Miyakogusa Predicted Gene

Lj0g3v0256369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256369.1 Non Chatacterized Hit- tr|I1MKV6|I1MKV6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,52.13,0.000000000000004,seg,NULL,CUFF.16841.1
         (89 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1N8E9_SOYBN (tr|I1N8E9) Uncharacterized protein OS=Glycine max ...    63   3e-08
I1MKV6_SOYBN (tr|I1MKV6) Uncharacterized protein OS=Glycine max ...    63   3e-08

>I1N8E9_SOYBN (tr|I1N8E9) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 98

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 6/72 (8%)

Query: 22 VSAVPATRTSALSGEDA--SVMPYFAQL---LEHSEEMHLDMEEGGFMARRLGLETHDYG 76
          VSA+PATRT  L GE+   S +P   +L   + + E + +DM EG FM RR+ LET DY 
Sbjct: 24 VSAIPATRTQNLKGEEEEFSALPSLTRLDHVVGNGEVVLVDMNEG-FMERRVDLETQDYE 82

Query: 77 GTGENHDHDPNT 88
          GTG N DHDP +
Sbjct: 83 GTGANKDHDPKS 94


>I1MKV6_SOYBN (tr|I1MKV6) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 131

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 7/73 (9%)

Query: 22  VSAVPATRTSALSGE---DASVMPYFAQL---LEHSEEMHLDMEEGGFMARRLGLETHDY 75
           VSA+PATRT  L GE   D S +P   ++   L + E + +DM EG F+ RR+ LET DY
Sbjct: 56  VSAIPATRTQNLKGEEEEDFSALPSLTRVDHALGNGEVVLIDMNEG-FIERRVDLETQDY 114

Query: 76  GGTGENHDHDPNT 88
            GTG N DHDP +
Sbjct: 115 EGTGANKDHDPKS 127