Miyakogusa Predicted Gene

Lj0g3v0312999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312999.1 Non Chatacterized Hit- tr|I1M1F9|I1M1F9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.38,0.000000000000004, ,CUFF.21129.1
         (121 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1MF30_SOYBN (tr|I1MF30) Uncharacterized protein (Fragment) OS=G...    66   4e-09
G7IPV3_MEDTR (tr|G7IPV3) Pentatricopeptide repeat-containing pro...    59   6e-07
M5XBM9_PRUPE (tr|M5XBM9) Uncharacterized protein OS=Prunus persi...    57   2e-06

>I1MF30_SOYBN (tr|I1MF30) Uncharacterized protein (Fragment) OS=Glycine max PE=4
           SV=2
          Length = 544

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 35/49 (71%)

Query: 73  SQPNSVFDLFTKMCWSGLRASAATVLILLPAACDAGDFVVRKSLHGYCI 121
           SQP  VF LF KMCW GL AS ATVL LL AA   G+F V KSLHGYCI
Sbjct: 202 SQPCLVFGLFRKMCWVGLEASVATVLSLLSAAGYIGNFGVGKSLHGYCI 250


>G7IPV3_MEDTR (tr|G7IPV3) Pentatricopeptide repeat-containing protein OS=Medicago
           truncatula GN=MTR_2g019350 PE=4 SV=1
          Length = 801

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 32/44 (72%)

Query: 78  VFDLFTKMCWSGLRASAATVLILLPAACDAGDFVVRKSLHGYCI 121
           VFDLF K   SG+RAS AT L LL AA D G FV+ KSLHGYCI
Sbjct: 195 VFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCI 238


>M5XBM9_PRUPE (tr|M5XBM9) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa003920mg PE=4 SV=1
          Length = 540

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 32/49 (65%)

Query: 73  SQPNSVFDLFTKMCWSGLRASAATVLILLPAACDAGDFVVRKSLHGYCI 121
           SQP  + DLF +MC SG  AS  TVL LL A  D G ++  +SLHGYCI
Sbjct: 155 SQPQVIVDLFKQMCRSGFEASVTTVLNLLSAIGDLGSYLGGESLHGYCI 203