Miyakogusa Predicted Gene
- Lj0g3v0286159.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0286159.1 Non Chatacterized Hit- tr|I1L775|I1L775_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.33,0.000000000004,no description,Nucleotide-binding,
alpha-beta plait; coiled-coil,NULL; RNA-binding domain,
RBD,NULL;,CUFF.19089.1
(229 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7LGK2_SOYBN (tr|K7LGK2) Uncharacterized protein OS=Glycine max ... 89 8e-16
K7N0K3_SOYBN (tr|K7N0K3) Uncharacterized protein OS=Glycine max ... 70 5e-10
Q41042_PEA (tr|Q41042) L. (clone na-481-5) OS=Pisum sativum PE=2... 64 3e-08
G7JNJ5_MEDTR (tr|G7JNJ5) RNA-binding protein OS=Medicago truncat... 64 5e-08
G7JNJ6_MEDTR (tr|G7JNJ6) RNA-binding protein OS=Medicago truncat... 64 5e-08
I1LPJ9_SOYBN (tr|I1LPJ9) Uncharacterized protein OS=Glycine max ... 63 7e-08
G7J1Z7_MEDTR (tr|G7J1Z7) 28 kDa ribonucleoprotein OS=Medicago tr... 59 2e-06
>K7LGK2_SOYBN (tr|K7LGK2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 686
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 67 ADASALPPPKNGKREGD--DEKQANTKKQRTGEVIEEQKNKEKINTHYS----EKDKKPE 120
A A+A+PPP+ GKREG+ DE+Q N KK + EV EEQ+ ++I + S E DK PE
Sbjct: 9 AGATAVPPPRIGKREGENEDEQQVNAKKHKRHEVAEEQRIMDEIVSDDSFEDFEPDKNPE 68
Query: 121 SKKR-----------EPATSCRSLESTXXXXXXXXXXXXXXXXNH-------------VN 156
+KK + A SLES NH V
Sbjct: 69 AKKDSLSKQEKKGKPDSANCSGSLESLADGSEEGKGNMDIDEGNHSEECNEETLEKMQVL 128
Query: 157 XXXXXXXXXXXXXXXXXXXXXXCPKTPTTMKGKDA-PKTIYVRNLSYSVERADLESLFKD 215
PK T ++A KTI RNLSYSVERADLE+LFK+
Sbjct: 129 PVKSSENSEKGIEEKDPKAPQENPKMLATPNERNAGSKTIVTRNLSYSVERADLENLFKE 188
Query: 216 CGEVVDVHLHTDSE 229
CGE+VDV LHTD+E
Sbjct: 189 CGEIVDVRLHTDAE 202
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Query: 181 KTPTTMKGKDAP-KTIYVRNLSYSVERADLESLFKDCGEVVDVHLH 225
K T+K ++AP KTIYV+NLSY VERAD+E+LFK+CG++VDVHLH
Sbjct: 424 KRVATLKEQNAPSKTIYVKNLSYRVERADMENLFKECGKIVDVHLH 469
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 191 APKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTD 227
A KTIY +NL+YS+E+ D+E LFK+CGE+V + LHTD
Sbjct: 296 ASKTIYAKNLAYSMEQDDMEYLFKNCGEIVSIRLHTD 332
>K7N0K3_SOYBN (tr|K7N0K3) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 495
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 180 PKTPTTMKGKDA-PKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTDSE 229
PK +T ++A KTI RNLSYSVERADLE+LFK CGEVVDV LHTD+E
Sbjct: 152 PKMLSTPNERNAGSKTIVTRNLSYSVERADLENLFKPCGEVVDVRLHTDAE 202
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 181 KTPTTMKGKDAP-KTIYVRNLSYSVERADLESLFKDCGEVVDVHLH 225
K T+K ++AP KTIYVRNLSY VE+AD+E+LFK+CG++VDV LH
Sbjct: 427 KRVATLKEQNAPPKTIYVRNLSYRVEQADMENLFKECGKIVDVRLH 472
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 193 KTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTD 227
KTIY NL+YS+E+ D+E LFK+CGE+VD+ LHTD
Sbjct: 301 KTIYASNLAYSMEKDDMEFLFKNCGEIVDIRLHTD 335
>Q41042_PEA (tr|Q41042) L. (clone na-481-5) OS=Pisum sativum PE=2 SV=1
Length = 611
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 179 CPKTPTTMKGKDAPKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTD 227
P TP T KT++V NLS+SV+R+D+ES F++CGEVVDV L +D
Sbjct: 341 APATPATPSENGGSKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASD 389
>G7JNJ5_MEDTR (tr|G7JNJ5) RNA-binding protein OS=Medicago truncatula
GN=MTR_4g074930 PE=4 SV=1
Length = 623
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 179 CPKTPTTMKGKDAPKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTDSE 229
P TP T KT++V NLS+SV+R+D+E F+DCGEVVDV +D E
Sbjct: 350 APNTPATPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEE 400
>G7JNJ6_MEDTR (tr|G7JNJ6) RNA-binding protein OS=Medicago truncatula
GN=MTR_4g074930 PE=4 SV=1
Length = 635
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 179 CPKTPTTMKGKDAPKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTDSE 229
P TP T KT++V NLS+SV+R+D+E F+DCGEVVDV +D E
Sbjct: 362 APNTPATPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEE 412
>I1LPJ9_SOYBN (tr|I1LPJ9) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 744
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 179 CPKTPTTMKGK-DAPKTIYVRNLSYSVERADLESLFKDCGEVVDVHLHTD 227
PKTP T K + A KT++V NL +SVERAD+E FKD GEVVDV TD
Sbjct: 459 APKTPVTPKEETGASKTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATD 508
>G7J1Z7_MEDTR (tr|G7J1Z7) 28 kDa ribonucleoprotein OS=Medicago truncatula
GN=MTR_3g050860 PE=4 SV=1
Length = 370
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 180 PKTPTTMKGKDAPKTIYVRNLSYSVERADLESLFKDCGEVVDVHL 224
P TP T K KT+YV NLS+SV+++D+E+ F+ CGEVVDV L
Sbjct: 254 PNTPATKKFNSRVKTLYVGNLSFSVQKSDIENFFRVCGEVVDVRL 298