Miyakogusa Predicted Gene

Lj0g3v0313199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0313199.1 Non Chatacterized Hit- tr|B9SLI2|B9SLI2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.76,0.000000002,seg,NULL,CUFF.21145.1
         (282 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SLI2_RICCO (tr|B9SLI2) Putative uncharacterized protein OS=Ric...    68   3e-09

>B9SLI2_RICCO (tr|B9SLI2) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0591280 PE=4 SV=1
          Length = 335

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 8   VFFKDEKGGDFCYGCGMLDHTLRDCDEKQDD--WNEKDDEGMPFGVWLRASPLKPNLVL 64
           VFF+ E+   FCY CG L H +RDCD + +D  ++  D++ +PFG W+RASP K   V+
Sbjct: 62  VFFRYERLPSFCYVCGCLGHVMRDCDSRTEDDGYDAMDEKLLPFGDWMRASPFKRTKVI 120