Miyakogusa Predicted Gene

Lj0g3v0249659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249659.1 Non Chatacterized Hit- tr|D7MDR2|D7MDR2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,33.51,3e-17,seg,NULL,CUFF.16330.1
         (211 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1JYQ9_SOYBN (tr|I1JYQ9) Uncharacterized protein OS=Glycine max ...    87   3e-15
M5X3G7_PRUPE (tr|M5X3G7) Uncharacterized protein OS=Prunus persi...    64   3e-08

>I1JYQ9_SOYBN (tr|I1JYQ9) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 215

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 75/171 (43%), Gaps = 33/171 (19%)

Query: 41  KSQTLAFLHRIRSSLTETLHPLKDXXXXXXXXXXXXXXXXQTQFDLILREILHLDDGSTR 100
           KSQTL FLHRIRSS  +TL P  +                Q+QF  I +  LH ++ S +
Sbjct: 78  KSQTLPFLHRIRSSFRQTLPPTNNHHFAPLSF--------QSQFHTIFQNALHDNNRSQQ 129

Query: 101 SPPPAVVGVPHGEGLKKKKRVVDSAAVAANGTDAKDRDLTTAAAMVDVNDDLVSLPAGGT 160
              P+    P  +GLKKKKR  D                  A A +DV+DD VSL     
Sbjct: 130 QQQPSPPLNPPAQGLKKKKRPND------------------APATLDVSDDAVSLK---- 167

Query: 161 KGVPGXXXXXXXXXXXXXXXXXXXXXXXXFVCAVLFVIWLWVCSGFKCMTY 211
              P                         FVCAVLFVIWLWVCSGFKCM Y
Sbjct: 168 ---PQLHNHSNKAKHVWKKHVWVLLLLDLFVCAVLFVIWLWVCSGFKCMAY 215


>M5X3G7_PRUPE (tr|M5X3G7) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa010273mg PE=4 SV=1
          Length = 256

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 73/190 (38%), Gaps = 32/190 (16%)

Query: 41  KSQTLAFLHRIRSSLTETLHPLKDXXXXXXXXXXXXXXXXQTQFDLILREILHLDDGSTR 100
           +S+ L+FL+R++    E      +                Q QFD I+R+I+  D     
Sbjct: 76  QSEALSFLNRLKCDFEEA-----NGSGSILVRDNYASHCFQAQFDSIIRKIMASDLELPN 130

Query: 101 SPPPA-----------------VVGVPHGEGLKKKKRVVDSAAVAANGTDAKDRDLTTAA 143
           SPP +                 ++G    EGLKKKKR+    +   NG   KD  +TT  
Sbjct: 131 SPPASRNLSLSSSKGKKLVLTPLLGKKTSEGLKKKKRL----SGELNGDAGKD--VTTME 184

Query: 144 AMVDVNDD----LVSLPAGGTKGVPGXXXXXXXXXXXXXXXXXXXXXXXXFVCAVLFVIW 199
             VDV DD             K  P                         FVCA+LF IW
Sbjct: 185 KKVDVCDDVNGGFRDFSLQTQKNGPLLSGDRQKAKQVWRKHVWVVLMLDLFVCAILFGIW 244

Query: 200 LWVCSGFKCM 209
           LWVC GFKC+
Sbjct: 245 LWVCRGFKCI 254