Miyakogusa Predicted Gene

Lj0g3v0297949.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0297949.2 tr|G7L2Z5|G7L2Z5_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_7g116580 PE=4
SV=1,50.52,3e-19,seg,NULL,CUFF.20000.2
         (183 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7L2Z5_MEDTR (tr|G7L2Z5) F-box/LRR-repeat protein OS=Medicago tr...    99   5e-19
A2Q3H0_MEDTR (tr|A2Q3H0) Cyclin-like F-box OS=Medicago truncatul...    84   2e-14
G7L2W3_MEDTR (tr|G7L2W3) Putative uncharacterized protein OS=Med...    72   6e-11

>G7L2Z5_MEDTR (tr|G7L2Z5) F-box/LRR-repeat protein OS=Medicago truncatula
           GN=MTR_7g116580 PE=4 SV=1
          Length = 488

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 6/97 (6%)

Query: 93  PEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNFYEIEIAMNALKYFHKLERIILSP---- 148
           P+     + IRDV+TFSH E+KVIELG CVGN+YEIE  MN LKY HKLE+I++SP    
Sbjct: 392 PKLFDNQKDIRDVETFSHDEVKVIELGGCVGNWYEIEFVMNVLKYAHKLEQIVVSPFWRE 451

Query: 149 --SKCWKHDRTWPQNGRERILAKLQSEGIGLDKLVLI 183
             S  WK +  W Q GRE++  KL  + +  +KLV++
Sbjct: 452 DESLDWKSNPIWFQGGREKLSEKLSGQVVQGEKLVIV 488


>A2Q3H0_MEDTR (tr|A2Q3H0) Cyclin-like F-box OS=Medicago truncatula
           GN=MTR_7g114090 PE=4 SV=1
          Length = 473

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 9/115 (7%)

Query: 78  LVVPPPLLSDTKIK--RPEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNFYEIEIAMNAL 135
           ++   PLL    I    PEF    + IRDV+  SH +I+VIEL  CVGN+YEIE   N L
Sbjct: 359 MLQASPLLQKLSIMFLAPEFFENQKDIRDVEILSHDDIRVIELRGCVGNWYEIEFVKNVL 418

Query: 136 KYFHKLERIILSP------SKCWKHDRTWPQNGRERILAKLQSE-GIGLDKLVLI 183
           K  HKLE+I+LSP         W     W + GRER+  KL+ E  +G +KLV I
Sbjct: 419 KCAHKLEQIVLSPYWTEVDGFSWNSHPLWFKGGRERMGEKLKDEVVVGREKLVFI 473


>G7L2W3_MEDTR (tr|G7L2W3) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_7g116260 PE=4 SV=1
          Length = 133

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 67  DCCDLLFQETPLVVPPPLLS-DTKIKRPEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNF 125
           D C LL+    L   P L         P F+     I DV  FSH E+KVIE G CVGN+
Sbjct: 36  DECSLLWILNILQASPLLQKLSVMFAHPRFHENQNDIMDVGVFSHNEVKVIEFGGCVGNW 95

Query: 126 YEIEIAMNALKYFHKLERIILS 147
           +EIE  MN +KY HKLE+I+++
Sbjct: 96  FEIEFVMNVIKYAHKLEKIVMT 117