Miyakogusa Predicted Gene

Lj0g3v0287739.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287739.3 tr|G7KPS9|G7KPS9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,71.11,0.0000000008, ,CUFF.19230.3
         (77 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7KPS9_MEDTR (tr|G7KPS9) Pentatricopeptide repeat-containing pro...    68   1e-09
K7M8H4_SOYBN (tr|K7M8H4) Uncharacterized protein OS=Glycine max ...    67   3e-09
M5X5C4_PRUPE (tr|M5X5C4) Uncharacterized protein OS=Prunus persi...    60   2e-07

>G7KPS9_MEDTR (tr|G7KPS9) Pentatricopeptide repeat-containing protein
          OS=Medicago truncatula GN=MTR_6g069480 PE=4 SV=1
          Length = 895

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/45 (73%), Positives = 35/45 (77%)

Query: 33 QQQVVDALCSGERKKASDLLLDFGYRSRSLKADDFVGILNYCARS 77
          Q Q+V AL SGERKKAS LLLDFG+RS SL ADDFV I  YCA S
Sbjct: 21 QLQIVKALHSGERKKASHLLLDFGHRSHSLSADDFVNIFKYCAES 65


>K7M8H4_SOYBN (tr|K7M8H4) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 823

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 1/49 (2%)

Query: 30  PPQQQQVVDALCSGERKKASDLLLDFGYRSR-SLKADDFVGILNYCARS 77
           P  Q+QVV+AL SG+RKKASDLL DFG RSR SL AD FV I  YCARS
Sbjct: 53  PSMQRQVVEALHSGDRKKASDLLSDFGSRSRHSLTADHFVHIFEYCARS 101


>M5X5C4_PRUPE (tr|M5X5C4) Uncharacterized protein OS=Prunus persica
          GN=PRUPE_ppa022231mg PE=4 SV=1
          Length = 772

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 37/45 (82%)

Query: 33 QQQVVDALCSGERKKASDLLLDFGYRSRSLKADDFVGILNYCARS 77
          Q Q+VDAL  GER +AS+LLL+ G+ + SL+ADDF+ ILNYCA+S
Sbjct: 2  QMQIVDALRLGERGQASNLLLNLGHGNDSLRADDFIYILNYCAKS 46