Miyakogusa Predicted Gene
- Lj0g3v0238439.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0238439.1 Non Chatacterized Hit- tr|B5U9W4|B5U9W4_LOTJA
Putative uncharacterized protein OS=Lotus japonicus
PE,50.77,0.000000001,Chromo domain-like,Chromo domain-like;
Chromo,Chromo domain; CHROMO_2,Chromo domain/shadow; no
descr,CUFF.15632.1
(69 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B5U9W2_LOTJA (tr|B5U9W2) Putative uncharacterized protein OS=Lot... 67 1e-09
B5U9V8_LOTJA (tr|B5U9V8) Putative uncharacterized protein OS=Lot... 67 1e-09
B5U9V7_LOTJA (tr|B5U9V7) Putative uncharacterized protein OS=Lot... 67 2e-09
B5U9W4_LOTJA (tr|B5U9W4) Putative uncharacterized protein OS=Lot... 67 2e-09
B5U9W1_LOTJA (tr|B5U9W1) Putative uncharacterized protein OS=Lot... 67 2e-09
B5U9W0_LOTJA (tr|B5U9W0) Putative uncharacterized protein OS=Lot... 67 2e-09
E5GBA8_CUCME (tr|E5GBA8) Ty3-gypsy retrotransposon protein OS=Cu... 57 2e-06
A5CAG1_VITVI (tr|A5CAG1) Putative uncharacterized protein OS=Vit... 55 6e-06
J3SDF5_BETVU (tr|J3SDF5) Ty3/gypsy retrotransposon protein OS=Be... 55 9e-06
>B5U9W2_LOTJA (tr|B5U9W2) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1369
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1274 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1333
Query: 62 KLLGG 66
L GG
Sbjct: 1334 NLQGG 1338
>B5U9V8_LOTJA (tr|B5U9V8) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1558
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1463 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522
Query: 62 KLLGG 66
L GG
Sbjct: 1523 NLQGG 1527
>B5U9V7_LOTJA (tr|B5U9V7) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1520
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1425 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1484
Query: 62 KLLGG 66
L GG
Sbjct: 1485 SLQGG 1489
>B5U9W4_LOTJA (tr|B5U9W4) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1558
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1463 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522
Query: 62 KLLGG 66
L GG
Sbjct: 1523 NLQGG 1527
>B5U9W1_LOTJA (tr|B5U9W1) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1558
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1463 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522
Query: 62 KLLGG 66
L GG
Sbjct: 1523 NLQGG 1527
>B5U9W0_LOTJA (tr|B5U9W0) Putative uncharacterized protein OS=Lotus japonicus PE=4
SV=1
Length = 1558
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 2 LNEELELEVAPEDVIDQREDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLEDKV 61
L EE EL+V PE ++D RE+ G+LEVLI+W++L T ++SWE + + D+FP LEDK+
Sbjct: 1463 LTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522
Query: 62 KLLGG 66
L GG
Sbjct: 1523 NLQGG 1527
>E5GBA8_CUCME (tr|E5GBA8) Ty3-gypsy retrotransposon protein OS=Cucumis melo
subsp. melo PE=4 SV=1
Length = 824
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MLNEELELEVAPEDVIDQ-REDSQGNLEVLIKWENLATHDNSWESAALIQDRFPLFPLED 59
+LN+++EL + P++V ++ + E L++W++ +H+ +WES A+++ +FP F LED
Sbjct: 732 ILNDQMELVLKPKNVTQLCWNKAKRDWEYLVQWKDQPSHEATWESYAMLRHQFPNFHLED 791
Query: 60 KVKLLGGG 67
KV LL GG
Sbjct: 792 KVALLHGG 799
>A5CAG1_VITVI (tr|A5CAG1) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_018166 PE=2 SV=1
Length = 1448
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 1 MLNEELELEVAPEDVIDQREDSQGN---LEVLIKWENLATHDNSWESAALIQDRFPLFPL 57
+L E+LE V P+ V+D + N +EVLI+W+ L + SWES I++ FP F L
Sbjct: 940 ILVEDLEWLVEPDQVLDIHQSPNNNQLGIEVLIQWKGLPQFEASWESVDTIKEHFPDFHL 999
Query: 58 EDKVKLL 64
EDKV LL
Sbjct: 1000 EDKVLLL 1006
>J3SDF5_BETVU (tr|J3SDF5) Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp.
vulgaris PE=4 SV=1
Length = 1631
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 2 LNEELELEVAPEDVIDQREDSQGN---LEVLIKWENLATHDNSWESAALIQDRFPLFPLE 58
++ ++EL V PE+++D R+ QG E LIKW+ L + +WE + I RFP F LE
Sbjct: 1532 IDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLE 1591
Query: 59 DKVKLLGGG 67
DKV + G G
Sbjct: 1592 DKVNVWGAG 1600