Miyakogusa Predicted Gene

Lj0g3v0233989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0233989.1 Non Chatacterized Hit- tr|B9SMG4|B9SMG4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,41.89,0.00000009, ,gene.g18299.t1.1
         (107 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SMG4_RICCO (tr|B9SMG4) Putative uncharacterized protein OS=Ric...    61   1e-07

>B9SMG4_RICCO (tr|B9SMG4) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1074840 PE=4 SV=1
          Length = 339

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 42/74 (56%)

Query: 34  RWLRPAEDTVKVNVDAVVGKDKLAGFGMVARDNAGEVLATAAKFPTIALSPTVADALSLR 93
           RW  P +   KVN DA + KD   GFG V RD +G+VL   A+   +  S  VA+AL++R
Sbjct: 211 RWQAPVKGMGKVNADAAIYKDGTTGFGCVVRDMSGKVLLAGARRVQMEGSTVVAEALTIR 270

Query: 94  WAMELSMHLGFRRV 107
           WA+E     G R +
Sbjct: 271 WALETICASGIRDI 284