Miyakogusa Predicted Gene

Lj0g3v0309239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309239.1 Non Chatacterized Hit- tr|I3T5K7|I3T5K7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,94.29,2e-29,seg,NULL,CUFF.20901.1
         (124 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T5K7_LOTJA (tr|I3T5K7) Uncharacterized protein OS=Lotus japoni...   103   1e-20

>I3T5K7_LOTJA (tr|I3T5K7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 132

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 54/70 (77%)

Query: 44  HEPPPSTKAPTMATPNSHEHASTTATAGHHRHASFHERTTMSSPIFKAEAIXXXXXXXXX 103
           HEPPP TKAPTMATPNSHEHASTTATAGHHRHASFHERT  SSPIFKAE I         
Sbjct: 44  HEPPPYTKAPTMATPNSHEHASTTATAGHHRHASFHERTITSSPIFKAEVIFPQSFPFSC 103

Query: 104 XXXLTQRTNK 113
              LTQRTNK
Sbjct: 104 FSPLTQRTNK 113