Miyakogusa Predicted Gene

Lj0g3v0277989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277989.1 tr|G7KY07|G7KY07_MEDTR Ubiquinone biosynthesis
monooxygenase COQ6 OS=Medicago truncatula GN=MTR_7g05,71.79,0.0000004,
,CUFF.18468.1
         (39 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7KY07_MEDTR (tr|G7KY07) Ubiquinone biosynthesis monooxygenase C...    56   4e-06

>G7KY07_MEDTR (tr|G7KY07) Ubiquinone biosynthesis monooxygenase COQ6
          OS=Medicago truncatula GN=MTR_7g051960 PE=4 SV=1
          Length = 697

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 32/39 (82%)

Query: 1  MNSVLKKSVSNIYALKIPRKSFCSKVVKVAGSTTGEPSN 39
          MN V+KK+VSN++ALKIPRK FCS+VVKV  ST   PSN
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQVVKVDASTNILPSN 39