Miyakogusa Predicted Gene

Lj0g3v0300109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300109.1 Non Chatacterized Hit- tr|I3T814|I3T814_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,58.49,0.0000000001,
,gene.Ljchr0_pseudomol_20120828.path1.gene30829.1
         (68 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T814_LOTJA (tr|I3T814) Uncharacterized protein OS=Lotus japoni...    71   1e-10
K7MDV1_SOYBN (tr|K7MDV1) Uncharacterized protein OS=Glycine max ...    62   7e-08
G7J9B2_MEDTR (tr|G7J9B2) Histone deacetylase OS=Medicago truncat...    57   2e-06

>I3T814_LOTJA (tr|I3T814) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 219

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 14 SLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEEDRVAA 66
          SL     +KLDDSNF SW+Q VEG +R+H+L  FL  PEIP R+L+E+DRV A
Sbjct: 32 SLVHKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRWLSEDDRVNA 84


>K7MDV1_SOYBN (tr|K7MDV1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 323

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 14 SLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEEDRVAAT 67
          + S+T   KLD+ N+ +W QQV   +R+HQL  ++V+P +P ++L+EED  A T
Sbjct: 7  TFSQTVACKLDEKNYMNWHQQVNAVLRAHQLEKYVVNPVVPLKYLSEEDHAAGT 60


>G7J9B2_MEDTR (tr|G7J9B2) Histone deacetylase OS=Medicago truncatula
           GN=MTR_3g118540 PE=4 SV=1
          Length = 1775

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query: 13  ESLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEEDRVAAT 67
           ++  +  +IKLDD+N+  W+QQVEG +R  ++  F++ PEIP  +LT+  R A T
Sbjct: 468 KTFKQVVSIKLDDTNYLQWKQQVEGVLRGTKMVKFVISPEIPPVYLTDAAREAGT 522