query: 175 VDIEPTTGKPYRMRR---PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPE 231
P T +R+ P GL V GS+ + P LHLHC+++ LP++S LH + S
Sbjct: 378 ----PRTIDEELLRKRKLPFGLVVGGGSIAEEQPQLHLHCKQMVLPDVSVALHRLQSS-- 431
Query: 232 ELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+++P + + L FVA +P HMR+SW ++ S
Sbjct: 432 DVNPDFSDL-EKLNFVAPLPLHMRLSWEILKS 462
>G7ZV99_MEDTR (tr|G7ZV99) RNA pseudourine synthase OS=Medicago truncatula
GN=MTR_023s0003 PE=4 SV=1
Length = 430
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 139/234 (59%), Gaps = 4/234 (1%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
+G K + + + T++ ND + QR YWALV+G P G+++APL KV
Sbjct: 199 MGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRRSGGVVNAPLGKV 258
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
++++GK++R+ + +S + Q AVTEYRV+ +G +W+EL PLT RKHQLRVHCAE
Sbjct: 259 VVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVHCAEV 318
Query: 151 LGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRR-PEGLEVQKGSVLSKVPLLHL 209
LGTPIVGDYKYG H +W Q ++E +T + + P GL + KGS+ K P LHL
Sbjct: 319 LGTPIVGDYKYGRQAHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNKGSISDKHPRLHL 378
Query: 210 HCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
HC+++ LPNIS+ L + + + + L A +P +M+ SW + +S
Sbjct: 379 HCKQIVLPNISQALQNVQSVSDSSYD--LSAVESLELEADLPPYMKKSWEVTNS 430
>B8BCS6_ORYSI (tr|B8BCS6) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_30347 PE=2 SV=1
Length = 465
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 11/212 (5%)
Query: 56 AWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
A D + QR Y ALVIGTP +G++ APL+K+LL DGK+ER+ + S Q+A
Sbjct: 258 ALADGTQHVLQRKYVALVIGTPRHPKGLLSAPLAKILLQDGKSERLTVRASSNAASVQDA 317
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+ G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG H +W +P
Sbjct: 318 LTEYRVIESCPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQKWMPLPL 377
Query: 175 VDIEPTTGKPYRMRR---PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPE 231
P T +R+ P GL V GS+ + P LHLHC+++ LP++S LH + S
Sbjct: 378 ----PRTIDEELLRKRKLPFGLVVGGGSIAEEQPQLHLHCKQMVLPDVSVALHRLQSS-- 431
Query: 232 ELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+++P + + L FVA +P HMR+SW ++ S
Sbjct: 432 DVNPDFSDL-EKLNFVAPLPLHMRLSWEILKS 462
>I1JB03_SOYBN (tr|I1JB03) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 427
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
+RYWALV+G P +G++ A L KV++++G+++R+ + +ST+ Q A+TEYRV+
Sbjct: 233 RRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSS 292
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
G +W+EL PLT RKHQLRVHCAE LGTPIVGDYKYGW H +W ++E + +
Sbjct: 293 QGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELL 352
Query: 186 RMRR-PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVL 244
+ P GL + KGS+ P LHLHC+++ LPNIS+ L + S SL E+ L
Sbjct: 353 NEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQNVQ-SASSCDLSLVEE---L 408
Query: 245 RFVATMPSHMRISWNLMS 262
VA +P +M+ SW++ +
Sbjct: 409 ELVADLPPYMQRSWDVTN 426
>I1QLT5_ORYGL (tr|I1QLT5) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 465
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 133/212 (62%), Gaps = 11/212 (5%)
Query: 56 AWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
A D + QR Y ALVIGTP +G++ APL+K+LL DGK+ER+ + S Q+A
Sbjct: 258 ALADGTQHVLQRKYVALVIGTPRHPKGLLSAPLAKILLQDGKSERLTVRASSNAASVQDA 317
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+ G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG H +W +P
Sbjct: 318 LTEYRVIESCPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQKWMPLPL 377
Query: 175 VDIEPTTGKPYRMRR---PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPE 231
P T +R+ P GL V GS+ + P LHLHC+++ LP++S LH + SP
Sbjct: 378 ----PRTIDEELLRKRKLPFGLVVGGGSIAEEQPQLHLHCKQMVLPDVSVALHRLQ-SP- 431
Query: 232 ELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+++P + + L FVA +P HMR+SW ++ S
Sbjct: 432 DVNPDFSDL-EKLNFVAPLPLHMRLSWEILKS 462
>M5VVR6_PRUPE (tr|M5VVR6) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004969mg PE=4 SV=1
Length = 481
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Query: 58 NDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTE 117
+DA +RYWALVIG+P +++G+I APL KV++++GK++R+ + + S P Q A+T+
Sbjct: 280 DDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITK 339
Query: 118 YRVLGPKINGC-SWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVD 176
Y+V+G + C +W+EL PLT RKHQLRVHCAE L TPIVGDYKYGW H WK + +
Sbjct: 340 YKVIG---SPCYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSN 396
Query: 177 IEPTTGK--PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELH 234
E + + P R P L ++ GSV K P LHLHC+++ LPN++ L +LH
Sbjct: 397 NECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNV-----KLH 451
Query: 235 -PSLREQPDVLRFVATMPSHMRISWNLMSS 263
S + + L VA +PS M+ SWN+ +S
Sbjct: 452 SDSDLSELESLELVAALPSFMQRSWNITNS 481
>B9HS61_POPTR (tr|B9HS61) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_201901 PE=4 SV=1
Length = 324
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 127/198 (64%), Gaps = 7/198 (3%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++YWALVIG+P +G+I APL KV++++GK++R+ + +S Q AVT+YRV+
Sbjct: 132 RKYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESS- 190
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
+G +W+EL PLT RKHQLRVHCAE LGTPIVGDYKY W H WKQ+ +IE +
Sbjct: 191 HGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKS 250
Query: 186 RMRR--PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
+ P L++ GS+ K P LHLHC+++ LP++SK L + S + L
Sbjct: 251 LSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLAS---- 306
Query: 244 LRFVATMPSHMRISWNLM 261
L+F A +P +M+ SW+++
Sbjct: 307 LKFDAPLPPYMKKSWDIL 324
>M1CF74_SOLTU (tr|M1CF74) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400025766 PE=4 SV=1
Length = 231
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 124/200 (62%), Gaps = 6/200 (3%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++YWALVIG P GII APL K++L++GK+ER+ + Q AVTEYR++G
Sbjct: 36 KKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSE 95
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
G +W+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW H + K +P G
Sbjct: 96 KGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLGVQI 155
Query: 186 RMRRPE--GLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
++P+ L + GS+ K P LHLHC+E+ LPNIS L + + + + +
Sbjct: 156 PRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL----QRAQVVSDTDLVDVES 211
Query: 244 LRFVATMPSHMRISWNLMSS 263
++ VA +P HM+ SW+ +SS
Sbjct: 212 IKLVAPLPFHMQKSWDCLSS 231
>M1CF70_SOLTU (tr|M1CF70) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400025766 PE=4 SV=1
Length = 467
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 124/200 (62%), Gaps = 6/200 (3%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++YWALVIG P GII APL K++L++GK+ER+ + Q AVTEYR++G
Sbjct: 272 KKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSE 331
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
G +W+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW H + K +P G
Sbjct: 332 KGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLGVQI 391
Query: 186 RMRRPE--GLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
++P+ L + GS+ K P LHLHC+E+ LPNIS L + + + + +
Sbjct: 392 PRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL----QRAQVVSDTDLVDVES 447
Query: 244 LRFVATMPSHMRISWNLMSS 263
++ VA +P HM+ SW+ +SS
Sbjct: 448 IKLVAPLPFHMQKSWDCLSS 467
>M0W6Q7_HORVD (tr|M0W6Q7) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 254
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 138/245 (56%), Gaps = 12/245 (4%)
Query: 22 LTKRVVASYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKE 80
L + LG +++ I + TA A D + QR Y ALV+GTP +
Sbjct: 16 LDRDCSGVLVLGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVMGTPRHPK 72
Query: 81 GIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRK 140
G++ APL+KVLL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RK
Sbjct: 73 GLLSAPLAKVLLQDGKSERLTVRAGPNTTSVQDALTEYRVIESCPQGFTWLELFPLTGRK 132
Query: 141 HQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY--RMRRPEGLEVQKG 198
HQLRVHCAE LGTPIVGDYKYG H W +P + T K + R P GL + G
Sbjct: 133 HQLRVHCAEVLGTPIVGDYKYGRQAHQDWTPLP---VSQTVDKELLRKQRLPFGLVLGGG 189
Query: 199 SVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISW 258
S+ + P LHLHC+++ LP+IS + + + S E+ L FVA +P HMR+SW
Sbjct: 190 SIAEQQPQLHLHCKQMMLPDISAAVQGLQSEDADRDFSDLEK---LSFVAPLPLHMRLSW 246
Query: 259 NLMSS 263
++ S
Sbjct: 247 EVLKS 251
>F2EHA5_HORVD (tr|F2EHA5) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 472
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 136/235 (57%), Gaps = 12/235 (5%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG +++ I + TA A D + QR Y ALV+GTP +G++ APL+KV
Sbjct: 244 LGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVMGTPRHPKGLLSAPLAKV 300
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
LL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RKHQLRVHCAE
Sbjct: 301 LLQDGKSERLTVRAGPNTTSVQDALTEYRVIESCPQGFTWLELFPLTGRKHQLRVHCAEV 360
Query: 151 LGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY--RMRRPEGLEVQKGSVLSKVPLLH 208
LGTPIVGDYKYG H W +P + T K + R P GL + GS+ + P LH
Sbjct: 361 LGTPIVGDYKYGRQAHQDWTPLP---VSQTVDKELLRKQRLPFGLVLGGGSIAEQQPQLH 417
Query: 209 LHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
LHC+++ LP+IS + + + S E+ L FVA +P HMR+SW ++ S
Sbjct: 418 LHCKQMMLPDISAAVQGLQSEDADRDFSDLEK---LSFVAPLPLHMRLSWEVLKS 469
>M0W6Q6_HORVD (tr|M0W6Q6) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 425
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 136/235 (57%), Gaps = 12/235 (5%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG +++ I + TA A D + QR Y ALV+GTP +G++ APL+KV
Sbjct: 197 LGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVMGTPRHPKGLLSAPLAKV 253
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
LL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RKHQLRVHCAE
Sbjct: 254 LLQDGKSERLTVRAGPNTTSVQDALTEYRVIESCPQGFTWLELFPLTGRKHQLRVHCAEV 313
Query: 151 LGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY--RMRRPEGLEVQKGSVLSKVPLLH 208
LGTPIVGDYKYG H W +P + T K + R P GL + GS+ + P LH
Sbjct: 314 LGTPIVGDYKYGRQAHQDWTPLP---VSQTVDKELLRKQRLPFGLVLGGGSIAEQQPQLH 370
Query: 209 LHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
LHC+++ LP+IS + + + S E+ L FVA +P HMR+SW ++ S
Sbjct: 371 LHCKQMMLPDISAAVQGLQSEDADRDFSDLEK---LSFVAPLPLHMRLSWEVLKS 422
>R0HY69_9BRAS (tr|R0HY69) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10013603mg PE=4 SV=1
Length = 476
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 127/198 (64%), Gaps = 8/198 (4%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++Y ALVIG P + G I APL KV+++DGK++R+ + + + Q A+TEYRV+
Sbjct: 279 RKYMALVIGCPRRQRGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSP 338
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
+G +W+ELRPLT RKHQLRVHCAE LGTPIVGDYKYGW H + P V E T KP
Sbjct: 339 HGYTWLELRPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK--SREPLVTSENTPTKP- 395
Query: 186 RMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLR 245
P GL++ G V SK P LHLH +++ LPNIS+ L + S + + L+
Sbjct: 396 -QSSPFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDID----SLK 450
Query: 246 FVATMPSHMRISWNLMSS 263
F A +P+HM++S+NL+ S
Sbjct: 451 FDAPLPTHMQLSFNLLKS 468
>J3MVI1_ORYBR (tr|J3MVI1) Uncharacterized protein OS=Oryza brachyantha
GN=OB09G10090 PE=4 SV=1
Length = 441
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 134/221 (60%), Gaps = 13/221 (5%)
Query: 47 VTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
T + A D + QR Y ALVIGTP +G++ APL+KVLL DGK+ER+ +
Sbjct: 227 ATFREKTADALADGTQHVLQRKYLALVIGTPRHPKGLLSAPLAKVLLQDGKSERLTVRAS 286
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S P Q+A+TEYRV+ +G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG
Sbjct: 287 SNAAPVQDALTEYRVIEYCPHGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQA 346
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRR---PEGLEVQKGSVLSKVPLLHLHCRELALPNISKF 222
H W +P P T +R+ P GL V GS+ + P LHLHC+++ LP+IS
Sbjct: 347 HQNWMPLPL----PRTINEELLRKRKLPFGL-VGGGSIAEEQPQLHLHCKQMVLPDISMA 401
Query: 223 LHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+H + ++ P L + + L FVA +P HMR+SW ++ S
Sbjct: 402 VHRLQ---SDVDPDLSDF-EKLNFVAPLPLHMRLSWEILKS 438
>M8ARA9_AEGTA (tr|M8ARA9) RNA pseudourine synthase 4, mitochondrial OS=Aegilops
tauschii GN=F775_07074 PE=4 SV=1
Length = 468
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 136/236 (57%), Gaps = 14/236 (5%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG +++ I + TA A D + QR Y ALV+GTP +G++ APL+KV
Sbjct: 240 LGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVMGTPRHPKGLLSAPLAKV 296
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
LL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RKHQLRVHCAE
Sbjct: 297 LLQDGKSERLTVRAGPNTTSVQDALTEYRVIESCPRGFTWLELFPLTGRKHQLRVHCAEV 356
Query: 151 LGTPIVGDYKYGWFVHNRWKQMP---RVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLL 207
LGTPIVGDYKYG H W +P VD E + R P GL + GSV + P L
Sbjct: 357 LGTPIVGDYKYGRQAHQDWTPLPVPQTVDEELL----RKQRLPFGLVLGGGSVAEEQPQL 412
Query: 208 HLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
HLHC+++ LP+IS + + E S E+ L FVA +P HMR+SW ++ S
Sbjct: 413 HLHCKQMMLPDISAAVQGLQSEDAERDFSGLEK---LSFVAPLPLHMRLSWEVLKS 465
>J3LQB7_ORYBR (tr|J3LQB7) Uncharacterized protein OS=Oryza brachyantha
GN=OB03G32430 PE=4 SV=1
Length = 449
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 132/221 (59%), Gaps = 12/221 (5%)
Query: 47 VTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHH 105
T + A D + QR Y ALVIGTP +G++ APL+KVLL DGK+ER+ +
Sbjct: 234 ATFREKTADALADGTQHVLQRKYLALVIGTPRHPKGLLSAPLAKVLLQDGKSERLTVRAS 293
Query: 106 STIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
S Q+A+TEYRV+ +G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG
Sbjct: 294 SNAASVQDALTEYRVIEYCPHGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQA 353
Query: 166 HNRWKQMPRVDIEPTTGKPYRMRR---PEGLEVQKGSVLSKVPLLHLHCRELALPNISKF 222
H W +P P T +R+ P GL V GS+ + P LHLHC+++ LP+IS
Sbjct: 354 HQNWMPLPL----PRTINEELLRKRKLPFGLVVGGGSIAEEQPQLHLHCKQMVLPDISVA 409
Query: 223 LHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+H + ++ P + + L FVA +P HMR+SW ++ S
Sbjct: 410 VHRLQ---SDVDPDFSDL-EKLNFVAPLPLHMRLSWEILKS 446
>K4B2X4_SOLLC (tr|K4B2X4) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g107580.2 PE=4 SV=1
Length = 467
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 125/204 (61%), Gaps = 14/204 (6%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++YWALVIG P GII APL K++L++GK+ER+ + Q AVTEYR++G
Sbjct: 272 KKYWALVIGCPRRSGGIISAPLGKLVLDNGKSERITIMSDVREPSAQYAVTEYRIIGSSE 331
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMP------RVDIEP 179
G +W+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW H + K +P + +E
Sbjct: 332 KGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLVVEI 391
Query: 180 TTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLRE 239
KP P L + GS+ K P LHLHC+E+ LPNIS L + + + +
Sbjct: 392 PRQKP----DPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL----QRAQVVSDADLV 443
Query: 240 QPDVLRFVATMPSHMRISWNLMSS 263
+ ++ VA +P HM+ SW+ +S+
Sbjct: 444 DVESIKLVAPLPFHMQKSWDCLSA 467
>M7YVT4_TRIUA (tr|M7YVT4) RNA pseudourine synthase 4, mitochondrial OS=Triticum
urartu GN=TRIUR3_18246 PE=4 SV=1
Length = 468
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 135/236 (57%), Gaps = 14/236 (5%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG +++ I + TA A D + QR Y ALV+GTP +G++ APL+KV
Sbjct: 240 LGRTQLSASILHAIFREKTAD---ALADGTQQVLQRKYVALVMGTPRHPKGLLSAPLAKV 296
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
LL DGK+ER+ + Q+A+TEYRV+ G +W+EL PLT RKHQLRVHCAE
Sbjct: 297 LLQDGKSERLTVRAGPNTTSVQDALTEYRVIESCPRGFTWLELFPLTGRKHQLRVHCAEV 356
Query: 151 LGTPIVGDYKYGWFVHNRWKQMP---RVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLL 207
LGTPIVGDYKYG H W +P VD E + R P GL + GSV + P L
Sbjct: 357 LGTPIVGDYKYGRQAHQDWTPLPVPQTVDEELL----RKQRLPFGLVLGGGSVAEEQPQL 412
Query: 208 HLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
HLHC+++ LP+IS + E S E+ L FVA +P HMR+SW ++ S
Sbjct: 413 HLHCKQMMLPDISTAFQGLQSEDAERDFSGLEK---LSFVAPLPLHMRLSWEVLKS 465
>M0SLI3_MUSAM (tr|M0SLI3) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 588
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 32 LGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKV 90
LG + + I + T+ L + + QR Y ALVIGTP +G+I APL+K+
Sbjct: 359 LGRTQTSATILHSLFREKTSGALADDINVTQRPLQRKYLALVIGTPRHSKGLISAPLAKI 418
Query: 91 LLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEA 150
+L DGK+ER+++A Q A+TEY+V+ + +W+EL PLT RKHQLRVHCAE
Sbjct: 419 VLEDGKSERIIIADDGKSASSQHALTEYKVIRSS-HDYTWLELFPLTGRKHQLRVHCAEV 477
Query: 151 LGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLH 210
LGTPIVGD+KYG H +W+ M + K + + P GLE+ GS+ K+P LHLH
Sbjct: 478 LGTPIVGDHKYGRHAHRKWEPMRLPESIIKGEKIPKEKLPFGLELDGGSISEKLPGLHLH 537
Query: 211 CRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMSSYL 265
C+++ LPNIS L + S + + + L VA +PSHM+ SW ++SS L
Sbjct: 538 CKQMVLPNISVALQQLQSSTDHDFSKVEK----LNLVAPLPSHMQRSWEILSSLL 588
>D7L9Z2_ARALL (tr|D7L9Z2) Pseudouridine synthase family protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_318699 PE=4 SV=1
Length = 477
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 127/198 (64%), Gaps = 8/198 (4%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++Y ALVIG P ++G I APL KV+++DGK++R+ + + + Q A+TEY+V+
Sbjct: 280 RKYMALVIGCPRRQKGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYKVIESSP 339
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPY 185
+G +W+ELRPLT RKHQLRVHCAE LGTPI+GDYKYGW H + P V E T KP
Sbjct: 340 HGYTWLELRPLTGRKHQLRVHCAEVLGTPILGDYKYGWQAHK--AREPFVSSETTPTKPS 397
Query: 186 RMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLR 245
P GL++ G V SK P LHLH +++ LPNIS+ L + S + L +
Sbjct: 398 SS--PFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSL----K 451
Query: 246 FVATMPSHMRISWNLMSS 263
F A +PSHM++S+NL+ S
Sbjct: 452 FDAPLPSHMQLSFNLLKS 469
>K3YR11_SETIT (tr|K3YR11) Uncharacterized protein OS=Setaria italica
GN=Si016705m.g PE=4 SV=1
Length = 597
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 138/246 (56%), Gaps = 14/246 (5%)
Query: 22 LTKRVVASYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQR-YWALVIGTPNEKE 80
L + LG +++ I + TA A D + QR Y ALVIG P +
Sbjct: 359 LDRDCSGVLVLGRTQLSASIMHAIFREKTAD---ALADGTQQVLQRKYVALVIGRPRHSK 415
Query: 81 GIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRK 140
G++ APL+K++L DGK+ER+ + S Q+A+TEYRV+ G +W+EL P T RK
Sbjct: 416 GLLSAPLAKIVLQDGKSERLTVCAGSNPASVQDALTEYRVIESCPQGYTWLELFPRTGRK 475
Query: 141 HQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMP---RVDIEPTTGKPYRMRRPEGLEVQK 197
HQLRVHCAE LGTPIVGDYKYG H W +P +D+E + + P GL +
Sbjct: 476 HQLRVHCAEVLGTPIVGDYKYGRQAHQNWMPLPIPQAMDVEMLK----KRKLPFGLALGG 531
Query: 198 GSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRIS 257
GSV P LHLHC+++ LP+IS + + S + S E+ L FVA +P HMR+S
Sbjct: 532 GSVAEDQPQLHLHCKQMILPDISAAMQRLQSSESNHNFSDLEK---LSFVAPLPLHMRLS 588
Query: 258 WNLMSS 263
W ++ S
Sbjct: 589 WEILKS 594
>C4J8T2_MAIZE (tr|C4J8T2) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 272
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 126/211 (59%), Gaps = 9/211 (4%)
Query: 56 AWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
A D + QR Y ALVIG P +G++ APL+KV+L DG++ER+ + S Q+A
Sbjct: 65 ALGDGTQQVLQRKYVALVIGRPRHPKGLLSAPLAKVVLQDGRSERLTVCAGSNTASVQDA 124
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+ G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG H W +P
Sbjct: 125 LTEYRVIESFPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQNWMPLP- 183
Query: 175 VDIEPTTGKPYRMRR--PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEE 232
+ T K +R P GL + GSV + P LHLHC+++ LP+IS + S +
Sbjct: 184 --MPQTIDKEMLKKRKLPFGLTLGGGSVAEQQPQLHLHCKQMILPDISAAMQQLRSSDAD 241
Query: 233 LHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
S E+ L FVA +P HM++SW ++ S
Sbjct: 242 HDFSDLEK---LSFVAPLPLHMQLSWKILLS 269
>D8SN49_SELML (tr|D8SN49) Putative uncharacterized protein OS=Selaginella
moellendorffii GN=SELMODRAFT_121195 PE=3 SV=1
Length = 355
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 121/199 (60%), Gaps = 28/199 (14%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++Y ALVIG+P +G I APL K++L DGK++RV++A E A+TEY+VL +
Sbjct: 137 RKYIALVIGSPTADKGFISAPLLKMVLEDGKSDRVLIAADPKSENAIPAITEYQVLKRSV 196
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRW---KQMPRVDIEPTTG 182
GC+W++LRPLT RKHQLRVHCA+ LG PIVGD KYG+ H +W + M VD
Sbjct: 197 LGCTWLQLRPLTGRKHQLRVHCAQGLGLPIVGDMKYGFNTHKKWMAERNMNTVD------ 250
Query: 183 KPYRMRRPEGLEVQK---GSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLRE 239
P+ ++ + GSV+SK PLLHLH REL +P + K P + L
Sbjct: 251 -------PQDIKARNKMAGSVVSKNPLLHLHSRELTIPRL-------RKKPGAVDFGL-- 294
Query: 240 QPDVLRFVATMPSHMRISW 258
P+ +RFVA +P+HM SW
Sbjct: 295 DPERMRFVAPLPTHMESSW 313
>D8SR68_SELML (tr|D8SR68) Putative uncharacterized protein OS=Selaginella
moellendorffii GN=SELMODRAFT_123269 PE=3 SV=1
Length = 355
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 121/199 (60%), Gaps = 28/199 (14%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI 125
++Y ALVIG+P +G I APL K++L DGK++RV++A E A+TEY+VL +
Sbjct: 137 RKYIALVIGSPTADKGFISAPLLKMVLEDGKSDRVLIAADPKSENAIPAITEYQVLKRSV 196
Query: 126 NGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRW---KQMPRVDIEPTTG 182
GC+W++LRPLT RKHQLRVHCA+ LG PIVGD KYG+ H +W + M VD
Sbjct: 197 LGCTWLQLRPLTGRKHQLRVHCAQGLGLPIVGDMKYGFNTHKKWMAERNMNTVD------ 250
Query: 183 KPYRMRRPEGLEVQK---GSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLRE 239
P+ ++ + GSV+SK PLLHLH REL +P + K P + L
Sbjct: 251 -------PQDIKARNKMAGSVVSKNPLLHLHSRELTIPRL-------RKKPGAVDFGL-- 294
Query: 240 QPDVLRFVATMPSHMRISW 258
P+ +RFVA +P+HM SW
Sbjct: 295 DPERMRFVAPLPTHMESSW 313
>A9RZN1_PHYPA (tr|A9RZN1) Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_122050 PE=3 SV=1
Length = 283
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 115/198 (58%), Gaps = 15/198 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKI-N 126
Y ALVIG P +KEG I APL+KV+ + GK +++ + H S QEA+T+Y+VLG +
Sbjct: 87 YLALVIGVPEKKEGRISAPLAKVVSDSGKLDKMRVVHGSHPNA-QEAITDYKVLGSSLFA 145
Query: 127 GCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYR 186
GCSW+ELRPLT RKHQ+RVHCAE LG PIVGDYKYGW W R E T
Sbjct: 146 GCSWLELRPLTGRKHQIRVHCAEVLGMPIVGDYKYGWRALRLWPPTDRT--EDTKSSVLG 203
Query: 187 MRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR----EQPD 242
+R + G V S P LHLHCR+L LP++++ + R + +
Sbjct: 204 LR-------ESGHVWSSKPYLHLHCRQLILPDVAQAFKSQSRERSSAQTGARVSGSQFAE 256
Query: 243 VLRFVATMPSHMRISWNL 260
L +A +P HM +SWN+
Sbjct: 257 PLEIIAPLPPHMVVSWNM 274
>B6U2M4_MAIZE (tr|B6U2M4) RNA binding protein OS=Zea mays PE=2 SV=1
Length = 439
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 108/180 (60%), Gaps = 6/180 (3%)
Query: 56 AWNDACEATYQR-YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA 114
A D + QR Y ALVIG P +G++ APL+KV+L DG++ER+ + S Q+A
Sbjct: 255 ALGDGTQQVLQRKYVALVIGRPRHPKGLLSAPLAKVVLQDGRSERLTVCAGSNTASVQDA 314
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
+TEYRV+ G +W+EL P T RKHQLRVHCAE LGTPIVGDYKYG H W +P
Sbjct: 315 LTEYRVIESFPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHQNWMPLP- 373
Query: 175 VDIEPTTGKPYRMRR--PEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEE 232
+ T K +R P GL + GSV + P LHLHC+++ LP+IS + S +
Sbjct: 374 --MPQTIDKEMLKKRKLPFGLTLGGGSVAEQQPQLHLHCKQMILPDISAAMQQLRSSDAD 431
>M1B238_SOLTU (tr|M1B238) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400013566 PE=4 SV=1
Length = 94
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Query: 172 MPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPE 231
MPRVD+EPTTGKPYR++RPEGL+VQKGSVLSKVPLLHLHCREL LPNI+KF+ + + +
Sbjct: 1 MPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKTK 60
Query: 232 ELHPSLREQPDVLRFVATMPSHMRISWNLMSSYLV 266
+ H +PD+LRFVA MPS M+ISW LMSS L+
Sbjct: 61 K-HSDYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 94
>M1CF75_SOLTU (tr|M1CF75) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400025766 PE=4 SV=1
Length = 159
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 95/154 (61%), Gaps = 6/154 (3%)
Query: 112 QEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQ 171
Q AVTEYR++G G +W+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW H + K
Sbjct: 10 QYAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKH 69
Query: 172 MPRVDIEPTTGKPYRMRRPE--GLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKS 229
+P G ++P+ L + GS+ K P LHLHC+E+ LPNIS L +
Sbjct: 70 LPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL----QR 125
Query: 230 PEELHPSLREQPDVLRFVATMPSHMRISWNLMSS 263
+ + + + ++ VA +P HM+ SW+ +SS
Sbjct: 126 AQVVSDTDLVDVESIKLVAPLPFHMQKSWDCLSS 159
>D3BJX8_POLPA (tr|D3BJX8) Probable ribosomal large subunit pseudouridine synthase
C protein OS=Polysphondylium pallidum GN=PPL_08858 PE=3
SV=1
Length = 702
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 94/194 (48%), Gaps = 50/194 (25%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWAL+ TPN KEG I APL KV+ DG E +++A T + + A+TEY+V+ +
Sbjct: 551 YWALLTSTPNPKEGRIRAPLKKVV-QDG--EEMVIATKETGDGAKLAITEYKVVESSLTN 607
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
S+V L P T R HQLRVHCA L +PIVGD KYG
Sbjct: 608 ASFVSLWPETGRTHQLRVHCASILSSPIVGDKKYG------------------------- 642
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
+ + + Q SVL K LHLH R + E HP ++ DV V
Sbjct: 643 -KNDSVAFQ--SVLGKKIPLHLHARRV----------------EFFHPETNKKIDV---V 680
Query: 248 ATMPSHMRISWNLM 261
A +P ++ SW+++
Sbjct: 681 APLPKNLENSWDML 694
>G8ALK2_AZOBR (tr|G8ALK2) Pseudouridine synthase OS=Azospirillum brasilense Sp245
GN=AZOBR_110088 PE=3 SV=1
Length = 229
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V GTP E++G I PL KV N R+++A Q A+T+YRVLG + NG
Sbjct: 92 YWAVVAGTPPEEQGRIELPLKKVT-NKSGGWRIVVADDG-----QSAITDYRVLG-RGNG 144
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+W+EL+P T R HQ+RVHCA ALG P++GD +YG
Sbjct: 145 TTWLELKPHTGRTHQIRVHCATALGCPLLGDPQYG 179
>R7QAD7_CHOCR (tr|R7QAD7) Stackhouse genomic scaffold, scaffold_175 OS=Chondrus
crispus GN=CHC_T00003130001 PE=4 SV=1
Length = 399
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 94/214 (43%), Gaps = 49/214 (22%)
Query: 49 LTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTI 108
+ A LLA + + YWALV G+ +K G I P+ DGK R
Sbjct: 222 VGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPI------DGKRAR--------- 266
Query: 109 EPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
T+YRV+ W+EL P T RKHQLR+HCA+ LGTPIVGD KYG H
Sbjct: 267 -------TDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYG---HG- 315
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQ--KGSVLSKV-PLLHLHCRELALPNISKFLHV 225
PEGL+ Q G +LS + P LHL RE+ P +++ +
Sbjct: 316 --------------------GPEGLDGQNVDGGLLSLMNPGLHLFSREIQFPKLTQHMSG 355
Query: 226 FEKSPEELHPSLREQPDVLRFVATMPSHMRISWN 259
K + S + A +P HM+ +W
Sbjct: 356 GGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWK 389
>F4QCT4_DICFS (tr|F4QCT4) Putative ribosomal large subunit pseudouridine synthase
C protein OS=Dictyostelium fasciculatum (strain SH3)
GN=DFA_11427 PE=3 SV=1
Length = 720
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWAL+ TPN +EG I APL K++ N + ++A T + A+TEYRV+ +
Sbjct: 562 YWALLTSTPNPREGRIRAPLQKIVEN---GQEKVVATKETGNGAKLAITEYRVIENSMAD 618
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
S+V L P T R HQLRVHCA LG+PI+GD KYG
Sbjct: 619 TSFVALWPETGRTHQLRVHCASILGSPIIGDVKYG 653
>Q2G4F0_NOVAD (tr|Q2G4F0) Pseudouridine synthase OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=Saro_2837 PE=3
SV=1
Length = 436
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+C + + YWALV+G P+ K+G+I PL+K G E++M+ Q A + YR
Sbjct: 178 SCRSARKIYWALVVGVPDVKDGLIELPLAKQPGTGG--EKMMVDESGQ---GQSARSRYR 232
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N +WVEL+PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 233 VISRAGNAAAWVELQPLTGRTHQLRVHMA-AIGHPIVGDGKYG 274
>F0ZT35_DICPU (tr|F0ZT35) Putative uncharacterized protein OS=Dictyostelium
purpureum GN=DICPUDRAFT_81306 PE=3 SV=1
Length = 583
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 37/176 (21%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWAL+ G P +EG I APL KV++ G E+V+ A + + A+TEY+V+ ++
Sbjct: 425 YWALIAGAPKPREGRIRAPLKKVMI--GGEEKVIPAL-KIGDGAKLAITEYKVIQSSLDN 481
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
S+V L P T R HQLRVHCA L PI+GD KYG + N
Sbjct: 482 QSFVALWPETGRTHQLRVHCASVLNAPIIGDTKYGNKLVN-------------------- 521
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEE----LHPSLRE 239
E ++ S S + LHLH R + +F+H F P + L PSL+E
Sbjct: 522 ---ESIKTFLNSASSSLK-LHLHARRI------QFIHPFTNKPIDIIAPLPPSLKE 567
>E0MJS5_9RHOB (tr|E0MJS5) Pseudouridine synthase OS=Ahrensia sp. R2A130 GN=rluC
PE=3 SV=1
Length = 338
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 91/199 (45%), Gaps = 52/199 (26%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWALV G P +KEG I L K DG +R+ +A H AV+ YRV+
Sbjct: 176 TQKTYWALVRGIPRQKEGRISTYLVKEQTEDG--DRMRVAKHGERHA-DHAVSFYRVIDS 232
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGK 183
SWVEL P T R HQLRVH A+ +G PI+GD KY F W+
Sbjct: 233 NPRTVSWVELSPHTGRTHQLRVH-ADHIGHPIIGDNKY--FSTENWEM------------ 277
Query: 184 PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
P G++ + LHLH R + +P+ P+E P+L DV
Sbjct: 278 ------PGGIQKR----------LHLHARRIRIPH-----------PDENQPTL----DV 306
Query: 244 LRFVATMPSHMRISWNLMS 262
A +P HM SWNL +
Sbjct: 307 ---TAPLPPHMVQSWNLFA 322
>A5PEL5_9SPHN (tr|A5PEL5) Pseudouridine synthase OS=Erythrobacter sp. SD-21
GN=ED21_31224 PE=3 SV=1
Length = 376
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P+ ++G+I APL+K + G+ M H P A T+YRV+
Sbjct: 179 YWALVVGVPDIRQGVIEAPLAKQPGSGGEK---MHVDHEGGAP---AKTKYRVVESAGKK 232
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+W+EL+P+T R HQLRVHCA A+G PIVGD KYG
Sbjct: 233 VAWLELQPMTGRTHQLRVHCA-AMGHPIVGDGKYG 266
>Q2RQY9_RHORT (tr|Q2RQY9) Pseudouridine synthase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=Rru_A2659 PE=3 SV=1
Length = 330
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 75/151 (49%), Gaps = 37/151 (24%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P +G I L+KV G+ ER+ + E + AVT++RV+
Sbjct: 177 YWAIVVGRPPMLQGTIKGALAKV--AGGRGERMEINE----EEGKRAVTDFRVVDQAAKA 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
C+WVEL P T R HQLRVHC E +GTPI+GD KYG P +E T P RM
Sbjct: 231 CAWVELHPRTGRTHQLRVHCLE-MGTPILGDGKYGG---------PGAFLEGTE-LPKRM 279
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPN 218
HLH R LALP+
Sbjct: 280 --------------------HLHARALALPH 290
>G2T6N7_RHORU (tr|G2T6N7) Pseudouridine synthase OS=Rhodospirillum rubrum F11
GN=F11_13660 PE=3 SV=1
Length = 330
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 75/151 (49%), Gaps = 37/151 (24%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P +G I L+KV G+ ER+ + E + AVT++RV+
Sbjct: 177 YWAIVVGRPPMLQGTIKGALAKV--AGGRGERMEINE----EEGKRAVTDFRVVDQAAKA 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
C+WVEL P T R HQLRVHC E +GTPI+GD KYG P +E T P RM
Sbjct: 231 CAWVELHPRTGRTHQLRVHCLE-MGTPILGDGKYGG---------PGAFLEGTE-LPKRM 279
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPN 218
HLH R LALP+
Sbjct: 280 --------------------HLHARALALPH 290
>H6SNP0_RHOPH (tr|H6SNP0) Pseudouridine synthase OS=Rhodospirillum photometricum
DSM 122 GN=RSPPHO_02745 PE=3 SV=1
Length = 372
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 43/174 (24%)
Query: 48 TLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHST 107
T A L T + YWALV+G P ++G + L+K G+ ER+++
Sbjct: 178 TQAAARFLTAAFRARDTLKVYWALVVGRPPLEQGTMRGALAKE--ARGRGERMVVNE--- 232
Query: 108 IEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHN 167
E + A+T++RV+ + C+W++LRP T R HQLRVHC E +G PI+GD KYG
Sbjct: 233 -EDGRPAITDFRVIDQAVGACAWLDLRPRTGRTHQLRVHCLE-MGIPILGDGKYGG---- 286
Query: 168 RWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPL---LHLHCRELALPN 218
+G+ L ++P+ LHLH R LA+P+
Sbjct: 287 -----------------------------QGAFLPELPVARRLHLHARALAIPH 311
>A3WAF6_9SPHN (tr|A3WAF6) Pseudouridine synthase OS=Erythrobacter sp. NAP1
GN=NAP1_00495 PE=3 SV=1
Length = 395
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 54 LLAWNDACEATYQR----------YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLA 103
L+A ATY R YWALV+G P +EG I APL+K G+
Sbjct: 158 LIARTPGSAATYSRKFSGRSARKVYWALVVGVPEVREGTIDAPLAKQPGTGGEK------ 211
Query: 104 HHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
H E Q A T YRV+ +WVEL PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 212 MHVDEEGGQIAKTRYRVVERAGTRAAWVELEPLTGRTHQLRVHLA-AIGHPIVGDGKYG 269
>R5Q5J4_9PROT (tr|R5Q5J4) Pseudouridine synthase OS=Acetobacter sp. CAG:977
GN=BN820_00370 PE=4 SV=1
Length = 333
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P KEG I+A L KV G E V + ++ Q AVT YRV+
Sbjct: 180 YWALVVGNPEMKEGKINAKLLKVSGEQG-GESVKV----DMKNGQNAVTLYRVVDEAFKK 234
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
SW+E+ PLT R HQLRVHCA +G PIVGD KYG
Sbjct: 235 ASWLEMMPLTGRTHQLRVHCA-YMGHPIVGDGKYG 268
>Q0BUM2_GRABC (tr|Q0BUM2) Pseudouridine synthase OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=GbCGDNIH1_0582 PE=3
SV=1
Length = 366
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWA+V G P EG I PL L + + E V+LA + + A+T+YR L
Sbjct: 203 TEKVYWAVVAGRPVPVEGRIDRPL---LRQNDRNEPVVLADRKDRD-KVTAITDYRTLDH 258
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGK 183
+W+ELRPLT R HQLRVHCA A+ PI+GD +YG W+ + T
Sbjct: 259 AARKLAWLELRPLTGRMHQLRVHCA-AMDAPILGDERYGS-----WRNTDERGVRNTA-- 310
Query: 184 PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
EGL + LHLH R L+LP+ + + E +L P + E +
Sbjct: 311 -----LVEGLSRR----------LHLHARRLSLPHPAGGMLSVEA---DLSPHMAETFET 352
Query: 244 LRFVATMPSHMRI 256
L F A R+
Sbjct: 353 LGFTAPKAREGRL 365
>A9HLV5_GLUDA (tr|A9HLV5) Pseudouridine synthase OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=rluA PE=3 SV=1
Length = 325
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 84/195 (43%), Gaps = 56/195 (28%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G+I PL++ L G ++A + A++EY VL
Sbjct: 175 YWAIVVGRPSPASGVIDQPLAR--LGAGPGALTVVASRKDADA-AHALSEYEVLDAAGRK 231
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC EALGTPI+GD KYG +
Sbjct: 232 LSWLALSPLTGRTHQLRVHC-EALGTPILGDPKYGGDTAH-------------------- 270
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
PEG V LHLH R L LP HP+ L
Sbjct: 271 --PEGF----------VDRLHLHARTLDLP----------------HPAGGR----LVVS 298
Query: 248 ATMPSHMRISWNLMS 262
A +PSHMR ++ +
Sbjct: 299 ADLPSHMRETFRQLG 313
>G6XFU2_9PROT (tr|G6XFU2) Pseudouridine synthase OS=Gluconobacter morbifer G707
GN=GMO_03570 PE=3 SV=1
Length = 329
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 82/181 (45%), Gaps = 39/181 (21%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ GII PL+K+ G V+ A E A +EY L
Sbjct: 172 YWAVVVGRPSPASGIIDQPLAKI--GAGGASLVIAASRDE-EDAASAKSEYETLDAAGKK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW++L PLT R HQLRVHC E++GTPI+GD +YG +
Sbjct: 229 FSWLKLSPLTGRTHQLRVHC-ESIGTPILGDPRYGG----------------------KA 265
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
P+G + LHLH R+L +P+ + + P P +RE L FV
Sbjct: 266 AHPDGF----------IDRLHLHARQLDIPHPAGGRLIVTAPPP---PHMRETFRTLGFV 312
Query: 248 A 248
A
Sbjct: 313 A 313
>Q54N28_DICDI (tr|Q54N28) Putative uncharacterized protein OS=Dictyostelium
discoideum GN=DDB_0186558 PE=3 SV=1
Length = 718
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWAL+ TP KEG I APL KV++ G E+V + +T + + A+TEY+VL +
Sbjct: 563 YWALLGSTPTPKEGRIRAPLKKVVV--GGFEKV-VPTLTTGDGAKIAITEYKVLESSLTK 619
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
++ L P T R HQLRVHCA L TPI+GD KYG
Sbjct: 620 HCFISLWPETGRTHQLRVHCASVLNTPIIGDPKYG 654
>F6IMX3_9SPHN (tr|F6IMX3) Pseudouridine synthase OS=Novosphingobium sp. PP1Y
GN=PP1Y_AT18960 PE=3 SV=1
Length = 420
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P+ +G+I PL+K G+ H E Q A T YRVL N
Sbjct: 182 YWALVVGVPSISDGMIELPLAKQPGTGGEK------MHVDEEGGQPARTRYRVLDRAGNR 235
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+WVEL PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 236 AAWVELHPLTGRTHQLRVHMA-AIGHPIVGDGKYG 269
>B1ZDT3_METPB (tr|B1ZDT3) Pseudouridine synthase OS=Methylobacterium populi
(strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_2844
PE=3 SV=1
Length = 249
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 22 LTKRVVASYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEG 81
L +R A++ L L+ ++ L N L + + TY WALV G P+E EG
Sbjct: 59 LPRRPEAAHRLDRDTSGCLVLGRHARALARLNRLFADGKADKTY---WALVEGGPDEAEG 115
Query: 82 IIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKH 141
I PL+K +++ T ++T YRVLG + +G SW+EL+P+T R H
Sbjct: 116 RIDLPLAK------RSDDPRSWWMKTDPAGAPSLTLYRVLG-RADGLSWLELKPVTGRTH 168
Query: 142 QLRVHCAEALGTPIVGDYKYGWF--------VHNRWKQMP----RVDIEPTTGKPYRMRR 189
QLRVHCA A+G PI GD YG +H R +P R I P MR
Sbjct: 169 QLRVHCA-AMGWPIRGDAIYGSAGRAGPGLQLHARALSLPLYPKRDAIRVEAPAPMHMR- 226
Query: 190 PEGLEVQKGSVLSKVPLL 207
GLE + +++ P L
Sbjct: 227 -AGLEACGMAAVAEAPAL 243
>Q2ND80_ERYLH (tr|Q2ND80) Pseudouridine synthase OS=Erythrobacter litoralis
(strain HTCC2594) GN=ELI_01345 PE=3 SV=1
Length = 399
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
A + + YWALV+G P+ EG I APL+K G+ H E Q A T YR
Sbjct: 174 AGRSAKKVYWALVVGVPDLHEGEIDAPLAKQPGTGGEK------MHVDEENGQPAKTRYR 227
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N WVEL P+T R HQLRVH A A+G PIVGD KYG
Sbjct: 228 VVERAGNRACWVELEPMTGRTHQLRVHMA-AMGHPIVGDGKYG 269
>H8FNW9_RHOMO (tr|H8FNW9) Pseudouridine synthase OS=Phaeospirillum molischianum
DSM 120 GN=PHAMO_180026 PE=3 SV=1
Length = 331
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 99/229 (43%), Gaps = 58/229 (25%)
Query: 34 EQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLN 93
++ + ++ G SV TA+ LA + + YWALV G P ++G I APL K+
Sbjct: 145 DKDTSGVLLLGRSVGATAK--LAALFKSRSAQKCYWALVAGVPKLRQGRIDAPLGKL--- 199
Query: 94 DGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGT 153
GK M E + AVT YR++ + +W+E+ P T R HQLR HC LGT
Sbjct: 200 GGKGVEKMGVDE---EDGRHAVTYYRIVDSALKRAAWLEMEPRTGRTHQLRAHCL-LLGT 255
Query: 154 PIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRE 213
PI+GD KYG GK + EG + + LHLH R
Sbjct: 256 PILGDGKYG-------------------GKDAMI---EGFGLSR--------KLHLHARA 285
Query: 214 LALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
L LP HP ++ L VA +P+H + ++L
Sbjct: 286 LRLP----------------HPRTGKR---LEVVAPLPAHFKTGFDLFG 315
>F3SAS2_9PROT (tr|F3SAS2) Pseudouridine synthase OS=Gluconacetobacter sp. SXCC-1
GN=SXCC_03152 PE=3 SV=1
Length = 322
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 78/172 (45%), Gaps = 39/172 (22%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ GII PL++ L G ++A + A++EY VL
Sbjct: 172 YWAVVVGRPSPATGIIDQPLTR--LGAGAGAISVVAERGDADA-VHALSEYEVLDAAARK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC EALG PI+GD KYG D+ G R
Sbjct: 229 MSWLALSPLTGRTHQLRVHC-EALGNPILGDPKYGG------------DVAHVAGFADR- 274
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLRE 239
LHLH R L LP+ + V E +L P +RE
Sbjct: 275 -------------------LHLHARRLELPHPAGGTLVVEA---DLPPHMRE 304
>F3X0E4_9SPHN (tr|F3X0E4) Pseudouridine synthase OS=Sphingomonas sp. S17
GN=SUS17_2903 PE=3 SV=1
Length = 363
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P+ ++G I P++K G+ H E Q A + YRV+ N
Sbjct: 179 YWALVVGVPSIEDGTIELPIAKQPGTGGEK------MHVDEENGQAARSRYRVIERAGNR 232
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
C WVEL+P T R HQLRVH A A+G PIVGD KYG
Sbjct: 233 CCWVELQPFTGRTHQLRVHMA-AIGHPIVGDGKYG 266
>K2MYI4_9RHIZ (tr|K2MYI4) Pseudouridine synthase OS=Nitratireductor indicus C115
GN=NA8A_21411 PE=3 SV=1
Length = 328
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 61/221 (27%)
Query: 47 VTLTAQNLLAWNDACEA--TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAH 104
V T Q + +A A T + YWALV G P + EG I L K DG +R+ +A
Sbjct: 154 VARTRQAAVKLTEAFRARDTKKTYWALVKGVPKKPEGRISTWLVKEQTPDG--DRMRVAK 211
Query: 105 HSTIEPRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
H EP + AV+ YR++ SW+E+ P T R HQLRVH A +G PI+GD KY +
Sbjct: 212 HG--EPDSDHAVSNYRLIEQAATNLSWLEMEPYTGRTHQLRVHAAH-IGCPIIGDPKY-F 267
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
W+ P GL+ + LHLH R + +P+
Sbjct: 268 EADQNWE------------------FPGGLQKR----------LHLHARRIVIPH----- 294
Query: 224 HVFEKSPEELHPSLREQPDVLRF--VATMPSHMRISWNLMS 262
PD R A +P HMR SWNL+
Sbjct: 295 -----------------PDGGRIDVTAPLPPHMRQSWNLLG 318
>G2I1W0_GLUXN (tr|G2I1W0) Pseudouridine synthase OS=Gluconacetobacter xylinus
(strain NBRC 3288 / BCRC 11682 / LMG 1693) GN=rluC PE=3
SV=1
Length = 325
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 75/172 (43%), Gaps = 39/172 (22%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ GII PL+K L G ++A + A++EY VL
Sbjct: 175 YWAVVVGRPSPATGIIDQPLTK--LGAGAGAISVVAERGDPDA-VHALSEYEVLDAAARK 231
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC EALG PI+GD KYG
Sbjct: 232 MSWLALSPLTGRTHQLRVHC-EALGNPILGDPKYGG------------------------ 266
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLRE 239
V LHLH R L LP+ + V E +L P +RE
Sbjct: 267 --------DAAHVAGFADRLHLHARRLELPHPAGGTLVVEA---DLSPHMRE 307
>J2GEH1_9SPHN (tr|J2GEH1) Pseudouridine synthase OS=Novosphingobium sp. AP12
GN=PMI02_05386 PE=3 SV=1
Length = 453
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P+ EG+I PL+K G+ H + Q A T YRV+ N
Sbjct: 192 YWALVVGVPDIHEGLIELPLAKQPGTGGEK------MHVDEKEGQTARTRYRVIDRAGNR 245
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
+WVEL PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 246 AAWVELHPLTGRTHQLRVHMA-AIGHPIVGDGKYGG 280
>D8JXU8_HYPDA (tr|D8JXU8) Pseudouridine synthase OS=Hyphomicrobium denitrificans
(strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)
GN=Hden_1495 PE=3 SV=1
Length = 327
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 83/202 (41%), Gaps = 53/202 (26%)
Query: 61 CEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRV 120
+ + YWALV G P +G + A L K DG +RV A + A T Y V
Sbjct: 171 TRSAAKTYWALVKGVPKPPQGKVEAALVKASGPDG--DRVRKARPGEQDAAMHATTHYSV 228
Query: 121 LGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPT 180
+ + +WV L+P+T R+HQLR H +G PIVGD KY VH MP +IE
Sbjct: 229 VDRAAHKAAWVSLKPVTGRQHQLRAHM-HLIGHPIVGDNKYEGDVH-----MPAENIEKK 282
Query: 181 TGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQ 240
LHLH R L +P HP +
Sbjct: 283 --------------------------LHLHARRLVIP----------------HPKGGKT 300
Query: 241 PDVLRFVATMPSHMRISWNLMS 262
DV A +P+HM SW+L+
Sbjct: 301 IDV---TAPLPAHMLASWDLLG 319
>K4HJ60_BARQI (tr|K4HJ60) Pseudouridine synthase OS=Bartonella quintana RM-11
GN=RM11_0754 PE=3 SV=1
Length = 327
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 94/214 (43%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K + G RV H E
Sbjct: 160 AAQTLTAAFRARE-TKKTYWALVRGVPKKKQDKISTWVVKDITAQGDKMRV--CEHG--E 214
Query: 110 PRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F +
Sbjct: 215 PDSNHAVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMDNPIIGDSKY-FFSDSN 272
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
WK P G++ + LHLH R + +P
Sbjct: 273 WKL------------------PRGIQNR----------LHLHARRIRIP----------- 293
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L VA +P HM S+NL++
Sbjct: 294 -----HPS----GGILDIVAPLPPHMVQSFNLLA 318
>I3TNV3_TISMK (tr|I3TNV3) Ribosomal large subunit pseudouridine synthase C
OS=Tistrella mobilis (strain KA081020-065) GN=rluC PE=4
SV=1
Length = 326
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVL-- 121
T + YWA+ +G P G+I PL+K + G V + Q AVTEY VL
Sbjct: 177 TTKIYWAVTLGVPRPARGVIDLPLAKRQVERGGERMVAVDEGDG----QTAVTEYEVLAA 232
Query: 122 -GPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW-FVHNRWKQMPR 174
GP C+ V L+PLT R HQ+R H A A+GTPIVGD KYG V R + +PR
Sbjct: 233 GGP----CALVALKPLTGRTHQIRAHLA-AIGTPIVGDLKYGGQAVDLRGQGLPR 282
>M5F8G2_9RHIZ (tr|M5F8G2) Pseudouridine synthase OS=Mesorhizobium sp. STM 4661
GN=MESS4_580035 PE=4 SV=1
Length = 326
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 95/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K +DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTSDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YRV+ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAAHGE-KGADHAVSYYRVIEQAAQTMTWLEMEPYTGRTHQLRVHAAH-IGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIVIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>I9WEI4_9SPHN (tr|I9WEI4) Pseudouridine synthase OS=Novosphingobium sp. Rr 2-17
GN=WSK_2661 PE=3 SV=1
Length = 442
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P +G+I P++K G+ H E Q A T YRV+ N
Sbjct: 180 YWALVVGVPGIHDGMIELPIAKQPGTGGEK------MHVDKEAGQVARTRYRVIDRAGNS 233
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
+WVEL PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 234 AAWVELHPLTGRTHQLRVHMA-AIGHPIVGDGKYGG 268
>D5QCH7_GLUHA (tr|D5QCH7) Pseudouridine synthase OS=Gluconacetobacter hansenii
ATCC 23769 GN=GXY_04150 PE=3 SV=1
Length = 325
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+ +G P GI+ PL+++ G +M+ + A++EY VL
Sbjct: 175 YWAVTVGRPTPASGIVDQPLTRLGAGAGA---IMVVAGRRDKDAVHALSEYEVLDAAGRK 231
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
SW+ L PLT R HQLRVHC EALGTPI+GD KYG
Sbjct: 232 LSWLALSPLTGRTHQLRVHC-EALGTPILGDPKYG 265
>G7ZFW2_AZOL4 (tr|G7ZFW2) Pseudouridine synthase OS=Azospirillum lipoferum
(strain 4B) GN=AZOLI_p40161 PE=3 SV=1
Length = 235
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPR---QEAVTEYRVLGPK 124
YWA+ G P+ + G+I PL K + E TI P Q AVTEYRVLG
Sbjct: 96 YWAVADGIPDAESGVIDLPLLK------RIEPGASRSSWTILPDPAGQPAVTEYRVLGTG 149
Query: 125 INGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+G SW+ELRP T R HQ+RVHCA A+G P+VG+ YG
Sbjct: 150 ADGRSWLELRPRTGRTHQIRVHCA-AIGCPLVGEPFYG 186
>Q5FQE0_GLUOX (tr|Q5FQE0) Pseudouridine synthase OS=Gluconobacter oxydans (strain
621H) GN=GOX1665 PE=3 SV=1
Length = 335
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ + GII PL+K+ +++A E A TEY L
Sbjct: 172 YWAVVVGRPSPESGIIDQPLAKIGAGGAA---LVIAASRDEEDAASAKTEYETLDAAGKK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW++L PLT R HQLRVH E++GTPI+GD +YG +
Sbjct: 229 LSWLKLSPLTGRTHQLRVHT-ESIGTPILGDPRYGG----------------------KA 265
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
PEG + LHLH R+L +P+ + + L P +RE L FV
Sbjct: 266 AHPEGF----------IDRLHLHARQLDIPHPAGGRLIVTAP---LPPHMRETFRTLGFV 312
Query: 248 -ATMPSHMRISWNLMS 262
P+ R+ S
Sbjct: 313 PGETPAPKRVRGGSSS 328
>Q0G6Y2_9RHIZ (tr|Q0G6Y2) Pseudouridine synthase OS=Fulvimarina pelagi HTCC2506
GN=FP2506_07071 PE=3 SV=1
Length = 328
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 91/200 (45%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWA+V G P +KEG I L K DG +R+ +A H E A++ YRV+
Sbjct: 175 TKKLYWAVVKGVPAKKEGRISTYLKKEQTPDG--DRMRIARHGD-EGADHALSHYRVIDQ 231
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHN-RWKQMPRVDIEPTTG 182
+W+EL P T R HQLRVH A +G PI+GD KY F H+ W+
Sbjct: 232 VAQNFAWLELEPHTGRTHQLRVHAAH-IGHPILGDPKY--FEHDTNWE------------ 276
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++++ LHLH R L +P HPS
Sbjct: 277 ------FPGGVQMR----------LHLHARRLVIP----------------HPS----GG 300
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ +A +P HMR ++NL
Sbjct: 301 MIDQIAPLPQHMRQTFNLFG 320
>J8VB27_9SPHN (tr|J8VB27) Pseudouridine synthase OS=Sphingomonas sp. LH128
GN=LH128_25975 PE=3 SV=1
Length = 426
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P+ +G+I PL+K G+ H + Q A T YRV+ N
Sbjct: 179 YWALVVGVPSINDGMIELPLAKQPGTGGEK------MHVDEKEGQTARTRYRVIDRAGNR 232
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
+WVEL PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 233 AAWVELHPLTGRTHQLRVHMA-AIGHPIVGDGKYGG 267
>F7VAX9_9PROT (tr|F7VAX9) Pseudouridine synthase OS=Acetobacter tropicalis NBRC
101654 GN=ATPR_0528 PE=3 SV=1
Length = 327
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL++ L G +M+A E Q A + Y V+
Sbjct: 175 YWAVVVGRPDPLAGEIDQPLAR--LGAGANA-IMVAADRKDEDAQYARSTYEVVDAAARK 231
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC E+LGTPI+GD KYG + VD
Sbjct: 232 FSWLALSPLTGRTHQLRVHC-ESLGTPILGDPKYGGATAH-------VD----------- 272
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
G + Q LHLH REL +P+ + V EL P +RE L F
Sbjct: 273 ----GFKDQ----------LHLHARELDMPHPAGGRLVVTA---ELPPHMRETFRALGFT 315
>M9M9I1_GLUTH (tr|M9M9I1) Ribosomal large subunit pseudouridine synthase C
OS=Gluconobacter thailandicus NBRC 3255 GN=NBRC3255_1073
PE=4 SV=1
Length = 330
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P + GII PL+K+ +++A E A +EY +
Sbjct: 172 YWAIVVGRPAQASGIIDQPLAKIGAG---GAALVVAASRGEEDAVSAKSEYETIDAAGKK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC E+LGTPIVGD +YG +
Sbjct: 229 FSWLALSPLTGRTHQLRVHC-ESLGTPIVGDPRYGG----------------------KA 265
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
PEG + LHLH R+L +P+ + + L P +RE L FV
Sbjct: 266 AHPEGF----------IDRLHLHARQLDIPHPAGGRLIVTAP---LPPHMRETFRSLGFV 312
Query: 248 -ATMPSHMRISWN 259
P+ RI N
Sbjct: 313 PGDTPAPKRIKGN 325
>K7SSU6_GLUOY (tr|K7SSU6) Pseudouridine synthase OS=Gluconobacter oxydans H24
GN=B932_0369 PE=3 SV=1
Length = 330
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P + GII PL+K+ +++A E A +EY +
Sbjct: 172 YWAIVVGRPAQASGIIDQPLAKIGAG---GAALVVAASRGEEDAVSAKSEYETIDAAGKK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+ L PLT R HQLRVHC E+LGTPIVGD +YG +
Sbjct: 229 FSWLALSPLTGRTHQLRVHC-ESLGTPIVGDPRYGG----------------------KA 265
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
PEG + LHLH R+L +P+ + + L P +RE L FV
Sbjct: 266 AHPEGF----------IDRLHLHARQLDIPHPAGGRLIVTAP---LPPHMRETFRSLGFV 312
Query: 248 -ATMPSHMRISWN 259
P+ RI N
Sbjct: 313 PGDTPAPKRIKGN 325
>I5BUQ9_9RHIZ (tr|I5BUQ9) Pseudouridine synthase OS=Nitratireductor aquibiodomus
RA22 GN=A33O_16120 PE=3 SV=1
Length = 328
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 95/219 (43%), Gaps = 57/219 (26%)
Query: 47 VTLTAQNLLAWNDACEA--TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAH 104
V T Q + +A A T + YWALV G PN E I L+K DG +R+ +
Sbjct: 154 VARTRQAAMRLAEAFRARDTKKTYWALVKGVPNRDEARISTWLAKEQTPDG--DRMRVVK 211
Query: 105 HSTIEPRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
H EP + AV+ YRV+ + SW+E+ P T R HQLRVH A +G PI+GD KY +
Sbjct: 212 HG--EPDSDHAVSNYRVVERAGSALSWLEMEPYTGRTHQLRVHAA-YIGCPIIGDPKY-F 267
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
W+ P G++ + LHLH R + +P
Sbjct: 268 EADQNWE------------------FPGGIQKR----------LHLHARRIVIP------ 293
Query: 224 HVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HP + + A +P HMR SWNL+
Sbjct: 294 ----------HPGGGK----IDVTAPLPPHMRQSWNLLG 318
>F1ZBM1_9SPHN (tr|F1ZBM1) Pseudouridine synthase OS=Novosphingobium
nitrogenifigens DSM 19370 GN=Y88_3224 PE=3 SV=1
Length = 436
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P +G I PL+K G E++M+ Q A T YRV+ N
Sbjct: 183 YWALVMGIPEINDGYIDLPLAKQPGTGG--EKMMVDESGEG---QTARTRYRVIDRAGNR 237
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+WVEL+PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 238 AAWVELQPLTGRTHQLRVHMA-AIGHPIVGDGKYG 271
>D2VTC2_NAEGR (tr|D2VTC2) Predicted protein OS=Naegleria gruberi
GN=NAEGRDRAFT_52086 PE=3 SV=1
Length = 624
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+ +G P G I + + + E+V+ + T + + +V+EY+ + +
Sbjct: 498 YWAVTVGVPTPTTGRIKMVID-IQKDANGVEKVVPVDNKT-DSSKISVSEYKTIDHMTDK 555
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFV 165
+WV L P+T RKHQLRVHCA ALG PI+GDYKYG V
Sbjct: 556 LAWVALYPVTGRKHQLRVHCASALGAPILGDYKYGEGV 593
>Q1GRB1_SPHAL (tr|Q1GRB1) Pseudouridine synthase OS=Sphingopyxis alaskensis
(strain DSM 13593 / LMG 18877 / RB2256) GN=Sala_2102
PE=3 SV=1
Length = 405
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ +G I PL+K + G+ M H S + + T YRV+ N
Sbjct: 180 YWAIVVGVPDIAQGEIDLPLAKQPGSGGEK---MHVHDSGLASK----TRYRVIDRAGNS 232
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+WVEL+PLT R HQLRVH A A+G PIVGD KYG
Sbjct: 233 AAWVELQPLTGRTHQLRVHMA-AIGHPIVGDGKYG 266
>A9DCN2_9RHIZ (tr|A9DCN2) Pseudouridine synthase OS=Hoeflea phototrophica DFL-43
GN=HPDFL43_06807 PE=3 SV=1
Length = 329
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 89/200 (44%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++EG I L K +DG +R+ +A H EP + AV+ YR++
Sbjct: 173 TKKTYWALVTGVPRDREGKISTWLVKEATDDG--DRMRVAKHG--EPGADHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
W+EL P T R HQLRVHC LG PI+GD KY + H++ ++ P
Sbjct: 229 KAAQNLCWLELEPYTGRTHQLRVHCLH-LGHPILGDPKY--YDHDKNREFP--------- 276
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
G + + LHL R +++P HP
Sbjct: 277 ---------------GGMQKR---LHLLARHISVP----------------HPDGGR--- 299
Query: 243 VLRFVATMPSHMRISWNLMS 262
L A +P HM SWNL+
Sbjct: 300 -LSVTAPLPPHMVQSWNLLG 318
>H1UQ66_ACEPA (tr|H1UQ66) Pseudouridine synthase OS=Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471 GN=APS_1399
PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7JBV6_ACEP3 (tr|C7JBV6) Pseudouridine synthase OS=Acetobacter pasteurianus
(strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=APA01_17220
PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7L3T3_ACEPA (tr|C7L3T3) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-12 GN=APA12_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7KU06_ACEPA (tr|C7KU06) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-01-42C GN=APA42C_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7KJP4_ACEPA (tr|C7KJP4) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-32 GN=APA32_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7KHV5_ACEPA (tr|C7KHV5) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-26 GN=APA26_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7K8N6_ACEPA (tr|C7K8N6) Pseudouridine synthase OS=Acetobacter pasteurianus
GN=APA22_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7JYE2_ACEPA (tr|C7JYE2) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-07 GN=APA07_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>C7JP76_ACEPA (tr|C7JP76) Pseudouridine synthase OS=Acetobacter pasteurianus IFO
3283-03 GN=APA03_17220 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>H1UGA7_ACEPA (tr|H1UGA7) Pseudouridine synthase OS=Acetobacter pasteurianus NBRC
101655 GN=APT_1178 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQSARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>H0HVD7_9RHIZ (tr|H0HVD7) Pseudouridine synthase OS=Mesorhizobium alhagi
CCNWXJ12-2 GN=MAXJ12_20720 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 93/222 (41%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEATYQR-----YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA R YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLAEAFRGRDAKKTYWALVKGVPKKREDKISTWLIKEPTPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YR+L SW+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAQHGE-KGADHAVSYYRILEQAGQTMSWLEMEPHTGRTHQLRVHAAH-IGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGVQNR----------LHLHARRIRIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>L0KM91_MESAW (tr|L0KM91) Pseudouridine synthase OS=Mesorhizobium australicum
(strain LMG 24608 / HAMBI 3006 / WSM2073) GN=Mesau_04214
PE=3 SV=1
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEATPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YR++ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RIAAHGE-KGADHAVSYYRIIEQAAQTMTWLEMEPYTGRTHQLRVHAAH-IGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIIIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>I3KRM5_ORENI (tr|I3KRM5) Uncharacterized protein (Fragment) OS=Oreochromis
niloticus GN=LOC100709233 PE=4 SV=1
Length = 368
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 38/174 (21%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKV------------------LLNDGKTERVMLAHHST 107
++YW + +G P EG+I P+ + L N+G + +H
Sbjct: 185 RKYWVITVGVPVPSEGLIDIPIIEREVTGPQPHYKMALSPLYRLNNEGDGVTKVRSHRQA 244
Query: 108 IEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHN 167
AVT+YRVL +GCS VEL+P T KHQLRVH A ALG PI+GD+KY +
Sbjct: 245 ----HPAVTKYRVLDSS-SGCSLVELQPFTGVKHQLRVHMAFALGCPILGDHKY-----S 294
Query: 168 RWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISK 221
W ++ + P R+ G+E K + +P LHLH R+L LP S+
Sbjct: 295 HWSKLAPQKL------PERVLGKLGIEQSK---VRHLP-LHLHARQLTLPGSSQ 338
>K9HF45_9PROT (tr|K9HF45) Pseudouridine synthase OS=Caenispirillum salinarum AK4
GN=C882_1803 PE=3 SV=1
Length = 235
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 29 SYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLS 88
++ L LI +S L L E TY WA+V G P +++G++HA L
Sbjct: 56 AHRLDRDTSGCLILGRHSKALRKLGKLFQQGRVEKTY---WAVVDGAPPKEQGVLHAKLR 112
Query: 89 KVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGC-SWVELRPLTSRKHQLRVHC 147
K+ G V A Q AVTEYRVLG +G +W+E +P T R HQ+RVHC
Sbjct: 113 KLTPKSGWKMVVDEAEG------QPAVTEYRVLGRSDDGRRTWLECKPKTGRTHQIRVHC 166
Query: 148 AEALGTPIVGDYKYG 162
A LG PIVGD YG
Sbjct: 167 AH-LGCPIVGDAVYG 180
>G6YI54_9RHIZ (tr|G6YI54) Pseudouridine synthase OS=Mesorhizobium amorphae
CCNWGS0123 GN=MEA186_28372 PE=3 SV=1
Length = 326
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 94/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YRV+ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAAHGE-KGADHAVSYYRVIEQAAQTMTWLEMEPYTGRTHQLRVHAAH-IGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIVIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>F0J1V0_ACIMA (tr|F0J1V0) Pseudouridine synthase OS=Acidiphilium multivorum
(strain DSM 11245 / JCM 8867 / AIU301) GN=ACMV_01890
PE=3 SV=1
Length = 324
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P EG I PL+++ G R E +A+T+YR L
Sbjct: 174 YWAIVVGLPIPMEGQIDLPLARIGGAQGARTRPA---DRDDEDAAKAITDYRTLDHAGRK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
SW+EL PLT R HQLR HCA A+GTPI+GD YG
Sbjct: 231 FSWLELHPLTGRTHQLRAHCA-AIGTPILGDAPYG 264
>A5FUW0_ACICJ (tr|A5FUW0) Pseudouridine synthase OS=Acidiphilium cryptum (strain
JF-5) GN=Acry_0164 PE=3 SV=1
Length = 324
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P EG I PL+++ G R E +A+T+YR L
Sbjct: 174 YWAIVVGLPIPMEGQIDLPLARIGGAQGARTRPA---DRDDEDAAKAITDYRTLDHAGRK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
SW+EL PLT R HQLR HCA A+GTPI+GD YG
Sbjct: 231 FSWLELHPLTGRTHQLRAHCA-AIGTPILGDAPYG 264
>F7S6D1_9PROT (tr|F7S6D1) Pseudouridine synthase OS=Acidiphilium sp. PM
GN=APM_1882 PE=3 SV=1
Length = 324
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P EG I PL+++ G R E +A+T+YR L
Sbjct: 174 YWAIVVGLPIPMEGQIDLPLARIGGAQGARTRPA---DRDDEDAAKAITDYRTLDHAGRK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
SW+EL PLT R HQLR HCA A+GTPI+GD YG
Sbjct: 231 FSWLELHPLTGRTHQLRAHCA-AIGTPILGDAPYG 264
>M2ZU75_9PROT (tr|M2ZU75) Pseudouridine synthase OS=Magnetospirillum sp. SO-1
GN=H261_05944 PE=3 SV=1
Length = 335
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 61 CEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRV 120
A + YWALV G P +G I APL+K+ G E+V + E + AVT YRV
Sbjct: 174 SRAARKCYWALVAGVPRYPQGRIDAPLAKLPGKAG--EKVAVDK----EDGKHAVTYYRV 227
Query: 121 LGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWF--------------VH 166
+ + +W+E+ P T R HQLR HC LGTPI+GD KYG +H
Sbjct: 228 VDSTLKRAAWLEMEPRTGRTHQLRAHCL-LLGTPIMGDGKYGGAAALIEGTGVSRKLHLH 286
Query: 167 NRWKQMPRVDIEPTTGKPYRMRRP 190
R ++P P TGKP + P
Sbjct: 287 ARAVRLP----HPRTGKPIEISAP 306
>I3KRM6_ORENI (tr|I3KRM6) Uncharacterized protein OS=Oreochromis niloticus
GN=LOC100709233 PE=4 SV=1
Length = 387
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 38/174 (21%)
Query: 66 QRYWALVIGTPNEKEGIIHAPLSKV------------------LLNDGKTERVMLAHHST 107
++YW + +G P EG+I P+ + L N+G + +H
Sbjct: 204 RKYWVITVGVPVPSEGLIDIPIIEREVTGPQPHYKMALSPLYRLNNEGDGVTKVRSHRQA 263
Query: 108 IEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHN 167
AVT+YRVL +GCS VEL+P T KHQLRVH A ALG PI+GD+KY +
Sbjct: 264 ----HPAVTKYRVLDSS-SGCSLVELQPFTGVKHQLRVHMAFALGCPILGDHKY-----S 313
Query: 168 RWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISK 221
W ++ + P R+ G+E K + +P LHLH R+L LP S+
Sbjct: 314 HWSKLAPQKL------PERVLGKLGIEQSK---VRHLP-LHLHARQLTLPGSSQ 357
>N0B298_9RHIZ (tr|N0B298) Pseudouridine synthase OS=Hyphomicrobium denitrificans
1NES1 GN=HYPDE_29723 PE=4 SV=1
Length = 326
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 82/202 (40%), Gaps = 53/202 (26%)
Query: 61 CEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRV 120
+ + YWALV G P +G + A L K DG +RV A + A T Y V
Sbjct: 171 TRSAAKTYWALVKGVPKPPQGKVEAALVKASGPDG--DRVRKAKPGEQDVAMHATTHYSV 228
Query: 121 LGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPT 180
+ + +WV L+P+T R+HQLR H +G PIVGD KY VH MP +IE
Sbjct: 229 IDRAAHKAAWVSLKPVTGRQHQLRAHM-HLIGHPIVGDNKYEGDVH-----MPAENIEKK 282
Query: 181 TGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQ 240
LHLH R L +P HP +
Sbjct: 283 --------------------------LHLHARRLVIP----------------HP---KG 297
Query: 241 PDVLRFVATMPSHMRISWNLMS 262
++ A +P+HM SW L+
Sbjct: 298 GKIIDVTAPLPAHMAASWELLG 319
>K2LKW2_9RHIZ (tr|K2LKW2) Pseudouridine synthase OS=Nitratireductor pacificus
pht-3B GN=NA2_13470 PE=3 SV=1
Length = 328
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 95/221 (42%), Gaps = 61/221 (27%)
Query: 47 VTLTAQNLLAWNDACEA--TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAH 104
V T Q + +A A T + YWALV G P ++EG I L K DG +R+ +
Sbjct: 154 VARTRQAAMRLAEAFRARETKKTYWALVKGVPKQREGRISTWLVKEQTPDG--DRMRVTK 211
Query: 105 HSTIEPRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
H EP + AV+ YR++ SW+E+ P T R HQLRVH A +G PI+GD KY +
Sbjct: 212 HG--EPDSDHAVSNYRLIEQAGMTLSWLEMEPYTGRTHQLRVHAAH-IGCPIIGDPKY-F 267
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
W+ P GL+ + LHLH R + +P+
Sbjct: 268 EADQNWE------------------FPGGLQNR----------LHLHARRIVIPH----- 294
Query: 224 HVFEKSPEELHPSLREQPDVLRF--VATMPSHMRISWNLMS 262
PD R A +P HMR SWNL+
Sbjct: 295 -----------------PDQGRIDVTAPLPPHMRQSWNLLG 318
>F8JIE9_HYPSM (tr|F8JIE9) Pseudouridine synthase OS=Hyphomicrobium sp. (strain
MC1) GN=rluC PE=3 SV=1
Length = 331
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 85/215 (39%), Gaps = 53/215 (24%)
Query: 48 TLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHST 107
T A L + + YWALV G P +G + A L K DG +RV A
Sbjct: 163 TREAAAKLGRTFQTRSAAKTYWALVKGVPKPPQGKVEAALVKASGPDG--DRVRKAKPGE 220
Query: 108 IEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHN 167
+ A T Y V+ + +WV L+P+T R+HQLR H +G PIVGD KY VH
Sbjct: 221 QDVAMHATTHYSVIDRAAHKTAWVSLKPVTGRQHQLRAHM-HLIGHPIVGDNKYEGDVH- 278
Query: 168 RWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFE 227
MP +I+ LHLH R L +P
Sbjct: 279 ----MPAENIDKK--------------------------LHLHARRLVIP---------- 298
Query: 228 KSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HP + DV A +P HMR +W L+
Sbjct: 299 ------HPKGGKTIDV---TAPLPDHMRRTWELLG 324
>K5YQS6_9PROT (tr|K5YQS6) Pseudouridine synthase OS=Acidocella sp. MX-AZ02
GN=MXAZACID_01784 PE=3 SV=1
Length = 327
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWAL++G P+ EG I PL ++ L G+T R A E Q+A+T+YR+L
Sbjct: 174 YWALLVGLPDALEGRIDLPLKRIDL--GQTSRAEPASRKDKEA-QKAITDYRILDKAGRK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRW 169
EL P T R HQLR HC ALGTPI+GD YG H +
Sbjct: 231 FCLAELSPHTGRMHQLRAHCL-ALGTPILGDEVYGSAYHEHF 271
>M5ERW2_9RHIZ (tr|M5ERW2) Pseudouridine synthase OS=Mesorhizobium metallidurans
STM 2683 GN=MESS2_380032 PE=4 SV=1
Length = 326
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 94/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YRV+ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAAHGE-KGADHAVSYYRVIEQAAQTMTWLEMEPYTGRTHQLRVHAA-YIGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIVIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>K2ETA0_9BACT (tr|K2ETA0) Pseudouridine synthase OS=uncultured bacterium
GN=ACD_16C00232G0014 PE=3 SV=1
Length = 325
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV G P +KEG I LSK G+ RV E A T YR+L
Sbjct: 182 YWALVCGVPKKKEGSITLALSKKASVHGEKVRV------NTESGARATTYYRILETLGTK 235
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+ +EL P T R HQLRVHCAE L TPI+GD KYG
Sbjct: 236 MALLELTPKTGRMHQLRVHCAEGLKTPILGDGKYG 270
>Q0ANT2_MARMM (tr|Q0ANT2) Pseudouridine synthase OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1763 PE=3 SV=1
Length = 330
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 34 EQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLN 93
++ + ++ G TA+ A+ T + YWA+ IG P K G I + K +
Sbjct: 140 DKDTSGILIVGKGPKATARLAKAFQ--SHKTRKTYWAIAIGVPKPKMGEIKGFMRKAAAS 197
Query: 94 DGKTER-VMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALG 152
+ER M+A E Q A+T Y V+G SWV LRP+T R HQLRVH A A+G
Sbjct: 198 GVDSERETMVAAGHGDEGAQHALTRYVVIGEAGQKASWVALRPVTGRTHQLRVHLA-AMG 256
Query: 153 TPIVGDYKY 161
T I+GD KY
Sbjct: 257 TAILGDKKY 265
>Q6FZF3_BARQU (tr|Q6FZF3) Pseudouridine synthase OS=Bartonella quintana (strain
Toulouse) GN=rluC PE=3 SV=1
Length = 327
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 95/214 (44%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K + G +++ + H E
Sbjct: 160 AAQTLTAAFRARE-TKKTYWALVRGVPKKKQDKISTWVVKDITAQG--DKMCVCEHG--E 214
Query: 110 PRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F +
Sbjct: 215 PDSNHAVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMDNPIIGDSKY-FFSDSN 272
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
WK P G++ + LHLH R + +P
Sbjct: 273 WKL------------------PRGIQNR----------LHLHARRIRIP----------- 293
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L A +P HM S+NL++
Sbjct: 294 -----HPS----GGILDITAPLPPHMVQSFNLLA 318
>Q98N25_RHILO (tr|Q98N25) Pseudouridine synthase OS=Rhizobium loti (strain
MAFF303099) GN=mlr0334 PE=3 SV=1
Length = 326
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTEDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YR++ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAAHGE-KGADHAVSYYRIIEQAAQTMTWLEMEPYTGRTHQLRVHAA-YIGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIIIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K L + A MP HMR SWNL+
Sbjct: 297 KGL--------------------IDVTAPMPPHMRQSWNLIG 318
>K2L0I4_9PROT (tr|K2L0I4) Pseudouridine synthase OS=Thalassospira xiamenensis M-5
= DSM 17429 GN=TH3_16239 PE=3 SV=1
Length = 365
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 48 TLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHST 107
+ +A N L + T + YWA+V G P+E+EG+I APL+K + GK M+
Sbjct: 175 SASAANALTKAFKDKTTRKLYWAIVTGAPDEREGLIDAPLAK---HGGKGGEKMVIDEKE 231
Query: 108 IEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+ A T YR L +W+ L PLT R HQLR HC +A+ PI+GD KYG
Sbjct: 232 ---GKSAQTIYRQLARAGRRAAWLALSPLTGRTHQLRAHC-QAIECPILGDGKYG 282
>C6AE97_BARGA (tr|C6AE97) Pseudouridine synthase OS=Bartonella grahamii (strain
as4aup) GN=rluC PE=3 SV=1
Length = 327
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 94/218 (43%), Gaps = 64/218 (29%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVM-----LAH 104
AQ+L A A E T + YWALV G P +K+ I + K + G RV AH
Sbjct: 160 AAQSLTAAFRARE-TKKTYWALVRGVPKKKQDKISTWMVKEMTAQGDKMRVCEHGEPDAH 218
Query: 105 HSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWF 164
H AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F
Sbjct: 219 H--------AVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMDHPIIGDTKY-FF 268
Query: 165 VHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLH 224
+ W P G++ + LHLH R + +P
Sbjct: 269 SDSNWTL------------------PGGIQNR----------LHLHARRIRIP------- 293
Query: 225 VFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L VA +P HM S+NL+S
Sbjct: 294 ---------HPS----GGILDIVAPLPPHMVQSFNLLS 318
>E1BYI6_CHICK (tr|E1BYI6) Uncharacterized protein OS=Gallus gallus GN=RPUSD4 PE=3
SV=1
Length = 354
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 43/194 (22%)
Query: 68 YWALVIGTPNEKEGII-----------HAPLSKVLL--------NDGKTERVMLAHHSTI 108
YWA+ +G+P+ EGI+ H P K+ L DGK ++ ++
Sbjct: 174 YWAISVGSPDPAEGIVEIPMVEREVQSHQPHFKMTLAPNYRMSPEDGKVLKIRKNRNA-- 231
Query: 109 EPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
+ AVT+YRVL + CS +EL+P+T KHQLRVH A LG PI+GD+KY +
Sbjct: 232 ---ESAVTQYRVLASS-SACSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYSHWSKLA 287
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALP---NISKFLHV 225
+++P + + + L++Q+ S+ LHLH L+LP + SK + +
Sbjct: 288 PQKLPEITL-------------KRLKLQQSK--SRHLPLHLHAYRLSLPLGTSGSKRIDL 332
Query: 226 FEKSPEELHPSLRE 239
+ P H +LR+
Sbjct: 333 VCEPPSFFHRTLRK 346
>K7SC90_GLUOY (tr|K7SC90) Pseudouridine synthase OS=Gluconobacter oxydans H24
GN=B932_1382 PE=3 SV=1
Length = 243
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA-VTEYRVLGPKIN 126
YW +V GTP E EG I APL L + M+ ++P+ +A VT +RVLG + N
Sbjct: 112 YWTIVEGTPAENEGEISAPL---LRQSNPSGWRMI-----VDPKGDAAVTRWRVLG-RAN 162
Query: 127 GCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
G SW+EL LT R HQ R+HCA +LGTPIVGD YG
Sbjct: 163 GRSWLELELLTGRTHQARIHCA-SLGTPIVGDRVYG 197
>K2L815_9PROT (tr|K2L815) Pseudouridine synthase OS=Thalassospira profundimaris
WP0211 GN=TH2_19569 PE=3 SV=1
Length = 367
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 56 AWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV 115
A+ D ++T + YWA+V G P E+EG+I APL+K+ GK M+ + Q
Sbjct: 187 AFKD--KSTRKLYWAIVTGAPAEREGMIDAPLAKIA---GKGGEKMVIDEKLGKSAQSVF 241
Query: 116 TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW---FVHNRWKQM 172
+ G K +W+ L PLT R HQLRVHC EA+ PI+GD KYG F+ QM
Sbjct: 242 RQLHRAGRK---AAWLALSPLTGRTHQLRVHC-EAIECPILGDGKYGGPKAFIDGLSNQM 297
>F1YTQ1_9PROT (tr|F1YTQ1) Pseudouridine synthase OS=Acetobacter pomorum DM001
GN=rluC PE=3 SV=1
Length = 328
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ G I PL+++ G + +A Q A + Y VL
Sbjct: 174 YWAVVVGRPDPLSGEIDQPLARLGAGPGS---ITVAADRKDADAQFARSVYEVLDSAARK 230
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
SW+EL PLT R HQLRVHC E+LGTPI+GD KYG
Sbjct: 231 FSWLELSPLTGRTHQLRVHC-ESLGTPILGDPKYGG 265
>G6XJU4_9PROT (tr|G6XJU4) Pseudouridine synthase OS=Gluconobacter morbifer G707
GN=GMO_16730 PE=3 SV=1
Length = 221
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T++ YWA+V+G P E G I PL K +D R+++ + A T++RVLG
Sbjct: 85 THKLYWAVVVGNPPEDSGSITGPLLK--RSDRNGWRMVVDANG-----DNARTDWRVLGR 137
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
K +G W+EL LT R HQ R HCA ALGTPI+GD YG
Sbjct: 138 K-DGLCWLELDLLTGRTHQARAHCAAALGTPILGDPVYG 175
>J1JYE3_9RHIZ (tr|J1JYE3) Pseudouridine synthase OS=Bartonella melophagi K-2C
GN=ME3_00649 PE=3 SV=1
Length = 326
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 93/214 (43%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K G RV H E
Sbjct: 159 AAQALTAAFRARE-TKKTYWALVRGVPRKKQDKISTWMVKETTTQGDKMRV--CEHG--E 213
Query: 110 PRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F N
Sbjct: 214 PDSNHAVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMNHPIIGDSKY-FFSDNN 271
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
W+ P G++ + LHLH R + +P
Sbjct: 272 WEL------------------PGGIQNR----------LHLHARRIRIP----------- 292
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L +A +P HM S+NL++
Sbjct: 293 -----HPS----GGILDIIAPLPPHMVQSFNLLA 317
>F2IUX2_POLGS (tr|F2IUX2) Pseudouridine synthase OS=Polymorphum gilvum (strain
LMG 25793 / CGMCC 1.9160 / SL003B-26A1) GN=rluD PE=3
SV=1
Length = 334
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 93/222 (41%), Gaps = 60/222 (27%)
Query: 46 SVTLTAQNLLAWNDACEATYQR-----YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V L A+ A + A QR YWAL+ G P ++G I S L D +E++
Sbjct: 153 GVLLVAKTRKAAQELTRAFRQRSTRKIYWALLAGVPKPRQGRI----STYLARDEGSEKM 208
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H E Q AV+ Y V+ +WV LRP+T R HQLR H A +G PIVGD K
Sbjct: 209 KVARHGDDEA-QHAVSLYSVVEQSAQKLAWVSLRPVTGRTHQLRAHAAH-IGHPIVGDDK 266
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y F W+ P G++ + LHL R + +P
Sbjct: 267 Y--FNIENWEL------------------PGGIQNR----------LHLLARRIVIP--- 293
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS DV A +P HM+ SWNL+
Sbjct: 294 -------------HPSGHGTIDV---SAPLPPHMQQSWNLLG 319
>N7QGF4_BRUSS (tr|N7QGF4) RluA family pseudouridine synthase OS=Brucella suis
63/252 GN=C064_00301 PE=4 SV=1
Length = 326
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP E AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSEHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>M9MJP2_GLUTH (tr|M9MJP2) Ribosomal large subunit pseudouridine synthase A
OS=Gluconobacter thailandicus NBRC 3255 GN=NBRC3255_0175
PE=4 SV=1
Length = 243
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEA-VTEYRVLGPKIN 126
YW +V GTP E EG I APL L + M+ ++P+ +A VT +RVLG + N
Sbjct: 112 YWTVVEGTPAEDEGEISAPL---LRQSNPSGWRMI-----VDPKGDAAVTRWRVLG-RAN 162
Query: 127 GCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
G SW+EL LT R HQ R+HCA +LGTPIVGD YG
Sbjct: 163 GRSWLELELLTGRTHQARIHCA-SLGTPIVGDRVYG 197
>J0PZY9_9RHIZ (tr|J0PZY9) Pseudouridine synthase OS=Bartonella alsatica IBS 382
GN=MEC_00369 PE=3 SV=1
Length = 327
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 95/214 (44%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K ++ G RV H E
Sbjct: 160 AAQALTAAFRARE-TKKIYWALVRGVPKKKQDKISTWMVKEMVPQGDKMRV--CEHG--E 214
Query: 110 PRQ-EAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P A++ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F N
Sbjct: 215 PDSYHAISYYRVLDTRGRTLSWLEMEPYTGRTHQLRVHAAH-VDHPIIGDSKY-FFSDNN 272
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
WK P G++ + LHLH R + +P
Sbjct: 273 WKL------------------PGGIQNR----------LHLHARRIRIP----------- 293
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L VA +P HM S+NL++
Sbjct: 294 -----HPS----GGLLDIVAPLPPHMIQSFNLLA 318
>G9ZW07_9PROT (tr|G9ZW07) Pseudouridine synthase OS=Acetobacteraceae bacterium
AT-5844 GN=HMPREF9946_00725 PE=3 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 51 AQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEP 110
A + LA + YWA+V+G P + G I PL+K + ERV+ A
Sbjct: 158 AASFLAKAFRSRDAKKTYWAIVVGQPQYEAGRIDMPLAKQG-GGPQGERVVPAEGKE--- 213
Query: 111 RQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
AVTEY +W+EL PLT R HQLRVHCA AL TPI+GD KYG
Sbjct: 214 GAFAVTEYTTRDVARRHATWLELHPLTGRTHQLRVHCASALETPILGDGKYG 265
>E8TMF5_MESCW (tr|E8TMF5) Pseudouridine synthase OS=Mesorhizobium ciceri bv.
biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)
GN=Mesci_3657 PE=3 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 94/222 (42%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YRV+ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RVAAHGE-KGADHAVSYYRVIEQAAQTMTWLEMEPYTGRTHQLRVHAA-YIGCPILGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIIIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K V+ A MP HMR SWNL+
Sbjct: 297 K--------------------GVIDVTAPMPPHMRQSWNLIG 318
>D3P5C7_AZOS1 (tr|D3P5C7) Pseudouridine synthase OS=Azospirillum sp. (strain
B510) GN=rluC PE=3 SV=1
Length = 257
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVL-----LNDGKTERVMLAHHSTIEPRQEAVTEYRVLG 122
YWA+ G P G+I PL K + G++ +L + Q AVTEYRVLG
Sbjct: 102 YWAVADGVPEAGSGVIDLPLLKRIEPKSPSGAGRSSWTILPDPAG----QPAVTEYRVLG 157
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+G W+ELRP T R HQ+RVHCA A+G P+VG+ YG
Sbjct: 158 TAADGRCWLELRPRTGRTHQIRVHCA-AIGCPLVGEPFYG 196
>E6YZV3_BARSR (tr|E6YZV3) Pseudouridine synthase OS=Bartonella schoenbuchensis
(strain DSM 13525 / NCTC 13165 / R1) GN=rluC PE=3 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 93/214 (43%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K G RV H E
Sbjct: 159 AAQALTAAFRARE-TKKTYWALVRGVPRKKQDKISTWMVKETTAQGDKMRV--CEHG--E 213
Query: 110 PRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F N
Sbjct: 214 PDSNHAVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMDHPIIGDSKY-FFSDNN 271
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
W+ P G++ + LHLH R + +P
Sbjct: 272 WEL------------------PGGIQNR----------LHLHARRIRIP----------- 292
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L +A +P HM S+NL++
Sbjct: 293 -----HPS----GGILDIIAPLPPHMVQSFNLLA 317
>J7QGV9_METSZ (tr|J7QGV9) Pseudouridine synthase OS=Methylocystis sp. (strain
SC2) GN=BN69_1755 PE=3 SV=1
Length = 356
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 49/201 (24%)
Query: 68 YWALVIGTPNEKEGIIH------APLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVL 121
YWALV G P +G I A + K + E++ +A H + Q ++T Y ++
Sbjct: 184 YWALVEGVPKPAQGRISLYLAKGAGMEKSRGGARELEKMRVAKHGEADA-QHSLTYYAIV 242
Query: 122 GPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTT 181
C+W+ ++PLT R HQLR H AEA+G PI GD KYG H ++ R D
Sbjct: 243 DKVAPRCAWLSMKPLTGRTHQLRAH-AEAIGHPIFGDPKYG---HRPEDEVRRRD----- 293
Query: 182 GKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQP 241
P R PEGL+ + LHL R L LP HP +
Sbjct: 294 --PLRA-MPEGLDRK----------LHLLARRLVLP----------------HP----KG 320
Query: 242 DVLRFVATMPSHMRISWNLMS 262
V+ A +P HM+ SW L
Sbjct: 321 GVIDVTAPLPDHMKKSWELFG 341
>F7YDQ9_MESOW (tr|F7YDQ9) Pseudouridine synthase OS=Mesorhizobium opportunistum
(strain LMG 24607 / HAMBI 3007 / WSM2075) GN=Mesop_4589
PE=3 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 93/222 (41%), Gaps = 58/222 (26%)
Query: 46 SVTLTAQNLLAWNDACEA-----TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERV 100
V + A+ LA EA T + YWALV G P ++E I L K DG +RV
Sbjct: 150 GVLVVARTRLAAMKLSEAFRARETKKTYWALVKGVPPKREDKISTWLIKEPTPDG--DRV 207
Query: 101 MLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYK 160
+A H + AV+ YR++ +W+E+ P T R HQLRVH A +G PI+GD K
Sbjct: 208 RIAAHGE-KGADHAVSYYRIIEQAAQTMTWLEMEPYTGRTHQLRVHAA-YIGCPIIGDPK 265
Query: 161 YGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNIS 220
Y E T + P G++ + LHLH R + +P+
Sbjct: 266 Y---------------FEADTNWDF----PGGIQNR----------LHLHARRIVIPHPD 296
Query: 221 KFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
K + A MP HMR SWNL+
Sbjct: 297 KGF--------------------IDVTAPMPPHMRQSWNLIG 318
>N6VLC0_9RHIZ (tr|N6VLC0) Ribosomal large subunit pseudouridine synthase C
OS=Bartonella schoenbuchensis m07a GN=rluC PE=4 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 93/214 (43%), Gaps = 56/214 (26%)
Query: 50 TAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIE 109
AQ L A A E T + YWALV G P +K+ I + K G RV H E
Sbjct: 159 AAQALTAAFRARE-TKKTYWALVRGVPRKKQDKISTWMVKETTAQGDKMRV--CEHG--E 213
Query: 110 PRQE-AVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
P AV+ YRVL + SW+E+ P T R HQLRVH A + PI+GD KY +F N
Sbjct: 214 PDSNHAVSYYRVLDTRGRALSWLEMEPYTGRTHQLRVHAA-YMDHPIIGDSKY-FFSDNN 271
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEK 228
W+ P G++ + LHLH R + +P
Sbjct: 272 WEL------------------PGGIQNR----------LHLHARRIRIP----------- 292
Query: 229 SPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L +A +P HM S+NL++
Sbjct: 293 -----HPS----GGILDIIAPLPPHMVQSFNLLA 317
>G8SP86_BRUCA (tr|G8SP86) Pseudouridine synthase OS=Brucella canis HSK A52141
GN=BCA52141_I0133 PE=3 SV=1
Length = 331
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 178 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 233
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 234 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 279
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 280 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 303
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 304 IIDVTAPLPPHMVQSWNLLG 323
>K9HFR5_9PROT (tr|K9HFR5) Pseudouridine synthase OS=Caenispirillum salinarum AK4
GN=C882_0585 PE=3 SV=1
Length = 325
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P EG + APL+K GK M +P AVT +R +
Sbjct: 175 YWAVVVGAPKPSEGRLSAPLAKA---PGKAGERMEVDEDWGKP---AVTVFRTVEAVAGK 228
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+W+E+ PLT R HQLRVH A A+GTPI+GD KYG
Sbjct: 229 AAWLEMEPLTGRTHQLRVHAA-AMGTPILGDGKYG 262
>A9MB16_BRUC2 (tr|A9MB16) Pseudouridine synthase OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=BCAN_A1016 PE=3 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N9U452_BRUCA (tr|N9U452) RluA family pseudouridine synthase OS=Brucella canis
F7/05A GN=C982_00867 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N9SBG1_BRUCA (tr|N9SBG1) RluA family pseudouridine synthase OS=Brucella canis
CNGB 1324 GN=C967_00807 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8GMQ5_BRUSS (tr|N8GMQ5) RluA family pseudouridine synthase OS=Brucella suis
63/198 GN=C037_00904 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8BLF8_BRUCA (tr|N8BLF8) RluA family pseudouridine synthase OS=Brucella canis
CNGB 513 GN=C968_00887 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N7ZWJ1_BRUCA (tr|N7ZWJ1) RluA family pseudouridine synthase OS=Brucella canis
79/122 GN=B976_00442 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N7KUW6_BRUCA (tr|N7KUW6) RluA family pseudouridine synthase OS=Brucella canis
UK10/02 GN=C979_00440 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N7JIF1_BRUCA (tr|N7JIF1) RluA family pseudouridine synthase OS=Brucella canis
CNGB 1172 GN=C969_00910 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>D0PJ27_BRUSS (tr|D0PJ27) Pseudouridine synthase OS=Brucella suis bv. 3 str. 686
GN=BAFG_01823 PE=3 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>D0BBD6_BRUSS (tr|D0BBD6) Pseudouridine synthase OS=Brucella suis bv. 4 str. 40
GN=BAVG_0577 PE=3 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + V W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEVDQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>M2S9R0_9PROT (tr|M2S9R0) Pseudouridine synthase OS=alpha proteobacterium JLT2015
GN=C725_2406 PE=3 SV=1
Length = 395
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P +G I PL+K G+ H E Q A + YR + N
Sbjct: 181 YWAIVMGVPEIPDGRIDLPLAKQPGTGGEK------MHVDQEGGQRAASRYRRIDRAANR 234
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+W+EL+PLT R HQLRVH EA+G PIVGD KYG
Sbjct: 235 AAWLELQPLTGRTHQLRVHM-EAIGHPIVGDGKYG 268
>B7KQM4_METC4 (tr|B7KQM4) Pseudouridine synthase OS=Methylobacterium extorquens
(strain CM4 / NCIMB 13688) GN=Mchl_2949 PE=3 SV=1
Length = 239
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 94/230 (40%), Gaps = 49/230 (21%)
Query: 22 LTKRVVASYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEG 81
L +R A++ L L+ ++ L N L + + TY WALV G P EG
Sbjct: 59 LPRRPEAAHRLDRDTSGCLVLGRHAKALARLNRLFADGRVDKTY---WALVEGGPEAMEG 115
Query: 82 IIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKH 141
I PL+K +++ T ++T YRVLG + G SW+EL+P+T R H
Sbjct: 116 RIDLPLAK------RSDDPRSWWMKTDPAGAPSLTLYRVLG-QSEGLSWLELKPVTGRTH 168
Query: 142 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVL 201
QLRVHCA A+G PI GD Y GS
Sbjct: 169 QLRVHCA-AMGWPIRGDAIY------------------------------------GSAG 191
Query: 202 SKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMP 251
P L LH R L+LP K + ++P H +R D A+ P
Sbjct: 192 RDGPGLQLHARGLSLPLYPKREAIAVEAPAPAH--MRAGLDACGMTASAP 239
>N8G2A5_9RHIZ (tr|N8G2A5) RluA family pseudouridine synthase OS=Brucella sp.
63/311 GN=C038_00924 PE=4 SV=1
Length = 326
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A ++G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-SIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>Q5LW27_RUEPO (tr|Q5LW27) Pseudouridine synthase OS=Ruegeria pomeroyi (strain
ATCC 700808 / DSM 15171 / DSS-3) GN=rluC PE=3 SV=1
Length = 347
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 88/208 (42%), Gaps = 55/208 (26%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEA------- 114
T + YWALV G P G I L K + G+ E++ + H S ++ A
Sbjct: 171 TRKIYWALVAGVPTPYLGEIKTGLVKAGGHGARGEGEKMNVVHLSELDATPGAKRAHTYY 230
Query: 115 VTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPR 174
T YRV G SWV + P+T R HQLR H A +G PI+GD KYG
Sbjct: 231 ATLYRVAGR----ASWVAMEPVTGRTHQLRAHMA-GIGHPIIGDGKYGGSGQENLG---- 281
Query: 175 VDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELH 234
+G Q G ++SK LHLH R L+ FE H
Sbjct: 282 ----------------DGWGAQLGGIISKK--LHLHARSLS----------FE------H 307
Query: 235 PSLREQPDVLRFVATMPSHMRISWNLMS 262
PS R++ + F A +P HMR SW+
Sbjct: 308 PSTRKK---VTFTAPLPEHMRESWDTFG 332
>D6LPU2_9RHIZ (tr|D6LPU2) Pseudouridine synthase OS=Brucella sp. NVSL 07-0026
GN=BAZG_01336 PE=3 SV=1
Length = 331
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR+L
Sbjct: 178 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRILE 233
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 234 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 279
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 280 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 303
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ +A +P HM SWNL+
Sbjct: 304 IIDVMAPLPPHMVQSWNLLG 323
>N1MWV4_9SPHN (tr|N1MWV4) Ribosomal large subunit pseudouridine synthase C
OS=Sphingobium japonicum BiD32 GN=EBBID32_41130 PE=4
SV=1
Length = 464
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALVIG P+ +G+I PL+K G E++ + + R T YRV+ N
Sbjct: 280 YWALVIGVPSINDGMIELPLAKQPGTGG--EKMHVDEAEGLPAR----TRYRVIERAGNR 333
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+WVEL+P T R HQLRVH A A+G PIVGD KYG
Sbjct: 334 AAWVELQPYTGRTHQLRVHLA-AIGHPIVGDGKYG 367
>A1USS6_BARBK (tr|A1USS6) Pseudouridine synthase OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=BARBAKC583_0730 PE=3 SV=1
Length = 327
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 53/195 (27%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV G P +K+ I ++K G RV H ++ AV+ YR+L +
Sbjct: 177 YWALVRGVPRKKQEKISTWMAKETTAQGDKMRV--CEHGELDA-NHAVSYYRILDTRARA 233
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+E+ P T R HQLRVH + +G PI+GD KY +F + W+
Sbjct: 234 LSWLEMEPYTGRTHQLRVHASH-IGHPIIGDSKY-FFSDSNWEL---------------- 275
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
P G++ + LHLH R + +P HPS +L
Sbjct: 276 --PGGMQNR----------LHLHARRIRIP----------------HPS----GGILDIT 303
Query: 248 ATMPSHMRISWNLMS 262
A +P HM S+NL++
Sbjct: 304 APLPPHMVQSFNLLA 318
>K8Q0Q8_BARBA (tr|K8Q0Q8) Pseudouridine synthase OS=Bartonella bacilliformis INS
GN=BbINS_03447 PE=3 SV=1
Length = 327
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 53/195 (27%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV G P +K+ I ++K G RV H ++ AV+ YR+L +
Sbjct: 177 YWALVRGVPRKKQEKISTWMAKETTAQGDKMRV--CEHGELDA-NHAVSYYRILDTRARA 233
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
SW+E+ P T R HQLRVH + +G PI+GD KY +F + W+
Sbjct: 234 LSWLEMEPYTGRTHQLRVHASH-IGHPIIGDSKY-FFSDSNWEL---------------- 275
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFV 247
P G++ + LHLH R + +P HPS +L
Sbjct: 276 --PGGMQNR----------LHLHARRIRIP----------------HPS----GGILDIT 303
Query: 248 ATMPSHMRISWNLMS 262
A +P HM S+NL++
Sbjct: 304 APLPPHMVQSFNLLA 318
>J6DQG0_9RHIZ (tr|J6DQG0) Pseudouridine synthase OS=Rhizobium sp. CCGE 510
GN=RCCGE510_09105 PE=3 SV=1
Length = 329
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 84/199 (42%), Gaps = 53/199 (26%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWALV G P + E I L K DG +R+ +A H + A++ YRVL
Sbjct: 173 TKKTYWALVKGVPRKHEDKISTWLVKEPTADG--DRMRIARHGE-DGADHAISFYRVLET 229
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGK 183
+W+E+ P T R HQLRVH +G PI+GD KY D +P
Sbjct: 230 AAQNLAWLEMEPYTGRTHQLRVHALH-IGHPIIGDPKY-------------FDDDPNWDF 275
Query: 184 PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
P G V K LHLH R + +P HPS
Sbjct: 276 P-------------GGVQKK---LHLHARRIDIP----------------HPSGGR---- 299
Query: 244 LRFVATMPSHMRISWNLMS 262
LR A +PSHM +WNL+
Sbjct: 300 LRVSAPLPSHMVQTWNLLG 318
>I7EII9_PHAGD (tr|I7EII9) Pseudouridine synthase OS=Phaeobacter gallaeciensis
(strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC
16654 / BS107) GN=rluC PE=3 SV=1
Length = 343
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 49 LTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLN--DGKTERVMLAHHS 106
L AQ+L A AT + YWALV G P G I L K + G+ E+++ H +
Sbjct: 153 LAAQSLTAAF-RHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSN 211
Query: 107 TIEPRQEAV---TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
++ A T Y L + +WV + P+T R HQLR H AE +G PI GD KYG
Sbjct: 212 EVDSTPGAKRSHTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAE-IGHPIAGDGKYGG 270
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
+G Q G ++SK LHLHCR +A F
Sbjct: 271 SSQENLG--------------------DGWGAQLGGIISKK--LHLHCRRMA------FE 302
Query: 224 HVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWN 259
H K P L A +P HM+ SW+
Sbjct: 303 HPTTKKP-------------LSITAPLPDHMKDSWD 325
>I7DTR0_PHAG2 (tr|I7DTR0) Pseudouridine synthase OS=Phaeobacter gallaeciensis
(strain 2.10) GN=rluC PE=3 SV=1
Length = 348
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 49 LTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLN--DGKTERVMLAHHS 106
L AQ+L A AT + YWALV G P G I L K + G+ E+++ H +
Sbjct: 158 LAAQSLTAAF-RHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSN 216
Query: 107 TIEPRQEAV---TEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
++ A T Y L + +WV + P+T R HQLR H AE +G PI GD KYG
Sbjct: 217 EVDSTPGAKRSHTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAE-IGHPIAGDGKYGG 275
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
+G Q G ++SK LHLHCR +A F
Sbjct: 276 SSQENLG--------------------DGWGAQLGGIISKK--LHLHCRRMA------FE 307
Query: 224 HVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWN 259
H K P L A +P HM+ SW+
Sbjct: 308 HPTTKKP-------------LSITAPLPDHMKDSWD 330
>G1MQ83_MELGA (tr|G1MQ83) Uncharacterized protein (Fragment) OS=Meleagris
gallopavo GN=RPUSD4 PE=3 SV=2
Length = 321
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 43/194 (22%)
Query: 68 YWALVIGTPNEKEGII-----------HAPLSKVLL--------NDGKTERVMLAHHSTI 108
YWA+ +G+P+ EGI+ H P K+ L DGK ++ ++
Sbjct: 141 YWAISVGSPDPAEGIVEIPMVEREVQSHQPHYKMTLAPNYRMSPEDGKVLKIRKNRNA-- 198
Query: 109 EPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNR 168
+ AVT YRVL + CS +EL+P+T KHQLRVH A LG PI+GD+KY +
Sbjct: 199 ---ENAVTRYRVLATS-SACSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYSHWSKLA 254
Query: 169 WKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALP---NISKFLHV 225
+++P + + + L++Q+ S+ LHLH L+LP SK +
Sbjct: 255 PQKLPEITL-------------KRLKLQQSK--SRHLPLHLHAYRLSLPLGTGGSKQTDL 299
Query: 226 FEKSPEELHPSLRE 239
+ P H +LR+
Sbjct: 300 VCEPPSFFHRTLRQ 313
>B7QX41_9RHOB (tr|B7QX41) Pseudouridine synthase OS=Ruegeria sp. R11 GN=RR11_2818
PE=3 SV=1
Length = 348
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 85/202 (42%), Gaps = 47/202 (23%)
Query: 63 ATYQRYWALVIGTPNEKEGIIHAPLSKVLLN--DGKTERVMLAHHSTIEPRQEAV---TE 117
AT + YWALV G P G I L K + G+ E+++ H + ++ A T+
Sbjct: 171 ATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTQ 230
Query: 118 YRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDI 177
Y L + +WV + P+T R HQLR H AE +G PI GD KYG
Sbjct: 231 YATLYRVASRAAWVAMEPITGRTHQLRAHMAE-IGHPIAGDGKYGGSGQENLG------- 282
Query: 178 EPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSL 237
+G Q G ++SK LHLHCR +A F H K P
Sbjct: 283 -------------DGWGAQLGGIISKK--LHLHCRRMA------FEHPTTKKP------- 314
Query: 238 REQPDVLRFVATMPSHMRISWN 259
L A +P HM+ SW+
Sbjct: 315 ------LSITAPLPEHMKESWD 330
>J1JEP4_9RHIZ (tr|J1JEP4) Pseudouridine synthase OS=Bartonella rattimassiliensis
15908 GN=MCY_01458 PE=3 SV=1
Length = 327
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 95/213 (44%), Gaps = 56/213 (26%)
Query: 51 AQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEP 110
AQ L A A E T + YWALV G P +K+ I + K + G +++ + H EP
Sbjct: 161 AQALTAAFRARE-TKKTYWALVRGVPKKKQDKISTWMVKEITTQG--DKMHVCEHG--EP 215
Query: 111 -RQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRW 169
AV+ YR+L + SW+E+ P T R HQLRVH A + PI+GD KY +F + W
Sbjct: 216 DSHHAVSYYRILDTRGRTLSWLEMEPYTGRTHQLRVHAAH-MDHPIIGDTKY-FFSDSNW 273
Query: 170 KQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKS 229
P G++ + LHLH R + +P
Sbjct: 274 TL------------------PGGIQNR----------LHLHARRIRIP------------ 293
Query: 230 PEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
HPS +L VA +P HM S+NL+S
Sbjct: 294 ----HPS----GGILDIVAPLPPHMVQSFNLLS 318
>Q1MG68_RHIL3 (tr|Q1MG68) Pseudouridine synthase OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=rluC PE=3 SV=1
Length = 330
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 84/199 (42%), Gaps = 53/199 (26%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWALV G P + E I L K DG +R+ +A H + A++ YRVL
Sbjct: 174 TKKTYWALVKGVPRKHEDKISTWLVKEPTADG--DRMRIAKHGE-DGADHAISFYRVLET 230
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGK 183
+W+E+ P T R HQLRVH +G PI+GD KY D +P
Sbjct: 231 AAQNLAWLEMEPYTGRTHQLRVHALH-IGHPIIGDPKY-------------FDDDPNWDF 276
Query: 184 PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
P G V K LHLH R + +P HPS
Sbjct: 277 P-------------GGVQKK---LHLHARHIDIP----------------HPSGGR---- 300
Query: 244 LRFVATMPSHMRISWNLMS 262
LR A +PSHM +WNL+
Sbjct: 301 LRVSAPLPSHMVQTWNLLG 319
>D5QKZ5_METTR (tr|D5QKZ5) Pseudouridine synthase OS=Methylosinus trichosporium
OB3b GN=MettrDRAFT_0471 PE=3 SV=1
Length = 365
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 40 LIFNGYSVTLTAQNLLAWNDACEATYQR-----YWALVIGTPNEKEGIIHAPLSK-VLLN 93
L + V L A+N D E R YWALV G P +G + L+K +
Sbjct: 151 LDRDTSGVLLIAKNRRTAADLGEIFRSRQAKKIYWALVEGVPKPAQGRVSLYLAKGAAMG 210
Query: 94 DGK--------------TERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSR 139
D + E++ +A H E Q ++T Y ++ C+W+ ++PLT R
Sbjct: 211 DDRPPRPGSERREAADAREKMRVARHGD-EGAQHSLTYYAIVEKAAPRCAWLSMKPLTGR 269
Query: 140 KHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGS 199
HQLR H AEA+ PI GD KYG H ++ R D P R PEGLE +
Sbjct: 270 THQLRAH-AEAIACPIFGDPKYG---HRPEDEVRRRD-------PMRA-MPEGLERK--- 314
Query: 200 VLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWN 259
LHL R L LPN + L A +P+HM+ SW+
Sbjct: 315 -------LHLLARRLILPN--------------------PKGGTLDVTAPLPAHMQTSWD 347
Query: 260 LMS 262
+
Sbjct: 348 VFG 350
>E8RTG1_ASTEC (tr|E8RTG1) Pseudouridine synthase OS=Asticcacaulis excentricus
(strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)
GN=Astex_3147 PE=3 SV=1
Length = 335
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAV-TEYRVLG 122
Y+ YWALV GTP+ KEG+I PL K +ND R M+ EP EA TEY +
Sbjct: 173 AYKTYWALVAGTPDPKEGVIDVPLVKKGIND----REMVMPADPKEPGAEAAETEYVTIS 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKY 161
+ +W+ LRP T R HQLR H +A+G I+GD KY
Sbjct: 229 RAAHRLAWMALRPHTGRTHQLRAHM-QAIGHCILGDPKY 266
>M2X6B1_GALSU (tr|M2X6B1) Ribosomal large subunit pseudouridine synthase C
OS=Galdieria sulphuraria GN=Gasu_08000 PE=4 SV=1
Length = 358
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 60/219 (27%)
Query: 49 LTAQNLLAWNDACEATYQR-----YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLA 103
L A+N +A + QR YWALVIG P +G I + DGKT
Sbjct: 192 LLARNSVAAKNLALLFQQRQVKKLYWALVIGNPLPTQGEIRKAV------DGKT------ 239
Query: 104 HHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 163
A+T YRV+ + +W+EL P+T RK QLR+HCA+ L PI GD K
Sbjct: 240 ----------AITRYRVVEKLHSVAAWLELEPITGRKRQLRLHCAQVLNCPIFGDEK--- 286
Query: 164 FVHNRWKQMPRVDIEPTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFL 223
F +R ++ + G + +RRP+G +HLH ++ PNI
Sbjct: 287 FPFDRLEE--NTHLVAYQGLSHLLRRPKG--------------IHLHAYSISFPNIETL- 329
Query: 224 HVFEKSPEELHPSLREQPDVLRFVATMPSHMRISWNLMS 262
P++ ++ A +P HM +WN +
Sbjct: 330 ----DKPQKTWKTV---------TAPLPLHMENTWNTLG 355
>F8ES98_ZYMMT (tr|F8ES98) Pseudouridine synthase OS=Zymomonas mobilis subsp.
pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 /
NCIMB 11200 / NRRL B-4491) GN=Zymop_0772 PE=3 SV=1
Length = 370
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+ ++ YWALV+G P+ +EG+I PL++ + G+ V + +T A T YR
Sbjct: 171 SGRTAHKVYWALVVGVPSIEEGLIDLPLARQPGSGGEKMHVDEENGAT------AKTLYR 224
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
++ N W+EL+PLT R HQLR H + A+G PIVGD KYG
Sbjct: 225 IVERAGNAACWLELQPLTGRTHQLRAHLS-AIGFPIVGDGKYG 266
>Q5NQE2_ZYMMO (tr|Q5NQE2) Pseudouridine synthase OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=ZMO0439 PE=3
SV=1
Length = 374
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+ ++ YWALV+G P+ EG+I PL++ + G+ V + +T A T YR
Sbjct: 171 SGRTAHKVYWALVVGVPSITEGLIDLPLARQPGSGGEKMHVDEENGAT------AKTLYR 224
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N W+EL+PLT R HQLR H + A+G PIVGD KYG
Sbjct: 225 VIERAGNAACWLELQPLTGRTHQLRAHLS-AIGFPIVGDGKYG 266
>F8DT78_ZYMMA (tr|F8DT78) Pseudouridine synthase OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB
8938 / NRRL B-806 / ZM1) GN=Zmob_0973 PE=3 SV=1
Length = 374
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+ ++ YWALV+G P+ EG+I PL++ + G+ V + +T A T YR
Sbjct: 171 SGRTAHKVYWALVVGVPSITEGLIDLPLARQPGSGGEKMHVDEENGAT------AKTLYR 224
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N W+EL+PLT R HQLR H + A+G PIVGD KYG
Sbjct: 225 VIERAGNAACWLELQPLTGRTHQLRAHLS-AIGFPIVGDGKYG 266
>C8WCB9_ZYMMN (tr|C8WCB9) Pseudouridine synthase OS=Zymomonas mobilis subsp.
mobilis (strain NCIB 11163) GN=Za10_0808 PE=3 SV=1
Length = 374
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+ ++ YWALV+G P+ EG+I PL++ + G+ V + +T A T YR
Sbjct: 171 SGRTAHKVYWALVVGVPSITEGLIDLPLARQPGSGGEKMHVDEENGAT------AKTLYR 224
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N W+EL+PLT R HQLR H + A+G PIVGD KYG
Sbjct: 225 VIERAGNAACWLELQPLTGRTHQLRAHLS-AIGFPIVGDGKYG 266
>I6YQY2_ZYMMB (tr|I6YQY2) Pseudouridine synthase OS=Zymomonas mobilis subsp.
mobilis ATCC 29191 GN=ZZ6_0819 PE=3 SV=1
Length = 374
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 60 ACEATYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYR 119
+ ++ YWALV+G P+ EG+I PL++ + G+ V + +T A T YR
Sbjct: 171 SGRTAHKVYWALVVGVPSITEGLIDLPLARQPGSGGEKMHVDEENGAT------AKTLYR 224
Query: 120 VLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
V+ N W+EL+PLT R HQLR H + A+G PIVGD KYG
Sbjct: 225 VIERAGNAACWLELQPLTGRTHQLRAHLS-AIGFPIVGDGKYG 266
>B7RL95_9RHOB (tr|B7RL95) Pseudouridine synthase OS=Roseobacter sp. GAI101
GN=rluC PE=3 SV=1
Length = 349
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 80/201 (39%), Gaps = 47/201 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAH---HSTIEPRQEAVTEY 118
T + YWA V G P+ K G I L K + G+ E++ H T E + A T+Y
Sbjct: 172 TRKIYWAAVAGVPHPKNGTIKFGLVKAFGHGARGEGEKMYCVHPKDMDTTEGAKRATTDY 231
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L WV L P+T R HQLR H AE +G PIVGD KYG
Sbjct: 232 ATLAQAGTRTCWVALIPVTGRTHQLRAHMAE-IGHPIVGDGKYGGSGQENMG-------- 282
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +SK LHLH R L L HP +
Sbjct: 283 ------------DGWGAQLGGDISKK--LHLHARSLTLE----------------HPVTK 312
Query: 239 EQPDVLRFVATMPSHMRISWN 259
L +A MP HM +W+
Sbjct: 313 A---TLNLIAPMPDHMVRTWD 330
>F2HQT0_BRUMM (tr|F2HQT0) Pseudouridine synthase OS=Brucella melitensis (strain
M28) GN=BM28_A1009 PE=3 SV=1
Length = 331
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 178 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 233
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 234 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 279
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 280 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 303
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 304 IIDVTAPLPPHMVQSWNLLG 323
>F2GUX0_BRUM5 (tr|F2GUX0) Pseudouridine synthase OS=Brucella melitensis (strain
M5-90) GN=BM590_A1001 PE=3 SV=1
Length = 331
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 178 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 233
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 234 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 279
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 280 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 303
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 304 IIDVTAPLPPHMVQSWNLLG 323
>G4PJD4_BRUML (tr|G4PJD4) Pseudouridine synthase OS=Brucella melitensis NI
GN=BMNI_I0977 PE=3 SV=1
Length = 331
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 178 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 233
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 234 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 279
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 280 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 303
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 304 IIDVTAPLPPHMVQSWNLLG 323
>C6AYR2_RHILS (tr|C6AYR2) Pseudouridine synthase OS=Rhizobium leguminosarum bv.
trifolii (strain WSM1325) GN=Rleg_2086 PE=3 SV=1
Length = 330
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 85/203 (41%), Gaps = 53/203 (26%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGP 123
T + YWALV G P + E I L K DG +R+ +A H + A++ YRVL
Sbjct: 174 TKKTYWALVKGVPRKHEDKISTWLVKEPTADG--DRMRIAKHGE-DGADHAISFYRVLET 230
Query: 124 KINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGK 183
+W+E+ P T R HQLRVH +G PI+GD KY D +P
Sbjct: 231 AAQNLAWLEMEPYTGRTHQLRVHALH-IGHPIIGDPKY-------------FDDDPNWDF 276
Query: 184 PYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPDV 243
P G V K LHLH R + +P HPS
Sbjct: 277 P-------------GGVQKK---LHLHARHIDIP----------------HPSGGR---- 300
Query: 244 LRFVATMPSHMRISWNLMSSYLV 266
LR A +P+HM +WNL+ L
Sbjct: 301 LRISAPLPAHMVQTWNLLGLDLA 323
>A7HWU2_PARL1 (tr|A7HWU2) Pseudouridine synthase OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=Plav_2767
PE=3 SV=1
Length = 330
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 82/197 (41%), Gaps = 59/197 (29%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWALV+G P ++G I LSK + ERV A E ++AVT + + +
Sbjct: 176 YWALVVGVPVPRQGTIDLALSK--QGGPRAERVFAAKRGD-EGARDAVTHFSTVSTAAHT 232
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTGKPYRM 187
+WV PLT R HQ+R H A A+ TPIVGD KYG + ++PR
Sbjct: 233 LAWVAFMPLTGRTHQIRAHAA-AIETPIVGDGKYGGVNAHPGGEIPR------------- 278
Query: 188 RRPEGLEVQKGSVLSKVPLLHLHCR--ELALPNISKFLHVFEKSPEELHPSLREQPDVLR 245
LHLH R ++A P+ + LHV
Sbjct: 279 ------------------KLHLHARSIDIAHPDGGR-LHV-------------------- 299
Query: 246 FVATMPSHMRISWNLMS 262
A +P HM+ SW L+
Sbjct: 300 -EADLPPHMKTSWKLLG 315
>Q3J5P2_RHOS4 (tr|Q3J5P2) Pseudouridine synthase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=RHOS4_03240 PE=3 SV=1
Length = 346
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEAV---TEY 118
T + YWALV G P+ K+G I L K + G+ E+++ H + + EA T++
Sbjct: 171 TRKIYWALVAGVPSPKQGSIKYALMKAPGHGRGGEGEKMLCIHPAKVGDYPEAKRAQTDF 230
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L + C+W+ L P+T R HQLR H AE LG PIVGD KYG
Sbjct: 231 FTLWFLGSRCAWMALSPITGRTHQLRAHMAE-LGHPIVGDGKYGGSGQENLG-------- 281
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +S+ LHLH R L + HP +
Sbjct: 282 ------------DGWGAQIGGEMSRK--LHLHARSLTIE----------------HPIKK 311
Query: 239 EQPDVLRFVATMPSHMRISWNLMS 262
D++ F A +P HM +W L+
Sbjct: 312 ---DLVTFTAPLPGHMAKTWKLLD 332
>F5M4H2_RHOSH (tr|F5M4H2) Pseudouridine synthase OS=Rhodobacter sphaeroides WS8N
GN=RSWS8N_13955 PE=3 SV=1
Length = 346
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEAV---TEY 118
T + YWALV G P+ K+G I L K + G+ E+++ H + + EA T++
Sbjct: 171 TRKIYWALVAGVPSPKQGSIKYALMKAPGHGRGGEGEKMLCIHPAKVGDYPEAKRAQTDF 230
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L + C+W+ L P+T R HQLR H AE LG PIVGD KYG
Sbjct: 231 FTLWFLGSRCAWMALSPITGRTHQLRAHMAE-LGHPIVGDGKYGGSGQENLG-------- 281
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +S+ LHLH R L + HP +
Sbjct: 282 ------------DGWGAQIGGEMSRK--LHLHARSLTIE----------------HPIKK 311
Query: 239 EQPDVLRFVATMPSHMRISWNLMS 262
D++ F A +P HM +W L+
Sbjct: 312 ---DLVTFTAPLPGHMAKTWKLLD 332
>B9KLC1_RHOSK (tr|B9KLC1) Pseudouridine synthase OS=Rhodobacter sphaeroides
(strain KD131 / KCTC 12085) GN=RSKD131_0044 PE=3 SV=1
Length = 343
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEAV---TEY 118
T + YWALV G P+ K+G I L K + G+ E+++ H + + EA T++
Sbjct: 168 TRKIYWALVAGVPSPKQGSIKYALMKAPGHGRGGEGEKMLCIHPAKVGDYPEAKRAQTDF 227
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L + C+W+ L P+T R HQLR H AE LG PIVGD KYG
Sbjct: 228 FTLWFLGSRCAWMALSPITGRTHQLRAHMAE-LGHPIVGDGKYGGSGQENLG-------- 278
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +S+ LHLH R L + HP +
Sbjct: 279 ------------DGWGAQIGGEMSRK--LHLHARSLTIE----------------HPIKK 308
Query: 239 EQPDVLRFVATMPSHMRISWNLMS 262
D++ F A +P HM +W L+
Sbjct: 309 ---DLVTFTAPLPGHMAKTWKLLD 329
>L1KA22_9RHOB (tr|L1KA22) Pseudouridine synthase OS=Rhodobacter sp. AKP1
GN=D516_1133 PE=3 SV=1
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEAV---TEY 118
T + YWALV G P+ K+G I L K + G+ E+++ H + + EA T++
Sbjct: 174 TRKIYWALVAGVPSPKQGSIKYALMKAPGHGRGGEGEKMLCIHPAKVGDYPEAKRAQTDF 233
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L + C+W+ L P+T R HQLR H AE LG PIVGD KYG
Sbjct: 234 FTLWFLGSRCAWMALSPITGRTHQLRAHMAE-LGHPIVGDGKYGGSGQENLG-------- 284
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +S+ LHLH R L + HP +
Sbjct: 285 ------------DGWGAQIGGEMSRK--LHLHARSLTIE----------------HPIKK 314
Query: 239 EQPDVLRFVATMPSHMRISWNLMS 262
D++ F A +P HM +W L+
Sbjct: 315 ---DLVTFTAPLPGHMAKTWKLLD 335
>Q8YH21_BRUME (tr|Q8YH21) Pseudouridine synthase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=BMEI0983 PE=3
SV=1
Length = 343
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 190 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 245
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 246 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 291
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 292 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 315
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 316 IIDVTAPLPPHMVQSWNLLG 335
>C0G693_9RHIZ (tr|C0G693) Pseudouridine synthase OS=Brucella ceti str. Cudo
GN=BCETI_3000277 PE=3 SV=1
Length = 343
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 190 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 245
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 246 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 291
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 292 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 315
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 316 IIDVTAPLPPHMVQSWNLLG 335
>M5JSH3_9RHIZ (tr|M5JSH3) RluA family pseudouridine synthase OS=Ochrobactrum
intermedium M86 GN=D584_02280 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKDQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLTWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>D0PCV9_BRUSS (tr|D0PCV9) Pseudouridine synthase OS=Brucella suis bv. 5 str. 513
GN=BAEG_01291 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>C4WJL5_9RHIZ (tr|C4WJL5) Pseudouridine synthase OS=Ochrobactrum intermedium LMG
3301 GN=OINT_1001225 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKDQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLTWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>Q6I819_BRUSU (tr|Q6I819) Pseudouridine synthase OS=Brucella suis biovar 1
(strain 1330) GN=rluC PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8IGZ2_BRUSS (tr|N8IGZ2) RluA family pseudouridine synthase OS=Brucella suis
CNGB 247 GN=C966_00803 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8GMP8_BRUSS (tr|N8GMP8) RluA family pseudouridine synthase OS=Brucella suis
01-5744 GN=B985_00677 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N7RKQ2_BRUSS (tr|N7RKQ2) RluA family pseudouridine synthase OS=Brucella suis
CNGB 786 GN=C965_00806 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N7PQW0_BRUSS (tr|N7PQW0) RluA family pseudouridine synthase OS=Brucella suis
92/29 GN=C062_00803 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>G8NEH8_BRUSS (tr|G8NEH8) Pseudouridine synthase OS=Brucella suis VBI22 GN=rluC
PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>A3PGP1_RHOS1 (tr|A3PGP1) Pseudouridine synthase OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=Rsph17029_0391 PE=3
SV=1
Length = 346
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLND--GKTERVMLAHHSTIEPRQEAV---TEY 118
T + YWALV G P+ K+G I L K + G+ E+++ H + + EA T++
Sbjct: 171 TRKIYWALVAGVPSPKQGSIKYALMKAPGHGRGGEGEKMLCIHPAKVGDYPEAKRAQTDF 230
Query: 119 RVLGPKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIE 178
L + C+W+ L P+T R HQLR H AE LG PIVGD KYG
Sbjct: 231 FTLWFLGSRCAWMALSPITGRTHQLRAHMAE-LGHPIVGDGKYGGSGQENLG-------- 281
Query: 179 PTTGKPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLR 238
+G Q G +S+ LHLH R L + HP +
Sbjct: 282 ------------DGWGAQIGGEMSRK--LHLHARSLTIE----------------HPIKK 311
Query: 239 EQPDVLRFVATMPSHMRISWNLMS 262
D++ F A +P HM +W L+
Sbjct: 312 ---DLVTFTAPLPGHMAKTWKLLD 332
>G2IKM1_9SPHN (tr|G2IKM1) Pseudouridine synthase OS=Sphingobium sp. SYK-6
GN=SLG_04090 PE=3 SV=1
Length = 447
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 68 YWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKING 127
YWA+V+G P+ +G+I PL+K G+ H E A + YR++ N
Sbjct: 187 YWAIVMGVPDVADGVIDLPLAKQPGTGGEK------MHVDEENGMPARSRYRIIERAGNR 240
Query: 128 CSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 162
+WVEL+P T R HQLRVH A A+G PIVGD KYG
Sbjct: 241 AAWVELQPYTGRTHQLRVHMA-AIGHPIVGDGKYG 274
>E0DVT2_9RHIZ (tr|E0DVT2) Pseudouridine synthase OS=Brucella sp. NF 2653
GN=BROD_1174 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>E0DKJ8_9RHIZ (tr|E0DKJ8) Pseudouridine synthase OS=Brucella inopinata BO1
GN=BIBO1_0537 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>D1CXW6_9RHIZ (tr|D1CXW6) Pseudouridine synthase OS=Brucella sp. 83/13
GN=BAKG_00396 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8AT52_BRUML (tr|N8AT52) RluA family pseudouridine synthase OS=Brucella
melitensis F1/06 B10 GN=C036_01126 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>G7Z9X3_AZOL4 (tr|G7Z9X3) Pseudouridine synthase OS=Azospirillum lipoferum
(strain 4B) GN=AZOLI_p10018 PE=3 SV=1
Length = 226
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 29 SYYLGEQKIAYLIFNGYSVTLTAQNLLAWNDACEATYQRYWALVIGTPNEKEGIIHAPLS 88
++ L LI ++ L +L N + TY WA+V G P ++ G I PL+
Sbjct: 56 AHRLDRDTSGCLILGRHAKALRKIGILFQNGKVDKTY---WAVVAGAPPQESGRIELPLA 112
Query: 89 KVLLNDGKTERVMLAHHSTIEPRQEAVTEYRVLGPKINGCSWVELRPLTSRKHQLRVHCA 148
KV N R++ + Q AVT+Y V G + +G +W+EL P T R HQ+RVHCA
Sbjct: 113 KVS-NKTGGWRIVGSPDG-----QTAVTDYVVRG-QADGLTWLELTPHTGRTHQIRVHCA 165
Query: 149 EALGTPIVGDYKYGW------FVHNRWKQMP 173
++G P+VGD +YG +H+R +P
Sbjct: 166 -SIGCPLVGDPQYGGPEGKPLHLHSRAISLP 195
>C9TVA3_BRUPB (tr|C9TVA3) Pseudouridine synthase OS=Brucella pinnipedialis
(strain NCTC 12890 / BCCN 94-73 / B2/94) GN=rluC PE=3
SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>C7LBU6_BRUMC (tr|C7LBU6) Pseudouridine synthase OS=Brucella microti (strain CCM
4915) GN=rluC PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>C0RIX6_BRUMB (tr|C0RIX6) Pseudouridine synthase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=BMEA_A1041 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>B0CGF1_BRUSI (tr|B0CGF1) Pseudouridine synthase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=BSUIS_A1043 PE=3 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8PD03_BRUOV (tr|N8PD03) Uncharacterized protein OS=Brucella ovis
IntaBari-1993-758 GN=H719_00971 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8NPE9_BRUOV (tr|N8NPE9) Uncharacterized protein OS=Brucella ovis
IntaBari-2001-319-4082 GN=H717_01032 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8NIG1_BRUOV (tr|N8NIG1) Uncharacterized protein OS=Brucella ovis
IntaBari-2001-319-5096 GN=H716_00966 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8NE07_BRUOV (tr|N8NE07) Uncharacterized protein OS=Brucella ovis
IntaBari-2002-82-58 GN=H715_00957 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8MRK5_BRUOV (tr|N8MRK5) Uncharacterized protein OS=Brucella ovis
IntaBari-2006-46-332 GN=H721_00979 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8MPI7_BRUOV (tr|N8MPI7) Uncharacterized protein OS=Brucella ovis
IntaBari-2008-114-542 GN=H718_00954 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8M4U7_BRUOV (tr|N8M4U7) Uncharacterized protein OS=Brucella ovis
IntaBari-2006-46-348 GN=H720_00959 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8LIM8_BRUOV (tr|N8LIM8) Uncharacterized protein OS=Brucella ovis
IntaBari-2010-47-871 GN=H714_00848 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8L2T0_BRUOV (tr|N8L2T0) Uncharacterized protein OS=Brucella ovis
IntaBari-2010-47-268 GN=H713_00956 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8KWU8_BRUSS (tr|N8KWU8) RluA family pseudouridine synthase OS=Brucella suis
F9/06-1 GN=C008_00949 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8KPS0_BRUSS (tr|N8KPS0) RluA family pseudouridine synthase OS=Brucella suis
F8/06-3 GN=B968_01285 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8KC49_BRUML (tr|N8KC49) Uncharacterized protein OS=Brucella melitensis F15/06-7
GN=D628_00785 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8K6Z8_BRUSS (tr|N8K6Z8) RluA family pseudouridine synthase OS=Brucella suis
F7/06-5 GN=B987_01281 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8K6N1_BRUSS (tr|N8K6N1) RluA family pseudouridine synthase OS=Brucella suis
F8/06-1 GN=C007_00949 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8JUX3_BRUML (tr|N8JUX3) Uncharacterized protein OS=Brucella melitensis B115
GN=D627_00599 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8IS63_BRUSS (tr|N8IS63) RluA family pseudouridine synthase OS=Brucella suis
F12/02 GN=C049_00955 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8HPX1_BRUSS (tr|N8HPX1) RluA family pseudouridine synthase OS=Brucella suis
F5/05-10 GN=B986_01796 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8HCJ5_9RHIZ (tr|N8HCJ5) RluA family pseudouridine synthase OS=Brucella sp.
UK1/97 GN=C065_00910 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8GZQ7_9RHIZ (tr|N8GZQ7) RluA family pseudouridine synthase OS=Brucella sp.
F96/2 GN=B998_01265 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8GCP1_9RHIZ (tr|N8GCP1) RluA family pseudouridine synthase OS=Brucella sp.
F23/97 GN=C983_00914 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8G5D9_9RHIZ (tr|N8G5D9) RluA family pseudouridine synthase OS=Brucella sp.
UK40/99 GN=C051_00976 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8FN18_BRUOV (tr|N8FN18) RluA family pseudouridine synthase OS=Brucella ovis
81/8 GN=C009_00974 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8FKH7_9RHIZ (tr|N8FKH7) RluA family pseudouridine synthase OS=Brucella sp.
F8/99 GN=C067_00900 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8F6J9_BRUOV (tr|N8F6J9) RluA family pseudouridine synthase OS=Brucella ovis
63/96 GN=B999_01288 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8F4A3_9RHIZ (tr|N8F4A3) RluA family pseudouridine synthase OS=Brucella sp.
F5/06 GN=C001_01290 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8EPV9_BRUML (tr|N8EPV9) RluA family pseudouridine synthase OS=Brucella
melitensis UK31/99 GN=B984_00801 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8EFY3_9RHIZ (tr|N8EFY3) RluA family pseudouridine synthase OS=Brucella sp.
56/94 GN=B989_01262 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8ECK9_BRUML (tr|N8ECK9) RluA family pseudouridine synthase OS=Brucella
melitensis UK3/06 GN=B997_00792 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318
>N8DPH3_BRUML (tr|N8DPH3) RluA family pseudouridine synthase OS=Brucella
melitensis UK37/05 GN=C033_01169 PE=4 SV=1
Length = 326
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 64 TYQRYWALVIGTPNEKEGIIHAPLSKVLLNDGKTERVMLAHHSTIEPRQE-AVTEYRVLG 122
T + YWALV G P ++E I L K DG RV H EP + AV+ YR++
Sbjct: 173 TKKTYWALVKGVPRKREDKISTWLVKEQTPDGDKMRV--CQHG--EPDSDHAVSYYRIIE 228
Query: 123 PKINGCSWVELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDIEPTTG 182
N +W+E+ P T R HQLRVH A +G PI+GD KY + W+
Sbjct: 229 KAGNNLAWLEMEPYTGRTHQLRVHAA-YIGHPIIGDPKY-FEADQNWE------------ 274
Query: 183 KPYRMRRPEGLEVQKGSVLSKVPLLHLHCRELALPNISKFLHVFEKSPEELHPSLREQPD 242
P G++ + LHLH R + +PN S
Sbjct: 275 ------FPGGIQKR----------LHLHARRIRIPNPSG--------------------G 298
Query: 243 VLRFVATMPSHMRISWNLMS 262
++ A +P HM SWNL+
Sbjct: 299 IIDVTAPLPPHMVQSWNLLG 318