Miyakogusa Predicted Gene
- Lj0g3v0246539.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0246539.1 Non Chatacterized Hit- tr|D8TRD2|D8TRD2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,40,7e-16,Pseudouridine synthase,Pseudouridine synthase, catalytic
domain; no description,Pseudouridine
syntha,NODE_50229_length_1121_cov_7.661909.path1.1
(248 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7KAA8_SOYBN (tr|K7KAA8) Uncharacterized protein OS=Glycine max ... 343 2e-92
I1JSA0_SOYBN (tr|I1JSA0) Uncharacterized protein OS=Glycine max ... 336 4e-90
G7KFJ6_MEDTR (tr|G7KFJ6) tRNA pseudouridine synthase OS=Medicago... 317 2e-84
A5C2V2_VITVI (tr|A5C2V2) Putative uncharacterized protein OS=Vit... 278 1e-72
F6GUG3_VITVI (tr|F6GUG3) Putative uncharacterized protein OS=Vit... 276 4e-72
M5WP30_PRUPE (tr|M5WP30) Uncharacterized protein OS=Prunus persi... 270 3e-70
K7KAB0_SOYBN (tr|K7KAB0) tRNA pseudouridine synthase OS=Glycine ... 267 2e-69
G7KFJ8_MEDTR (tr|G7KFJ8) Pseudouridylate synthase OS=Medicago tr... 264 2e-68
B9I6V0_POPTR (tr|B9I6V0) tRNA pseudouridine synthase (Fragment) ... 262 8e-68
K4CTC1_SOLLC (tr|K4CTC1) tRNA pseudouridine synthase OS=Solanum ... 257 3e-66
M0TC53_MUSAM (tr|M0TC53) Uncharacterized protein OS=Musa acumina... 256 6e-66
K4A8J3_SETIT (tr|K4A8J3) Uncharacterized protein OS=Setaria ital... 237 2e-60
C5X0R7_SORBI (tr|C5X0R7) Putative uncharacterized protein Sb01g0... 236 5e-60
B4FLR5_MAIZE (tr|B4FLR5) Uncharacterized protein OS=Zea mays PE=... 235 1e-59
I1H5P7_BRADI (tr|I1H5P7) Uncharacterized protein OS=Brachypodium... 235 1e-59
M0VAM5_HORVD (tr|M0VAM5) Uncharacterized protein OS=Hordeum vulg... 235 1e-59
G8GJ72_LINUS (tr|G8GJ72) Putative pseudouridine synthase family ... 234 2e-59
B4FF04_MAIZE (tr|B4FF04) Uncharacterized protein OS=Zea mays PE=... 234 2e-59
J3LNL0_ORYBR (tr|J3LNL0) Uncharacterized protein OS=Oryza brachy... 233 4e-59
D7LBM5_ARALL (tr|D7LBM5) tRNA pseudouridine synthase family prot... 233 5e-59
M8C578_AEGTA (tr|M8C578) Putative tRNA pseudouridine synthase OS... 232 8e-59
M7ZGK9_TRIUA (tr|M7ZGK9) Putative tRNA pseudouridine synthase OS... 229 6e-58
B8AP18_ORYSI (tr|B8AP18) Putative uncharacterized protein OS=Ory... 229 6e-58
Q10LQ9_ORYSJ (tr|Q10LQ9) tRNA pseudouridine synthase family prot... 229 6e-58
I1PB50_ORYGL (tr|I1PB50) Uncharacterized protein OS=Oryza glaber... 229 7e-58
Q10LR0_ORYSJ (tr|Q10LR0) Os03g0338600 protein OS=Oryza sativa su... 228 1e-57
A3AHR5_ORYSJ (tr|A3AHR5) Putative uncharacterized protein OS=Ory... 228 1e-57
M4E1Y9_BRARP (tr|M4E1Y9) Uncharacterized protein OS=Brassica rap... 222 1e-55
R0HSD1_9BRAS (tr|R0HSD1) Uncharacterized protein OS=Capsella rub... 212 8e-53
M1BMH1_SOLTU (tr|M1BMH1) Uncharacterized protein OS=Solanum tube... 173 5e-41
B9RVG6_RICCO (tr|B9RVG6) Putative uncharacterized protein OS=Ric... 168 2e-39
A9T4Z2_PHYPA (tr|A9T4Z2) tRNA pseudouridine synthase (Fragment) ... 142 1e-31
D8SIT9_SELML (tr|D8SIT9) tRNA pseudouridine synthase OS=Selagine... 134 3e-29
D8QP88_SELML (tr|D8QP88) tRNA pseudouridine synthase (Fragment) ... 132 8e-29
D8RMK1_SELML (tr|D8RMK1) tRNA pseudouridine synthase (Fragment) ... 128 2e-27
B9INP6_POPTR (tr|B9INP6) Predicted protein OS=Populus trichocarp... 116 6e-24
E1ZUF7_CHLVA (tr|E1ZUF7) Putative uncharacterized protein OS=Chl... 100 5e-19
B9RVG5_RICCO (tr|B9RVG5) tRNA pseudouridine synthase OS=Ricinus ... 89 2e-15
D8TRD2_VOLCA (tr|D8TRD2) Putative uncharacterized protein OS=Vol... 86 1e-14
D8TUP7_VOLCA (tr|D8TUP7) Putative uncharacterized protein OS=Vol... 80 6e-13
K8F680_9CHLO (tr|K8F680) Uncharacterized protein OS=Bathycoccus ... 80 7e-13
A8J7Q4_CHLRE (tr|A8J7Q4) tRNA pseudouridine synthase (Fragment) ... 79 1e-12
I0Z2B4_9CHLO (tr|I0Z2B4) tRNA pseudouridine synthase OS=Coccomyx... 79 1e-12
F0WUQ6_9STRA (tr|F0WUQ6) Ubiquitin fusion degradation protein pu... 76 1e-11
A4S8M4_OSTLU (tr|A4S8M4) Predicted protein OS=Ostreococcus lucim... 76 1e-11
Q00TY6_OSTTA (tr|Q00TY6) PUSH_ARATH Putative tRNA pseudouridine ... 75 2e-11
I1ICG1_BRADI (tr|I1ICG1) Uncharacterized protein OS=Brachypodium... 73 9e-11
M4EAK5_BRARP (tr|M4EAK5) Uncharacterized protein OS=Brassica rap... 72 1e-10
C1N6F4_MICPC (tr|C1N6F4) Predicted protein OS=Micromonas pusilla... 69 9e-10
F2EAU5_HORVD (tr|F2EAU5) Predicted protein OS=Hordeum vulgare va... 69 1e-09
Q9LN29_ARATH (tr|Q9LN29) F14O10.3 protein OS=Arabidopsis thalian... 69 1e-09
M7ZNB9_TRIUA (tr|M7ZNB9) tRNA pseudouridine synthase A, mitochon... 69 1e-09
N1R2D7_AEGTA (tr|N1R2D7) tRNA pseudouridine synthase A OS=Aegilo... 69 1e-09
K3YRG0_SETIT (tr|K3YRG0) Uncharacterized protein OS=Setaria ital... 69 1e-09
D7KJ05_ARALL (tr|D7KJ05) tRNA pseudouridine synthase family prot... 69 2e-09
R0GW67_9BRAS (tr|R0GW67) Uncharacterized protein OS=Capsella rub... 69 2e-09
D7KJ10_ARALL (tr|D7KJ10) tRNA pseudouridine synthase family prot... 68 2e-09
K4B5X8_SOLLC (tr|K4B5X8) Uncharacterized protein OS=Solanum lyco... 68 3e-09
C5Y1C3_SORBI (tr|C5Y1C3) Putative uncharacterized protein Sb04g0... 68 3e-09
D8SSE2_SELML (tr|D8SSE2) tRNA pseudouridine synthase (Fragment) ... 67 4e-09
D8SNZ9_SELML (tr|D8SNZ9) tRNA pseudouridine synthase (Fragment) ... 67 4e-09
C1EHS5_MICSR (tr|C1EHS5) Predicted protein OS=Micromonas sp. (st... 67 4e-09
Q6ESS0_ORYSJ (tr|Q6ESS0) Os02g0668400 protein OS=Oryza sativa su... 67 7e-09
I1P2Z2_ORYGL (tr|I1P2Z2) Uncharacterized protein OS=Oryza glaber... 67 8e-09
B8AGD8_ORYSI (tr|B8AGD8) Putative uncharacterized protein OS=Ory... 66 8e-09
E9GZJ2_DAPPU (tr|E9GZJ2) tRNA pseudouridine synthase (Fragment) ... 66 8e-09
A3A9Y8_ORYSJ (tr|A3A9Y8) Putative uncharacterized protein OS=Ory... 66 1e-08
J3LFN9_ORYBR (tr|J3LFN9) tRNA pseudouridine synthase OS=Oryza br... 66 1e-08
A7ASP1_BABBO (tr|A7ASP1) tRNA pseudouridine synthase OS=Babesia ... 65 2e-08
Q4N6R8_THEPA (tr|Q4N6R8) tRNA pseudouridine synthase OS=Theileri... 65 2e-08
M5Y523_PRUPE (tr|M5Y523) Uncharacterized protein OS=Prunus persi... 64 3e-08
B9R8H6_RICCO (tr|B9R8H6) Pseudouridylate synthase, putative OS=R... 64 3e-08
A5AJY9_VITVI (tr|A5AJY9) Putative uncharacterized protein OS=Vit... 64 4e-08
C0P5B5_MAIZE (tr|C0P5B5) Uncharacterized protein OS=Zea mays PE=... 64 5e-08
F6H0D1_VITVI (tr|F6H0D1) tRNA pseudouridine synthase OS=Vitis vi... 64 6e-08
M4DH09_BRARP (tr|M4DH09) tRNA pseudouridine synthase OS=Brassica... 64 6e-08
M0RSV4_MUSAM (tr|M0RSV4) Uncharacterized protein OS=Musa acumina... 62 1e-07
A9TRH5_PHYPA (tr|A9TRH5) tRNA pseudouridine synthase OS=Physcomi... 62 1e-07
I0Z8C0_9CHLO (tr|I0Z8C0) tRNA pseudouridine synthase (Fragment) ... 62 1e-07
H3B8J2_LATCH (tr|H3B8J2) tRNA pseudouridine synthase (Fragment) ... 62 1e-07
M1AM30_SOLTU (tr|M1AM30) Uncharacterized protein OS=Solanum tube... 62 2e-07
G7JGU0_MEDTR (tr|G7JGU0) Uncharacterized protein OS=Medicago tru... 62 2e-07
B7FLC8_MEDTR (tr|B7FLC8) Uncharacterized protein OS=Medicago tru... 62 2e-07
G7JGT6_MEDTR (tr|G7JGT6) tRNA pseudouridine synthase OS=Medicago... 62 2e-07
G7JGT4_MEDTR (tr|G7JGT4) tRNA pseudouridine synthase OS=Medicago... 61 3e-07
B6TLN6_MAIZE (tr|B6TLN6) tRNA pseudouridine synthase family prot... 61 3e-07
B9GQ56_POPTR (tr|B9GQ56) tRNA pseudouridine synthase OS=Populus ... 61 3e-07
M2XVR2_GALSU (tr|M2XVR2) tRNA pseudouridine synthase A OS=Galdie... 60 4e-07
F6Y8V2_XENTR (tr|F6Y8V2) tRNA pseudouridine synthase (Fragment) ... 60 5e-07
I7I969_BABMI (tr|I7I969) tRNA pseudouridine synthase OS=Babesia ... 60 8e-07
D7KT99_ARALL (tr|D7KT99) tRNA pseudouridine synthase OS=Arabidop... 60 9e-07
Q54FA0_DICDI (tr|Q54FA0) tRNA pseudouridylate synthase OS=Dictyo... 60 9e-07
Q4UIU5_THEAN (tr|Q4UIU5) tRNA pseudouridine synthase OS=Theileri... 60 9e-07
E5GCD2_CUCME (tr|E5GCD2) tRNA pseudouridine synthase family prot... 59 1e-06
D0NH89_PHYIT (tr|D0NH89) Ubiquitin fusion degradation protein, p... 59 1e-06
E2B4B1_HARSA (tr|E2B4B1) tRNA pseudouridine synthase OS=Harpegna... 59 1e-06
Q9SGS1_ARATH (tr|Q9SGS1) tRNA pseudouridine synthase OS=Arabidop... 59 1e-06
F0ZAZ5_DICPU (tr|F0ZAZ5) tRNA pseudouridine synthase OS=Dictyost... 57 4e-06
J9KAK1_ACYPI (tr|J9KAK1) tRNA pseudouridine synthase OS=Acyrthos... 56 9e-06
>K7KAA8_SOYBN (tr|K7KAA8) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 516
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/251 (67%), Positives = 190/251 (75%), Gaps = 3/251 (1%)
Query: 1 MSNKTGXXXXXXXXXXXXXXXDVDDFVS---TTLGDKDQXXXXXXXXXXNDFSHQNSSLV 57
MS++ G D DDFVS TT DK++ N S QNSS+V
Sbjct: 266 MSDRIGSSSLTSACESESEEGDDDDFVSGRPTTFSDKEESHKPPESSESNGLSSQNSSVV 325
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
VRA+WLYEPDE DRLN SHFRK+ +CSCGKL+ LG DY+E+ IWGDSFMLHQIRKMVGT
Sbjct: 326 VRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYIEVHIWGDSFMLHQIRKMVGT 385
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
AVAVKRNLIPRD + LSL KF+RIVLPLAPPEVLILRGN F MR+SAG F R EMVS+VE
Sbjct: 386 AVAVKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAFKMRASAGNFTRQEMVSMVE 445
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE IL V+EFYTSV+LPE+SKFLDSS SPW +WVE LDKYSS DAELDEVR AW+TWK
Sbjct: 446 SEQILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKYSSIPDAELDEVRKAWKTWK 505
Query: 238 ENFRAKSASDA 248
ENFR KSAS A
Sbjct: 506 ENFRLKSASKA 516
>I1JSA0_SOYBN (tr|I1JSA0) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 518
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/226 (71%), Positives = 182/226 (80%), Gaps = 3/226 (1%)
Query: 26 FVS---TTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQ 82
FVS TTL DK++ N FS QNS++VVRA+WLYEPDE DRLN SHFRK+ +
Sbjct: 293 FVSGRPTTLSDKEESHKPPESSESNGFSSQNSTVVVRAKWLYEPDETDRLNASHFRKVFR 352
Query: 83 CSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIV 142
CSCGKL+ LG DYVE+ +WGDSFMLHQIRKMVGTAVAVKRNLIPRD + LSL KF+RIV
Sbjct: 353 CSCGKLETSLGYDYVEVHVWGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIV 412
Query: 143 LPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLD 202
PLAPPEVLILRGN F MR+SAG F R EMVS+VESEPIL +EFYTSV+LPE+SKFLD
Sbjct: 413 FPLAPPEVLILRGNAFKMRASAGNFTRQEMVSMVESEPILKAADEFYTSVVLPEVSKFLD 472
Query: 203 SSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENFRAKSASDA 248
SS SPW +WVE LDKYSS D ELDEVR AW+TWKENFR KS S+A
Sbjct: 473 SSSSPWAKWVENLDKYSSIPDVELDEVRKAWKTWKENFRVKSESEA 518
>G7KFJ6_MEDTR (tr|G7KFJ6) tRNA pseudouridine synthase OS=Medicago truncatula
GN=MTR_5g074620 PE=3 SV=1
Length = 483
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/248 (64%), Positives = 185/248 (74%), Gaps = 12/248 (4%)
Query: 1 MSNKTGXXXXXXXXXXXXXXXDVDDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRA 60
MSN TG D DD +S G+ +Q + S NS ++A
Sbjct: 248 MSNMTGSSSLVSACDSENEESDTDDSMS---GNGEQSHKS------QECSESNS---LKA 295
Query: 61 RWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVA 120
RWL+EPD ADRLN SHFRKI +CSCGKL+ LLG +Y+EI +WGDSFMLHQIRKMVGTAVA
Sbjct: 296 RWLHEPDAADRLNASHFRKILRCSCGKLETLLGYNYIEIDVWGDSFMLHQIRKMVGTAVA 355
Query: 121 VKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEP 180
VKRN IP+DI LSLIKF+RIVLP+APPEVLILRGN F M SS G + RPEMVS+VESE
Sbjct: 356 VKRNSIPKDIFLLSLIKFSRIVLPIAPPEVLILRGNAFRMWSSGGSYTRPEMVSMVESEQ 415
Query: 181 ILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENF 240
IL V+EFYTSVMLPELSKFLDSSKSPW +WVE+LDKYSS + +L+EVR AWRTWKENF
Sbjct: 416 ILKSVDEFYTSVMLPELSKFLDSSKSPWADWVEKLDKYSSIPNDQLEEVREAWRTWKENF 475
Query: 241 RAKSASDA 248
RAK AS+A
Sbjct: 476 RAKPASEA 483
>A5C2V2_VITVI (tr|A5C2V2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_034891 PE=4 SV=1
Length = 602
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 52 QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQI 111
Q+S LVVRARWL+ PDE DR++ SHFRKI CSCGKL++ LG DYVE+ I G+SFMLHQI
Sbjct: 320 QSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQI 379
Query: 112 RKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPE 171
RKMVGTA+AVKR L+PRDIL+LSL KF+RIVLPLAP EVLILRGN+FS+R G RPE
Sbjct: 380 RKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPE 439
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
M++L+ESE IL V+EFYTSV+LP++SKFLD SKSPW +W+E L SS +AELD+VR
Sbjct: 440 MLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENL-TLSSIPEAELDDVRT 498
Query: 232 AWRTWKENFRAKSASD 247
AW+ WKENFR+++ +
Sbjct: 499 AWKLWKENFRSRTKCE 514
>F6GUG3_VITVI (tr|F6GUG3) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_06s0004g07710 PE=4 SV=1
Length = 516
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 52 QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQI 111
Q+ LVVRARWL+ PDE DR++ SHFRKI CSCGKL++ LG DYVE+ I G+SFMLHQI
Sbjct: 320 QSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQI 379
Query: 112 RKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPE 171
RKMVGTA+AVKR L+PRDIL+LSL KF+RIVLPLAP EVLILRGN+FS+R G RPE
Sbjct: 380 RKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPE 439
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
M++L+ESE IL V+EFYTSV+LP++SKFLD SKSPW +W+E L SS +AELD+VR
Sbjct: 440 MLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENL-TLSSIPEAELDDVRT 498
Query: 232 AWRTWKENFRAKS 244
AW+ WKENFR+++
Sbjct: 499 AWKLWKENFRSRT 511
>M5WP30_PRUPE (tr|M5WP30) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004352mg PE=4 SV=1
Length = 515
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 151/189 (79%)
Query: 52 QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQI 111
Q++ V+RARWLYEPDE DR++ SHFRKI CSCGKL++ LG DYVE+ I G+SFMLHQI
Sbjct: 318 QSAGSVIRARWLYEPDERDRISASHFRKIFLCSCGKLEKSLGHDYVELSISGESFMLHQI 377
Query: 112 RKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPE 171
RKMVGTAVA+KR L+PRDIL+LSL F+RI+LPLAP EVL LRGN FS+R G RPE
Sbjct: 378 RKMVGTAVAIKRKLLPRDILTLSLAMFSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRPE 437
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
M+++VES I+ V+EFYTSVMLPE+SKFL+ S PW EWVE LD+ + DAELDEVR
Sbjct: 438 MMAMVESGEIIKAVDEFYTSVMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRN 497
Query: 232 AWRTWKENF 240
AW+ WKE F
Sbjct: 498 AWKVWKEKF 506
>K7KAB0_SOYBN (tr|K7KAB0) tRNA pseudouridine synthase OS=Glycine max PE=3 SV=1
Length = 493
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 156/200 (78%)
Query: 47 NDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSF 106
N Q+S LV RARWLYEPDEADRL+ SHFRK+ QCSCGKL+ LG +Y+EI I G+SF
Sbjct: 292 NGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESF 351
Query: 107 MLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGK 166
MLHQIRKMVGTAVAVKR +P+DI+ LSL +F+RI+LPLAP E LILRGN FS+R+ G
Sbjct: 352 MLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGN 411
Query: 167 FIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAEL 226
RPEM ++V+SE I V++FYTSVMLP++SK LD S+SPW EW+E+LD ++S + +L
Sbjct: 412 ITRPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQL 471
Query: 227 DEVRMAWRTWKENFRAKSAS 246
DEVR AW +KE F +++
Sbjct: 472 DEVRKAWNLFKEKFETTTST 491
>G7KFJ8_MEDTR (tr|G7KFJ8) Pseudouridylate synthase OS=Medicago truncatula
GN=MTR_5g074640 PE=4 SV=1
Length = 501
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 157/209 (75%)
Query: 32 GDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRL 91
G D + Q+SS VVRA+WLYEPDEADRLN SHFR++ +CS GKL++
Sbjct: 285 GTSDSCEPVIETGNKGNLHDQSSSSVVRAKWLYEPDEADRLNASHFRRVFRCSSGKLEKS 344
Query: 92 LGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVL 151
+G Y+EI I G+SFMLHQIRKMV TAVAVKR L+PRDI++LSL KF+RI+LPLAP EVL
Sbjct: 345 MGHSYIEIYIEGESFMLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVL 404
Query: 152 ILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEW 211
+LRGN+FSMR+ G RPEM ++VESE I V++FY SVMLP++SKFLD S+ PWVEW
Sbjct: 405 LLRGNSFSMRTKPGNVTRPEMQTIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEW 464
Query: 212 VERLDKYSSFADAELDEVRMAWRTWKENF 240
+E+ D ++S + +LDEVR A WKENF
Sbjct: 465 IEKFDAHTSIPNDQLDEVRKARNLWKENF 493
>B9I6V0_POPTR (tr|B9I6V0) tRNA pseudouridine synthase (Fragment) OS=Populus
trichocarpa GN=POPTRDRAFT_239920 PE=3 SV=1
Length = 445
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 152/185 (82%)
Query: 52 QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQI 111
Q+S+L +RARWL+EPDE DR+ +HFRKI +CSCGKL++ LG D+VEI IWG+SFMLHQI
Sbjct: 261 QSSNLPLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESFMLHQI 320
Query: 112 RKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPE 171
RKMVGTAVAVKR ++PRD++ LSL KF+RIVLPLAP EVLILRGN FS+R +G+ RPE
Sbjct: 321 RKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGEGKRPE 380
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
M ++VESE IL V EFY+++MLP++SKFLD W EWVE LDKY+S DA+LDEVR+
Sbjct: 381 METMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQLDEVRI 440
Query: 232 AWRTW 236
A + W
Sbjct: 441 ARKVW 445
>K4CTC1_SOLLC (tr|K4CTC1) tRNA pseudouridine synthase OS=Solanum lycopersicum
GN=Solyc09g056260.2 PE=3 SV=1
Length = 496
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 154/192 (80%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 112
NS + ++ARWL+EPD D+L+ +HFR+I C CGKL++LLG +YVE+ I G+SFMLHQIR
Sbjct: 292 NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIR 351
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 172
KMVGTAVA+KRNL+P D L +SL KF+RIVLPLAP EVL+L+GN F++R+ G IRPEM
Sbjct: 352 KMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEM 411
Query: 173 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 232
++L+ES+ IL V++FY S +LP+LS+FLD SKSPW EWVE LD +S D +L+EVR+A
Sbjct: 412 LTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVA 471
Query: 233 WRTWKENFRAKS 244
W+ WK + +++
Sbjct: 472 WKLWKAQYDSRT 483
>M0TC53_MUSAM (tr|M0TC53) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 595
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 153/217 (70%)
Query: 24 DDFVSTTLGDKDQXXXXXXXXXXNDFSHQNSSLVVRARWLYEPDEADRLNVSHFRKISQC 83
++F+ + D D+ N + VRARWL+EPDE DRLN SHFRKI
Sbjct: 372 ENFILSCNTDSDEEVYESSEQESNQIKNFGVPSPVRARWLHEPDEMDRLNASHFRKIFGF 431
Query: 84 SCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVL 143
SCG L+ LG +YVE+ I G+SFMLHQIRKMVGTAVAVKR L+P+DI+ +SL KF+RIVL
Sbjct: 432 SCGNLETSLGINYVELSICGESFMLHQIRKMVGTAVAVKRGLLPKDIIEMSLAKFSRIVL 491
Query: 144 PLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDS 203
PLAP EVLILR N +++R G RPEM ++ ES+ I V+EFY+SV+LP++SKFLD
Sbjct: 492 PLAPSEVLILRSNRYAIRGHPGNITRPEMKTMTESQEIQGAVDEFYSSVLLPKVSKFLDP 551
Query: 204 SKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKENF 240
SKSPW EWV+ L+ Y+S +D ELDEVR W WKE F
Sbjct: 552 SKSPWQEWVDNLETYTSISDEELDEVRKPWNVWKEGF 588
>K4A8J3_SETIT (tr|K4A8J3) Uncharacterized protein OS=Setaria italica
GN=Si035199m.g PE=4 SV=1
Length = 519
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 5/207 (2%)
Query: 47 NDFS-HQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDS 105
ND + H + + ++ARWLYEPDE+DRLN SHFR I CSCG+LQ G +VE+ I G S
Sbjct: 312 NDVAKHFGNQVQIQARWLYEPDESDRLNASHFRDIITCSCGELQSSSGIQFVELTICGVS 371
Query: 106 FMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAG 165
FMLHQIRKMVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLILR N+F ++ G
Sbjct: 372 FMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILRDNSFCTKNKEG 431
Query: 166 KFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAE 225
+ +RP + S+ +S + V EFY + +LPEL+KFLD S PW EWVE LD++++ D++
Sbjct: 432 RLVRPGIESMNKSAEVRKGVTEFYKAALLPELAKFLDPSMPPWKEWVENLDQFATIPDSQ 491
Query: 226 LDEVRMAWRTWKENF----RAKSASDA 248
LDEVR A++ WK ++ AK ++D
Sbjct: 492 LDEVREAYKIWKADYDRVKMAKKSADG 518
>C5X0R7_SORBI (tr|C5X0R7) Putative uncharacterized protein Sb01g035980 OS=Sorghum
bicolor GN=Sb01g035980 PE=4 SV=1
Length = 520
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 143/187 (76%)
Query: 54 SSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRK 113
S + ++ARWL+EPDE+DRLN SHFR I CSCG+LQ G +VE+ I G SFMLHQIRK
Sbjct: 321 SRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSGIQFVELTICGVSFMLHQIRK 380
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
MVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLIL+ N+F +S G+ +RP +
Sbjct: 381 MVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILKDNSFCTKSKEGRIVRPGIQ 440
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
S+ +S I VEEFY + +LPE++KFLD + PW EWVE LD+++ +D++LDEVR A+
Sbjct: 441 SMNKSAAIRKGVEEFYKAALLPEVAKFLDPAVPPWKEWVENLDRFAGISDSQLDEVREAY 500
Query: 234 RTWKENF 240
R WK ++
Sbjct: 501 RAWKADY 507
>B4FLR5_MAIZE (tr|B4FLR5) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 516
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 56 LVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMV 115
L ++ARWL+EPDE+DRLN SHFR I CSCG LQ G +VE+ I G SFMLHQIRKMV
Sbjct: 324 LQIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSSGIQFVELTICGVSFMLHQIRKMV 383
Query: 116 GTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSL 175
GTAV VKR L+PRDI+ LSL KF+RIVLP+AP EVL+L+ N+F +S G+ +RP + S+
Sbjct: 384 GTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLVLKDNSFCTKSKGGRIVRPGIQSM 443
Query: 176 VESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRT 235
+SE VEEFY + +LPE++KFLD S PW EW+E LD++S ++LDEVR A+R
Sbjct: 444 NKSEATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWLENLDRFSGIPGSQLDEVREAYRA 503
Query: 236 WKENF-RAKSASD 247
W++++ RAK A +
Sbjct: 504 WRDDYDRAKMARN 516
>I1H5P7_BRADI (tr|I1H5P7) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI1G63050 PE=4 SV=1
Length = 522
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
Query: 51 HQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ 110
H + + ++ARWL+EP+E DRL+ SHFR I CSCG+LQ G +VE+ I G SFMLHQ
Sbjct: 320 HHENHVQIQARWLHEPNENDRLSASHFRDIITCSCGELQSSSGIQFVELTICGVSFMLHQ 379
Query: 111 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRP 170
IRKMVGTAVAVKR L+P++I+ LSL KF+RIVLP+AP EVLILR N+F R+ G +RP
Sbjct: 380 IRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLPIAPSEVLILRDNSFCTRNKQGSIVRP 439
Query: 171 EMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVR 230
+ S+ ES+ + V EFY + ++PEL+K+LD+S+ PW EWVE LD ++S D++LDEVR
Sbjct: 440 GIQSINESKEVKKGVMEFYKAALVPELAKYLDASEPPWEEWVENLDHFTSIPDSQLDEVR 499
Query: 231 MAWRTWKENF-RAKSA 245
A+ W+E++ RAK+A
Sbjct: 500 TAYTAWREDYIRAKTA 515
>M0VAM5_HORVD (tr|M0VAM5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 239
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 112
S + ++ARWL+EP++ DRL+ SHFR I CSCG+LQ G +VE+ I G SFMLHQIR
Sbjct: 39 QSRVQIQARWLHEPNDNDRLSASHFRDILTCSCGELQSSSGVQFVELTICGVSFMLHQIR 98
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 172
KMVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLILR N+F R+ G +RP M
Sbjct: 99 KMVGTAVAVKRGLLPKDIIKLSLAKFSRIVLPIAPSEVLILRDNSFCTRNKQGSIVRPGM 158
Query: 173 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 232
S+ ESE I V EFY ++PEL+KFLD S PW EWVE LD ++S D++LDEVR A
Sbjct: 159 QSINESEEIKKGVMEFYKVALVPELAKFLDESLPPWQEWVENLDHFTSIPDSQLDEVRTA 218
Query: 233 WRTWKENF-RAKSA 245
+R WK+++ R K A
Sbjct: 219 YRAWKDDYDRVKMA 232
>G8GJ72_LINUS (tr|G8GJ72) Putative pseudouridine synthase family protein OS=Linum
usitatissimum PE=4 SV=1
Length = 565
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 147/183 (80%), Gaps = 1/183 (0%)
Query: 51 HQNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ 110
HQ+S +V ARWL EPDE DR+ SHFRKI +CSCG+L++ G ++VEI IWG+SFMLHQ
Sbjct: 350 HQSSGQLV-ARWLXEPDERDRIGASHFRKIIRCSCGELEKSSGYNFVEISIWGESFMLHQ 408
Query: 111 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRP 170
IRKMVGTAVAVKR+L+PRDIL+LSL KF+RIVLPLAP EVLILRGN++S+ + + R
Sbjct: 409 IRKMVGTAVAVKRDLLPRDILTLSLAKFSRIVLPLAPSEVLILRGNSYSLTRKSREGTRS 468
Query: 171 EMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVR 230
E+ ++ E+E IL V+EFY +LP++SKFLD S SPW+EWVE+LD+++ DAEL+E R
Sbjct: 469 EVQTMSEAEEILKGVDEFYVDKLLPQVSKFLDPSSSPWLEWVEKLDEHTHIPDAELNEER 528
Query: 231 MAW 233
A+
Sbjct: 529 PAF 531
>B4FF04_MAIZE (tr|B4FF04) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 369
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 143/191 (74%), Gaps = 1/191 (0%)
Query: 56 LVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMV 115
L ++ARWL+EPDE+DRLN SHFR I CSCG LQ G +VE+ I G SFMLHQIRKMV
Sbjct: 177 LQIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSSGIQFVELTICGVSFMLHQIRKMV 236
Query: 116 GTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSL 175
GTAV VKR L+PRDI+ LSL KF+RIVLP+AP EVL+L+ N+F +S G+ +RP + S+
Sbjct: 237 GTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLVLKDNSFCTKSKGGRIVRPGIQSM 296
Query: 176 VESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRT 235
+SE VEEFY + +LPE++KFLD S PW EW+E LD++S ++LDEVR A+R
Sbjct: 297 NKSEATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWLENLDRFSGIPGSQLDEVREAYRA 356
Query: 236 WKENF-RAKSA 245
W++++ RAK A
Sbjct: 357 WRDDYDRAKMA 367
>J3LNL0_ORYBR (tr|J3LNL0) Uncharacterized protein OS=Oryza brachyantha
GN=OB03G26360 PE=4 SV=1
Length = 518
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 140/183 (76%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 323 IRARWLHEPDENDRLNASHFRDILTFSCGELQSSSGMQFVELTISGVSFMLHQIRKMVGT 382
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
AVAVKR L+P+DI++LSL KF+RIVLP+AP EVLILR N+F +++ G +RP + S+ E
Sbjct: 383 AVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLILRDNSFCLKNKQGSIVRPGIQSMNE 442
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + +LPEL+ FLD+S PW EWVE LD+++S D++L+E+R A+R WK
Sbjct: 443 SEEVKKGVMEFYKAALLPELANFLDASMPPWKEWVENLDQFTSIPDSQLEEIRSAYRVWK 502
Query: 238 ENF 240
++
Sbjct: 503 ADY 505
>D7LBM5_ARALL (tr|D7LBM5) tRNA pseudouridine synthase family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481943
PE=4 SV=1
Length = 507
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 139/185 (75%), Gaps = 3/185 (1%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 112
NS + RA+WLYEPDE D+L+ +HFRK+ +C GKL+ LG +VEI IWG+SFMLHQIR
Sbjct: 298 NSQVNSRAKWLYEPDETDKLSGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQIR 357
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 172
KM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F +R RP M
Sbjct: 358 KMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLPE---RPGM 414
Query: 173 VSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMA 232
+ ESE + ++EEFY +VM+P++S+FLDS KSPW EWVE LD+ D EL++VR
Sbjct: 415 EATGESEEVEKDIEEFYRAVMVPQVSRFLDSEKSPWKEWVEHLDRNDGLIDEELEDVRKG 474
Query: 233 WRTWK 237
W WK
Sbjct: 475 WEEWK 479
>M8C578_AEGTA (tr|M8C578) Putative tRNA pseudouridine synthase OS=Aegilops
tauschii GN=F775_04013 PE=4 SV=1
Length = 429
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 141/187 (75%)
Query: 54 SSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRK 113
S + ++ARWL+EP++ DRL+ SHFR I CSCG+L+ G +VE+ I G SFMLHQIRK
Sbjct: 230 SRVQIQARWLHEPNDNDRLSASHFRDILTCSCGELRSSSGVQFVELTICGVSFMLHQIRK 289
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
MVGTAVAVKR L+P+DI+ LSL KF+R+VLP+AP EVLILR N+F R+ G +RP +
Sbjct: 290 MVGTAVAVKRGLLPKDIIQLSLAKFSRVVLPIAPSEVLILRDNSFCTRNKQGSIVRPGIQ 349
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
S+ ESE I V EFY + ++PEL+KFLD+S PW EWVE LD ++S D +LDEVR A+
Sbjct: 350 SINESEEIKKGVMEFYKAALVPELAKFLDASLPPWQEWVENLDHFTSIPDPQLDEVRTAY 409
Query: 234 RTWKENF 240
R WK+++
Sbjct: 410 RAWKDDY 416
>M7ZGK9_TRIUA (tr|M7ZGK9) Putative tRNA pseudouridine synthase OS=Triticum urartu
GN=TRIUR3_21849 PE=4 SV=1
Length = 450
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Query: 54 SSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRK 113
S + ++ARWL+EP++ DRL+ SHFR I CSC +L+ G +VE+ I G SFMLHQIRK
Sbjct: 251 SHVQIQARWLHEPNDNDRLSASHFRDILTCSCRELRSSSGVQFVELTICGASFMLHQIRK 310
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
MVGTAVAVKR L+P+DI+ LSL KF+RIVLP+AP EVLILR N+F R+ G +RP +
Sbjct: 311 MVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILRDNSFCTRNKHGSIVRPGIQ 370
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
S+ ESE I V EFY + ++PEL+KFLD+S PW EWVE LD ++S D +LDEVR A+
Sbjct: 371 SINESEEIKKGVMEFYKAALVPELAKFLDASLPPWQEWVENLDHFTSIPDPQLDEVRTAY 430
Query: 234 RTWKENF-RAKSA 245
R WK+++ R K A
Sbjct: 431 RAWKDDYDRVKMA 443
>B8AP18_ORYSI (tr|B8AP18) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_11484 PE=4 SV=1
Length = 722
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 139/183 (75%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 527 IRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGT 586
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP + S+ E
Sbjct: 587 SVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNE 646
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR A+R WK
Sbjct: 647 SEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWK 706
Query: 238 ENF 240
++
Sbjct: 707 ADY 709
>Q10LQ9_ORYSJ (tr|Q10LQ9) tRNA pseudouridine synthase family protein, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os03g21980 PE=2
SV=1
Length = 374
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 179 IRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGT 238
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP + S+ E
Sbjct: 239 SVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNE 298
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR A+R WK
Sbjct: 299 SEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWK 358
Query: 238 ENF-RAKSA 245
++ R K A
Sbjct: 359 ADYDRVKMA 367
>I1PB50_ORYGL (tr|I1PB50) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 516
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 139/183 (75%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 321 IRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGT 380
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP + S+ E
Sbjct: 381 SVAVKRGLLPKDIIALSLTKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNE 440
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR A+R WK
Sbjct: 441 SEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWK 500
Query: 238 ENF 240
++
Sbjct: 501 ADY 503
>Q10LR0_ORYSJ (tr|Q10LR0) Os03g0338600 protein OS=Oryza sativa subsp. japonica
GN=Os03g0338600 PE=4 SV=1
Length = 516
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 139/183 (75%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 321 IRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGT 380
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP + S+ E
Sbjct: 381 SVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNE 440
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR A+R WK
Sbjct: 441 SEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWK 500
Query: 238 ENF 240
++
Sbjct: 501 ADY 503
>A3AHR5_ORYSJ (tr|A3AHR5) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_10771 PE=2 SV=1
Length = 516
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 139/183 (75%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
+RARWL+EPDE DRLN SHFR I SCG+LQ G +VE+ I G SFMLHQIRKMVGT
Sbjct: 321 IRARWLHEPDENDRLNASHFRDILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGT 380
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
+VAVKR L+P+DI++LSL KF+RIVLP+AP EVL+LR N+F +R+ G +RP + S+ E
Sbjct: 381 SVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLVLRDNSFCLRNKQGTIVRPGIQSMNE 440
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
SE + V EFY + ++PEL+ FLD+S PW EWVE LD+++S D +L+EVR A+R WK
Sbjct: 441 SEEVKKGVMEFYRAALVPELANFLDASMPPWKEWVENLDRFTSIPDPQLEEVRSAYRVWK 500
Query: 238 ENF 240
++
Sbjct: 501 ADY 503
>M4E1Y9_BRARP (tr|M4E1Y9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra022789 PE=4 SV=1
Length = 505
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 112
NS +RA+WL+EPDE D+L+ +HFRK+ +CSCG L+ LG +VEI IWG+SFMLHQIR
Sbjct: 292 NSQAYIRAKWLHEPDETDKLSAAHFRKVFRCSCGNLESSLGFGFVEISIWGESFMLHQIR 351
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKF-IRPE 171
KM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F + S F RPE
Sbjct: 352 KMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVPKSPANFRRRPE 411
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
+ ++ ESE + EVEEFY VM+P++S+FLDS ++PW EW+E L++ D +L++VR
Sbjct: 412 IKAMGESEEVEREVEEFYRGVMVPQVSRFLDSEEAPWKEWLEHLERNDGMIDEQLEDVRR 471
Query: 232 AWRTWKENFR 241
W WK R
Sbjct: 472 GWEEWKAKPR 481
>R0HSD1_9BRAS (tr|R0HSD1) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10023036mg PE=4 SV=1
Length = 508
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 5/186 (2%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIR 112
NS + RA+WLYEPDE D+L+ +HFRK+ +C GKL+ LG +VEI IWG+SFMLHQIR
Sbjct: 298 NSQVNTRAKWLYEPDETDKLSGAHFRKVFRCRSGKLESSLGFRFVEISIWGESFMLHQIR 357
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEM 172
KM+GTAVAVKR L+PRDI+ LSL KFTRIVLPLAP EVLILRGN+F +R +F + ++
Sbjct: 358 KMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVR----RFPQRQV 413
Query: 173 VSLV-ESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
V ESE + E+EEFY +VM+P++S+FLDS K+PW EW+E LD+ D EL +VR
Sbjct: 414 VEAPGESEEVEKEIEEFYRAVMVPQVSRFLDSEKAPWAEWLEHLDRNDGLIDEELKDVRR 473
Query: 232 AWRTWK 237
W WK
Sbjct: 474 GWEEWK 479
>M1BMH1_SOLTU (tr|M1BMH1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400018825 PE=4 SV=1
Length = 131
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 106/131 (80%)
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
MVGTAVA+KRNL+P DIL +SL KF+RIVLPLAP EVL+L+GN F++R+ G IRPEM+
Sbjct: 1 MVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEML 60
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
+L+ES+ IL V++FY S MLP+LS+FLD SKSPW EWVE LD +S D++L+EVR+AW
Sbjct: 61 TLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAW 120
Query: 234 RTWKENFRAKS 244
+ WK + +++
Sbjct: 121 KLWKAQYDSRT 131
>B9RVG6_RICCO (tr|B9RVG6) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1135690 PE=4 SV=1
Length = 139
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 103/132 (78%)
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
MVGTAVAVKR L+PRDIL LSL KF+RIVLPLAP EVL+LRGN FS+R R EM+
Sbjct: 1 MVGTAVAVKRKLLPRDILPLSLAKFSRIVLPLAPSEVLVLRGNNFSLRKRPDIGARLEML 60
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
++VESE ILN V +FY+++MLP++SK LD SPW W+E+LD+Y+S DA+L+EVR AW
Sbjct: 61 TMVESEEILNAVNKFYSNIMLPQVSKLLDPCGSPWKIWIEKLDEYTSIPDAQLEEVRSAW 120
Query: 234 RTWKENFRAKSA 245
WKE F+ +++
Sbjct: 121 HLWKEKFQTRNS 132
>A9T4Z2_PHYPA (tr|A9T4Z2) tRNA pseudouridine synthase (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140242 PE=3 SV=1
Length = 445
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 108/181 (59%), Gaps = 6/181 (3%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
++A WL P+E+D++ SHFRK+ +CG + ++ I I G SFM+HQIRKM+GT
Sbjct: 243 LKAWWLPTPNESDKVWSSHFRKVISFNCGMPETFGEAQFIRISITGSSFMVHQIRKMIGT 302
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVE 177
A+AV L+P D++ +SL + +RIVLPLAPP+ LIL N F F P L
Sbjct: 303 AIAVFHGLLPGDVIPISLARHSRIVLPLAPPDGLILVSNDFM------PFRLPSHPKLEM 356
Query: 178 SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
S + V+EF +V++P++S + + S W W+ L++ ++E+ EVR AW W+
Sbjct: 357 SSAVRERVDEFCANVLMPDISPLISAKSSNWSIWIMNLERNVKIPESEIAEVRAAWTEWR 416
Query: 238 E 238
E
Sbjct: 417 E 417
>D8SIT9_SELML (tr|D8SIT9) tRNA pseudouridine synthase OS=Selaginella
moellendorffii GN=SELMODRAFT_117791 PE=3 SV=1
Length = 437
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 60 ARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAV 119
A WL E D DR+ H+RKI +CSCG +++ + + + G SFM+HQIRKM+GTAV
Sbjct: 259 AYWLQELDPTDRITSQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAV 318
Query: 120 AVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESE 179
AV R L+P DI+ +SL + +RIVLP+AP E L L + F + S I +
Sbjct: 319 AVTRKLLPPDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLG----- 373
Query: 180 PILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWKEN 239
E F+ + E+ K + S + PW +W E +D Y + ++ +R AW WK+
Sbjct: 374 --CQRREAFWKDHVFLEIVKAMKSERDPWNKWCEAMDSYCYLPEPDVSSLRDAWLDWKKQ 431
Query: 240 FRA 242
A
Sbjct: 432 RNA 434
>D8QP88_SELML (tr|D8QP88) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_63437 PE=3 SV=1
Length = 403
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Query: 60 ARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAV 119
A WL E D DR+ H+RKI +CSCG +++ + + + G SFM+HQIRKM+GTAV
Sbjct: 233 AYWLQELDPTDRITAQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAV 292
Query: 120 AVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESE 179
AV R L+P DI+ +SL + +RIVLP+AP E L L + F + S I +
Sbjct: 293 AVTRKLLPPDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLG----- 347
Query: 180 PILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAWRTWK 237
E F+ + E+ K + S + PW +W E +D Y + + +R AW WK
Sbjct: 348 --CQRREAFWKDHVFLEIVKAMRSERDPWNKWCEAMDSYCYLPEPNVSSLRDAWLDWK 403
>D8RMK1_SELML (tr|D8RMK1) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_97541 PE=3 SV=1
Length = 428
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 12/199 (6%)
Query: 59 RARWLYEPDEA-DRLNVSHFRKISQCSCGKLQRL-LGKDYVEIKIWGDSFMLHQIRKMVG 116
RA WL E +E D + SHFR +++C+C ++L V I++ G+SFM+HQIRKMVG
Sbjct: 230 RAYWLDESEEGKDPVKASHFRNVAKCTCEGPEKLNCPSSVVRIRVTGESFMVHQIRKMVG 289
Query: 117 TAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF--------SMRSSAGKFI 168
TA+AV R+++P D + +S + R+VLPLAPP L+L GN+F + G +
Sbjct: 290 TAIAVFRHVLPEDAIPVSTCRHARVVLPLAPPHGLVLSGNSFFPFRGGYTRAKGGTGGYF 349
Query: 169 RPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDE 228
++ V S+ I + F+ + P +S ++ ++PW +W+E L+ + D E
Sbjct: 350 FSKLGIQVSSQ-IAERMNSFWLEKLAPVISSSMNEEEAPWSQWLESLE-LNRIDDLEFAN 407
Query: 229 VRMAWRTWKENFRAKSASD 247
+R AW+ W+ + SD
Sbjct: 408 LRDAWKQWQNMATMRRYSD 426
>B9INP6_POPTR (tr|B9INP6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_574508 PE=4 SV=1
Length = 117
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 83/128 (64%), Gaps = 22/128 (17%)
Query: 114 MVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMV 173
M+GTAVAVKR + PRD++ LSL KF+RI+LPLAP EVLI RGN F + ++G+ RPEM
Sbjct: 1 MLGTAVAVKREIFPRDLIMLSLSKFSRIILPLAPTEVLISRGNDFPLIQNSGEGKRPEME 60
Query: 174 SLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRMAW 233
+VES EEF MLP W EWVE L KY+S A+LDEVR AW
Sbjct: 61 RMVES-------EEFS---MLP-----------LWKEWVENLHKYTS-VHAQLDEVRNAW 98
Query: 234 RTWKENFR 241
+ WKENF+
Sbjct: 99 KVWKENFQ 106
>E1ZUF7_CHLVA (tr|E1ZUF7) Putative uncharacterized protein OS=Chlorella
variabilis GN=CHLNCDRAFT_138514 PE=4 SV=1
Length = 346
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 58 VRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL---GKDYVEIKIWGDSFMLHQIRKM 114
V+ W +E D+AD + HFR I C G +L G+ + + + G SFMLHQIRKM
Sbjct: 154 VQVAWKFERDDADPIVRRHFRFIEWCRAGTELEVLVPGGQPCIHLSLQGSSFMLHQIRKM 213
Query: 115 VGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS--MRSSAGKFI---- 168
VG AVAV R +P ++L SL RI LPLAPP L+L G FS RS +G+
Sbjct: 214 VGMAVAVARGNLPLELLEFSLATPARINLPLAPPSTLMLTGALFSPFKRSWSGQAAVAAQ 273
Query: 169 -RPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELD 227
E++ L E + ++F MLP L L S + W W LD+ F +AE+
Sbjct: 274 WTGEVLQLKEQG--VAAQQQFLREAMLPALDSLLASEE--WRHWELDLDRL-WFDNAEVQ 328
Query: 228 EV 229
EV
Sbjct: 329 EV 330
>B9RVG5_RICCO (tr|B9RVG5) tRNA pseudouridine synthase OS=Ricinus communis
GN=RCOM_1135680 PE=3 SV=1
Length = 377
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 52 QNSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ- 110
Q + + ARWLYEPDE DR+ SHFRKI +CSCGKL+ G D+VEI IWG+SFMLHQ
Sbjct: 300 QQYNAGILARWLYEPDETDRIGASHFRKIFRCSCGKLETSKGFDFVEISIWGESFMLHQP 359
Query: 111 IRKMVGTAV 119
+ MV A+
Sbjct: 360 LLVMVQVAI 368
>D8TRD2_VOLCA (tr|D8TRD2) Putative uncharacterized protein OS=Volvox carteri
GN=VOLCADRAFT_104122 PE=4 SV=1
Length = 669
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 57 VVRARWLYEP--DEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIR 112
V RWLYE D+ DR+ V HFR I+ + L+ G V +++ G SFMLHQIR
Sbjct: 441 VQSCRWLYEKSEDKRDRVTVRHFRTITSFTADDPAPLVPGGVPCVRLRVRGMSFMLHQIR 500
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 158
M+G A+AV R +P +L SL R+ +P APP LIL G TF
Sbjct: 501 HMIGGALAVARGSLPLPLLRASLAGQARVTVPRAPPHTLILAGCTF 546
>D8TUP7_VOLCA (tr|D8TUP7) Putative uncharacterized protein OS=Volvox carteri
GN=VOLCADRAFT_90550 PE=4 SV=1
Length = 738
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 30/176 (17%)
Query: 61 RWLYEPDEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIRKMVGTA 118
+W E D DR+ +++R+I + + L+ G + +++ G SFMLH IR M+G A
Sbjct: 521 QWQMEMDPRDRVTQTYYRRIHHFTAADPRPLVEGGTPCLLLEVRGQSFMLHHIRHMIGGA 580
Query: 119 VAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVES 178
VAV L+P+D+L SL R+ +P APP L+L TF G+F P+ ++
Sbjct: 581 VAVALGLMPKDVLLGSLEPPARVAIPRAPPHTLLLADCTF------GRF--PQQCGPGDN 632
Query: 179 EPILNEV---------------EEFYTSVMLPELSKFLDSSKSPWVEWVERL-DKY 218
+ L V E+F SV+LP L + ++ ++ W EW L D Y
Sbjct: 633 D--LRNVTGVRLSVRAGGQQRREDFRRSVLLPALQQLVELAE--WGEWKASLYDTY 684
>K8F680_9CHLO (tr|K8F680) Uncharacterized protein OS=Bathycoccus prasinos
GN=Bathy16g02100 PE=4 SV=1
Length = 593
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 62 WLYEPDEADRLNVSHFRKISQCSCGK----LQRLLGKDYVEIKIWGDSFMLHQIRKMVGT 117
WL E D D ++V H+R+I + +C K ++ +V +K++G+SFMLHQIRKM+ T
Sbjct: 365 WLLEKDVDDLVHVMHYRRIHEFTCSKEPEIIEGFESYPFVRVKVYGESFMLHQIRKMIAT 424
Query: 118 AVAVKRN-----LIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF 158
AV V + +P + SL + R+V P+APP L L G F
Sbjct: 425 AVLVALDSEETPTMPLSFIKASLCRPCRVVTPMAPPLTLFLTGAEF 470
>A8J7Q4_CHLRE (tr|A8J7Q4) tRNA pseudouridine synthase (Fragment) OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_175853 PE=3 SV=1
Length = 446
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 61 RWLYEPDEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIRKMVGTA 118
RW E D DR+ + +R+I + + ++ G+ + +++ G SFMLH IR M+G A
Sbjct: 241 RWQTEVDPRDRITQTFYRRIYSFTAADPKPMVEGGEPCLLLEVSGQSFMLHHIRHMIGAA 300
Query: 119 VAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS---MRSSAG----KFIRPE 171
VAV LI +++L SL R+ LP APP L+L +F + G + I E
Sbjct: 301 VAVTLGLISKEVLLGSLTPPARVTLPRAPPHTLLLSDCSFGRFPAQQGPGDNDLRNITGE 360
Query: 172 MVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEVRM 231
+SL E E F V+LP L + + + W +W + + F + V
Sbjct: 361 RLSLREGG--QQRKEAFRNEVLLPALQQLVALPE--WQQWKASMYQVFPFPEVARSRVAA 416
Query: 232 AWRTWKENFRAKSAS 246
R FRAK +
Sbjct: 417 GARCAVTWFRAKRGA 431
>I0Z2B4_9CHLO (tr|I0Z2B4) tRNA pseudouridine synthase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_14273 PE=3 SV=1
Length = 391
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 57 VVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLL--GKDYVEIKIWGDSFMLHQIRKM 114
V W E DEAD + SHFR I + L+ G +++ G SFMLHQIR M
Sbjct: 187 VTAGAWNEERDEADPITRSHFRHIFSATADDPTPLVPGGTPCIKVVFSGQSFMLHQIRHM 246
Query: 115 VGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 153
+G AVAV R IP D + L +R ++PLAPP VL+L
Sbjct: 247 IGAAVAVARGTIPLDYVEGCLRSPSRAIMPLAPPHVLVL 285
>F0WUQ6_9STRA (tr|F0WUQ6) Ubiquitin fusion degradation protein putative OS=Albugo
laibachii Nc14 GN=AlNc14C277G10063 PE=4 SV=1
Length = 585
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 76 HFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSL 135
H R + QC ++ G+ YV++ I G +F+LHQIR M+G A++ + I + SL
Sbjct: 309 HRRAVYQCRGSLIEDFYGEPYVKVHITGQAFLLHQIRCMIGGAISFATDAISSTVFEASL 368
Query: 136 IKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEV---------- 185
+ +P+AP E L+LR N+F + +R P ++ V
Sbjct: 369 YTDQIVRIPIAPAEGLLLRSNSFGGKRHRVSLVRDWNTDFSTDSPSVHRVLLSDREAALA 428
Query: 186 EEFYTSVMLPELS---KFLDSSKSPWVEWVERL 215
E F V+ E++ K L S +PW W E L
Sbjct: 429 ETFRHEVIYREIAAAWKNLKGSAAPWEAWSEYL 461
>A4S8M4_OSTLU (tr|A4S8M4) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_27900 PE=4 SV=1
Length = 556
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 62 WLYEPDEADRLNVSHFRKISQCSCGK-LQRL----------LGKDYVEIKIWGDSFMLHQ 110
WLYE D D++ SHFR+I + G ++R+ + ++ + + G+SFML+Q
Sbjct: 343 WLYESDPNDKIGPSHFRRIHNFTAGADVERMEITNDDGSKTTSEPFIRVSVRGESFMLYQ 402
Query: 111 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRP 170
IRKM+ +AVAV P + L SL + R +PLAP L L F +P
Sbjct: 403 IRKMIASAVAVSLGHCPLEFLPASLSRPCRAAMPLAPASTLYLYDVEFMKFRVNHDPSQP 462
Query: 171 EMVSLVE-SEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVERLDKYSSFADAELDEV 229
+ +E SE + ++ F + P L+ L + + W ++ E L + + + D +
Sbjct: 463 NRLERLEPSESVRADLARFQREKLEPALAPALLNDE--WDDFKENLKQGNVTPELSRD-I 519
Query: 230 RMAWRTWKEN 239
A+ T+K N
Sbjct: 520 LAAYETYKAN 529
>Q00TY6_OSTTA (tr|Q00TY6) PUSH_ARATH Putative tRNA pseudouridine synthase (ISS)
OS=Ostreococcus tauri GN=Ot16g02650 PE=4 SV=1
Length = 543
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 62 WLYEPDEADRLNVSHFRKISQCSCG-KLQRLL----------GKDYVEIKIWGDSFMLHQ 110
WL E D D++ SHFR+I S G +++R+ + +V + + G+SFML+Q
Sbjct: 339 WLLESDWTDKITQSHFRRIHNFSAGSEVERMTITNEDGSTTQSEPFVRVSVRGESFMLYQ 398
Query: 111 IRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTF-SMRSSAGKFIR 169
IRKM+ +AVAV P + L SL + R +PLAP L L F + R + +
Sbjct: 399 IRKMIASAVAVSLGHCPLEFLPASLARPCRAAMPLAPASTLYLYDVEFMNFRVNTESSVE 458
Query: 170 P--EMVSLVESEPILNEVEEFYTSVMLPELSKFLDS 203
P + L SE + ++ F + P L+ L S
Sbjct: 459 PPNRLTKLEPSEAVREDLARFRRDKLEPALAPALAS 494
>I1ICG1_BRADI (tr|I1ICG1) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI3G51240 PE=4 SV=1
Length = 586
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ RL G D+V ++ G SFMLHQIRKMVG AVAV RN P I ++ K R+ +P A
Sbjct: 424 RVVRLDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDIRLNVPTA 483
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
P L L F+ ++ K E VS+ EP E EEF + P ++
Sbjct: 484 PEVGLHLDECMFTSYNAKWKDTH-EAVSI---EPYAEEAEEFKVKYIFPHIA 531
>M4EAK5_BRARP (tr|M4EAK5) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra025814 PE=4 SV=1
Length = 521
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L GKD+V+ ++ G SFMLHQIRKM+G AVAV RN P ++ + K RIV+P+AP
Sbjct: 325 LGGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESVIQTAFKKDVRIVVPMAPEVG 384
Query: 151 LIL 153
L L
Sbjct: 385 LYL 387
>C1N6F4_MICPC (tr|C1N6F4) Predicted protein OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_63949 PE=4 SV=1
Length = 419
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 62 WLYEPDEADRLNVSHFRKISQCSCGKLQ---------RLLGKDYVEIKIWGDSFMLHQIR 112
WL D+ D + H R +S + G ++ G+ +V + + GDSF+L+QIR
Sbjct: 175 WLLGRDDRDLVGKRHARVVSSFTAGDVEVAAGDGDDDDRPGEPFVRVVVAGDSFVLYQIR 234
Query: 113 KMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLILRGNTFS 159
KM+ TAV V IPR+ + ++L + R P+AP L LR FS
Sbjct: 235 KMIATAVGVALGWIPREFIPVTLARPARAATPIAPASTLYLREAEFS 281
>F2EAU5_HORVD (tr|F2EAU5) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 572
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKMVG AVAV RN P I ++ K R+ +P AP
Sbjct: 414 LDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDIRLNVPTAPEVG 473
Query: 151 LILRGNTFSMRSSAGKFI-RPEMVSLVESEPILNEVEEFYTSVMLPELS 198
L L F+ +S K++ E VS+ EP E EEF + P ++
Sbjct: 474 LHLDECMFASYNS--KWMDTHEAVSI---EPYAEEAEEFKIKYIFPHIA 517
>Q9LN29_ARATH (tr|Q9LN29) F14O10.3 protein OS=Arabidopsis thaliana GN=F14O10.3
PE=2 SV=1
Length = 549
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L GKD+V+ ++ G SFMLHQIRKM+G AVA+ RN P ++ S K RI +P+AP
Sbjct: 363 LDGKDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIEASFKKDVRINVPMAPEVG 422
Query: 151 LIL 153
L L
Sbjct: 423 LYL 425
>M7ZNB9_TRIUA (tr|M7ZNB9) tRNA pseudouridine synthase A, mitochondrial
OS=Triticum urartu GN=TRIUR3_08588 PE=4 SV=1
Length = 575
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKMVG AVAV RN P I ++ K R+ +P AP
Sbjct: 417 LDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDIRLNVPTAPEVG 476
Query: 151 LILRGNTFSMRSSAGKFI-RPEMVSLVESEPILNEVEEFYTSVMLPELS 198
L L F+ +S K++ E VS+ EP E EEF + P ++
Sbjct: 477 LHLDECMFTSYNS--KWMDTHEAVSI---EPYAEEAEEFKIKYIFPHIA 520
>N1R2D7_AEGTA (tr|N1R2D7) tRNA pseudouridine synthase A OS=Aegilops tauschii
GN=F775_09156 PE=4 SV=1
Length = 585
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKMVG AVAV RN P I ++ K R+ +P AP
Sbjct: 410 LDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDIRLNVPTAPEVG 469
Query: 151 LILRGNTFSMRSSAGKFI-RPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWV 209
L L F+ +S K++ E VS+ EP E EEF + P ++ ++ +
Sbjct: 470 LHLDECMFTSYNS--KWMDTHEAVSI---EPYAEEAEEFKIKYIFPHIAA-MEHKEGAVA 523
Query: 210 EWVERLD 216
W+ L+
Sbjct: 524 LWLHSLN 530
>K3YRG0_SETIT (tr|K3YRG0) Uncharacterized protein OS=Setaria italica
GN=Si016854m.g PE=4 SV=1
Length = 538
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKM+G AVAV RN P I ++ K ++ +P AP
Sbjct: 368 LDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVKLNVPTAPEVG 427
Query: 151 LILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 428 LYLDECMFTSYNKKWKDSH-EAVSM---EPYCEEAEEFKVKYIFPHIA 471
>D7KJ05_ARALL (tr|D7KJ05) tRNA pseudouridine synthase family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472264
PE=4 SV=1
Length = 557
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L GKD+V+ ++ G SFMLHQIRKM+G AVAV RN P ++ + K RI +P+AP
Sbjct: 361 LDGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESLIETAFKKDVRINVPMAPEVG 420
Query: 151 LIL 153
L L
Sbjct: 421 LYL 423
>R0GW67_9BRAS (tr|R0GW67) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008701mg PE=4 SV=1
Length = 574
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L GKD+V+ ++ G SFMLHQIRKM+G AVAV RN P ++ + K RI +P+AP
Sbjct: 378 LDGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPETLIETAFKKDVRINVPMAPEVG 437
Query: 151 LIL 153
L L
Sbjct: 438 LYL 440
>D7KJ10_ARALL (tr|D7KJ10) tRNA pseudouridine synthase family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889487
PE=4 SV=1
Length = 571
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L GKD+++ ++ G SFMLHQIRKM+G AVAV RN P ++ + K RI +P+AP
Sbjct: 375 LDGKDFIKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESLIETAFKKDVRINVPMAPEVG 434
Query: 151 LIL 153
L L
Sbjct: 435 LYL 437
>K4B5X8_SOLLC (tr|K4B5X8) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc02g043870.1 PE=4 SV=1
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 53 NSSLVVRARWLYEPDEADRLNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQ 110
NS++ ++ARWL+E D D+LN +HFR+I C KL+ LL +YVE+ I G+SF LHQ
Sbjct: 87 NSAIPIQARWLHESDVRDKLNSAHFRRIFHRHCEKLENLLDINYVEVSICGESFTLHQ 144
>C5Y1C3_SORBI (tr|C5Y1C3) Putative uncharacterized protein Sb04g032290 OS=Sorghum
bicolor GN=Sb04g032290 PE=4 SV=1
Length = 567
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P AP
Sbjct: 396 LDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPETIYDVAFRKDVNLNVPTAPEVG 455
Query: 151 LILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 456 LYLDECMFTSYNKKWKDSH-EAVSM---EPYYEEAEEFKVKYIFPHIA 499
>D8SSE2_SELML (tr|D8SSE2) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_44320 PE=3 SV=1
Length = 363
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R I+ G++ + G +V + G SFMLHQIRKM+G AVAV R P I + +
Sbjct: 224 RYITSYEAGEVFTIQGCKFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRR 283
Query: 138 FTRIVLPLAPPEVLILRGNTFSMRSS--AGKFIRPEMVSLVESEPILNEVEEFYTSVMLP 195
T+I +P+AP L L ++ + AG E VSL E E+ EF T V+ P
Sbjct: 284 DTKIGVPMAPELGLFLDECLYTAYNQRFAGSH---EEVSLKSFE---KEIAEFKTEVIYP 337
Query: 196 ELSKFLDSSKSPWVEWVERLDK 217
++ ++ + W+ L K
Sbjct: 338 HIAS-TEAKDGVFARWLHGLTK 358
>D8SNZ9_SELML (tr|D8SNZ9) tRNA pseudouridine synthase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_44317 PE=3 SV=1
Length = 363
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R I+ G++ + G +V + G SFMLHQIRKM+G AVAV R P I + +
Sbjct: 224 RYITSYEAGEVFTIQGCKFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRR 283
Query: 138 FTRIVLPLAPPEVLILRGNTFSMRSS--AGKFIRPEMVSLVESEPILNEVEEFYTSVMLP 195
T+I +P+AP L L ++ + AG E VSL E E+ EF T V+ P
Sbjct: 284 DTKIGVPMAPELGLFLDECLYTAYNQRFAGSH---EEVSLKSFE---KEIAEFKTEVIYP 337
Query: 196 ELSKFLDSSKSPWVEWVERLDK 217
++ ++ + W+ L K
Sbjct: 338 HIAS-TEAKDGVFARWLHGLTK 358
>C1EHS5_MICSR (tr|C1EHS5) Predicted protein OS=Micromonas sp. (strain RCC299 /
NOUM17) GN=MICPUN_104259 PE=4 SV=1
Length = 601
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 62 WLYEPDEADRLNVSHFRKISQCSCGKLQRLLG-KD---YVEIKIWGDSFMLHQIRKMVGT 117
WL D+AD + V H RK++ G KD +V + + GDSFML+QIRKM+ T
Sbjct: 362 WLKARDDADLVGVKHARKVNSFIAADPAVAAGHKDAPPFVRVTVNGDSFMLYQIRKMIAT 421
Query: 118 AVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLIL 153
AVA P +++ SL + RI P+AP L L
Sbjct: 422 AVAAAIGHFPLELIPASLTRPARIATPIAPASTLYL 457
>Q6ESS0_ORYSJ (tr|Q6ESS0) Os02g0668400 protein OS=Oryza sativa subsp. japonica
GN=P0684A08.2 PE=4 SV=1
Length = 581
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ L G D++ ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P A
Sbjct: 419 RVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTA 478
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
P L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 479 PEVGLYLDECMFTSYNKKWKDSH-EAVSM---EPYSEEAEEFKLKYIFPHIA 526
>I1P2Z2_ORYGL (tr|I1P2Z2) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 581
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ L G D++ ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P A
Sbjct: 419 RVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTA 478
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
P L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 479 PEVGLYLDECMFTSYNKKWKDSH-EAVSM---EPYSEEAEEFKLKYIFPHIA 526
>B8AGD8_ORYSI (tr|B8AGD8) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_08404 PE=2 SV=1
Length = 581
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ L G D++ ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P A
Sbjct: 419 RVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTA 478
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
P L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 479 PEVGLYLDECMFTSYNKKWKDSH-EAVSM---EPYSEEAEEFKLKYIFPHIA 526
>E9GZJ2_DAPPU (tr|E9GZJ2) tRNA pseudouridine synthase (Fragment) OS=Daphnia pulex
GN=DAPPUDRAFT_12957 PE=3 SV=1
Length = 319
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R I+Q SCG + ++V+I I G SFMLHQIRKM+G ++V R +PR+IL + K
Sbjct: 177 RYITQFSCGDPFMIKEVEFVKITIKGQSFMLHQIRKMIGLTISVMRGFVPREILDKAF-K 235
Query: 138 FTRIVLPLAPPEVLIL 153
R+ +P AP L+L
Sbjct: 236 MERVNVPTAPSLNLLL 251
>A3A9Y8_ORYSJ (tr|A3A9Y8) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_07867 PE=2 SV=1
Length = 518
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ L G D++ ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P A
Sbjct: 356 RVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTA 415
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELS 198
P L L F+ + K E VS+ EP E EEF + P ++
Sbjct: 416 PEVGLYLDECMFTSYNKKWKDSH-EAVSM---EPYSEEAEEFKLKYIFPHIA 463
>J3LFN9_ORYBR (tr|J3LFN9) tRNA pseudouridine synthase OS=Oryza brachyantha
GN=OB02G34560 PE=3 SV=1
Length = 386
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
++ L G D++ ++ G SFMLHQIRKMVG AVAV RN P I ++ K + +P A
Sbjct: 224 RVVSLDGIDFIRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDVNLNVPTA 283
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEF 188
P L L FS + K E VS+ EP E EEF
Sbjct: 284 PEVGLYLDECMFSSYNKKWKDSH-EAVSM---EPYSEEAEEF 321
>A7ASP1_BABBO (tr|A7ASP1) tRNA pseudouridine synthase OS=Babesia bovis
GN=BBOV_IV012080 PE=3 SV=1
Length = 414
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 92 LGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVL 151
+G + V + I G SF+ +QIRKM+G AV + PR + +L K+ + PLAP E L
Sbjct: 266 IGINAVRVIITGQSFLYNQIRKMIGLGYAVYLGVAPRCAIKFALSKWHAVNTPLAPAEGL 325
Query: 152 ILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEW 211
L F + + P +E + I + VE F + + PE++ ++ W W
Sbjct: 326 FLHHPYF---DAYNRRCSPPQTPFIEYDDIESSVENFKRTRIYPEIASTFET--DVWKTW 380
Query: 212 VERL 215
+E+L
Sbjct: 381 MEKL 384
>Q4N6R8_THEPA (tr|Q4N6R8) tRNA pseudouridine synthase OS=Theileria parva
GN=TP01_1102 PE=3 SV=1
Length = 475
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 87 KLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLA 146
KLQ L D V+I I G SF+ +QIRKM+ A+ V + P++ L SL K + + L
Sbjct: 336 KLQEL---DVVKILIVGQSFLYNQIRKMISLALQVYLKIAPKNSLEFSLNKSHILNINLV 392
Query: 147 PPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKS 206
P E LIL F ++ P V +E + + +VEEF + PE+ + +DS
Sbjct: 393 PSEGLILHHPYFDHYNTNR--CNPPEVPYIEYKDVKPKVEEFKREHIYPEVKRSIDS--D 448
Query: 207 PWVEWVERLDKYSSFADAEL 226
W W+E + KY + + L
Sbjct: 449 LWEGWLETILKYPFYLENNL 468
>M5Y523_PRUPE (tr|M5Y523) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa004469mg PE=4 SV=1
Length = 508
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
+ G D+V+ ++ G SFMLHQIRKM+G AVA+ RN P +L ++L K + +P AP
Sbjct: 357 IGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPESLLEIALQKDVNVNVPTAPEVG 416
Query: 151 LIL 153
L L
Sbjct: 417 LYL 419
>B9R8H6_RICCO (tr|B9R8H6) Pseudouridylate synthase, putative OS=Ricinus communis
GN=RCOM_1599840 PE=4 SV=1
Length = 584
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVA+ RN P ++S +L K +I +P AP L
Sbjct: 402 GIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLY 461
Query: 153 L 153
L
Sbjct: 462 L 462
>A5AJY9_VITVI (tr|A5AJY9) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_031845 PE=4 SV=1
Length = 559
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVA+ RN+ P +L +L+K I +P AP L
Sbjct: 413 GIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLY 472
Query: 153 LRGNTFS 159
L FS
Sbjct: 473 LDECFFS 479
>C0P5B5_MAIZE (tr|C0P5B5) Uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 562
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P AP
Sbjct: 391 LDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVG 450
Query: 151 LILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEF 188
L L F+ + K E VS+ EP E EEF
Sbjct: 451 LYLDECMFTSYNKKWKDSH-EAVSM---EPYSEEAEEF 484
>F6H0D1_VITVI (tr|F6H0D1) tRNA pseudouridine synthase OS=Vitis vinifera
GN=VIT_18s0001g00580 PE=3 SV=1
Length = 488
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVA+ RN+ P +L +L+K I +P AP L
Sbjct: 342 GIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLY 401
Query: 153 LRGNTFS 159
L FS
Sbjct: 402 LDECFFS 408
>M4DH09_BRARP (tr|M4DH09) tRNA pseudouridine synthase OS=Brassica rapa subsp.
pekinensis GN=Bra015786 PE=3 SV=1
Length = 442
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+++ ++ G SFMLHQIRKM+G AVA+ RN P +++ + K I +P+AP
Sbjct: 267 LDGIDFIKCEVLGQSFMLHQIRKMMGLAVAIMRNCAPESLINTAFSKDVNITVPMAPEVG 326
Query: 151 LIL 153
L L
Sbjct: 327 LYL 329
>M0RSV4_MUSAM (tr|M0RSV4) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 572
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVAV RN P ++ ++L K I +P AP L
Sbjct: 421 GIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDIALKKDVNINVPTAPEVGLY 480
Query: 153 L 153
L
Sbjct: 481 L 481
>A9TRH5_PHYPA (tr|A9TRH5) tRNA pseudouridine synthase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_197512 PE=3 SV=1
Length = 499
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R I + GK+ + G +V + G SFMLHQIRKM+GTA+A+ R +P I+ +L
Sbjct: 350 RYIISFTAGKVIEVQGMQFVPCTVVGQSFMLHQIRKMIGTAIAIMRGCVPDSIIDFALQS 409
Query: 138 FTRIVLPLAPPEVLIL 153
+ P+AP L L
Sbjct: 410 KNDVNTPMAPELGLFL 425
>I0Z8C0_9CHLO (tr|I0Z8C0) tRNA pseudouridine synthase (Fragment) OS=Coccomyxa
subellipsoidea C-169 GN=COCSUDRAFT_6187 PE=3 SV=1
Length = 314
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R I C L G+ +V + + G SFMLHQIRK+VGTAVAV R + D ++L+L
Sbjct: 184 RYILSFKCAGTMNLEGQQWVRMVVVGQSFMLHQIRKLVGTAVAVMRGVATPDAITLALDP 243
Query: 138 FTRIVLPLAPPEVLIL 153
+V P+AP L L
Sbjct: 244 ARVVVTPMAPELGLFL 259
>H3B8J2_LATCH (tr|H3B8J2) tRNA pseudouridine synthase (Fragment) OS=Latimeria
chalumnae PE=3 SV=1
Length = 330
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 75 SHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLS 134
S R + CG+ G +Y I+I G SFM HQIRKMV AVAV + P IL+ S
Sbjct: 186 SAVRYVMSACCGEPFFYGGLEYAIIEIKGQSFMRHQIRKMVALAVAVAKGWAPEPILAES 245
Query: 135 LIKFTRIVLPLAPPEVLILRGNTFSMRSS-AGKFIRPEMVSLVESEPILNEVEE--FYTS 191
L ++ LP P L+L F ++ G+ + +S E EP++ E +E Y S
Sbjct: 246 LSS-EKVHLPRVPGLGLVLERVHFDRHNARYGQNGIHQRISWEEVEPLMMEFKERQIYPS 304
Query: 192 VMLPELSKFLDSSKSPWVEWVERLDKYS 219
V+ EL + +W+E+L ++S
Sbjct: 305 VVRVEL------EEKSMAKWLEKLARHS 326
>M1AM30_SOLTU (tr|M1AM30) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400009961 PE=4 SV=1
Length = 569
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G D+V+ ++ G SFMLHQIRKM+G AVA+ RN P ++ + + I +P+AP L
Sbjct: 335 GIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLY 394
Query: 153 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEF 188
L F+ +S K E VSL + L E EEF
Sbjct: 395 LDECFFTSYNSKWKDTHEE-VSL---KAYLEEAEEF 426
>G7JGU0_MEDTR (tr|G7JGU0) Uncharacterized protein OS=Medicago truncatula
GN=MTR_4g131270 PE=2 SV=1
Length = 530
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ +I G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 153 L 153
L
Sbjct: 435 L 435
>B7FLC8_MEDTR (tr|B7FLC8) Uncharacterized protein OS=Medicago truncatula PE=2
SV=1
Length = 530
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ +I G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 153 L 153
L
Sbjct: 435 L 435
>G7JGT6_MEDTR (tr|G7JGT6) tRNA pseudouridine synthase OS=Medicago truncatula
GN=MTR_4g131220 PE=4 SV=1
Length = 530
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ +I G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 153 L 153
L
Sbjct: 435 L 435
>G7JGT4_MEDTR (tr|G7JGT4) tRNA pseudouridine synthase OS=Medicago truncatula
GN=MTR_4g131200 PE=3 SV=1
Length = 361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ +I G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 206 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 265
Query: 153 L 153
L
Sbjct: 266 L 266
>B6TLN6_MAIZE (tr|B6TLN6) tRNA pseudouridine synthase family protein OS=Zea mays
PE=2 SV=1
Length = 561
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 91 LLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEV 150
L G D+V ++ G SFMLHQIRKM+G AVAV RN P I ++ K + +P AP
Sbjct: 390 LDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVIRNCAPESIYDVAFRKDVNLNVPTAPEVG 449
Query: 151 LILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEF 188
L L F+ + K + V EP E EEF
Sbjct: 450 LYLDECMFTSYNKKWK----DSHEAVFMEPYSEEAEEF 483
>B9GQ56_POPTR (tr|B9GQ56) tRNA pseudouridine synthase OS=Populus trichocarpa
GN=POPTRDRAFT_815980 PE=3 SV=1
Length = 429
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 287 GIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVGLY 346
Query: 153 L 153
L
Sbjct: 347 L 347
>M2XVR2_GALSU (tr|M2XVR2) tRNA pseudouridine synthase A OS=Galdieria sulphuraria
GN=Gasu_49530 PE=3 SV=1
Length = 943
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G+ ++ + + G SF+LHQIRKM+G A+AV + IP++ ++SL K R+ P+AP L
Sbjct: 285 GESFLNVTVVGQSFLLHQIRKMIGLAIAVSKGWIPKEAFNVSLSKHHRLETPMAPSLGLF 344
Query: 153 L 153
L
Sbjct: 345 L 345
>F6Y8V2_XENTR (tr|F6Y8V2) tRNA pseudouridine synthase (Fragment) OS=Xenopus
tropicalis GN=LOC100490752 PE=3 SV=1
Length = 321
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 75 SHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLS 134
S FR + SC + G ++ +I I G SFML+QIRKMVG +A+ + ++P D L
Sbjct: 180 SSFRHMLDVSCSEPFVFHGTEFAQIHITGQSFMLYQIRKMVGLIIAIAQGIVPADFLPQC 239
Query: 135 LIKFTRIVLPLAPPEVLILRGNTF---SMRSSAGKFIRPEMVSLVESEPILNEVEEFYTS 191
+ + +I +P AP L+L F + R F +P +S +S P V F+
Sbjct: 240 MQR-EKINIPPAPGLGLVLERVHFDWYNKRYGGDGFHQP--ISWEKSMP---TVSVFWEE 293
Query: 192 VMLPEL--SKFLDSSKSPWVEWVER 214
+LP++ + + S S W+E + R
Sbjct: 294 RILPDILEGELENLSMSYWIEKLNR 318
>I7I969_BABMI (tr|I7I969) tRNA pseudouridine synthase OS=Babesia microti strain
RI GN=BBM_III01585 PE=3 SV=1
Length = 455
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 72 LNVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDIL 131
LN + +R I+ +++ + +++V + I G SF+ +QIRKM+ A+ V R P++ +
Sbjct: 268 LNPASYRYINSIKVSRVECM--ENFVRVSIQGQSFLFNQIRKMIAVAIEVFRGSAPKNAI 325
Query: 132 SLSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIR--PEMVSLVESEPILNEVEEFY 189
L K + + AP + L L F + F R P + E + + +F
Sbjct: 326 KYCLNKLHSVNVNTAPAQGLFLHHPNFDTYN----FHRASPPQTKHILFEDVKEQAMQFI 381
Query: 190 TSVMLPELSKFLDSSKSPWVEWVERLDKY 218
+ PE+ K+ W EW+E +++Y
Sbjct: 382 KQRIYPEILKY-----DKWHEWLETINEY 405
>D7KT99_ARALL (tr|D7KT99) tRNA pseudouridine synthase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476762 PE=3 SV=1
Length = 458
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R+I + + L G D+++ ++ G SFMLHQIRKM+G AVA+ RN ++ + K
Sbjct: 305 RQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQTAFSK 364
Query: 138 FTRIVLPLAPPEVLIL 153
I +P+AP L L
Sbjct: 365 DVNITVPMAPEVGLYL 380
>Q54FA0_DICDI (tr|Q54FA0) tRNA pseudouridylate synthase OS=Dictyostelium
discoideum GN=pus1 PE=4 SV=1
Length = 596
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 21/159 (13%)
Query: 73 NVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILS 132
+VS FRKI C + L G + V I + G+SFMLHQIRKM+G ++ R + D +
Sbjct: 328 DVSVFRKIHSFVCSEPFVLEGVEMVSINVVGESFMLHQIRKMIGCLISFIRKGMFEDCET 387
Query: 133 L------------SLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEP 180
S + T + LP+AP L+L F+ + I E+ +ES+
Sbjct: 388 RDQAFDQIKAYINSTFEHTPLNLPMAPGAGLLLDYCIFNEWNKNNSSIHGELK--IESD- 444
Query: 181 ILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVER-LDKY 218
+VEEF ++ E++ L+S+K + W+E+ LD Y
Sbjct: 445 ---QVEEFKKTIYR-EIA-LLESTKKEFKNWIEKNLDPY 478
>Q4UIU5_THEAN (tr|Q4UIU5) tRNA pseudouridine synthase OS=Theileria annulata
GN=TA16330 PE=3 SV=1
Length = 478
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 73 NVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILS 132
N S F K+Q L + V+I I G SF+ +QIRKM+ A+ V + P++ +
Sbjct: 325 NTSRFIHKISIKSHKIQEL---EVVKILIVGQSFLYNQIRKMISLALQVYLGIAPKNSVE 381
Query: 133 LSLIKFTRIVLPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSV 192
SL K + + L P E LIL F S P V +E + + +VE F
Sbjct: 382 FSLNKSHFLNINLVPSEGLILHHPYFD--SYNMNRCNPPEVPYIEYKDVKTKVEGFKNKY 439
Query: 193 MLPELSKFLDSSKSPWVEWVERLDKYSSFAD 223
+ PE+ K ++S W W+E + KY + +
Sbjct: 440 IYPEVKKSMES--DLWEGWLENILKYPFYLE 468
>E5GCD2_CUCME (tr|E5GCD2) tRNA pseudouridine synthase family protein OS=Cucumis
melo subsp. melo PE=4 SV=1
Length = 519
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V+ ++ G SFMLHQIRKM+G AVA+ RN P ++ +L K I +P AP L
Sbjct: 371 GIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLY 430
Query: 153 L 153
L
Sbjct: 431 L 431
>D0NH89_PHYIT (tr|D0NH89) Ubiquitin fusion degradation protein, putative
OS=Phytophthora infestans (strain T30-4) GN=PITG_10857
PE=4 SV=1
Length = 840
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 76 HFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSL 135
H R I CS + G+ ++ I I G +F+L+QIR MVG A+AV + R +L
Sbjct: 234 HRRSIYSCSGSLVPDFCGEPHLRIHIVGQAFLLNQIRCMVGGALAVATKGMSRVEFDAAL 293
Query: 136 IKFTRIVLPLAPPEVLILRGNTFSMRS-SAGKFIRPEMVSLVESEPILN----------E 184
+ + +P+AP E L+L ++F +S + + P V E + +++ E
Sbjct: 294 LTNRIVRVPIAPAEGLVLLSSSFGGKSHTVSLYEDPNTVLAKERKDVVHRVLLNRKEDEE 353
Query: 185 VEEFYTSVMLPELSKF--LDSSKSPWVEWVERLDKYSSFADA--------ELDEVRMAWR 234
+ +F V+ E++ +D W ++ER + + D ELD+ ++A +
Sbjct: 354 MTKFRDEVIYKEIASSWDMDEKMDRWRAYLERCYESNGRLDEDELSAVLFELDQAKLATK 413
Query: 235 TWKENF 240
+ F
Sbjct: 414 NKNQAF 419
>E2B4B1_HARSA (tr|E2B4B1) tRNA pseudouridine synthase OS=Harpegnathos saltator
GN=EAI_06060 PE=3 SV=1
Length = 364
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G ++V +++ G SFMLHQIRKMV T +AV RN+IP + ++ + K ++ +P+AP L
Sbjct: 206 GIEFVVLEVKGQSFMLHQIRKMVATVIAVARNIIPEETINEAF-KTVKMEIPIAPSLGLC 264
Query: 153 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDS--SKSPWVE 210
L + + A ++ M ++ + EVE+F + L +D+ S++ +
Sbjct: 265 LCHVHYD--NYAKRYGTDGMHETLDWKECEEEVEKFQKEYI---LQYIIDTEISENTALN 319
Query: 211 WVERLDKYSSFADAE 225
W+ L +Y SF++ E
Sbjct: 320 WIATLPEY-SFSNIE 333
>Q9SGS1_ARATH (tr|Q9SGS1) tRNA pseudouridine synthase OS=Arabidopsis thaliana
GN=AT1G76120 PE=2 SV=1
Length = 463
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 78 RKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIK 137
R+I + + L G D+++ ++ G SFMLHQIRKM+G AVA+ RN ++ + K
Sbjct: 297 RQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQSAFSK 356
Query: 138 FTRIVLPLAPPEVLIL 153
I +P+AP L L
Sbjct: 357 DVNITVPMAPEVGLYL 372
>F0ZAZ5_DICPU (tr|F0ZAZ5) tRNA pseudouridine synthase OS=Dictyostelium purpureum
GN=DICPUDRAFT_45589 PE=3 SV=1
Length = 473
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 73 NVSHFRKISQCSCGKLQRLLGKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILS 132
+VS FRKI + C L G + V I + G+SFMLHQIRKM+G ++ R I +D
Sbjct: 242 DVSVFRKIIKFECSVPFILEGVEMVSINVIGESFMLHQIRKMIGCLMSFMRKGIFQDAQD 301
Query: 133 L-----SLIKFTRIV-------LPLAPPEVLILRGNTFSMRSSAGKFIRPEMVSLVESEP 180
+ K+ LP+AP L+L F M + K I E+ +VE+
Sbjct: 302 KESAFDQIRKYIEATFYHQPLNLPVAPGAGLLLDHCIFRMWNEKYKDIHGEL--MVEN-- 357
Query: 181 ILNEVEEFYTSVMLPELSKFLDSSKSPWVEWVE-RLDKY 218
++VE+F V+ E++ L+++K + EW+E +LD +
Sbjct: 358 --DDVEQF-RKVVFGEIAS-LEATKREFSEWIETKLDPH 392
>J9KAK1_ACYPI (tr|J9KAK1) tRNA pseudouridine synthase OS=Acyrthosiphon pisum PE=3
SV=1
Length = 441
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 93 GKDYVEIKIWGDSFMLHQIRKMVGTAVAVKRNLIPRDILSLSLIKFTRIVLPLAPPEVLI 152
G + + + + G SFMLHQIRKMVG +A+ R + D++ + + R+ LP+AP L+
Sbjct: 253 GVELISLYVRGQSFMLHQIRKMVGVIIAICRGVAKHDVIERAW-QPDRLDLPIAPGLGLV 311
Query: 153 LRGNTFSMRSSAGKFIRPEMVSLVESEPILNEVEEFYTSVMLPELSKFLDSSKSPWVEWV 212
L + + GKF M ++ + ++V EF +LP + K ++ +S W+
Sbjct: 312 LEEVHYDKYN--GKFGNDGMHERLDFVELNDQVSEFRAKYILPTIIK-VEKEESSMQLWL 368
Query: 213 ERL 215
E+L
Sbjct: 369 EQL 371