Miyakogusa Predicted Gene

Lj0g3v0251719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251719.1 Non Chatacterized Hit- tr|I1MII4|I1MII4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13860
PE,59.68,0.00000000002, ,CUFF.16496.1
         (63 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M1AUB1_SOLTU (tr|M1AUB1) Uncharacterized protein OS=Solanum tube...    64   2e-08

>M1AUB1_SOLTU (tr|M1AUB1) Uncharacterized protein OS=Solanum tuberosum
           GN=PGSC0003DMG400011670 PE=4 SV=1
          Length = 654

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)

Query: 2   QEILTFCSRYLDNIETRWNRPRRVDDVPNDIQPKTRVAELFPQIGKPVGGSSYFTLTSTE 61
           ++ LTFCS Y+++IETR+NRPRRV D P D+   + ++ LFPQ+GKP   S  F L   +
Sbjct: 315 EKTLTFCSWYIEDIETRFNRPRRVRDEPTDM--PSGMSSLFPQLGKPASASENFPLNPMQ 372

Query: 62  KL 63
           KL
Sbjct: 373 KL 374