Miyakogusa Predicted Gene

Lj0g3v0311169.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311169.1 Non Chatacterized Hit- tr|B9SBE6|B9SBE6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,65.22,2e-16,seg,NULL,CUFF.20994.1
         (97 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1KHU0_SOYBN (tr|I1KHU0) Uncharacterized protein OS=Glycine max ...    69   7e-10
B9SBE6_RICCO (tr|B9SBE6) Putative uncharacterized protein OS=Ric...    68   1e-09
B9GR35_POPTR (tr|B9GR35) Predicted protein (Fragment) OS=Populus...    63   4e-08
H9VR21_PINTA (tr|H9VR21) Uncharacterized protein (Fragment) OS=P...    60   3e-07
H9MD90_PINRA (tr|H9MD90) Uncharacterized protein (Fragment) OS=P...    60   3e-07
J3N3V1_ORYBR (tr|J3N3V1) Uncharacterized protein OS=Oryza brachy...    56   3e-06

>I1KHU0_SOYBN (tr|I1KHU0) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 90

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 2/38 (5%)

Query: 16 CGGSIMSCDKLDRMANWVGANMASAFFASLERCSCINL 53
          CG   MSCDKLDR+ANWVGAN+ASAFFASLERCSCINL
Sbjct: 22 CG--FMSCDKLDRVANWVGANVASAFFASLERCSCINL 57


>B9SBE6_RICCO (tr|B9SBE6) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_0716650 PE=4 SV=1
          Length = 88

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 19 SIMSCDKLDRMANWVGANMASAFFASLERCSCINLXXXXXXXXXXXXXXXXXRALMLTNP 78
          S++SCDKLDR+A+WVG+N+ASAFFASLERCSCINL                 R LML+ P
Sbjct: 10 SLISCDKLDRVASWVGSNVASAFFASLERCSCINL---NTADPEDDDEEAKDRPLMLSKP 66

Query: 79 V 79
           
Sbjct: 67 T 67


>B9GR35_POPTR (tr|B9GR35) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_409917 PE=4 SV=1
          Length = 72

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 32/34 (94%)

Query: 20 IMSCDKLDRMANWVGANMASAFFASLERCSCINL 53
           MSC+KLDR+A+WVG N+ASAFFASLERCSCINL
Sbjct: 20 FMSCEKLDRVASWVGVNVASAFFASLERCSCINL 53


>H9VR21_PINTA (tr|H9VR21) Uncharacterized protein (Fragment) OS=Pinus taeda
          GN=CL3702Contig1_01 PE=4 SV=1
          Length = 95

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 31/35 (88%)

Query: 19 SIMSCDKLDRMANWVGANMASAFFASLERCSCINL 53
          + + C KLDR+A WVGA++ASAFFASLERCSCINL
Sbjct: 15 TTLGCRKLDRLAGWVGASVASAFFASLERCSCINL 49


>H9MD90_PINRA (tr|H9MD90) Uncharacterized protein (Fragment) OS=Pinus radiata
          GN=CL3702Contig1_01 PE=4 SV=1
          Length = 95

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 31/35 (88%)

Query: 19 SIMSCDKLDRMANWVGANMASAFFASLERCSCINL 53
          + + C KLDR+A WVGA++ASAFFASLERCSCINL
Sbjct: 15 TTLGCRKLDRLAGWVGASVASAFFASLERCSCINL 49


>J3N3V1_ORYBR (tr|J3N3V1) Uncharacterized protein OS=Oryza brachyantha
          GN=OB10G21990 PE=4 SV=1
          Length = 90

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%)

Query: 20 IMSCDKLDRMANWVGANMASAFFASLERCSCINLXXXXXXXXXXXXXXXXXRALMLTNP 78
          I+S +KL+  A WVGA++ASAFFAS+ERC+CI+L                 R LML+ P
Sbjct: 12 ILSYEKLEGYAIWVGASVASAFFASMERCACIHLHTADDDGDDYDPEEAKDRPLMLSRP 70