Miyakogusa Predicted Gene

Lj0g3v0267029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0267029.1 Non Chatacterized Hit- tr|K4D0W2|K4D0W2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.12,0.0000000001,seg,NULL,
NODE_107017_length_312_cov_7.948718.path2.1
         (110 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7KG13_MEDTR (tr|G7KG13) Putative uncharacterized protein OS=Med...    68   1e-09
K4D0W2_SOLLC (tr|K4D0W2) Uncharacterized protein OS=Solanum lyco...    56   6e-06

>G7KG13_MEDTR (tr|G7KG13) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_5g077710 PE=4 SV=1
          Length = 388

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/38 (81%), Positives = 34/38 (89%)

Query: 73  LPPEFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTLF 110
           LPPEF A+TS QKLPLG NRNF+SDTVH PAG+ACTLF
Sbjct: 65  LPPEFFASTSPQKLPLGFNRNFNSDTVHPPAGSACTLF 102


>K4D0W2_SOLLC (tr|K4D0W2) Uncharacterized protein OS=Solanum lycopersicum
           GN=Solyc10g052600.1 PE=4 SV=1
          Length = 397

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 2/54 (3%)

Query: 57  AIADAAANSGEDEEAPLPPEFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTLF 110
           AI +++ N+  DE   LP EFLA TS QKLP G N+NF+SD +  P G  CTLF
Sbjct: 60  AIQESSDNTQTDEN--LPSEFLAFTSPQKLPRGFNKNFNSDEIMPPIGRPCTLF 111